Query 016455
Match_columns 389
No_of_seqs 596 out of 2592
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:52:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016455.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016455hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.3E-28 4.4E-33 210.8 10.6 132 2-141 18-152 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 3.2E-27 1.1E-31 217.4 10.3 160 2-188 67-229 (269)
3 4gpm_A Engineered protein OR26 99.9 1.4E-26 4.7E-31 198.1 10.3 139 27-189 7-148 (169)
4 2vge_A RELA-associated inhibit 99.9 1.2E-26 4.3E-31 208.3 8.8 175 4-189 1-200 (229)
5 3aji_A 26S proteasome non-ATPa 99.9 5.5E-26 1.9E-30 203.2 12.0 161 2-189 54-217 (231)
6 1oy3_D Transcription factor in 99.9 4.1E-26 1.4E-30 209.9 10.7 119 47-189 151-270 (282)
7 1s70_B 130 kDa myosin-binding 99.9 6.4E-26 2.2E-30 210.8 11.3 162 2-190 54-278 (299)
8 1yyh_A HN1;, notch 1, ankyrin 99.9 4.5E-26 1.5E-30 207.4 10.0 181 2-189 37-235 (253)
9 2rfa_A Transient receptor pote 99.9 3.4E-25 1.2E-29 198.4 13.4 170 2-189 17-209 (232)
10 2dzn_A Probable 26S proteasome 99.9 1.4E-25 4.8E-30 200.1 10.8 163 2-187 50-218 (228)
11 3b7b_A Euchromatic histone-lys 99.9 3.6E-25 1.2E-29 198.7 13.1 181 2-189 25-222 (237)
12 2f8y_A Notch homolog 1, transl 99.9 3.5E-25 1.2E-29 196.9 12.2 181 2-189 5-203 (223)
13 3hra_A Ankyrin repeat family p 99.9 2.4E-25 8.2E-30 194.7 10.8 162 2-189 19-190 (201)
14 2xai_A ASB-9, ankyrin repeat a 99.9 3.4E-25 1.2E-29 202.6 11.7 177 2-187 17-209 (261)
15 2etb_A Transient receptor pote 99.9 6.3E-25 2.2E-29 199.8 12.7 168 2-189 20-233 (256)
16 4b93_B Ankyrin repeat domain-c 99.9 4.1E-25 1.4E-29 203.3 10.5 163 2-188 25-196 (269)
17 1k1a_A B-cell lymphoma 3-encod 99.9 4.4E-25 1.5E-29 198.4 10.3 180 2-188 23-227 (241)
18 1yyh_A HN1;, notch 1, ankyrin 99.9 3.1E-25 1.1E-29 201.8 9.0 151 33-188 35-201 (253)
19 1sw6_A Regulatory protein SWI6 99.9 7.3E-26 2.5E-30 214.1 4.9 164 2-187 111-326 (327)
20 3b7b_A Euchromatic histone-lys 99.9 8E-25 2.7E-29 196.4 11.5 169 12-188 2-188 (237)
21 1oy3_D Transcription factor in 99.9 2.9E-25 1E-29 204.2 8.2 160 2-188 23-236 (282)
22 3v30_A DNA-binding protein rfx 99.9 1.3E-24 4.4E-29 185.6 11.4 132 2-141 16-151 (172)
23 2f8y_A Notch homolog 1, transl 99.9 3.2E-25 1.1E-29 197.2 7.8 149 35-188 5-169 (223)
24 3d9h_A CDNA FLJ77766, highly s 99.9 1.8E-24 6.3E-29 200.4 13.0 176 2-186 73-264 (285)
25 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.2E-24 4.1E-29 185.6 10.6 132 2-141 28-162 (169)
26 3utm_A Tankyrase-1; tankyrase, 99.9 2.2E-24 7.4E-29 204.3 12.1 132 2-141 72-263 (351)
27 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.5E-24 8.7E-29 181.7 10.6 132 2-141 19-153 (162)
28 1n11_A Ankyrin; clathrin, BAND 99.9 2.7E-24 9.4E-29 210.8 11.9 132 2-141 193-327 (437)
29 1awc_B Protein (GA binding pro 99.9 1.7E-24 6E-29 181.4 8.9 131 2-141 16-149 (153)
30 3v31_A Ankyrin repeat family A 99.9 2.5E-24 8.6E-29 182.9 9.8 132 2-141 17-151 (167)
31 3kea_A K1L; tropism, ANK repea 99.9 3.5E-24 1.2E-28 198.6 11.3 157 2-189 45-207 (285)
32 3jxi_A Vanilloid receptor-rela 99.9 6.4E-24 2.2E-28 193.5 12.3 176 3-189 24-237 (260)
33 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.7E-24 9.3E-29 194.1 9.1 169 2-189 19-193 (239)
34 1ikn_D Protein (I-kappa-B-alph 99.9 7.1E-25 2.4E-29 197.0 4.9 161 2-189 22-196 (236)
35 2xai_A ASB-9, ankyrin repeat a 99.9 8.9E-24 3E-28 193.1 11.9 162 3-187 84-248 (261)
36 3ljn_A Hypothetical protein; a 99.9 4.1E-24 1.4E-28 204.7 9.9 163 2-188 34-255 (364)
37 2rfm_A Putative ankyrin repeat 99.9 6.7E-24 2.3E-28 184.6 10.3 132 2-141 49-183 (192)
38 1k1a_A B-cell lymphoma 3-encod 99.9 1E-23 3.5E-28 189.4 11.4 170 15-188 3-194 (241)
39 3v31_A Ankyrin repeat family A 99.9 9.2E-24 3.2E-28 179.4 10.4 141 25-189 4-147 (167)
40 1ikn_D Protein (I-kappa-B-alph 99.9 5.4E-24 1.9E-28 191.2 9.4 160 2-186 59-228 (236)
41 2rfm_A Putative ankyrin repeat 99.9 7.6E-24 2.6E-28 184.3 9.8 149 14-189 28-179 (192)
42 1wdy_A 2-5A-dependent ribonucl 99.9 1.3E-23 4.5E-28 192.9 11.8 179 2-188 53-264 (285)
43 2dzn_A Probable 26S proteasome 99.9 7.7E-24 2.6E-28 188.7 9.9 161 2-188 16-185 (228)
44 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-23 6.1E-28 175.5 11.5 130 2-141 16-149 (156)
45 3aji_A 26S proteasome non-ATPa 99.9 7.2E-24 2.5E-28 189.4 9.6 160 2-188 20-183 (231)
46 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.8E-24 2.7E-28 180.5 9.2 143 23-189 13-158 (169)
47 4g8k_A 2-5A-dependent ribonucl 99.9 2.2E-23 7.6E-28 197.4 11.8 181 1-188 38-284 (337)
48 3f6q_A Integrin-linked protein 99.9 2.1E-23 7.2E-28 179.5 10.2 132 2-141 19-154 (179)
49 1awc_B Protein (GA binding pro 99.9 1.9E-23 6.5E-28 175.0 9.1 139 26-189 4-145 (153)
50 4hbd_A KN motif and ankyrin re 99.9 3.7E-24 1.3E-28 197.6 5.0 162 2-189 90-262 (276)
51 3twr_A Tankyrase-2; ankyrin re 99.9 4.2E-23 1.4E-27 175.0 10.9 131 2-141 22-156 (165)
52 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.2E-23 4.2E-28 177.5 7.4 143 23-189 4-149 (162)
53 1wdy_A 2-5A-dependent ribonucl 99.9 4.8E-23 1.6E-27 189.1 11.6 180 2-188 19-230 (285)
54 3utm_A Tankyrase-1; tankyrase, 99.9 4.7E-23 1.6E-27 195.1 11.9 116 2-125 38-157 (351)
55 1n11_A Ankyrin; clathrin, BAND 99.9 5.4E-23 1.8E-27 201.6 12.3 179 2-188 160-355 (437)
56 1d9s_A Cyclin-dependent kinase 99.9 1.6E-23 5.6E-28 172.0 7.0 122 11-141 2-127 (136)
57 3twr_A Tankyrase-2; ankyrin re 99.9 2E-23 6.8E-28 177.0 7.8 144 23-190 7-154 (165)
58 2fo1_E LIN-12 protein; beta-ba 99.9 1.5E-23 5E-28 201.9 7.8 178 3-188 148-357 (373)
59 3eu9_A Huntingtin-interacting 99.9 1.8E-22 6.1E-27 180.7 14.2 179 2-188 23-221 (240)
60 3c5r_A BARD-1, BRCA1-associate 99.9 3.4E-23 1.2E-27 170.2 8.4 122 11-141 1-125 (137)
61 3v30_A DNA-binding protein rfx 99.9 3E-23 1E-27 177.1 8.1 140 26-189 4-147 (172)
62 3hra_A Ankyrin repeat family p 99.9 6.6E-23 2.3E-27 179.2 10.0 133 2-141 53-194 (201)
63 2etb_A Transient receptor pote 99.9 3.3E-23 1.1E-27 188.4 8.2 137 1-141 59-237 (256)
64 3f6q_A Integrin-linked protein 99.9 4.1E-23 1.4E-27 177.6 8.3 141 24-188 5-149 (179)
65 2pnn_A Transient receptor pote 99.9 1.4E-22 4.8E-27 186.1 11.1 177 2-189 27-245 (273)
66 2fo1_E LIN-12 protein; beta-ba 99.9 6.8E-23 2.3E-27 197.2 9.3 179 3-188 108-324 (373)
67 1s70_B 130 kDa myosin-binding 99.9 3.7E-22 1.3E-26 185.4 13.6 135 2-141 12-155 (299)
68 4hbd_A KN motif and ankyrin re 99.9 1.8E-22 6E-27 186.3 11.1 132 2-141 125-266 (276)
69 2vge_A RELA-associated inhibit 99.9 2.3E-23 7.9E-28 186.9 4.7 137 2-142 35-205 (229)
70 1bd8_A P19INK4D CDK4/6 inhibit 99.9 8.4E-23 2.9E-27 171.3 7.6 139 25-189 3-145 (156)
71 3kea_A K1L; tropism, ANK repea 99.9 7.9E-23 2.7E-27 189.5 6.9 154 2-188 14-172 (285)
72 2rfa_A Transient receptor pote 99.9 2.8E-22 9.5E-27 179.3 10.0 136 2-141 51-213 (232)
73 3jxi_A Vanilloid receptor-rela 99.9 1.8E-22 6E-27 183.9 8.4 136 1-141 62-241 (260)
74 1bi7_B P16INK4A, MTS1, multipl 99.9 3.4E-23 1.2E-27 174.2 3.4 135 23-182 11-149 (156)
75 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-22 5.8E-27 165.9 7.1 115 22-141 12-129 (136)
76 3aaa_C Myotrophin, protein V-1 99.9 3.3E-22 1.1E-26 161.1 8.2 109 23-136 6-117 (123)
77 3c5r_A BARD-1, BRCA1-associate 99.9 2.2E-22 7.5E-27 165.3 7.2 120 44-188 1-120 (137)
78 1bi7_B P16INK4A, MTS1, multipl 99.9 8E-22 2.7E-26 165.8 10.2 122 2-132 26-151 (156)
79 1sw6_A Regulatory protein SWI6 99.9 3.5E-22 1.2E-26 188.8 8.9 128 2-136 145-327 (327)
80 3ljn_A Hypothetical protein; a 99.9 1.7E-22 6E-27 193.3 6.9 172 2-188 98-300 (364)
81 2pnn_A Transient receptor pote 99.9 2.1E-22 7.3E-27 184.9 6.8 137 1-141 70-249 (273)
82 3t8k_A Uncharacterized protein 99.9 1.1E-22 3.8E-27 176.5 4.0 131 2-141 20-170 (186)
83 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-21 4.1E-26 181.5 10.8 114 22-141 57-173 (285)
84 3t8k_A Uncharacterized protein 99.8 8.8E-22 3E-26 170.8 6.2 153 26-200 8-178 (186)
85 1ycs_B 53BP2, P53BP2; ankyrin 99.8 7E-22 2.4E-26 178.2 4.9 138 23-185 4-145 (239)
86 3deo_A Signal recognition part 99.8 6.8E-21 2.3E-25 164.5 10.4 109 23-137 43-155 (183)
87 4g8k_A 2-5A-dependent ribonucl 99.8 5.8E-21 2E-25 180.7 9.9 131 2-141 182-317 (337)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.8E-21 1.3E-25 154.6 7.2 113 24-141 2-117 (126)
89 3ui2_A Signal recognition part 99.8 1E-20 3.5E-25 171.3 10.7 107 23-135 44-154 (244)
90 1d9s_A Cyclin-dependent kinase 99.8 2.3E-20 7.9E-25 153.1 10.5 107 2-113 26-136 (136)
91 3eu9_A Huntingtin-interacting 99.8 1E-20 3.4E-25 169.2 8.4 133 2-141 56-193 (240)
92 2b0o_E UPLC1; arfgap, structur 99.8 2E-20 7E-25 174.6 9.8 126 2-138 165-299 (301)
93 3ehr_A Osteoclast-stimulating 99.8 4.7E-21 1.6E-25 170.5 5.1 117 23-143 72-191 (222)
94 2b0o_E UPLC1; arfgap, structur 99.8 1.1E-20 3.8E-25 176.4 7.7 134 25-188 152-297 (301)
95 3aaa_C Myotrophin, protein V-1 99.8 9.9E-21 3.4E-25 152.4 6.1 112 51-186 4-115 (123)
96 3jue_A Arfgap with coiled-coil 99.8 4.9E-20 1.7E-24 176.4 10.7 143 24-187 199-347 (368)
97 2jab_A H10-2-G3; HER2, darpin, 99.8 1.1E-19 3.9E-24 148.9 10.8 106 2-111 28-136 (136)
98 3deo_A Signal recognition part 99.8 1.5E-20 5.2E-25 162.3 4.5 114 51-189 41-155 (183)
99 1n0q_A 3ANK, 3 ankyrin repeats 99.8 7.7E-20 2.6E-24 139.7 6.0 84 53-141 1-84 (93)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.8 5.1E-19 1.7E-23 142.0 10.3 108 2-113 16-126 (126)
101 1dcq_A PYK2-associated protein 99.8 4.6E-19 1.6E-23 163.6 9.3 112 25-141 131-254 (278)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 9E-19 3.1E-23 133.7 8.7 89 24-113 2-93 (93)
103 3ehr_A Osteoclast-stimulating 99.8 1.4E-19 4.8E-24 160.9 4.2 116 49-188 68-184 (222)
104 3lvq_E ARF-GAP with SH3 domain 99.8 1.9E-18 6.4E-23 172.4 11.9 122 2-134 146-276 (497)
105 3lvq_E ARF-GAP with SH3 domain 99.8 5.7E-19 2E-23 176.2 8.1 111 26-141 134-256 (497)
106 3ui2_A Signal recognition part 99.8 7.2E-20 2.5E-24 165.6 0.8 113 51-188 42-155 (244)
107 2l6b_A NR1C; ankyrin, consensu 99.8 4.5E-19 1.6E-23 140.8 5.1 87 50-141 5-91 (115)
108 1dcq_A PYK2-associated protein 99.8 2.6E-18 9E-23 158.5 10.9 121 2-135 144-273 (278)
109 2l6b_A NR1C; ankyrin, consensu 99.7 7.6E-19 2.6E-23 139.5 5.8 102 23-129 8-112 (115)
110 3jue_A Arfgap with coiled-coil 99.7 5.2E-18 1.8E-22 162.3 10.6 132 2-136 214-348 (368)
111 2zgd_A 3 repeat synthetic anky 99.7 2.3E-18 8E-23 135.8 4.6 90 47-141 17-106 (110)
112 2aja_A Ankyrin repeat family p 99.7 6E-19 2.1E-23 169.4 -1.6 111 25-141 93-215 (376)
113 2aja_A Ankyrin repeat family p 99.7 9.5E-18 3.2E-22 161.0 1.1 127 2-141 106-241 (376)
114 2zgd_A 3 repeat synthetic anky 99.6 1.5E-15 5.2E-20 119.5 8.3 85 22-107 22-109 (110)
115 4ev6_A Magnesium transport pro 25.2 77 0.0026 28.7 4.9 21 290-310 281-301 (339)
116 2iub_A CORA, divalent cation t 20.7 69 0.0024 29.4 3.6 21 290-310 305-325 (363)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=1.3e-28 Score=210.76 Aligned_cols=132 Identities=23% Similarity=0.331 Sum_probs=123.6
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|+++.|+++|+|+|.+|. .+.+|+|.|+..+..+ .|+++|+|++.+|.+|+||||+|+..|+.+++++|+ +.|
T Consensus 18 ~~v~~Ll~~Gadvn~~d~---~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~g 93 (169)
T 4gpm_A 18 DRVKDLIENGADVNASDS---DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SKG 93 (169)
T ss_dssp HHHHHHHHTTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HCc
Confidence 789999999999999997 4557788888777655 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+++|.+|.+|+||||+|+++|+.+++++|+++|++ ++.+|.+|+||||+|++.++.+++
T Consensus 94 advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~g~~~iv 152 (169)
T 4gpm_A 94 ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNTSDSDGRTPLDLAREHGNEEVV 152 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999 999999999999999999998877
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=3.2e-27 Score=217.36 Aligned_cols=160 Identities=19% Similarity=0.186 Sum_probs=133.4
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCCh---hhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNA---SSVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~---~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+|+|.+|.+ +.+|||+|+..|.. ++|+++|++++.++.+|.||+|+|+..++.++++.|+ +.|
T Consensus 67 ~~v~~Ll~~Gadvn~~d~~---G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~g 142 (269)
T 4b93_B 67 KRLAKVPASGLGVNVTSQD---GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL-DSN 142 (269)
T ss_dssp --------CCCCTTCCCTT---SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcCCC---CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHH-HCC
Confidence 3678899999999999974 45778888777654 5899999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHH
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWY 158 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~ 158 (389)
++++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.+++ .+++..+
T Consensus 143 ~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~g~~~~v------~~Ll~~G---- 208 (269)
T 4b93_B 143 AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIEKHVFVV------ELLLLHG---- 208 (269)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHH------HHHHHTT----
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHcCCHHHH------HHHHHCC----
Confidence 99999999999999999999999999999999999 999999999999999999998877 2222111
Q ss_pred HHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 159 ERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 159 ~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
..++.+|++|+||+|+|++..
T Consensus 209 ---------ad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 209 ---------ASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp ---------CCSCCCCTTSCCSGGGSCTTC
T ss_pred ---------CCCCCcCCCCCCHHHHHHhCC
Confidence 115789999999999997643
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.4e-26 Score=198.12 Aligned_cols=139 Identities=24% Similarity=0.324 Sum_probs=123.1
Q ss_pred HHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHH
Q 016455 27 KIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEI 103 (389)
Q Consensus 27 ~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~i 103 (389)
.|+.|+..|..+ .|+++|+|+|.+|.+|+||||+|+..|+.++++.|+ ..|++++.+|.+|+||||+|+++|+.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 488888888766 899999999999999999999999999999999999 7899999999999999999999999999
Q ss_pred HHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHH
Q 016455 104 FELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEEL 183 (389)
Q Consensus 104 v~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~l 183 (389)
+++|+++|++ +|.+|.+|+||||+|++.|+.+++ .++++.+ ..++.+|++|+||+++
T Consensus 86 v~~Ll~~gad----vn~~d~~G~TpLh~A~~~g~~~~v------~~Ll~~g-------------ad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 86 VKLLISKGAD----VNAKDSDGRTPLHHAAENGHKEVV------KLLISKG-------------ADVNTSDSDGRTPLDL 142 (169)
T ss_dssp HHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTSCCHHHH
T ss_pred HHHHHHCcCC----CCCCCCCCCCHHHHHHHcCCHHHH------HHHHHcC-------------CCccccCCCCCCHHHH
Confidence 9999999999 999999999999999999988777 2222111 1157889999999999
Q ss_pred Hhhhhh
Q 016455 184 FATANN 189 (389)
Q Consensus 184 a~~~~~ 189 (389)
|.+.+.
T Consensus 143 A~~~g~ 148 (169)
T 4gpm_A 143 AREHGN 148 (169)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 987653
No 4
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=208.30 Aligned_cols=175 Identities=15% Similarity=-0.019 Sum_probs=136.3
Q ss_pred HHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCC
Q 016455 4 ARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQA 80 (389)
Q Consensus 4 v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 80 (389)
++.|+++|++++..+..+.++.++||.|+..|..+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ +.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI-TAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCC
Confidence 47899999999999988889999999999888766 889999999999999999999999999999999999 77999
Q ss_pred ccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccc-cCCcccchhc--cccCCCcccccCCChhHHhhHHHHH
Q 016455 81 VEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKID-NGGNTLLHMT--GIKRSDYVPEKMEGPALVLQEELLW 157 (389)
Q Consensus 81 ~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d-~~G~TpLh~A--~~~~~~~~~~~l~~~~l~l~~~~~~ 157 (389)
++.+|..|+||||+|+..|+.+++++|++.|++ ++.+| .+|+||||+| +..++.++++ ++++.+...
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~g~tpL~~A~a~~~~~~~~v~------~Ll~~ga~~ 149 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAA----IFATTLSDGATAFEKCDPYREGYADCAT------YLADVEQSM 149 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCSSTTCCTGGGCCTTSTTHHHHHH------HHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cccccCCCCCCHHHHHHHHhcChHHHHH------HHHHcCCCc
Confidence 999999999999999999999999999999998 89887 6999999999 8888888773 222222211
Q ss_pred HHHH----------------Hhhc---chhhhhhccCCCCChHHHHhhhhh
Q 016455 158 YERV----------------EEVS---IPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 158 ~~~v----------------~~~~---~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
...- +.+. ....++.+|.+|+||+++|++.+.
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~ 200 (229)
T 2vge_A 150 GLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQ 200 (229)
T ss_dssp TTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTE
T ss_pred ccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCC
Confidence 0000 0000 001145678899999999987643
No 5
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.93 E-value=5.5e-26 Score=203.25 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=125.7
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..|. .+.+|+|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 54 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 129 (231)
T 3aji_A 54 EIVEFLLQLGVPVNDKDD---AGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGG 129 (231)
T ss_dssp HHHHHHHHTTCCSCCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHhCCCCCCcCC---CCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 678888888888888776 4456677777666544 788888888888888888888888888888888888 678
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHH
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWY 158 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~ 158 (389)
.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++.
T Consensus 130 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~----- 194 (231)
T 3aji_A 130 ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEEA------KFLVTQ----- 194 (231)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHH------HHHHHT-----
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHHH------HHHHHC-----
Confidence 88888888888888888888888888888888887 888888888888888888876655 111111
Q ss_pred HHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 159 ERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 159 ~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
...++.+|.+|+||+++|.+.+.
T Consensus 195 --------ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 195 --------GASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp --------TCCSCCCCTTSCCHHHHSCHHHH
T ss_pred --------CCCCCCCCCCCCCHHHHHHhhHH
Confidence 11146789999999999976544
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=4.1e-26 Score=209.90 Aligned_cols=119 Identities=17% Similarity=0.197 Sum_probs=60.7
Q ss_pred CCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccC-CChHHHHHHHhCChHHHHHHHccCCcccccccccccCC
Q 016455 47 ESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE-GRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGG 125 (389)
Q Consensus 47 ~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G 125 (389)
++.+|..|.||||+|+..|+.+++++|+ +.|++++.++.. |+||||+|+.+|+.+++++|+++|++ ++.+|.+|
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g 225 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----PTARMYGG 225 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTS
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CcccccCC
Confidence 4455556666666666666666666666 455666666543 66666666666666666666666666 66666666
Q ss_pred cccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 126 NTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 126 ~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
+||||+|++.++.+++ .+++..+ ..++.+|.+|+||++++.....
T Consensus 226 ~tpL~~A~~~~~~~~v------~~Ll~~g-------------a~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 226 RTPLGSALLRPNPILA------RLLRAHG-------------APEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHTSSCHHHH------HHHHHTT-------------CCCCCCC---------------
T ss_pred CCHHHHHHHcCCcHHH------HHHHHcC-------------CCcCcCCCcccccccccCCccc
Confidence 6666666666655544 1111110 0145677777777777665443
No 7
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=6.4e-26 Score=210.84 Aligned_cols=162 Identities=18% Similarity=0.203 Sum_probs=136.5
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..|. .+.+|||.|+..+..+ +|+++|+++|.+|..|.||||+|+..|+.+++++|+ ..|
T Consensus 54 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~g 129 (299)
T 1s70_B 54 EEVLRLLERGADINYANV---DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI-SQG 129 (299)
T ss_dssp HHHHHHHHHCCCTTCBCT---TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCcccCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCC
Confidence 689999999999999886 4567899998888765 899999999999999999999999999999999999 667
Q ss_pred CCccccc------------------------------------------------------------cCCChHHHHHHHh
Q 016455 79 QAVEHID------------------------------------------------------------DEGRNILHVAIKY 98 (389)
Q Consensus 79 ~~~~~~d------------------------------------------------------------~~G~t~Lh~A~~~ 98 (389)
++++.+| ..|+||||+|+.+
T Consensus 130 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 130 AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 7776555 3577889999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCC
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGF 178 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ +|.+|.+|+||||+|+..++.+++ .+++..+ ..++.+|.+|+
T Consensus 210 g~~~~v~~Ll~~g~d----~~~~d~~g~tpL~~A~~~~~~~~v------~~Ll~~g-------------ad~~~~d~~g~ 266 (299)
T 1s70_B 210 GYTEVLKLLIQARYD----VNIKDYDGWTPLHAAAHWGKEEAC------RILVENL-------------CDMEAVNKVGQ 266 (299)
T ss_dssp TCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTSC
T ss_pred CcHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHhcCCHHHH------HHHHHcC-------------CCCCCcCCCCC
Confidence 999999999999998 999999999999999999988776 2222111 11578899999
Q ss_pred ChHHHHhhhhhh
Q 016455 179 TPEELFATANNE 190 (389)
Q Consensus 179 Tpl~la~~~~~~ 190 (389)
||+|+|.+...+
T Consensus 267 t~l~~A~~~~~~ 278 (299)
T 1s70_B 267 TAFDVADEDILG 278 (299)
T ss_dssp CTTTSCCSGGGH
T ss_pred CHHHHHHHHHHH
Confidence 999999765433
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.93 E-value=4.5e-26 Score=207.36 Aligned_cols=181 Identities=14% Similarity=0.158 Sum_probs=108.8
Q ss_pred HHHHHHHhCCCCCccc-cccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEIT-DSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~-d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|++++.. |. .+.+|||.|+..+..+ .|+++|++++.+|..|+||||+|+..|+.+++++|++..
T Consensus 37 ~~v~~Ll~~g~~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 37 AVISDFIYQGASLHNQTDR---TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp ---------------CCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred HHHHHHHHccCCcccccCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 5677777777776543 33 4556677777666544 677777777777777777777777777777777777444
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC-------------
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM------------- 144 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l------------- 144 (389)
+.+++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|.+|+||||+|+..++.++++.+
T Consensus 114 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 189 (253)
T 1yyh_A 114 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189 (253)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 447777777777777777777777777777777776 777777777777777777766655322
Q ss_pred CChhHHhhHHHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhhh
Q 016455 145 EGPALVLQEELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 145 ~~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
+..++.........+.++.+... ...+.+|..|+||+++|.+.+.
T Consensus 190 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 190 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 12233333222222222222211 1246789999999999987654
No 9
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.92 E-value=3.4e-25 Score=198.36 Aligned_cols=170 Identities=17% Similarity=0.168 Sum_probs=137.3
Q ss_pred HHHHHHHhC-CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCC-----CcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRR-DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGE-----SSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~-ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~-----n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
++++.|+++ |+++|.+|. .+.+|||.|+..+..+ .|+++|+++ +.+|.+|.||||+|+..|+.+++++
T Consensus 17 ~~v~~Ll~~~g~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 93 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRGA---MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRA 93 (232)
T ss_dssp HHHHHHHTTTCSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCC---CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHH
Confidence 689999998 999999986 5567899998888765 889999987 6778899999999999999999999
Q ss_pred HHHHCCCCcccccc-------------CCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCc
Q 016455 73 IFNVYPQAVEHIDD-------------EGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDY 139 (389)
Q Consensus 73 Ll~~~~~~~~~~d~-------------~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~ 139 (389)
|+ +.+++++.++. .|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+
T Consensus 94 Ll-~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 94 LL-ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD----IRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp HH-HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHTCSCHH
T ss_pred HH-hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCChH
Confidence 99 77889888765 799999999999999999999999999 9999999999999999998876
Q ss_pred ccccCCChhHHhhHHHHHHHHHHh-hcchhhhhhccCCCCChHHHHhhhhh
Q 016455 140 VPEKMEGPALVLQEELLWYERVEE-VSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 140 ~~~~l~~~~l~l~~~~~~~~~v~~-~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
++. ..+.+.-.... .......+.+|.+|+||+|+|++.+.
T Consensus 169 ~~~----------~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 169 FAC----------QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHH----------HHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHH----------HHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 541 00011100000 00011126789999999999987643
No 10
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.92 E-value=1.4e-25 Score=200.08 Aligned_cols=163 Identities=18% Similarity=0.154 Sum_probs=114.5
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcC--CCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHH
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKG--IGESSANDNAETPLFLATKSGCIEIVKEIFNV 76 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~g--a~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~ 76 (389)
|++++|+++|++++.....+..+.+|+|.|+..+..+ .|+++| ++++.+|..|.||||+|+..|+.+++++|+ +
T Consensus 50 ~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~ 128 (228)
T 2dzn_A 50 EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-E 128 (228)
T ss_dssp HHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-H
T ss_pred HHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHH-H
Confidence 5677788777554443322235556677776666544 677777 777777777888888888888888888777 5
Q ss_pred CCCCccccccCCChHHHHHHHhCChHHHHHHHccC-CcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHH
Q 016455 77 YPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQME-VPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEEL 155 (389)
Q Consensus 77 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~ 155 (389)
.|++++.+|..|+||||+|+..|+.+++++|++.| ++ ++.+|.+|+||||+|+..++.+++ .+++.
T Consensus 129 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~~~~~~v------~~Ll~--- 195 (228)
T 2dzn_A 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA----VNWQDKQGWTPLFHALAEGHGDAA------VLLVE--- 195 (228)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC----SCCCCTTSCCHHHHHHHTTCHHHH------HHHHH---
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc----ccCcCCCCCCHHHHHHHcCCHHHH------HHHHH---
Confidence 67777777878888888888888888888888777 66 777788888888888877776655 11110
Q ss_pred HHHHHHHhhcchhhhhhccCCCCChHHHHhhh
Q 016455 156 LWYERVEEVSIPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 156 ~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~ 187 (389)
+ .....+.+|.+|+||+|+|.+.
T Consensus 196 -------~--~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 196 -------K--YGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp -------H--HCCCSCCBCTTSCBGGGGCSST
T ss_pred -------h--cCCCCCccCCCCCcHHHHHHHH
Confidence 0 0112578899999999999653
No 11
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.92 E-value=3.6e-25 Score=198.72 Aligned_cols=181 Identities=17% Similarity=0.213 Sum_probs=137.4
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..+. .+.+|+|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..+
T Consensus 25 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 25 DICHMLVQAGANIDTCSE---DQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHHTTCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCCcCccCC---CCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 688999999999888886 4557788888777655 7888999999999999999999999999999999995555
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC-------------C
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM-------------E 145 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l-------------~ 145 (389)
.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+ +
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 177 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD----INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHG 177 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTC
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCC
Confidence 88888899999999999999999999999999888 888899999999999988877766332 1
Q ss_pred ChhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCCChHHHHhhhhh
Q 016455 146 GPALVLQEELLWYERVEEVSI-PHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 146 ~~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
..++.........+.++.+.. ....+.+|++|+||+|+|...+.
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 178 DSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 223333322222222222221 12246778889999998887654
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.92 E-value=3.5e-25 Score=196.93 Aligned_cols=181 Identities=14% Similarity=0.158 Sum_probs=96.7
Q ss_pred HHHHHHHhCCCCCccc-cccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEIT-DSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~-d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
|++++|+++|++++.. |. .+.+|||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 5 ~~i~~Ll~~g~~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 81 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQTDR---TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81 (223)
T ss_dssp CCEETTEETTCCTTCCCTT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBT
T ss_pred HHHHHHHHcCCCcccccCC---CCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 3455556666655443 22 3445555555555443 555566666666666666666666666666666666433
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC-------------
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM------------- 144 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l------------- 144 (389)
+.+++..|..|+||||+|+..++.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+
T Consensus 82 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 157 (223)
T 2f8y_A 82 ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 157 (223)
T ss_dssp TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC----CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 335555566666666666666666666666666555 556666666666666655555444221
Q ss_pred CChhHHhhHHHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhhh
Q 016455 145 EGPALVLQEELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 145 ~~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
+..++.........+.++.+... ...+.+|..|+||+++|.+.+.
T Consensus 158 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 158 EETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 11122222111111222211111 1246778889999998887543
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.92 E-value=2.4e-25 Score=194.75 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=136.3
Q ss_pred HHHHHHHhCCC-CCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDT-SWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga-~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+.++.|++++. ++|..|. .+.+|||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 19 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 95 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVDT---EGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95 (201)
T ss_dssp HHHHHHHTCTTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 56788888765 9998886 4557788888777655 899999999999999999999999999999999999888
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccC-CcccccccccccCCcccchhccccCCC-----cccccCCChhHHh
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQME-VPMRRLVRKIDNGGNTLLHMTGIKRSD-----YVPEKMEGPALVL 151 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLh~A~~~~~~-----~~~~~l~~~~l~l 151 (389)
+.+++..|..|+||||+|+..|+.+++++|+++| ++ ++.+|.+|+||||+|+..++. +++ .+++
T Consensus 96 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~~~v------~~Ll 165 (201)
T 3hra_A 96 TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED----IDFQNDFGYTALIEAVGLREGNQLYQDIV------KLLM 165 (201)
T ss_dssp CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC----TTCCCTTSCCHHHHHHHSSCCSHHHHHHH------HHHH
T ss_pred CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----cCCCCCCCCCHHHHHHHhccchhhHHHHH------HHHH
Confidence 9999999999999999999999999999999998 77 999999999999999988762 222 1110
Q ss_pred hHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 152 QEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 152 ~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
+ . ...++.+|.+|+||+|+|.+.+.
T Consensus 166 ~-----------~--ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 166 E-----------N--GADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp H-----------T--TCCTTCCCTTSCCHHHHHHHHTC
T ss_pred H-----------C--CCCCCccCCCCCCHHHHHHHcCC
Confidence 0 0 11257789999999999987643
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=202.55 Aligned_cols=177 Identities=16% Similarity=0.104 Sum_probs=137.2
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..|. .+.+|||.|+..+..+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ +.+
T Consensus 17 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 92 (261)
T 2xai_A 17 LSLRNLISQGWAVNIITA---DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHG 92 (261)
T ss_dssp HHHHHHHHTTCCSSCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCC
Confidence 789999999999999886 4557788888777655 889999999999999999999999999999999999 778
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC------------CC
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM------------EG 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l------------~~ 146 (389)
++++. +.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+ +.
T Consensus 93 ~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~ 167 (261)
T 2xai_A 93 ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD 167 (261)
T ss_dssp CCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTB
T ss_pred CCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC
Confidence 88875 45699999999999999999999999998 999999999999999998887766332 12
Q ss_pred hhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCCChHHHHhhh
Q 016455 147 PALVLQEELLWYERVEEVSI-PHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 147 ~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~Tpl~la~~~ 187 (389)
.++.........+.++.+.. ....+.+|.+|+||+|+|.+.
T Consensus 168 t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 168 SPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred ChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 23333322222222222211 112467788888888888753
No 15
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.92 E-value=6.3e-25 Score=199.81 Aligned_cols=168 Identities=18% Similarity=0.142 Sum_probs=132.4
Q ss_pred HHHHHHHhCCCCCcc----ccccCCCCcHHHHHccCC---C---ChhhHhhcCCCCCcC-----------CCCCCcHHHH
Q 016455 2 ELARFLIRRDTSWEI----TDSFQDQSKPKIHRYGAN---P---NASSVDQKGIGESSA-----------NDNAETPLFL 60 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~----~d~~~~~~~~~lh~a~~~---~---~~~~Ll~~ga~~n~~-----------d~~G~tpLh~ 60 (389)
+++++|+++|+++|. .|. .+.+|||.|+.. + .+++|+++|++++.. |..|.||||+
T Consensus 20 ~ll~~l~~~g~~i~~~~~~~d~---~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~ 96 (256)
T 2etb_A 20 GLLEYLRWNSKYLTDSAYTEGS---TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHI 96 (256)
T ss_dssp THHHHHHHHTCCTTSGGGSBTT---TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHH
T ss_pred HHHHHHHHcCCCcccccccCCC---CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHH
Confidence 467888899999998 675 556778888655 4 466999999887633 4779999999
Q ss_pred HHHcCcHHHHHHHHHHCCCCccccccC-------------CChHHHHHHHhCChHHHHHHHc---cCCcccccccccccC
Q 016455 61 ATKSGCIEIVKEIFNVYPQAVEHIDDE-------------GRNILHVAIKYRQLEIFELVVQ---MEVPMRRLVRKIDNG 124 (389)
Q Consensus 61 Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~~~~~iv~~Ll~---~g~~~~~~~~~~d~~ 124 (389)
|+..|+.+++++|+ +.|++++.+|.. |+||||+|+..|+.+++++|++ .|++ +|.+|.+
T Consensus 97 A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~----~n~~d~~ 171 (256)
T 2etb_A 97 AIEKRSLQCVKLLV-ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS----LEATDSL 171 (256)
T ss_dssp HHHTTCHHHHHHHH-HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCCTT
T ss_pred HHHcCCHHHHHHHH-HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----cCccCCC
Confidence 99999999999999 779999999887 9999999999999999999999 8998 9999999
Q ss_pred Ccccchhccc--cCCCc-------ccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 125 GNTLLHMTGI--KRSDY-------VPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 125 G~TpLh~A~~--~~~~~-------~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
|+||||+|+. .++.+ ++ .+++..+... .......+.+|.+|+||+|+|++.+.
T Consensus 172 g~TpLh~A~~~~~~~~~~~~~~~~iv------~~Ll~~ga~~------~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 172 GNTVLHALVMIADNSPENSALVIHMY------DGLLQMGARL------CPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp SCCHHHHHHHHCCSCHHHHHHHHHHH------HHHHHHHHHH------STTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcccCCchhhHHHHHHH------HHHHHcCCCc------ccccccccccCCCCCCHHHHHHHhCC
Confidence 9999999998 55544 33 1122211110 00001127889999999999988654
No 16
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.92 E-value=4.1e-25 Score=203.26 Aligned_cols=163 Identities=17% Similarity=0.183 Sum_probs=119.0
Q ss_pred HHHHHHHhCCCCCccc-----cccCCCCcHHHHHccCCCC----hhhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEIT-----DSFQDQSKPKIHRYGANPN----ASSVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~-----d~~~~~~~~~lh~a~~~~~----~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
|++++|++.|++.... +.....+.+|+|.++..+. ++.|+++|+|+|.+|.+|+||||+|+..|+.+++++
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 104 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPL 104 (269)
T ss_dssp HHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 7899999999763211 1112356788998876654 457899999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhh
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQ 152 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~ 152 (389)
|+ ..+++++.++.+|.||+|+|+..++.+++++|++.|++ +|.+|.+|+||||+|+..|+.+++ .++++
T Consensus 105 Ll-~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~----~n~~d~~g~TpL~~A~~~g~~~~v------~~Ll~ 173 (269)
T 4b93_B 105 LL-KHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAK----PNKKDLSGNTPLIYACSGGHHELV------ALLLQ 173 (269)
T ss_dssp HH-HTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTTCCCHHHHHHHTTCGGGH------HHHHH
T ss_pred HH-hcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHCCCHHHH------HHHHH
Confidence 99 78999999999999999999999999999999999998 999999999999999999998887 22221
Q ss_pred HHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 153 EELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 153 ~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
.+ ..++.+|.+|.||+|+|+..+
T Consensus 174 ~g-------------advn~~~~~g~t~Lh~A~~~g 196 (269)
T 4b93_B 174 HG-------------ASINASNNKGNTALHEAVIEK 196 (269)
T ss_dssp TT-------------CCTTCBCTTSCBHHHHHHHTT
T ss_pred CC-------------CCCCccccCCCcHHHHHHHcC
Confidence 11 125788999999999998754
No 17
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.92 E-value=4.4e-25 Score=198.39 Aligned_cols=180 Identities=14% Similarity=0.116 Sum_probs=102.6
Q ss_pred HHHHHHHh----CCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHH
Q 016455 2 ELARFLIR----RDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 e~v~~Ll~----~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
|++++|++ .|+++|..|. .+.+|||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.++++.|+
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 99 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYNN---LRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL 99 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccc---cCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 44555554 5666666664 3345566665555443 566666666666666666666666666666666666
Q ss_pred HHCC---CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccc-cCCcccchhccccCCCcccccC------
Q 016455 75 NVYP---QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKID-NGGNTLLHMTGIKRSDYVPEKM------ 144 (389)
Q Consensus 75 ~~~~---~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d-~~G~TpLh~A~~~~~~~~~~~l------ 144 (389)
+... .+++..|..|+||||+|+..|+.+++++|++.|++ ++.+| .+|+||||+|+..++.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 100 DSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD----IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC----cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3322 15566666666666666666666666666666665 56555 5666666666666655544222
Q ss_pred -------CChhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCCChHHHHhhhh
Q 016455 145 -------EGPALVLQEELLWYERVEEVSI-PHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 145 -------~~~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+..++.........+.++.+.. ....+.+|.+|+||+|+|.+.+
T Consensus 176 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 1122222222222222222211 1124778899999999988754
No 18
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.91 E-value=3.1e-25 Score=201.82 Aligned_cols=151 Identities=19% Similarity=0.170 Sum_probs=106.0
Q ss_pred CCCChhhHhhcCCCCCc-CCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccC
Q 016455 33 ANPNASSVDQKGIGESS-ANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQME 111 (389)
Q Consensus 33 ~~~~~~~Ll~~ga~~n~-~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g 111 (389)
..+.++.|+++|++++. .|.+|+||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 35 ~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 113 (253)
T 1yyh_A 35 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 113 (253)
T ss_dssp -----------------CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHST
T ss_pred ChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 34456689999999954 5899999999999999999999999 789999999999999999999999999999999998
Q ss_pred C-cccccccccccCCcccchhccccCCCcccccC-------------CChhHHhhHHHHHHHHHHhhcch-hhhhhccCC
Q 016455 112 V-PMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM-------------EGPALVLQEELLWYERVEEVSIP-HFRNHRNNM 176 (389)
Q Consensus 112 ~-~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l-------------~~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~ 176 (389)
. + ++.+|.+|+||||+|+..++.++++.+ +..++.........+.++.+... ...+.+|.+
T Consensus 114 ~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 189 (253)
T 1yyh_A 114 ATD----LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNR 189 (253)
T ss_dssp TSC----TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCC----ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 7 5 899999999999999999988877433 22334333333333333332221 224677888
Q ss_pred CCChHHHHhhhh
Q 016455 177 GFTPEELFATAN 188 (389)
Q Consensus 177 g~Tpl~la~~~~ 188 (389)
|+||+|+|++.+
T Consensus 190 g~tpL~~A~~~~ 201 (253)
T 1yyh_A 190 EETPLFLAAREG 201 (253)
T ss_dssp SCCHHHHHHHHT
T ss_pred CCCHHHHHHHCC
Confidence 999999887653
No 19
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.91 E-value=7.3e-26 Score=214.15 Aligned_cols=164 Identities=16% Similarity=0.138 Sum_probs=132.7
Q ss_pred HHHHHHHhCCCCCcc-ccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCc---HHHHHHHH
Q 016455 2 ELARFLIRRDTSWEI-TDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGC---IEIVKEIF 74 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~-~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~---~~~v~~Ll 74 (389)
+++++|++.|+++|. .|. .+.+|||+|+..+..+ +|+++|+++|.+|.+|+||||+|+..|+ .++++.|+
T Consensus 111 ~~~~~l~~~g~dvn~~~d~---~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDE---HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHCTTSCCCSCSCCST---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred HHHHHHHhcCCCcccccCC---CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 578899999999999 786 5668899998888765 8999999999999999999999999999 78888888
Q ss_pred HHCCCCccccccCCChHHHHHHH----hCChHHHHHHHccCC--------------------ccc---------------
Q 016455 75 NVYPQAVEHIDDEGRNILHVAIK----YRQLEIFELVVQMEV--------------------PMR--------------- 115 (389)
Q Consensus 75 ~~~~~~~~~~d~~G~t~Lh~A~~----~~~~~iv~~Ll~~g~--------------------~~~--------------- 115 (389)
+...++++.+|..|+||||+|++ .|+.+++++|++.+. +.+
T Consensus 188 ~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~ 267 (327)
T 1sw6_A 188 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 267 (327)
T ss_dssp HHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred HhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH
Confidence 66567899999999999999999 899999999997732 200
Q ss_pred ------ccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhh
Q 016455 116 ------RLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 116 ------~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~ 187 (389)
..+|.+|.+|+||||+|++.|+.+++ .+++..+ ..++.+|.+|+||+|+|++.
T Consensus 268 ~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v------~~Ll~~G-------------ad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 268 LKWIIANMLNAQDSNGDTCLNIAARLGNISIV------DALLDYG-------------ADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHH------HHHHHTT-------------CCTTCCCTTSCCGGGGTCC-
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHH------HHHHHcC-------------CCCcccCCCCCCHHHHHHhc
Confidence 02778888888888888888887766 2221111 11578999999999998764
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=8e-25 Score=196.44 Aligned_cols=169 Identities=19% Similarity=0.199 Sum_probs=133.3
Q ss_pred CCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCC
Q 016455 12 TSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEG 88 (389)
Q Consensus 12 a~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G 88 (389)
.+++..|. .+.+++|.|+..|..+ .|+++|++++..|.+|.||||+|+..|+.+++++|+ +.|++++.+|..|
T Consensus 2 ~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g 77 (237)
T 3b7b_A 2 MNFKMEHQ---NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEG 77 (237)
T ss_dssp CCCCCSSC---CSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTS
T ss_pred CCcccccC---CCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCC
Confidence 35666665 5567888888887765 889999999999999999999999999999999999 7899999999999
Q ss_pred ChHHHHHHHhCChHHHHHHHccC-CcccccccccccCCcccchhccccCCCcccccC-------------CChhHHhhHH
Q 016455 89 RNILHVAIKYRQLEIFELVVQME-VPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM-------------EGPALVLQEE 154 (389)
Q Consensus 89 ~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l-------------~~~~l~l~~~ 154 (389)
+||||+|+..|+.+++++|++.| .+ ++.+|..|+||||+|+..++.++++.+ +...+.....
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 153 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMD----VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAF 153 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCC----cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHH
Confidence 99999999999999999999998 66 899999999999999999887776432 1223333322
Q ss_pred HHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhh
Q 016455 155 LLWYERVEEVSIP-HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 155 ~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~ 188 (389)
....+.++.+... ..++.+|.+|+||+|+|.+.+
T Consensus 154 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 154 SGCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp HCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 2222333332221 224677888999999888654
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.91 E-value=2.9e-25 Score=204.17 Aligned_cols=160 Identities=20% Similarity=0.202 Sum_probs=134.2
Q ss_pred HHHHHHHhCCCC---CccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 016455 2 ELARFLIRRDTS---WEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFN 75 (389)
Q Consensus 2 e~v~~Ll~~ga~---vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~ 75 (389)
+++++|+++|++ +|.+|. .+.+|||.|+..+..+ .|+++|++++.+|..|+||||+|+..|+.+++++|+
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll- 98 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQND---LGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL- 98 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHS-
T ss_pred HHHHHHHhcCCCcccccccCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhh-
Confidence 689999999998 556664 6668899888877655 899999999999999999999999999999999999
Q ss_pred HCCC-----------------------------------------------CccccccCCChHHHHHHHhCChHHHHHHH
Q 016455 76 VYPQ-----------------------------------------------AVEHIDDEGRNILHVAIKYRQLEIFELVV 108 (389)
Q Consensus 76 ~~~~-----------------------------------------------~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll 108 (389)
..+. +++.+|..|+||||+|+..|+.+++++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 178 (282)
T 1oy3_D 99 QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178 (282)
T ss_dssp SSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 4443 36778999999999999999999999999
Q ss_pred ccCCcccccccccccC-CcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhh
Q 016455 109 QMEVPMRRLVRKIDNG-GNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 109 ~~g~~~~~~~~~~d~~-G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~ 187 (389)
++|++ ++.+|.. |+||||+|+..++.+++ .+++..+ ..++.+|.+|+||+|+|.+.
T Consensus 179 ~~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v------~~Ll~~g-------------ad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 179 DAGAD----LNKPEPTCGRTPLHLAVEAQAASVL------ELLLKAG-------------ADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHTCC----TTCCCTTTCCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTSCCHHHHHHTS
T ss_pred HcCCC----CCCCCCCCCcCHHHHHHHcCCHHHH------HHHHHcC-------------CCCcccccCCCCHHHHHHHc
Confidence 99998 8988854 99999999999987776 2221111 11578899999999999875
Q ss_pred h
Q 016455 188 N 188 (389)
Q Consensus 188 ~ 188 (389)
+
T Consensus 236 ~ 236 (282)
T 1oy3_D 236 P 236 (282)
T ss_dssp S
T ss_pred C
Confidence 4
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=1.3e-24 Score=185.62 Aligned_cols=132 Identities=14% Similarity=0.116 Sum_probs=121.8
Q ss_pred HHHHHHHhCCCC-CccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTS-WEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~-vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|+++|.+ +|..|. .+.+|||.|+..+..+ +|+++|++++.+|..|.||||+|+..|+.+++++|+ +.
T Consensus 16 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 91 (172)
T 3v30_A 16 DQLKEHLRKGDNLVNKPDE---RGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL-ER 91 (172)
T ss_dssp HHHHHHHTTCSGGGGCCCT---TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TT
T ss_pred HHHHHHHHcCcccccCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-Hc
Confidence 688999999877 677775 5668899998888765 889999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 92 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 92 DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD----LTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHhCcHHHH
Confidence 999999999999999999999999999999999998 999999999999999999988777
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=3.2e-25 Score=197.21 Aligned_cols=149 Identities=18% Similarity=0.166 Sum_probs=101.2
Q ss_pred CChhhHhhcCCCCCcC-CCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCC-
Q 016455 35 PNASSVDQKGIGESSA-NDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEV- 112 (389)
Q Consensus 35 ~~~~~Ll~~ga~~n~~-d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~- 112 (389)
+.++.|+++|++++.. |.+|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 5 ~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 83 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 83 (223)
T ss_dssp CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS
T ss_pred HHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 4556778888888654 778888888888888888888888 6678888888888888888888888888888888776
Q ss_pred cccccccccccCCcccchhccccCCCcccccC-------------CChhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCC
Q 016455 113 PMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM-------------EGPALVLQEELLWYERVEEVSI-PHFRNHRNNMGF 178 (389)
Q Consensus 113 ~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l-------------~~~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~ 178 (389)
+ ++.+|.+|+||||+|+..++.++++.+ +...+.........+.++.+.. ....+.+|.+|.
T Consensus 84 ~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 84 D----LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp C----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred C----cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCc
Confidence 4 777888888888888887776665322 1122332222222222222211 112456677777
Q ss_pred ChHHHHhhhh
Q 016455 179 TPEELFATAN 188 (389)
Q Consensus 179 Tpl~la~~~~ 188 (389)
||+++|++.+
T Consensus 160 t~L~~A~~~~ 169 (223)
T 2f8y_A 160 TPLFLAAREG 169 (223)
T ss_dssp CHHHHHHHHT
T ss_pred CHHHHHHHcC
Confidence 8887776543
No 24
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=200.44 Aligned_cols=176 Identities=16% Similarity=0.090 Sum_probs=136.3
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..|. .+.+|||.|+..+..+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ +.+
T Consensus 73 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 148 (285)
T 3d9h_A 73 LSLRNLISQGWAVNIITA---DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHG 148 (285)
T ss_dssp HHHHHHHHTTCCSCEECT---TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcCC---CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHH-HCC
Confidence 689999999999999886 4557888888877655 889999999999999999999999999999999999 678
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC------------CC
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM------------EG 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l------------~~ 146 (389)
.+++.. .+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+ +.
T Consensus 149 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~ 223 (285)
T 3d9h_A 149 ASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD 223 (285)
T ss_dssp CCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTB
T ss_pred CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC
Confidence 887754 4599999999999999999999999988 899999999999999999887776332 11
Q ss_pred hhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCCChHHHHhh
Q 016455 147 PALVLQEELLWYERVEEVSI-PHFRNHRNNMGFTPEELFAT 186 (389)
Q Consensus 147 ~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~Tpl~la~~ 186 (389)
.++.........+.++.+.. ...++.+|.+|+||+|+|.+
T Consensus 224 t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 224 SPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 22332222222222222221 11246778888888888874
No 25
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=1.2e-24 Score=185.58 Aligned_cols=132 Identities=23% Similarity=0.287 Sum_probs=123.1
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..|. .+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 28 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 103 (169)
T 2y1l_E 28 DEVRILMANGADVNAEDA---SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KNG 103 (169)
T ss_dssp HHHHHHHHTTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 789999999999999886 5567899898888765 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
++++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++.++.+++
T Consensus 104 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 104 ADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999998 999999999999999999987766
No 26
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.91 E-value=2.2e-24 Score=204.34 Aligned_cols=132 Identities=14% Similarity=0.170 Sum_probs=82.1
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..|. .+.+|||.|+..+..+ +|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 72 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 147 (351)
T 3utm_A 72 RIVQLLLQHGADVHAKDK---GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL-SHG 147 (351)
T ss_dssp HHHHHHHHTTCCTTCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCccCC---CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 567777777777777765 3445666666666544 677777777777777777777777777777777776 444
Q ss_pred CCccccc------------------------------------------------------cCCChHHHHHHHh---CCh
Q 016455 79 QAVEHID------------------------------------------------------DEGRNILHVAIKY---RQL 101 (389)
Q Consensus 79 ~~~~~~d------------------------------------------------------~~G~t~Lh~A~~~---~~~ 101 (389)
++++..| ..|+||||+|+.. ++.
T Consensus 148 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 227 (351)
T 3utm_A 148 ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227 (351)
T ss_dssp CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence 4443322 2334445555544 224
Q ss_pred HHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 102 EIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 102 ~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+++++|++.|++ +|.+|.+|+||||+|++.++.+++
T Consensus 228 ~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~g~~~~v 263 (351)
T 3utm_A 228 QVAELLLRKGAN----VNEKNKDFMTPLHVAAERAHNDVM 263 (351)
T ss_dssp HHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCC----cCCcCCCCCCHHHHHHHcCCHHHH
Confidence 455555555555 666677777777777766666555
No 27
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=2.5e-24 Score=181.73 Aligned_cols=132 Identities=16% Similarity=0.242 Sum_probs=121.6
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..|. .+.+++|.|+. +..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 19 ~~v~~Ll~~~~~~~~~~~---~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 93 (162)
T 1ihb_A 19 EQLTSLLQNNVNVNAQNG---FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL-EFQ 93 (162)
T ss_dssp HHHHHHTTSCCCTTCCCT---TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHhCCCCccccCc---cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 789999999999998886 55678999888 7655 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
.+++.+|.+|+||||+|++.|+.+++++|+++|++ .++.+|.+|+||||+|+..++.+++
T Consensus 94 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 94 ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999986 2589999999999999999988776
No 28
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.91 E-value=2.7e-24 Score=210.80 Aligned_cols=132 Identities=18% Similarity=0.198 Sum_probs=70.8
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+. .+.+|+|.|+..+..+ .|+++|++++..|..|.||||+|+..|+.+++++|+ ..+
T Consensus 193 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~ 268 (437)
T 1n11_A 193 DIVKLLLPRGGSPHSPAW---NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL-SKQ 268 (437)
T ss_dssp HHHHHHGGGTCCSCCCCT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTT
T ss_pred HHHHHHHhCCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-hcC
Confidence 455555555555555443 2334455555444433 455555555555555555555555555555555555 445
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
++++..|..|+||||+|++.|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++
T Consensus 269 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~g~~~~v 327 (437)
T 1n11_A 269 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM----VDATTRMGYTPLHVASHYGNIKLV 327 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCCCSSCCCHHHHHHHSSCSHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc----CCCCCCCCCCHHHHHHHcCcHHHH
Confidence 55555555555555555555555555555555554 555555555555555555554444
No 29
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=1.7e-24 Score=181.38 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=120.4
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++ .+. .+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 16 ~~v~~Ll~~g~~~~-~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 90 (153)
T 1awc_B 16 DEVRILMANGAPFT-TDW---LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-KHG 90 (153)
T ss_dssp HHHHHHHHHTCCCC-CCT---TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-TTT
T ss_pred HHHHHHHHcCCCCC-cCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-HcC
Confidence 68999999999876 343 5668899998887655 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 91 ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999998 999999999999999999987766
No 30
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=2.5e-24 Score=182.92 Aligned_cols=132 Identities=16% Similarity=0.130 Sum_probs=122.8
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|++.|+++|..|. .+.+|+|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 17 ~~v~~ll~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 92 (167)
T 3v31_A 17 LYLATRIEQENVINHTDE---EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL-DCG 92 (167)
T ss_dssp HHHHHHHHHSSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHT
T ss_pred HHHHHHHHcCCCcCCCCC---CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-HCC
Confidence 689999999999999886 5567889888887765 889999999999999999999999999999999999 678
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 93 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 93 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999998 999999999999999999988777
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=3.5e-24 Score=198.62 Aligned_cols=157 Identities=17% Similarity=0.169 Sum_probs=77.7
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..| +.+|||.|+..+..+ +|+++|++++.+|..|+||||+|+..|+.+++++|+ +.|
T Consensus 45 ~~v~~Ll~~g~~~~~~~-----g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g 118 (285)
T 3kea_A 45 RLVCTLLNAGALKNLLE-----NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFV-KKN 118 (285)
T ss_dssp HHHHHHHHTTGGGSCCT-----TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHC
T ss_pred HHHHHHHhCCCCCCCCC-----CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-hcC
Confidence 34445555554444432 233444444444332 444455555555555555555555555555555555 334
Q ss_pred CCccccccCC-ChHHHHHHHhCChHHHHHHHccCCccccccccccc-CCcccchhccccCCCcccccCCChhHHhhHHHH
Q 016455 79 QAVEHIDDEG-RNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVPEKMEGPALVLQEELL 156 (389)
Q Consensus 79 ~~~~~~d~~G-~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~ 156 (389)
++++.+|..| +||||+|+..|+.+++++|+++|++ . .|. +|+||||+|+..++.+++ .+++..
T Consensus 119 a~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~----~--~~~~~g~t~L~~A~~~g~~~~v------~~Ll~~--- 183 (285)
T 3kea_A 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS----T--FDLAILLSCIHITIKNGHVDMM------ILLLDY--- 183 (285)
T ss_dssp GGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT----T--CCCSTHHHHHHHHHHTTCHHHH------HHHHHH---
T ss_pred CCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc----c--ccccCCccHHHHHHHcChHHHH------HHHHHc---
Confidence 4455555444 4555555555555555555554433 1 111 445555555554444433 111111
Q ss_pred HHHHHHhhcchhhhhhccCCCCCh-HHHHhhhhh
Q 016455 157 WYERVEEVSIPHFRNHRNNMGFTP-EELFATANN 189 (389)
Q Consensus 157 ~~~~v~~~~~~~~~~~~n~~g~Tp-l~la~~~~~ 189 (389)
...++.+|.+|+|| +|+|.+.+.
T Consensus 184 ----------gad~n~~~~~g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 184 ----------MTSTNTNNSLLFIPDIKLAIDNKD 207 (285)
T ss_dssp ----------HHHTCTTCCCBCCTTHHHHHHHTC
T ss_pred ----------CCCCCcccCCCCChHHHHHHHcCC
Confidence 11257889999998 999987543
No 32
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.90 E-value=6.4e-24 Score=193.49 Aligned_cols=176 Identities=16% Similarity=0.117 Sum_probs=129.8
Q ss_pred HHHHHHhCCCCCcccccc-CCCCcHHHHHcc---CCCC---hhhHhhcCCC-----------CCcCCCCCCcHHHHHHHc
Q 016455 3 LARFLIRRDTSWEITDSF-QDQSKPKIHRYG---ANPN---ASSVDQKGIG-----------ESSANDNAETPLFLATKS 64 (389)
Q Consensus 3 ~v~~Ll~~ga~vn~~d~~-~~~~~~~lh~a~---~~~~---~~~Ll~~ga~-----------~n~~d~~G~tpLh~Aa~~ 64 (389)
++++|++.|++++..+.. +..+.+|||.|+ ..+. ++.|+++|++ .+..|..|+||||+|+..
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHT
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHc
Confidence 566777799999987731 235678889776 4454 4588888754 445566899999999999
Q ss_pred CcHHHHHHHHHHCCCCccccc--------------cCCChHHHHHHHhCChHHHHHHHc---cCCcccccccccccCCcc
Q 016455 65 GCIEIVKEIFNVYPQAVEHID--------------DEGRNILHVAIKYRQLEIFELVVQ---MEVPMRRLVRKIDNGGNT 127 (389)
Q Consensus 65 g~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~~~~~iv~~Ll~---~g~~~~~~~~~~d~~G~T 127 (389)
|+.+++++|+ +.|++++.+| ..|+||||+|+..|+.+++++|++ .|++ ++.+|.+|+|
T Consensus 104 g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~----~~~~d~~g~T 178 (260)
T 3jxi_A 104 RCKHYVELLV-EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD----LRRQDSRGNT 178 (260)
T ss_dssp TCHHHHHHHH-HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCCTTSCC
T ss_pred CCHHHHHHHH-hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----CcccCCCCCc
Confidence 9999999999 7899999998 689999999999999999999999 8998 9999999999
Q ss_pred cchhccccCCCccc--ccC-CChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 128 LLHMTGIKRSDYVP--EKM-EGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 128 pLh~A~~~~~~~~~--~~l-~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
|||+|+..++.... +.+ .-..+++..+. .-.......+.+|.+|+||+|+|++.+.
T Consensus 179 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga------~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 179 VLHALVAIADNTRENTKFVTKMYDLLLIKCA------KLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHHHHHHCCSSHHHHHHHHHHHHHHHHHHH------HHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHhccCchhHHHHHHHHHHHHHHhCc------ccccccchhhcccCCCCCHHHHHHHcCC
Confidence 99999987663211 000 00011111111 1000111226799999999999988653
No 33
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=2.7e-24 Score=194.06 Aligned_cols=169 Identities=14% Similarity=0.058 Sum_probs=123.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+.++.|+++|+++|... .+.++||.|+..+..+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ ++|
T Consensus 19 ~~~~~ll~~g~~~~~~~----~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g 93 (239)
T 1ycs_B 19 KTGSERIAHGMRVKFNP----LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-QFG 93 (239)
T ss_dssp ----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHT
T ss_pred HHHHHHhccCCCcccCc----hhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 67899999999998653 6678999999888765 889999999999999999999999999999999999 679
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCc-ccchhc--cccCCCcccccCCChhHHhhHHH
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGN-TLLHMT--GIKRSDYVPEKMEGPALVLQEEL 155 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~-TpLh~A--~~~~~~~~~~~l~~~~l~l~~~~ 155 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|. ||||+| +..++.+++ .+++..+.
T Consensus 94 a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~~~t~l~~a~~~~~g~~~~~------~~Ll~~~a 163 (239)
T 1ycs_B 94 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA----VFAMTYSDMQTAADKCEEMEEGYTQCS------QFLYGVQE 163 (239)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCSSSCCCHHHHCCSSSTTCCCHH------HHHHHHHH
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cceecCCCCcchHHHHHHhhhccHHHH------HHHHHhhh
Confidence 99999999999999999999999999999999999 999998887 999999 777888877 23322222
Q ss_pred HHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 156 LWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 156 ~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
. +............+..+++|.+++.+...
T Consensus 164 ~----~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 164 K----MGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp H----TTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred c----ccccccceEEEEeccCCCCCCcccccCCC
Confidence 1 11111111223457788999988766543
No 34
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=7.1e-25 Score=197.02 Aligned_cols=161 Identities=20% Similarity=0.236 Sum_probs=130.0
Q ss_pred HHHHHHHhCCC----CCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHH
Q 016455 2 ELARFLIRRDT----SWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 e~v~~Ll~~ga----~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
++++.|++.+. ++|..|. .+.+|||.|+..+..+ +|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 22 ~~v~~Ll~~~~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 98 (236)
T 1ikn_D 22 ALTMEVIRQVKGDLAFLNFQNN---LQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLT 98 (236)
T ss_dssp SSSSCCCC-----CCCCCCCCT---TCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHhhccHHHhhccCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34556666554 7888876 5667899888887765 788999999999999999999999999999999999
Q ss_pred HHCCCC------ccccccCCChHHHHHHHhCChHHHHHHHccCCccccccccccc-CCcccchhccccCCCcccccCCCh
Q 016455 75 NVYPQA------VEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVPEKMEGP 147 (389)
Q Consensus 75 ~~~~~~------~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLh~A~~~~~~~~~~~l~~~ 147 (389)
..+.+ ++..|..|+||||+|+.+|+.+++++|+++|++ ++.+|. +|+||||+|+..++.+++
T Consensus 99 -~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v------ 167 (236)
T 1ikn_D 99 -QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD----VNAQEPCNGRTALHLAVDLQNPDLV------ 167 (236)
T ss_dssp -HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTTCCCHHHHHHHTTCHHHH------
T ss_pred -hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHcCCHHHH------
Confidence 55443 678889999999999999999999999999998 999997 999999999999987776
Q ss_pred hHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 148 ALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 148 ~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
.+++.. ...++.+|.+|+||+++|.+.+.
T Consensus 168 ~~Ll~~-------------ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 168 SLLLKC-------------GADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp HHHHTT-------------TCCSCCCCTTCCCGGGGCTTSSC
T ss_pred HHHHHc-------------CCCCCcccCCCCCHHHHHHccCc
Confidence 121111 11157789999999999987543
No 35
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.90 E-value=8.9e-24 Score=193.12 Aligned_cols=162 Identities=15% Similarity=0.158 Sum_probs=84.6
Q ss_pred HHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCC
Q 016455 3 LARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQ 79 (389)
Q Consensus 3 ~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~ 79 (389)
++++|+++|++++..+ .+.+|+|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|+
T Consensus 84 ~v~~Ll~~g~~~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~ 158 (261)
T 2xai_A 84 CVNLLLQHGASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL-ESGA 158 (261)
T ss_dssp HHHHHHHTTCCSSCSC----TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH-HHTC
T ss_pred HHHHHHHCCCCCCCCC----CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH-HcCC
Confidence 4444444444443222 2334455554444433 455555665555556666666666666666666665 3455
Q ss_pred CccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHH
Q 016455 80 AVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYE 159 (389)
Q Consensus 80 ~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~ 159 (389)
+++. |..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++ +. .+.+.. .
T Consensus 159 ~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpl~~A~~~~~--~~------~~ll~~-----~ 220 (261)
T 2xai_A 159 DVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPESP--LA------QLFLER-----E 220 (261)
T ss_dssp CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTTCT--HH------HHHHHC------
T ss_pred CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCChhhhcccccc--HH------HHHHhc-----c
Confidence 5553 55566666666666666666666666655 56666666666666654322 11 000000 0
Q ss_pred HHHhhcchhhhhhccCCCCChHHHHhhh
Q 016455 160 RVEEVSIPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 160 ~v~~~~~~~~~~~~n~~g~Tpl~la~~~ 187 (389)
.-.........+.+|..|+||+|.+.+.
T Consensus 221 ~~~~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 221 GPPSLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp CCCCHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred CCccHHHHHHHHHHHHhchhccccCccc
Confidence 0000000112467899999999988764
No 36
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.90 E-value=4.1e-24 Score=204.65 Aligned_cols=163 Identities=18% Similarity=0.116 Sum_probs=97.2
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCc-----------------------------
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESS----------------------------- 49 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~----------------------------- 49 (389)
+++++|+++|+++|..|. .+.+|||.|+..+..+ +|+++|++++.
T Consensus 34 ~~v~~Ll~~g~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 110 (364)
T 3ljn_A 34 DEVRRLIETGVSPTIQNR---FGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKER 110 (364)
T ss_dssp HHHHHHHHTTCCTTCCCT---TCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccccCC---CCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhcccc
Confidence 688999999999988886 4456777777766544 78888876654
Q ss_pred -----------------------CCCCCCcHHHHHHHcC--cHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHH
Q 016455 50 -----------------------ANDNAETPLFLATKSG--CIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIF 104 (389)
Q Consensus 50 -----------------------~d~~G~tpLh~Aa~~g--~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv 104 (389)
+|..|.||||+|+..| +.+++++|+ +.|++++.+|..|+||||+|+.+|+.+++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~g~~~~v 189 (364)
T 3ljn_A 111 GQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILV-QLGASPTAKDKADETPLMRAMEFRNREAL 189 (364)
T ss_dssp TCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 3444555555555555 555555555 33455555555555555555555555555
Q ss_pred HHHHccCCc-ccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcc-hhhhhhccCCCCChHH
Q 016455 105 ELVVQMEVP-MRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSI-PHFRNHRNNMGFTPEE 182 (389)
Q Consensus 105 ~~Ll~~g~~-~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~-~~~~~~~n~~g~Tpl~ 182 (389)
++|+++|++ ....+|.+|.+|+||||+|+..++.+++ +.+.. ...++.+|.+|+||++
T Consensus 190 ~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v--------------------~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 190 DLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVA--------------------MRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp HHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHH--------------------HHHHTTTCCTTCCCTTSCCHHH
T ss_pred HHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHH--------------------HHHHHcCCCCCCCCCCCCCHHH
Confidence 555554443 1112445555555555555555544443 11111 1125788999999999
Q ss_pred HHhhhh
Q 016455 183 LFATAN 188 (389)
Q Consensus 183 la~~~~ 188 (389)
+|++.+
T Consensus 250 ~A~~~g 255 (364)
T 3ljn_A 250 LSVRAA 255 (364)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 998764
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=6.7e-24 Score=184.61 Aligned_cols=132 Identities=20% Similarity=0.139 Sum_probs=122.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..|. .+.+|+|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 49 ~~v~~Ll~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 124 (192)
T 2rfm_A 49 NAIDKLVENFDKLEDKDI---EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EHG 124 (192)
T ss_dssp GGHHHHHHHHCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHhccccccccc---cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HCC
Confidence 689999999999998886 4567889888887655 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 125 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 125 ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHhCcHHHH
Confidence 99999999999999999999999999999999998 999999999999999999987776
No 38
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=1e-23 Score=189.43 Aligned_cols=170 Identities=15% Similarity=0.092 Sum_probs=128.9
Q ss_pred ccccccCCCCcHHHHHccCCCChh---hHhh----cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccC
Q 016455 15 EITDSFQDQSKPKIHRYGANPNAS---SVDQ----KGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE 87 (389)
Q Consensus 15 n~~d~~~~~~~~~lh~a~~~~~~~---~Ll~----~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 87 (389)
+.+|. .+.++||.|+..|..+ .|++ .|++++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..
T Consensus 3 ~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~ 78 (241)
T 1k1a_A 3 TRADE---DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRH 78 (241)
T ss_dssp ----C---TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTT
T ss_pred cccCC---CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCC
Confidence 34554 5567899999988866 5554 79999999999999999999999999999999 789999999999
Q ss_pred CChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC--------------CChhHHhhH
Q 016455 88 GRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM--------------EGPALVLQE 153 (389)
Q Consensus 88 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l--------------~~~~l~l~~ 153 (389)
|+||||+|+..|+.+++++|++.+......++.+|.+|+||||+|+..++.++++.+ +...+....
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHH
Confidence 999999999999999999999998732233899999999999999999887766322 122333332
Q ss_pred HHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhh
Q 016455 154 ELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 154 ~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~ 188 (389)
.....+.++.+... ..++.+|.+|.||+|+|++.+
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 22222333322211 225677889999999887653
No 39
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=9.2e-24 Score=179.40 Aligned_cols=141 Identities=15% Similarity=0.158 Sum_probs=122.8
Q ss_pred cHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCCh
Q 016455 25 KPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQL 101 (389)
Q Consensus 25 ~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 101 (389)
.+++|.|+..|..+ .|++.|++++.+|..|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..|+.
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 46689998888766 788999999999999999999999999999999999 67999999999999999999999999
Q ss_pred HHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChH
Q 016455 102 EIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPE 181 (389)
Q Consensus 102 ~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl 181 (389)
+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .+.++. ....+.+|.+|+||+
T Consensus 83 ~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~-------------g~~~~~~~~~g~t~l 139 (167)
T 3v31_A 83 DIVKMLLDCGVD----VNEYDWNGGTPLLYAVHGNHVKCV------KMLLES-------------GADPTIETDSGYNSM 139 (167)
T ss_dssp HHHHHHHHHTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHT-------------TCCTTCCCTTSCCHH
T ss_pred HHHHHHHHCCCC----CCcCCCCCCCHHHHHHHcCCHHHH------HHHHHc-------------CCCCCCcCCCCCCHH
Confidence 999999999998 999999999999999999887766 111111 111467899999999
Q ss_pred HHHhhhhh
Q 016455 182 ELFATANN 189 (389)
Q Consensus 182 ~la~~~~~ 189 (389)
++|.+.+.
T Consensus 140 ~~A~~~~~ 147 (167)
T 3v31_A 140 DLAVALGY 147 (167)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCc
Confidence 99987643
No 40
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=5.4e-24 Score=191.22 Aligned_cols=160 Identities=18% Similarity=0.215 Sum_probs=134.3
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCC------CCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIG------ESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~------~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+++++|+++|+++|..|. .+.+|+|.|+..+..+ .|+++|++ ++..|..|.||||+|+..|+.+++++
T Consensus 59 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 135 (236)
T 1ikn_D 59 EIAEALLGAGCDPELRDF---RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVEL 135 (236)
T ss_dssp HHHHCCCSCCCCSCCCCT---TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 789999999999999986 5567788888777655 88999876 46778899999999999999999999
Q ss_pred HHHHCCCCcccccc-CCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHh
Q 016455 73 IFNVYPQAVEHIDD-EGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVL 151 (389)
Q Consensus 73 Ll~~~~~~~~~~d~-~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l 151 (389)
|+ +.|++++.+|. .|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +++
T Consensus 136 Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~------~Ll 204 (236)
T 1ikn_D 136 LV-SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQ------QLG 204 (236)
T ss_dssp HH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHH------HHH
T ss_pred HH-HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHH------HHH
Confidence 99 67899999998 999999999999999999999999999 9999999999999999999877761 111
Q ss_pred hHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhh
Q 016455 152 QEELLWYERVEEVSIPHFRNHRNNMGFTPEELFAT 186 (389)
Q Consensus 152 ~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~ 186 (389)
. .........+|.+|.||.+...+
T Consensus 205 ~-----------~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 205 Q-----------LTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp T-----------TSCGGGSSCCCCCTTTCCCCC--
T ss_pred H-----------cchhhhhcCCccchHHHHhhhcc
Confidence 1 11122246788999999986654
No 41
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=7.6e-24 Score=184.25 Aligned_cols=149 Identities=15% Similarity=0.074 Sum_probs=126.1
Q ss_pred CccccccCCCCcHHHHHccCCCCh---hhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCCh
Q 016455 14 WEITDSFQDQSKPKIHRYGANPNA---SSVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRN 90 (389)
Q Consensus 14 vn~~d~~~~~~~~~lh~a~~~~~~---~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t 90 (389)
+|.+|. .+.+|||.|+..+.. +.|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+++++.+|..|+|
T Consensus 28 ~n~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDS---YNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKT 103 (192)
T ss_dssp HTCCCT---TCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCC
T ss_pred HhCcCC---CCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCc
Confidence 345565 556778888776654 4899999999999999999999999999999999999 668999999999999
Q ss_pred HHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhh
Q 016455 91 ILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFR 170 (389)
Q Consensus 91 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~ 170 (389)
|||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++. ...+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~-------------ga~~ 160 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGAN----VNDRNLEGETPLIVASKYGRSEIV------KKLLEL-------------GADI 160 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC----SSCCCTTCCCHHHHHHHHTCHHHH------HHHHHT-------------TCCT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCCHHHH------HHHHHC-------------CCCC
Confidence 99999999999999999999998 999999999999999999987766 111111 1115
Q ss_pred hhccCCCCChHHHHhhhhh
Q 016455 171 NHRNNMGFTPEELFATANN 189 (389)
Q Consensus 171 ~~~n~~g~Tpl~la~~~~~ 189 (389)
+.+|.+|+||+++|...+.
T Consensus 161 ~~~~~~g~t~l~~A~~~~~ 179 (192)
T 2rfm_A 161 SARDLTGLTAEASARIFGR 179 (192)
T ss_dssp TCBCTTSCBHHHHHHHTTC
T ss_pred CCcCCCCCCHHHHHHHhCc
Confidence 7789999999999987653
No 42
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=1.3e-23 Score=192.91 Aligned_cols=179 Identities=15% Similarity=0.122 Sum_probs=130.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|++++..|. .+.+|+|.|+..+..+ +|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 53 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 128 (285)
T 1wdy_A 53 DIVELLLRHGADPVLRKK---NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRG 128 (285)
T ss_dssp HHHHHHHHTTCCTTCCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCcccCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHH-HhC
Confidence 678888888888888776 4456777777666544 788888888888888888888888888888888888 667
Q ss_pred CCcccc----------ccCCChHHHHHHHhCChHHHHHHHcc-CCcccccccccccCCcccchhccccCCC----ccccc
Q 016455 79 QAVEHI----------DDEGRNILHVAIKYRQLEIFELVVQM-EVPMRRLVRKIDNGGNTLLHMTGIKRSD----YVPEK 143 (389)
Q Consensus 79 ~~~~~~----------d~~G~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~~d~~G~TpLh~A~~~~~~----~~~~~ 143 (389)
.+++.. |..|.||||+|+..|+.+++++|++. |++ ++.+|..|+||||+|+..++. ++++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~ 204 (285)
T 1wdy_A 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD----VNACDNMGRNALIHALLSSDDSDVEAITHL 204 (285)
T ss_dssp CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC----TTCCCTTSCCHHHHHHHCSCTTTHHHHHHH
T ss_pred CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC----CCccCCCCCCHHHHHHHccccchHHHHHHH
Confidence 777766 67788888888888888888888876 777 888888888888888877763 23211
Q ss_pred C-------------CChhHHhhHHHHHHHHHHhhcc--hhhhhhccCCCCChHHHHhhhh
Q 016455 144 M-------------EGPALVLQEELLWYERVEEVSI--PHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 144 l-------------~~~~l~l~~~~~~~~~v~~~~~--~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+ +..++.........+.++.+.. ...++.+|.+|+||+|+|.+.+
T Consensus 205 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 1 2233443333333333333322 2235778899999999998764
No 43
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.90 E-value=7.7e-24 Score=188.73 Aligned_cols=161 Identities=20% Similarity=0.236 Sum_probs=134.5
Q ss_pred HHHHHHHhCCCCCcc-ccccCCCCcHHHHHccCCCChh---hHhhcC--CCCCc-CCCCCCcHHHHHHHcCcHHHHHHHH
Q 016455 2 ELARFLIRRDTSWEI-TDSFQDQSKPKIHRYGANPNAS---SVDQKG--IGESS-ANDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~-~d~~~~~~~~~lh~a~~~~~~~---~Ll~~g--a~~n~-~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
++++.|+++|.+++. .|. .+.+|||.|+..+..+ .|+++| .+++. .|..|.||||+|+..|+.+++++|+
T Consensus 16 ~~v~~Ll~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 92 (228)
T 2dzn_A 16 FKVQELLHSKPSLLLQKDQ---DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92 (228)
T ss_dssp HHHHHHHHHCGGGTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHhcCccccccCCC---CCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 689999999987554 554 5668899998888765 889999 55555 7889999999999999999999999
Q ss_pred HHCC--CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhh
Q 016455 75 NVYP--QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQ 152 (389)
Q Consensus 75 ~~~~--~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~ 152 (389)
+.+ .+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +.++
T Consensus 93 -~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~------~Ll~ 161 (228)
T 2dzn_A 93 -DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS----VRIKDKFNQIPLHRAASVGSLKLIE------LLCG 161 (228)
T ss_dssp -SSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHH------HHHT
T ss_pred -hCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHH------HHHh
Confidence 666 88999999999999999999999999999999998 9999999999999999999877661 1111
Q ss_pred HHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 153 EELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 153 ~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
.+ +...+.+|.+|+||+|+|.+.+
T Consensus 162 ~g------------~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 162 LG------------KSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp TT------------CCCSCCCCTTSCCHHHHHHHTT
T ss_pred cC------------cccccCcCCCCCCHHHHHHHcC
Confidence 00 0125778999999999998754
No 44
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.90 E-value=1.8e-23 Score=175.45 Aligned_cols=130 Identities=14% Similarity=0.184 Sum_probs=118.5
Q ss_pred HHHHHHHhC-CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRR-DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~-ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|+++ +.++|..|. .+.+|+|. +..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.
T Consensus 16 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 90 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALNR---FGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV-EH 90 (156)
T ss_dssp HHHHHHHHTTCCCTTCCCT---TSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHhhCcCccccCC---CCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-Hc
Confidence 678999988 458888886 55678898 7777655 889999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|++++.+|..|+||||+|+.+|+.+++++|++. ++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 91 GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCHHHHHHHcCcHHHH
Confidence 899999999999999999999999999999998 77 999999999999999999987776
No 45
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.90 E-value=7.2e-24 Score=189.44 Aligned_cols=160 Identities=23% Similarity=0.225 Sum_probs=135.3
Q ss_pred HHHHHHHhCCCC-CccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTS-WEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~-vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
|.++.|++.+.+ ++..|. .+.++||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.
T Consensus 20 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 95 (231)
T 3aji_A 20 DELKERILADKSLATRTDQ---DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALL-VK 95 (231)
T ss_dssp HHHHHHHHHCGGGGGCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHhchhhhhcCCC---CCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHH-Hc
Confidence 678888887643 555554 5667889888777655 889999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHH
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLW 157 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~ 157 (389)
+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++ .+.+..
T Consensus 96 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~---- 161 (231)
T 3aji_A 96 GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN----PDAKDHYDATAMHRAAAKGNLKMV------HILLFY---- 161 (231)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH------HHHHHT----
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHcCCHHHH------HHHHhc----
Confidence 999999999999999999999999999999999998 999999999999999999987766 111110
Q ss_pred HHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 158 YERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 158 ~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
....+.+|.+|+||+|+|.+.+
T Consensus 162 ---------g~~~~~~~~~g~t~L~~A~~~~ 183 (231)
T 3aji_A 162 ---------KASTNIQDTEGNTPLHLACDEE 183 (231)
T ss_dssp ---------TCCSCCCCTTSCCHHHHHHHTT
T ss_pred ---------CCCccccCCCCCCHHHHHHHCC
Confidence 1125778999999999998754
No 46
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.90 E-value=7.8e-24 Score=180.51 Aligned_cols=143 Identities=22% Similarity=0.275 Sum_probs=124.7
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
...+++|.|+..|..+ .|+++|+++|.+|.+|.||||+|+..|+.+++++|+ +.+.+++.+|..|+||||+|+..|
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcC
Confidence 4567899998888766 889999999999999999999999999999999999 779999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCC
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFT 179 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~T 179 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++.+ ...+.+|.+|+|
T Consensus 92 ~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~g-------------~~~~~~~~~g~t 148 (169)
T 2y1l_E 92 HLEIVEVLLKNGAD----VNANDMEGHTPLHLAAMFGHLEIV------EVLLKNG-------------ADVNAQDKFGKT 148 (169)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTSCC
T ss_pred CHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHH------HHHHHcC-------------CCCCCcCCCCCC
Confidence 99999999999998 999999999999999999987766 1111110 114678999999
Q ss_pred hHHHHhhhhh
Q 016455 180 PEELFATANN 189 (389)
Q Consensus 180 pl~la~~~~~ 189 (389)
|+++|.+.+.
T Consensus 149 ~l~~A~~~~~ 158 (169)
T 2y1l_E 149 AFDISIDNGN 158 (169)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 9999987653
No 47
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=2.2e-23 Score=197.38 Aligned_cols=181 Identities=15% Similarity=0.157 Sum_probs=132.5
Q ss_pred CHHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCC------------------------------
Q 016455 1 MELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGE------------------------------ 47 (389)
Q Consensus 1 ~e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~------------------------------ 47 (389)
+|+|++||++|+|+|.++. +.+.||||.|+..|..+ +|+++|+++
T Consensus 38 ~~~V~~LL~~Gadvn~~~~--~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (337)
T 4g8k_A 38 VDLVQQLLEGGANVNFQEE--EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKG 115 (337)
T ss_dssp HHHHHHHHHHTCCTTCCCT--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCccCC--CCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhcc
Confidence 3789999999999998875 34678899998888655 788887765
Q ss_pred ---CcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccc----------cccCCChHHHHHHHhCChHHHHHHHc-cCCc
Q 016455 48 ---SSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEH----------IDDEGRNILHVAIKYRQLEIFELVVQ-MEVP 113 (389)
Q Consensus 48 ---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~----------~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g~~ 113 (389)
+..|..|.||+|+|+..|+.++++.|+ ..|++++. .+..|+||||+|+++|+.+++++|++ .|++
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll-~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad 194 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC
T ss_pred chhhhhccCCCCHHHHHHHcCcHHHHHHHH-HcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC
Confidence 455678899999999999999999999 67777654 34568999999999999999999995 5887
Q ss_pred ccccccccccCCcccchhccccCCCc----ccccC-------------CChhHHhhHHHHHHHHHHhhcc--hhhhhhcc
Q 016455 114 MRRLVRKIDNGGNTLLHMTGIKRSDY----VPEKM-------------EGPALVLQEELLWYERVEEVSI--PHFRNHRN 174 (389)
Q Consensus 114 ~~~~~~~~d~~G~TpLh~A~~~~~~~----~~~~l-------------~~~~l~l~~~~~~~~~v~~~~~--~~~~~~~n 174 (389)
+|.+|..|+||+|.++..+... +++.+ +..++.........+.++.+.. ...++.+|
T Consensus 195 ----~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d 270 (337)
T 4g8k_A 195 ----VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 270 (337)
T ss_dssp ----TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBC
T ss_pred ----cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcC
Confidence 8888888888888877544432 21111 1223333333333334443332 22367889
Q ss_pred CCCCChHHHHhhhh
Q 016455 175 NMGFTPEELFATAN 188 (389)
Q Consensus 175 ~~g~Tpl~la~~~~ 188 (389)
.+|+||+|+|++.+
T Consensus 271 ~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 271 SDGKTALLLAVELK 284 (337)
T ss_dssp TTSCBHHHHHHHTT
T ss_pred CCCCCHHHHHHHcC
Confidence 99999999998764
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=2.1e-23 Score=179.46 Aligned_cols=132 Identities=17% Similarity=0.241 Sum_probs=119.8
Q ss_pred HHHHHHHhC-CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRR-DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~-ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++ +.++|..|. .+.+|||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.
T Consensus 19 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 94 (179)
T 3f6q_A 19 VAVRLWLDNTENDLNQGDD---HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLL-QY 94 (179)
T ss_dssp HHHHHHHHCTTSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHhcCcccccccCC---CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 678999988 678888886 5567899888887765 889999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 95 g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 95 KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL----VSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----cchhccCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 999999999999999987665544
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.89 E-value=1.9e-23 Score=175.01 Aligned_cols=139 Identities=16% Similarity=0.116 Sum_probs=120.0
Q ss_pred HHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChH
Q 016455 26 PKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLE 102 (389)
Q Consensus 26 ~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~ 102 (389)
+++|.|+..|..+ .|+++|++++ .|..|.||||+|+..|+.+++++|+ +.+.+++.+|..|+||||+|+..|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 5688888887765 8899999887 5889999999999999999999999 789999999999999999999999999
Q ss_pred HHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHH
Q 016455 103 IFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEE 182 (389)
Q Consensus 103 iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~ 182 (389)
++++|+++|++ ++.+|.+|+||||+|+..++.+++ .+.++.+ ..++.+|.+|+||++
T Consensus 82 ~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~g-------------a~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 82 IVEVLLKHGAD----VNAKDMLKMTALHWATEHNHQEVV------ELLIKYG-------------ADVHTQSKFCKTAFD 138 (153)
T ss_dssp HHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTSCCHHH
T ss_pred HHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHH------HHHHHcC-------------CCccccCCCCCCHHH
Confidence 99999999998 999999999999999999987766 1111110 115778999999999
Q ss_pred HHhhhhh
Q 016455 183 LFATANN 189 (389)
Q Consensus 183 la~~~~~ 189 (389)
+|.+.+.
T Consensus 139 ~A~~~~~ 145 (153)
T 1awc_B 139 ISIDNGN 145 (153)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9987654
No 50
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=3.7e-24 Score=197.56 Aligned_cols=162 Identities=18% Similarity=0.199 Sum_probs=134.4
Q ss_pred HHHHHHHhCCCC--CccccccCCCCcHHHHHccCCCChh---hHhhcCC-CCCcCCCCCCcHHHHHH-----HcCcHHHH
Q 016455 2 ELARFLIRRDTS--WEITDSFQDQSKPKIHRYGANPNAS---SVDQKGI-GESSANDNAETPLFLAT-----KSGCIEIV 70 (389)
Q Consensus 2 e~v~~Ll~~ga~--vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga-~~n~~d~~G~tpLh~Aa-----~~g~~~~v 70 (389)
+.++.+++.+.+ +|..|. .+.+|||+|+..+..+ .|+++|+ +++..|..|.||||+|+ ..++.+++
T Consensus 90 ~~~~~l~~~~~~~~~n~~d~---~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v 166 (276)
T 4hbd_A 90 VTFRAMSARLLDYVVNIADS---NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETV 166 (276)
T ss_dssp HHHHHHCHHHHHHHHTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCCC---CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHH
Confidence 345666666555 777776 5567899998888765 8899998 99999999999999999 67899999
Q ss_pred HHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHH
Q 016455 71 KEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALV 150 (389)
Q Consensus 71 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~ 150 (389)
+.|+ ..|.+.+..|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++++ ++
T Consensus 167 ~~Ll-~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad----~n~~d~~G~TpLh~A~~~g~~~iv~------~L 235 (276)
T 4hbd_A 167 LQLF-RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD----VNVQDDDGSTALMCACEHGHKEIAG------LL 235 (276)
T ss_dssp HHHH-HHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHH------HH
T ss_pred HHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CCCCCCCCCCHHHHHHHCCCHHHHH------HH
Confidence 9999 66788889999999999999999999999999999999 9999999999999999999877762 11
Q ss_pred hhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 151 LQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 151 l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
+. .....++.+|.+|+||+++|.+.+.
T Consensus 236 l~------------~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 236 LA------------VPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp HT------------STTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred Hh------------cCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 11 0111257889999999999987643
No 51
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=4.2e-23 Score=174.98 Aligned_cols=131 Identities=19% Similarity=0.148 Sum_probs=116.7
Q ss_pred HHHHHHHhC-CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRR-DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~-ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|++. +.+++..+. .+.+++|.|+..+..+ .|+++|++++.+|.+|+||||+|+..|+.+++++|+ +.
T Consensus 22 ~~v~~ll~~~~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 97 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIEG---RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KH 97 (165)
T ss_dssp HHHHHHCCTTTTTCCCTTT---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCCcccccc---CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH-hC
Confidence 678999984 556655554 4567899998888765 889999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+. ++.+++
T Consensus 98 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 98 GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCChhHhHhc-CChHHH
Confidence 999999999999999999999999999999999998 99999999999999877 665655
No 52
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.2e-23 Score=177.47 Aligned_cols=143 Identities=20% Similarity=0.224 Sum_probs=122.8
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
...+++|.|+..+..+ .|+++|++++.+|..|+||||+|+. |+.+++++|+ +.+.+++.+|..|+||||+|+.+|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 4457899998888766 7899999999999999999999999 9999999999 779999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCC
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFT 179 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~T 179 (389)
+.+++++|+++|++ ++.+|.+|+||||+|++.++.+++ .+.++.. ....+.+|.+|+|
T Consensus 82 ~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~g------------~~~~~~~~~~g~t 139 (162)
T 1ihb_A 82 FLDTLQTLLEFQAD----VNIEDNEGNLPLHLAAKEGHLRVV------EFLVKHT------------ASNVGHRNHKGDT 139 (162)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHHS------------CCCTTCCCTTSCC
T ss_pred CHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHH------HHHHHcc------------CCCCCCcCCCCCc
Confidence 99999999999998 999999999999999999987766 1111110 0113678999999
Q ss_pred hHHHHhhhhh
Q 016455 180 PEELFATANN 189 (389)
Q Consensus 180 pl~la~~~~~ 189 (389)
|+++|.+.+.
T Consensus 140 ~l~~A~~~~~ 149 (162)
T 1ihb_A 140 ACDLARLYGR 149 (162)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999987643
No 53
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=4.8e-23 Score=189.15 Aligned_cols=180 Identities=17% Similarity=0.127 Sum_probs=141.8
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..+. ..+.+|||.|+..+..+ +|+++|++++.+|.+|.||||+|+..|+.+++++|+ +.|
T Consensus 19 ~~v~~Ll~~g~~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 95 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQEE--EGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFL-SKG 95 (285)
T ss_dssp HHHHHHHHTTCCTTCCCT--TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCcccccC--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 789999999999987732 35668899998888765 899999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCccccccccc----------ccCCcccchhccccCCCcccccCC---
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKI----------DNGGNTLLHMTGIKRSDYVPEKME--- 145 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~----------d~~G~TpLh~A~~~~~~~~~~~l~--- 145 (389)
.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+ |.+|.||||+|+..++.++++.+.
T Consensus 96 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~ 171 (285)
T 1wdy_A 96 ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN----VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM 171 (285)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC----TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS
T ss_pred CCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC----cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999988 6666 888999999999999887764321
Q ss_pred -----------ChhHHhhHHHHH----HHHHHhhcc-hhhhhhccCCCCChHHHHhhhh
Q 016455 146 -----------GPALVLQEELLW----YERVEEVSI-PHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 -----------~~~l~l~~~~~~----~~~v~~~~~-~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
...+........ .+.++.+.. ...++.+|.+|+||+|+|.+.+
T Consensus 172 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 230 (285)
T 1wdy_A 172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230 (285)
T ss_dssp CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 112221111000 111111111 1124678899999999998754
No 54
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.89 E-value=4.7e-23 Score=195.10 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=101.2
Q ss_pred HHHHHHHh-CCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIR-RDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~-~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+.++.|++ .|.++|..|. .+.+|||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.
T Consensus 38 ~~v~~ll~~~~~~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~ 113 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDG---RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL-KH 113 (351)
T ss_dssp HHHHHHCCTTTTTCCCSST---TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHhcCCCcccCCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH-HC
Confidence 45666665 4899988886 5567899998888765 899999999999999999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCC
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGG 125 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G 125 (389)
|++++..|..|+||||+|+.+|+.+++++|+++|++ ++..|..|
T Consensus 114 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g 157 (351)
T 3utm_A 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD----PTLVNCHG 157 (351)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTS
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CccccCCC
Confidence 999999999999999999999999999999999987 55544333
No 55
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.88 E-value=5.4e-23 Score=201.57 Aligned_cols=179 Identities=18% Similarity=0.199 Sum_probs=130.6
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..+. .+.+|+|.|+..+..+ +|+++|++++..+.+|.||||+|+..|+.++++.|+ +.+
T Consensus 160 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 235 (437)
T 1n11_A 160 RVAELLLERDAHPNAAGK---NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL-QYG 235 (437)
T ss_dssp HHHHHHHHTTCCTTCCCS---SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHhCCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 678888888888888775 4556788887776654 788888888888888889999988888888888888 778
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccC-------------C
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM-------------E 145 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l-------------~ 145 (389)
.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++.++.++++.+ +
T Consensus 236 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 311 (437)
T 1n11_A 236 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 311 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCC
Confidence 88888888888999998888888888888888887 888888888999988888877665322 1
Q ss_pred ChhHHhhHHHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhh
Q 016455 146 GPALVLQEELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 ~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~ 188 (389)
..++.........+.++.+... ..++.+|..|+||+|+|++.+
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC
Confidence 2233333222222222222111 124566777777777776543
No 56
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.6e-23 Score=172.01 Aligned_cols=122 Identities=10% Similarity=0.111 Sum_probs=112.0
Q ss_pred CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccC
Q 016455 11 DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE 87 (389)
Q Consensus 11 ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 87 (389)
++++|..|. .+.++||.|+..+..+ .|+++|++++.+|..|+||||+|+. |+.+++++|+ +.+++++.+|..
T Consensus 2 ~~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLGG---SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPA 76 (136)
T ss_dssp CCCCSCCCC---CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTT
T ss_pred CCCccCCCC---CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCC
Confidence 567888886 5567899888888765 8899999999999999999999999 9999999999 678999999999
Q ss_pred -CChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 88 -GRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 88 -G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~ 127 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGAR----LDVCDAWGRLPVDLAEEQGHRDIA 127 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCC----CCCCSSSSSCHHHHHHHHTCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999998 999999999999999999887766
No 57
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.88 E-value=2e-23 Score=176.99 Aligned_cols=144 Identities=21% Similarity=0.226 Sum_probs=122.3
Q ss_pred CCcHHHHHccCCCChh---hHhh-cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHh
Q 016455 23 QSKPKIHRYGANPNAS---SVDQ-KGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~-~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
.+.+++|.|+..+..+ .|++ .+.+++..|..|.||||+|+..|+.+++++|+ +.+.+++.+|.+|+||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHHc
Confidence 4567899998888776 5555 56778888999999999999999999999999 78999999999999999999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCC
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGF 178 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++. ....+.+|.+|+
T Consensus 86 ~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~-------------ga~~~~~~~~g~ 142 (165)
T 3twr_A 86 GHYEVAELLVKHGAV----VNVADLWKFTPLHEAAAKGKYEIC------KLLLQH-------------GADPTKKNRDGN 142 (165)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHH------HHHHHT-------------TCCTTCCCTTSC
T ss_pred CcHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHHcCCHHHH------HHHHHc-------------CCCCcccCCCCC
Confidence 999999999999998 999999999999999999987776 111111 111578899999
Q ss_pred ChHHHHhhhhhh
Q 016455 179 TPEELFATANNE 190 (389)
Q Consensus 179 Tpl~la~~~~~~ 190 (389)
||+|+|.+.+.+
T Consensus 143 t~l~~a~~~~~~ 154 (165)
T 3twr_A 143 TPLDLVKDGDTD 154 (165)
T ss_dssp CTGGGSCTTCHH
T ss_pred ChhHhHhcCChH
Confidence 999998775443
No 58
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.88 E-value=1.5e-23 Score=201.88 Aligned_cols=178 Identities=14% Similarity=0.094 Sum_probs=131.0
Q ss_pred HHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC-
Q 016455 3 LARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP- 78 (389)
Q Consensus 3 ~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~- 78 (389)
.++.|+++|+++|..|. .+.+|||.|+..+..+ +|+++|++++.+|..|.||||+|+..|+.+++++|+ ..+
T Consensus 148 ~~~~ll~~ga~vn~~d~---~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~ 223 (373)
T 2fo1_E 148 EAKECIAAGADVNAMDC---DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML-NSTK 223 (373)
T ss_dssp HHHHHHHTCCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHT-TSHH
T ss_pred HHHHHHhcCCCCcCCCC---CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH-hcCc
Confidence 45778889999888886 4457778777766554 888889999988889999999999999999999888 555
Q ss_pred --CCccccccCCChHHHHHHHhC---ChHHHHHHHccCCcccccccc--------cccCCcccchhccccCCCcccccC-
Q 016455 79 --QAVEHIDDEGRNILHVAIKYR---QLEIFELVVQMEVPMRRLVRK--------IDNGGNTLLHMTGIKRSDYVPEKM- 144 (389)
Q Consensus 79 --~~~~~~d~~G~t~Lh~A~~~~---~~~iv~~Ll~~g~~~~~~~~~--------~d~~G~TpLh~A~~~~~~~~~~~l- 144 (389)
.+++..|..|+||||+|+..+ +.+++++|+++|++ ++. +|.+|+||||+|+..++.++++.+
T Consensus 224 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 224 LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK----VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC----SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC----cccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 678888888999999988887 78888888888877 443 677888899988888877766332
Q ss_pred -------------CChhHHhhHHHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhh
Q 016455 145 -------------EGPALVLQEELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 145 -------------~~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+..++.........+.++.+... ..++.+|.+|+||+++|.+.+
T Consensus 300 ~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence 12334433333333333332221 124678899999999988754
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.88 E-value=1.8e-22 Score=180.72 Aligned_cols=179 Identities=18% Similarity=0.166 Sum_probs=140.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCC-CCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSAND-NAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
|++++|+++|++++..+. .+.+++|.|+..+..+ .|+++|++++..+. .|.||||+|+..|+.++++.|+ +.
T Consensus 23 ~~~~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~ 98 (240)
T 3eu9_A 23 ERCRELVEAGYDVRQPDK---ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM-KY 98 (240)
T ss_dssp HHHHHHHHTTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCcCCCCC---CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-Hc
Confidence 789999999999998886 4567888888877655 88999999976654 5999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCC-CcccccC------------
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRS-DYVPEKM------------ 144 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~-~~~~~~l------------ 144 (389)
+++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++ .++.+.+
T Consensus 99 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~ 174 (240)
T 3eu9_A 99 GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD----VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK 174 (240)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCT
T ss_pred CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC----ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhc
Confidence 999999999999999999999999999999999998 99999999999999997665 3443211
Q ss_pred --CChhHHhhHHHHHHHHHHhhcch-hhhhhccCCCCChHHHHhhhh
Q 016455 145 --EGPALVLQEELLWYERVEEVSIP-HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 145 --~~~~l~l~~~~~~~~~v~~~~~~-~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+..++.........+.++.+... ..++.+|.+|+||+++|.+.+
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 175 YHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 12334333333223333322221 124677888888888887764
No 60
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=3.4e-23 Score=170.15 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=107.9
Q ss_pred CCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccC
Q 016455 11 DTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE 87 (389)
Q Consensus 11 ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 87 (389)
|+|+ .+|. .+.++||.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+++++.+|..
T Consensus 1 G~d~-~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FTNH---RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALVNTTGYQ 75 (137)
T ss_dssp ---C-CCCT---TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCGG
T ss_pred CCCC-CcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCcccCcCCC
Confidence 6676 4554 5667899888877655 889999999999999999999999999999999999 789999999999
Q ss_pred CChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 88 GRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 88 G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..+..+++
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHH
Confidence 99999999999999999999999998 999999999999999987766555
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.88 E-value=3e-23 Score=177.07 Aligned_cols=140 Identities=20% Similarity=0.205 Sum_probs=121.0
Q ss_pred HHHHHccCCCChh---hHhhcCCC-CCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCCh
Q 016455 26 PKIHRYGANPNAS---SVDQKGIG-ESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQL 101 (389)
Q Consensus 26 ~~lh~a~~~~~~~---~Ll~~ga~-~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~ 101 (389)
+++|.|+..|..+ .|++.|.+ ++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCCH
Confidence 5688888888766 77888877 7899999999999999999999999999 67899999999999999999999999
Q ss_pred HHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChH
Q 016455 102 EIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPE 181 (389)
Q Consensus 102 ~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl 181 (389)
+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++. ...++.+|.+|+||+
T Consensus 83 ~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v------~~Ll~~-------------ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 83 DIVGLLLERDVD----INIYDWNGGTPLLYAVRGNHVKCV------EALLAR-------------GADLTTEADSGYTPM 139 (172)
T ss_dssp HHHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHT-------------TCCTTCCCTTSCCHH
T ss_pred HHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHH------HHHHHc-------------CCCccccCCCCCCHH
Confidence 999999999998 999999999999999999987776 111111 011577899999999
Q ss_pred HHHhhhhh
Q 016455 182 ELFATANN 189 (389)
Q Consensus 182 ~la~~~~~ 189 (389)
++|.+.+.
T Consensus 140 ~~A~~~~~ 147 (172)
T 3v30_A 140 DLAVALGY 147 (172)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCc
Confidence 99987653
No 62
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=6.6e-23 Score=179.15 Aligned_cols=133 Identities=21% Similarity=0.234 Sum_probs=121.4
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHh-hcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVD-QKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll-~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|..|. .+.+|+|.|+..+..+ .|+ +.+++++..|..|.||||+|+..|+.+++++|++..
T Consensus 53 ~~v~~Ll~~g~~~~~~~~---~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 53 EIAKALIDRGADINLQNS---ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp HHHHHHHHTTCCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 789999999999999886 5557889888888765 666 678899999999999999999999999999999666
Q ss_pred CCCccccccCCChHHHHHHHhCC-----hHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQ-----LEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~-----~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+.+++.+|..|+||||+|+..++ .+++++|+++|++ ++.+|.+|+||||+|++.++.+++
T Consensus 130 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~ 194 (201)
T 3hra_A 130 REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD----QSIKDNSGRTAMDYANQKGYTEIS 194 (201)
T ss_dssp CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHcCCHhHH
Confidence 69999999999999999999998 9999999999999 999999999999999999988776
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=3.3e-23 Score=188.44 Aligned_cols=137 Identities=17% Similarity=0.150 Sum_probs=120.9
Q ss_pred CHHHHHHHhCCCCCcccc--------ccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCC-------------CCc
Q 016455 1 MELARFLIRRDTSWEITD--------SFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDN-------------AET 56 (389)
Q Consensus 1 ~e~v~~Ll~~ga~vn~~d--------~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~-------------G~t 56 (389)
.|++++|+++|++++..+ .....+.+|||.|+..+..+ +|+++|++++.+|.. |.|
T Consensus 59 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~t 138 (256)
T 2etb_A 59 NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGEL 138 (256)
T ss_dssp CTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSS
T ss_pred HHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCC
Confidence 378999999998877433 11135678899999888765 899999999999886 999
Q ss_pred HHHHHHHcCcHHHHHHHHHH--CCCCccccccCCChHHHHHHH--hCChH-------HHHHHHccCCcccccc-------
Q 016455 57 PLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIK--YRQLE-------IFELVVQMEVPMRRLV------- 118 (389)
Q Consensus 57 pLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~--~~~~~-------iv~~Ll~~g~~~~~~~------- 118 (389)
|||+|+..|+.+++++|++. .|++++.+|.+|+||||+|+. .++.+ ++++|+++|++ +
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~----~~~~~~~~ 214 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR----LCPTVQLE 214 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HSTTCCGG
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC----cccccccc
Confidence 99999999999999999943 899999999999999999999 78888 99999999988 7
Q ss_pred cccccCCcccchhccccCCCccc
Q 016455 119 RKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 119 ~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+.+|.+|+||||+|++.|+.+++
T Consensus 215 ~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 215 EISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cccCCCCCCHHHHHHHhCCHHHH
Confidence 89999999999999999998887
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.88 E-value=4.1e-23 Score=177.63 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=119.7
Q ss_pred CcHHHHHccCCCChh---hHhhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 24 SKPKIHRYGANPNAS---SVDQK-GIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 24 ~~~~lh~a~~~~~~~---~Ll~~-ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
..+++|.|+..+..+ .|+++ +.+++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcC
Confidence 345688888888766 66666 7889999999999999999999999999999 779999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCC
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFT 179 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~T 179 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++. ...++.+|.+|+|
T Consensus 84 ~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v------~~Ll~~-------------ga~~~~~~~~g~t 140 (179)
T 3f6q_A 84 HRDIVQKLLQYKAD----INAVNEHGNVPLHYACFWGQDQVA------EDLVAN-------------GALVSICNKYGEM 140 (179)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHT-------------TCCSSBCCTTSCC
T ss_pred CHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHH------HHHHHC-------------CCCcchhccCCCC
Confidence 99999999999998 999999999999999999987766 111111 1115788999999
Q ss_pred hHHHHhhhh
Q 016455 180 PEELFATAN 188 (389)
Q Consensus 180 pl~la~~~~ 188 (389)
|+++|.+..
T Consensus 141 pl~~A~~~~ 149 (179)
T 3f6q_A 141 PVDKAKAPL 149 (179)
T ss_dssp GGGGSCHHH
T ss_pred cHHHHHHHH
Confidence 999997654
No 65
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.88 E-value=1.4e-22 Score=186.10 Aligned_cols=177 Identities=17% Similarity=0.137 Sum_probs=126.0
Q ss_pred HHHHHHH----hCCCCCcccc-ccCCCCcHHHHHccCC---CC---hhhHhhcCCCC-------C----cCCCCCCcHHH
Q 016455 2 ELARFLI----RRDTSWEITD-SFQDQSKPKIHRYGAN---PN---ASSVDQKGIGE-------S----SANDNAETPLF 59 (389)
Q Consensus 2 e~v~~Ll----~~ga~vn~~d-~~~~~~~~~lh~a~~~---~~---~~~Ll~~ga~~-------n----~~d~~G~tpLh 59 (389)
++++.|+ +.|++++..+ .....+.+|||.|+.. +. +++|+++|+++ | ..|..|.||||
T Consensus 27 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~ 106 (273)
T 2pnn_A 27 QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALH 106 (273)
T ss_dssp STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHH
T ss_pred HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHH
Confidence 3444455 4777766321 1123667889988743 54 45889988753 2 25678999999
Q ss_pred HHHHcCcHHHHHHHHHHCCCCcccccc--------------CCChHHHHHHHhCChHHHHHHHc---cCCcccccccccc
Q 016455 60 LATKSGCIEIVKEIFNVYPQAVEHIDD--------------EGRNILHVAIKYRQLEIFELVVQ---MEVPMRRLVRKID 122 (389)
Q Consensus 60 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~G~t~Lh~A~~~~~~~iv~~Ll~---~g~~~~~~~~~~d 122 (389)
+|+..|+.+++++|+ +.|++++.+|. .|+||||+|+..|+.+++++|++ .|++ ++.+|
T Consensus 107 ~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad----~~~~d 181 (273)
T 2pnn_A 107 IAIERRNMTLVTLLV-ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD----ISARD 181 (273)
T ss_dssp HHHHTTCHHHHHHHH-HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCC
T ss_pred HHHHcCCHHHHHHHH-HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC----ceeeC
Confidence 999999999999999 77999999987 79999999999999999999999 8998 99999
Q ss_pred cCCcccchhccccCCCcccc--cC-CChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 123 NGGNTLLHMTGIKRSDYVPE--KM-EGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 123 ~~G~TpLh~A~~~~~~~~~~--~l-~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
.+|+||||+|+..++..... .+ .-..+++..+.. +. ......+.+|.+|+||+|+|++.+.
T Consensus 182 ~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~----~n--~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 182 SVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK----LH--PTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HC--TTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred CCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh----cc--cccccccccCCCCCCHHHHHHHhCh
Confidence 99999999999987632210 00 000111111110 00 0001124689999999999987653
No 66
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.88 E-value=6.8e-23 Score=197.20 Aligned_cols=179 Identities=15% Similarity=0.129 Sum_probs=136.0
Q ss_pred HHHHHHhCCCCCcc-ccccCCCCcHHHHHccCCCChh--------hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHH
Q 016455 3 LARFLIRRDTSWEI-TDSFQDQSKPKIHRYGANPNAS--------SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEI 73 (389)
Q Consensus 3 ~v~~Ll~~ga~vn~-~d~~~~~~~~~lh~a~~~~~~~--------~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~L 73 (389)
++++|++.+.+... .+. .++++.+...+..+.++ .|+++|+++|.+|.+|.||||+|+..|+.+++++|
T Consensus 108 ~~~~L~~~~~n~~d~~~g--~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~L 185 (373)
T 2fo1_E 108 ITEPITRESVNIIDPRHN--RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL 185 (373)
T ss_dssp CCSCCSTTTTTTCCCSSC--CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHhccccccccCCcCC--CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHH
Confidence 44556666665544 332 47888777777776655 45799999999999999999999999999999999
Q ss_pred HHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccC---CcccccccccccCCcccchhccccC---CCcccccC---
Q 016455 74 FNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQME---VPMRRLVRKIDNGGNTLLHMTGIKR---SDYVPEKM--- 144 (389)
Q Consensus 74 l~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g---~~~~~~~~~~d~~G~TpLh~A~~~~---~~~~~~~l--- 144 (389)
+ +.|++++.+|..|+||||+|+..|+.+++++|++.+ ++ ++.+|.+|+||||+|+..+ +.++++.+
T Consensus 186 l-~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~ 260 (373)
T 2fo1_E 186 M-KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD----IEELDRNGMTALMIVAHNEGRDQVASAKLLVEK 260 (373)
T ss_dssp H-HTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT----TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH
T ss_pred H-HCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC----hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHC
Confidence 9 789999999999999999999999999999999987 56 8999999999999999877 44433221
Q ss_pred ------------------CChhHHhhHHHHHHHHHHhhcch--hhhhhccCCCCChHHHHhhhh
Q 016455 145 ------------------EGPALVLQEELLWYERVEEVSIP--HFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 145 ------------------~~~~l~l~~~~~~~~~v~~~~~~--~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+..++.........+.++.+... ..++.+|.+|+||+|+|++.+
T Consensus 261 g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 261 GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcC
Confidence 12334433322223333333321 235788999999999998754
No 67
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.87 E-value=3.7e-22 Score=185.37 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=114.7
Q ss_pred HHHHHHHhCCCCCcccccc------CCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEITDSF------QDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~------~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
|.++.++..+.+++..... ...+.+++|.|+..|..+ .|+++|+++|..|.+|.||||+|+..|+.+++++
T Consensus 12 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 91 (299)
T 1s70_B 12 EQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF 91 (299)
T ss_dssp HHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3455566665554432211 123457899998888766 8899999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+ +.|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..++.+++
T Consensus 92 Ll-~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 155 (299)
T 1s70_B 92 LV-ENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH----VGAVNSEGDTPLDIAEEEAMEELL 155 (299)
T ss_dssp HH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCSHHHHHHH
T ss_pred HH-HCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHhcchHHHH
Confidence 99 78999999999999999999999999999999999998 999999999999999988776655
No 68
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=186.26 Aligned_cols=132 Identities=18% Similarity=0.216 Sum_probs=120.2
Q ss_pred HHHHHHHhCCC-CCccccccCCCCcHHHHHccC-----CCC---hhhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDT-SWEITDSFQDQSKPKIHRYGA-----NPN---ASSVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga-~vn~~d~~~~~~~~~lh~a~~-----~~~---~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+++++|+++|+ ++|..|. .+.+|+|.|+. .+. ++.|++.|++++..|..|+||||+|+..|+.+++++
T Consensus 125 ~~v~~Ll~~g~~~~~~~~~---~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 201 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQNR---AGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKA 201 (276)
T ss_dssp HHHHHHHHTSCCCTTCCCT---TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCCC---CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 78999999998 9998886 55677888873 333 338899999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHc-cCCcccccccccccCCcccchhccccCCCccc
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQ-MEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+ +.|++++.+|.+|+||||+|+..|+.+++++|++ .|++ ++.+|.+|+||||+|++.|+.+++
T Consensus 202 Ll-~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad----~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 202 LL-ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD----ISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp HH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC----CcCcCCCCCCHHHHHHHcCCHHHH
Confidence 99 7899999999999999999999999999999999 8998 999999999999999999998877
No 69
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=2.3e-23 Score=186.93 Aligned_cols=137 Identities=13% Similarity=0.088 Sum_probs=121.1
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..|. .+.+|||.|+..+..+ +|+++|+++|.+|..|+||||+|+..|+.+++++|+ +.|
T Consensus 35 ~~v~~Ll~~g~~~~~~d~---~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~g 110 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQPNE---EGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV-QHG 110 (229)
T ss_dssp HHHHHHHHHSSCTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTT
T ss_pred HHHHHHHhcCCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 789999999999999886 5567899998887765 899999999999999999999999999999999999 789
Q ss_pred CCccccc-cCCChHHHHH--HHhCChHHHHHHHccCCccc----------------------------ccccccccCCcc
Q 016455 79 QAVEHID-DEGRNILHVA--IKYRQLEIFELVVQMEVPMR----------------------------RLVRKIDNGGNT 127 (389)
Q Consensus 79 ~~~~~~d-~~G~t~Lh~A--~~~~~~~iv~~Ll~~g~~~~----------------------------~~~~~~d~~G~T 127 (389)
++++.+| .+|+||||+| +..|+.+++++|++.|++.+ ..++.+|.+|+|
T Consensus 111 a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~T 190 (229)
T 2vge_A 111 AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEET 190 (229)
T ss_dssp CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCS
T ss_pred CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCccc
Confidence 9999987 6999999999 99999999999999875521 125677889999
Q ss_pred cchhccccCCCcccc
Q 016455 128 LLHMTGIKRSDYVPE 142 (389)
Q Consensus 128 pLh~A~~~~~~~~~~ 142 (389)
|||+|++.|+.++++
T Consensus 191 pL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 191 DWWWAALHGQEGYVP 205 (229)
T ss_dssp SEEEEEETTEEEEEE
T ss_pred HHHHHHHcCCcceee
Confidence 999999999988883
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=8.4e-23 Score=171.35 Aligned_cols=139 Identities=18% Similarity=0.195 Sum_probs=119.9
Q ss_pred cHHHHHccCCCChh---hHhhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCC
Q 016455 25 KPKIHRYGANPNAS---SVDQK-GIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 25 ~~~lh~a~~~~~~~---~Ll~~-ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~ 100 (389)
.+++|.|+..|..+ .|+++ +.+++..|..|.||||+ +..|+.++++.|+ +.|++++.+|..|+||||+|+.+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 36789998888766 66666 55899999999999999 9999999999999 7799999999999999999999999
Q ss_pred hHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCCh
Q 016455 101 LEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTP 180 (389)
Q Consensus 101 ~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tp 180 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.++++ +.++. ...+.+|.+|+||
T Consensus 81 ~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~------~Ll~~--------------~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 81 LDTLKVLVEHGAD----VNVPDGTGALPIHLAVQEGHTAVVS------FLAAE--------------SDLHRRDARGLTP 136 (156)
T ss_dssp HHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHHTCHHHHH------HHHTT--------------SCTTCCCTTSCCH
T ss_pred HHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHhChHHHHH------HHHhc--------------cCCCCcCCCCCCH
Confidence 9999999999998 9999999999999999999877661 11110 1257789999999
Q ss_pred HHHHhhhhh
Q 016455 181 EELFATANN 189 (389)
Q Consensus 181 l~la~~~~~ 189 (389)
+++|.+.+.
T Consensus 137 l~~A~~~~~ 145 (156)
T 1bd8_A 137 LELALQRGA 145 (156)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHcCc
Confidence 999987643
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.87 E-value=7.9e-23 Score=189.47 Aligned_cols=154 Identities=16% Similarity=0.116 Sum_probs=127.8
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
++.++|.+. ++|.+|. .+.+|||.|+..+..+ .|+++|++++..| |+||||+|+..|+.+++++|+ +.|
T Consensus 14 ~v~~lL~~~--~~~~~d~---~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll-~~g 85 (285)
T 3kea_A 14 QLKSFLSSK--DTFKADV---HGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILL-FSG 85 (285)
T ss_dssp HHHHHHHST--TTTCCCT---TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHH-HTT
T ss_pred HHHHHHHhC--CCCccCC---CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHH-HCC
Confidence 456666655 5778886 5567899998888765 8899999999884 999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCC-cccchhccccCCCcccccCCChhHHhhHHHHH
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGG-NTLLHMTGIKRSDYVPEKMEGPALVLQEELLW 157 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G-~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~ 157 (389)
++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+| .||||+|+..++.++++ +.+..
T Consensus 86 a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~~~~g~~t~L~~A~~~~~~~~v~------~Ll~~---- 151 (285)
T 3kea_A 86 LDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR----LMFYGKTGWKTSFYHAVMLNDVSIVS------YFLSE---- 151 (285)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG----GGGCSSSGGGSHHHHHHHTTCHHHHH------HHHTT----
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----CCccCCCCCCCHHHHHHHcCCHHHHH------HHHhC----
Confidence 99999999999999999999999999999999998 99999999 89999999999877661 11110
Q ss_pred HHHHHhhcchhhhhhccC-CCCChHHHHhhhh
Q 016455 158 YERVEEVSIPHFRNHRNN-MGFTPEELFATAN 188 (389)
Q Consensus 158 ~~~v~~~~~~~~~~~~n~-~g~Tpl~la~~~~ 188 (389)
. .+..+. +|.||+|+|+..+
T Consensus 152 -------g----~~~~~~~~g~t~L~~A~~~g 172 (285)
T 3kea_A 152 -------I----PSTFDLAILLSCIHITIKNG 172 (285)
T ss_dssp -------S----CTTCCCSTHHHHHHHHHHTT
T ss_pred -------C----CccccccCCccHHHHHHHcC
Confidence 0 122333 8999999998754
No 72
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=2.8e-22 Score=179.32 Aligned_cols=136 Identities=20% Similarity=0.209 Sum_probs=118.7
Q ss_pred HHHHHHHhCCCCC-----ccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCC-------------CCCcHHHH
Q 016455 2 ELARFLIRRDTSW-----EITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSAND-------------NAETPLFL 60 (389)
Q Consensus 2 e~v~~Ll~~ga~v-----n~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~-------------~G~tpLh~ 60 (389)
|++++|+++|+++ +..| ..+.+|||.|+..+..+ +|+++|++++.++. .|.||||+
T Consensus 51 ~~v~~Ll~~~~~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~ 127 (232)
T 2rfa_A 51 EAAMVLMEAAPELVFEPMTSEL---YEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSF 127 (232)
T ss_dssp HHHHHHHHHCGGGGGCCCCSTT---TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHH
T ss_pred HHHHHHHHcCchhccccccccC---CCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHH
Confidence 7899999999987 3344 35678899998888765 89999999988765 79999999
Q ss_pred HHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHH----HHHHccCCccc--ccccccccCCcccchhccc
Q 016455 61 ATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIF----ELVVQMEVPMR--RLVRKIDNGGNTLLHMTGI 134 (389)
Q Consensus 61 Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv----~~Ll~~g~~~~--~~~~~~d~~G~TpLh~A~~ 134 (389)
|+..|+.+++++|+ +.|++++.+|.+|+||||+|+..|+.+++ ++|++.|++.. .+.+.+|.+|+||||+|++
T Consensus 128 A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~ 206 (232)
T 2rfa_A 128 AACVGSEEIVRLLI-EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV 206 (232)
T ss_dssp HHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHH
Confidence 99999999999999 78999999999999999999999999988 99999998721 1126899999999999999
Q ss_pred cCCCccc
Q 016455 135 KRSDYVP 141 (389)
Q Consensus 135 ~~~~~~~ 141 (389)
.|+.+++
T Consensus 207 ~g~~~~v 213 (232)
T 2rfa_A 207 EGNIVMF 213 (232)
T ss_dssp HTCHHHH
T ss_pred cCCHHHH
Confidence 9998887
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=1.8e-22 Score=183.93 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=118.1
Q ss_pred CHHHHHHHhCCCCCcc---------ccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCC--------------CCC
Q 016455 1 MELARFLIRRDTSWEI---------TDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSAN--------------DNA 54 (389)
Q Consensus 1 ~e~v~~Ll~~ga~vn~---------~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d--------------~~G 54 (389)
.|++++|++.|++++. .+. +..+.+|||.|+..+..+ +|+++|++++.+| ..|
T Consensus 62 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 62 NDTIPILLDIAEKTGNMREFINSPFRDV-YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp CTHHHHHHHHHHHTTCHHHHHTCCBCCS-SEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred HHHHHHHHHhcccccchHhhhccccccc-ccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 3789999999865322 111 125678899999888765 8999999999998 689
Q ss_pred CcHHHHHHHcCcHHHHHHHHHH--CCCCccccccCCChHHHHHHHhCC---------hHHHHHHHccCCcccccc-----
Q 016455 55 ETPLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFELVVQMEVPMRRLV----- 118 (389)
Q Consensus 55 ~tpLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~~~----- 118 (389)
.||||+|+..|+.+++++|++. .|++++.+|.+|+||||+|++.++ .+++++|+++|++ +
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~ 216 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK----LFPDTN 216 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH----HCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc----cccccc
Confidence 9999999999999999999932 899999999999999999999888 7999999999988 6
Q ss_pred --cccccCCcccchhccccCCCccc
Q 016455 119 --RKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 119 --~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+.+|.+|+||||+|++.|+.+++
T Consensus 217 ~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 217 LEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred hhhcccCCCCCHHHHHHHcCCHHHH
Confidence 78999999999999999998887
No 74
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=3.4e-23 Score=174.18 Aligned_cols=135 Identities=11% Similarity=0.084 Sum_probs=101.3
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCCh-HHHHHHHh
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRN-ILHVAIKY 98 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~~ 98 (389)
.+.++||.|+..+..+ .|+++|+++|.+|..|+||||+|+ .|+.+++++|+ +.|++++.+|..|+| |||+|+..
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHHC
Confidence 5567788888877665 788899999999999999999985 89999999999 778999999999998 99999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCC
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGF 178 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+ ++.+ ...+.+|..|.
T Consensus 89 ~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~v~~L------l~~g-------------a~~~~~~~~g~ 145 (156)
T 1bi7_B 89 GFLDTLVVLHRAGAR----LDVRDAWGRLPVDLAEELGHRDVARYL------RAAA-------------GGTRGSNHARI 145 (156)
T ss_dssp TCHHHHHHHHHHTCC----SSCCCTTCCCHHHHHHHHTCHHHHHHH------SSCC------------------------
T ss_pred CCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHhCHHHHHHHH------HHcC-------------CCCCccCcCcC
Confidence 999999999999988 899999999999999998887766221 1111 11466778888
Q ss_pred ChHH
Q 016455 179 TPEE 182 (389)
Q Consensus 179 Tpl~ 182 (389)
||.+
T Consensus 146 t~~~ 149 (156)
T 1bi7_B 146 DAAE 149 (156)
T ss_dssp ----
T ss_pred cccc
Confidence 8876
No 75
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.86 E-value=1.7e-22 Score=165.88 Aligned_cols=115 Identities=23% Similarity=0.278 Sum_probs=107.7
Q ss_pred CCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHh
Q 016455 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.+++|.|+..+..+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHc
Confidence 35678899999888766 789999999999999999999999999999999999 77999999999999999999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 ~~~~~v~~Ll~~g~~----~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 91 GHLEIAEVLLKHGAD----VNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHcCCC----CcCcCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999998 999999999999999999987766
No 76
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=3.3e-22 Score=161.15 Aligned_cols=109 Identities=15% Similarity=0.126 Sum_probs=101.2
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
.+.+++|.|+..+..+ .|+++|++++.+|..|+||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..|
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcC
Confidence 5568899999888766 789999999999999999999999999999999999 789999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccC
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~ 136 (389)
+.+++++|+++|++ ++.+|.+|+||||+|...+
T Consensus 85 ~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 85 HVSCVKLLLSKGAD----KTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCCHH
T ss_pred CHHHHHHHHHcCCC----CCCcCCCCCCHHHHhCCHH
Confidence 99999999999998 9999999999999996543
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.86 E-value=2.2e-22 Score=165.29 Aligned_cols=120 Identities=24% Similarity=0.260 Sum_probs=102.6
Q ss_pred CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCccccccccccc
Q 016455 44 GIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDN 123 (389)
Q Consensus 44 ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~ 123 (389)
|+|+ .+|.+|+||||+|+..|+.+++++|+ +.+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~ 74 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----VNTTGY 74 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCG
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc----ccCcCC
Confidence 6788 78999999999999999999999999 78999999999999999999999999999999999998 999999
Q ss_pred CCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 124 GGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 124 ~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+|+||||+|+..++.+++ .+++.. ....+.+|.+|+||+|+|.+..
T Consensus 75 ~g~t~L~~A~~~~~~~~v------~~Ll~~-------------ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 75 QNDSPLHDAAKNGHVDIV------KLLLSY-------------GASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp GGCCHHHHHHHTTCHHHH------HHHHHT-------------TCCTTCCCTTSCCGGGGCCCHH
T ss_pred CCCCHHHHHHHcCCHHHH------HHHHHc-------------CCCCCCCCCCCCCHHHHHhhcc
Confidence 999999999999987766 111111 1115788999999999998654
No 78
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=8e-22 Score=165.78 Aligned_cols=122 Identities=14% Similarity=0.093 Sum_probs=96.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCc-HHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAET-PLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~t-pLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|..|. .+.+|||.|+ .+..+ +|+++|++++.+|..|.| |||+|+..|+.+++++|+ ++
T Consensus 26 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll-~~ 100 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNS---YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RA 100 (156)
T ss_dssp HHHHHHHTTTCCTTCCCS---SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH-HH
T ss_pred HHHHHHHHcCCCCCCCCC---CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHH-Hc
Confidence 789999999999999987 4556778775 55544 899999999999999999 999999999999999999 66
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMT 132 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A 132 (389)
|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||.+-+
T Consensus 101 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 101 GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG----TRGSNHARIDAAEGP 151 (156)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC----CCccCcCcCcccccC
Confidence 999999999999999999999999999999999999 999999999998744
No 79
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=3.5e-22 Score=188.82 Aligned_cols=128 Identities=12% Similarity=0.131 Sum_probs=111.3
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCC------ChhhHhhcC-CCCCcCCCCCCcHHHHHHH----cCcHHHH
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANP------NASSVDQKG-IGESSANDNAETPLFLATK----SGCIEIV 70 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~------~~~~Ll~~g-a~~n~~d~~G~tpLh~Aa~----~g~~~~v 70 (389)
|++++|+++|+++|.+|. .+.+|||.|+..+ .++.|++.+ ++++.+|..|+||||+|+. .|+.+++
T Consensus 145 ~~v~~Ll~~Gad~n~~d~---~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v 221 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYGDN---MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAA 221 (327)
T ss_dssp HHHHHHHHTTCCTTBCCT---TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHH
T ss_pred HHHHHHHHcCCCCCCcCC---CCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHH
Confidence 789999999999999997 5568899888864 456777776 7899999999999999999 8999999
Q ss_pred HHHHHHC-------------------CC-------------------------CccccccCCChHHHHHHHhCChHHHHH
Q 016455 71 KEIFNVY-------------------PQ-------------------------AVEHIDDEGRNILHVAIKYRQLEIFEL 106 (389)
Q Consensus 71 ~~Ll~~~-------------------~~-------------------------~~~~~d~~G~t~Lh~A~~~~~~~iv~~ 106 (389)
+.|++.. ++ +++.+|.+|+||||+|+++|+.+++++
T Consensus 222 ~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~ 301 (327)
T 1sw6_A 222 KYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 301 (327)
T ss_dssp HHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 9998431 11 478899999999999999999999999
Q ss_pred HHccCCcccccccccccCCcccchhccccC
Q 016455 107 VVQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 107 Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~ 136 (389)
|+++|++ ++.+|.+|+||||+|++.|
T Consensus 302 Ll~~Gad----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 302 LLDYGAD----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHTTCC----TTCCCTTSCCGGGGTCC--
T ss_pred HHHcCCC----CcccCCCCCCHHHHHHhcC
Confidence 9999999 9999999999999999864
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.86 E-value=1.7e-22 Score=193.27 Aligned_cols=172 Identities=15% Similarity=0.072 Sum_probs=133.7
Q ss_pred HHHHHHHhC----CCCCcc-----------------ccccCCCCcHHHHHccCCC--Chh---hHhhcCCCCCcCCCCCC
Q 016455 2 ELARFLIRR----DTSWEI-----------------TDSFQDQSKPKIHRYGANP--NAS---SVDQKGIGESSANDNAE 55 (389)
Q Consensus 2 e~v~~Ll~~----ga~vn~-----------------~d~~~~~~~~~lh~a~~~~--~~~---~Ll~~ga~~n~~d~~G~ 55 (389)
|++++|+++ |++++. .|. .+.++||.|+..+ ..+ +|+++|++++.+|..|.
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHC---KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEE---SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCC---CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 567777777 666665 554 5567899998877 544 89999999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHHHCCCC-----ccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccch
Q 016455 56 TPLFLATKSGCIEIVKEIFNVYPQA-----VEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLH 130 (389)
Q Consensus 56 tpLh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh 130 (389)
||||+|+..|+.+++++|+ +.+++ ++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||
T Consensus 175 t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMM-DTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID----VNMEDNEHTVPLY 249 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHH-HHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC----TTCCCTTSCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHH-hcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHH
Confidence 9999999999999999999 55666 999999999999999999999999999999999 9999999999999
Q ss_pred hccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 131 MTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 131 ~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
+|+..++.+++ .++++........ ............+..+.||++.++...
T Consensus 250 ~A~~~g~~~~v------~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~aa~~~ 300 (364)
T 3ljn_A 250 LSVRAAMVLLT------KELLQKTDVFLIQ-ACPYHNGTTVLPDRVVWLDFVPAAADP 300 (364)
T ss_dssp HHHHTCCHHHH------HHHHHHSCHHHHH-TCTTBSSSSBCGGGCCCCTTSCSSCCH
T ss_pred HHHHhChHHHH------HHHHHcCCchhhh-cCcccCcccccccccccccchhhhhcc
Confidence 99999998887 2222221110000 000001112345778889988776543
No 81
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=2.1e-22 Score=184.91 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=118.2
Q ss_pred CHHHHHHHhCCCCC-------ccccc-cCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCC--------------CCC
Q 016455 1 MELARFLIRRDTSW-------EITDS-FQDQSKPKIHRYGANPNAS---SVDQKGIGESSAND--------------NAE 55 (389)
Q Consensus 1 ~e~v~~Ll~~ga~v-------n~~d~-~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~--------------~G~ 55 (389)
.|++++|+++|+++ |.... ....+.+|||.|+..+..+ +|+++|++++.+|. .|.
T Consensus 70 ~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 149 (273)
T 2pnn_A 70 NDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGE 149 (273)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCB
T ss_pred hHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCC
Confidence 47899999998763 32111 1135678899998888765 89999999999987 799
Q ss_pred cHHHHHHHcCcHHHHHHHHHH--CCCCccccccCCChHHHHHHHhCC---------hHHHHHHHccCCccccccc-----
Q 016455 56 TPLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFELVVQMEVPMRRLVR----- 119 (389)
Q Consensus 56 tpLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~~~---------~~iv~~Ll~~g~~~~~~~~----- 119 (389)
||||+|+..|+.+++++|++. .|++++.+|.+|+||||+|+..|+ .+++++|+++|++ +|
T Consensus 150 tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~----~n~~~~~ 225 (273)
T 2pnn_A 150 LPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK----LHPTLKL 225 (273)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HCTTCCG
T ss_pred CHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh----ccccccc
Confidence 999999999999999999943 899999999999999999999998 7999999999988 65
Q ss_pred --ccccCCcccchhccccCCCccc
Q 016455 120 --KIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 120 --~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
.+|.+|+||||+|++.|+.+++
T Consensus 226 ~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 226 EEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccccCCCCCCHHHHHHHhChHHHH
Confidence 5999999999999999998877
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.86 E-value=1.1e-22 Score=176.51 Aligned_cols=131 Identities=15% Similarity=0.103 Sum_probs=112.7
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCC-------hhhHhhcCCCCCcCCCCCCcHHHHHHHcCc------HH
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPN-------ASSVDQKGIGESSANDNAETPLFLATKSGC------IE 68 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~-------~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~------~~ 68 (389)
+.++.+++.|. |..+. ..+.+|||.|+..+. +++|+++|+|+|.+|.+|+||||+|+..|+ .+
T Consensus 20 ~~~~~l~~~~~--~~~~~--~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 20 EDFLELFEKGY--EDKES--VLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHHHSS--SCHHH--HHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHhcCc--ccccc--cCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHH
Confidence 45667777664 34441 256789999998875 558999999999999999999999999987 68
Q ss_pred HHHHHHHHCCCCccccccCCC-hHHHHHHHhC-----ChHHHHHHHc-cCCcccccccccccCCcccchhccccCCCccc
Q 016455 69 IVKEIFNVYPQAVEHIDDEGR-NILHVAIKYR-----QLEIFELVVQ-MEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 69 ~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~~-----~~~iv~~Ll~-~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
++++|+ +.|+++|.+|..|+ ||||+|+..+ +.+++++|++ +|++ ++.+|.+|+||||+|++.++.+++
T Consensus 96 iv~~Ll-~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad----~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 96 LCKIFL-EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ----LLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp HHHHHH-HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred HHHHHH-HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC----CcccCCCCCCHHHHHHHcCCHHHH
Confidence 899999 78999999999999 9999999954 3569999999 9999 999999999999999999987766
No 83
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.85 E-value=1.2e-21 Score=181.46 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=104.1
Q ss_pred CCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHh
Q 016455 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.++||.|+..|..+ .|+++|+++|.+|.+|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..
T Consensus 57 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL-KHGAQVNGVTADWHTPLFNACVS 135 (285)
T ss_dssp CCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH-HTTCCSSCCCTTCCCHHHHHHHH
T ss_pred ccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHc
Confidence 46678899999888765 889999999999999999999999999999999999 77999999999999999999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+.+++++|++.|++ ++.. .+|+||||+|+..++.+++
T Consensus 136 ~~~~~v~~Ll~~g~~----~~~~-~~g~t~L~~A~~~g~~~~v 173 (285)
T 3d9h_A 136 GSWDCVNLLLQHGAS----VQPE-SDLASPIHEAARRGHVECV 173 (285)
T ss_dssp TCHHHHHHHHHTTCC----SSCS-CTTSCHHHHHHHHTCHHHH
T ss_pred CHHHHHHHHHHCCCC----CCCC-CCCCCHHHHHHHcCCHHHH
Confidence 999999999999988 6654 4599999999999987776
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.84 E-value=8.8e-22 Score=170.84 Aligned_cols=153 Identities=8% Similarity=0.011 Sum_probs=114.9
Q ss_pred HHHHHccCCCChh---hHhhcCCCCCcCC-CCCCcHHHHHHHcCcH----HHHHHHHHHCCCCccccccCCChHHHHHHH
Q 016455 26 PKIHRYGANPNAS---SVDQKGIGESSAN-DNAETPLFLATKSGCI----EIVKEIFNVYPQAVEHIDDEGRNILHVAIK 97 (389)
Q Consensus 26 ~~lh~a~~~~~~~---~Ll~~ga~~n~~d-~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 97 (389)
++++.|+..|..+ .+++.+ ++.++ ..|+||||+|+.+|+. +++++|+ +.|+++|.+|.+|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHH
Confidence 3478888888877 344444 45555 6799999999999975 5899999 7899999999999999999999
Q ss_pred hCC------hHHHHHHHccCCcccccccccccCCc-ccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhc--chh
Q 016455 98 YRQ------LEIFELVVQMEVPMRRLVRKIDNGGN-TLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVS--IPH 168 (389)
Q Consensus 98 ~~~------~~iv~~Ll~~g~~~~~~~~~~d~~G~-TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~--~~~ 168 (389)
.++ .+++++|+++|++ +|.+|.+|+ ||||+|+..+..+.. .. +.++.+. ...
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gad----in~~d~~g~ttpLh~A~~~~~~~~~------~~---------~iv~~Ll~~~ga 145 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGAD----ITALYKPYKIVVFKNIFNYFVDENE------MI---------PLYKLIFSQSGL 145 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCC----SSSCBGGGTBCTTGGGGGCCSCHHH------HH---------HHHHHHHTSTTC
T ss_pred cCCcchhhHHHHHHHHHHCCCC----CCccCCCcCchHHHHHHHcCCChhh------HH---------HHHHHHHHhcCC
Confidence 987 5789999999999 999999999 999999985543210 00 0011111 122
Q ss_pred hhhhccCCCCChHHHHhhhhh-hhHHhhHHHHH
Q 016455 169 FRNHRNNMGFTPEELFATANN-ELRTQSKEWLK 200 (389)
Q Consensus 169 ~~~~~n~~g~Tpl~la~~~~~-~~~~~~~~~~~ 200 (389)
.++.+|.+|+||+|+|.+.+. +..+...++.+
T Consensus 146 d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 368899999999999988654 33444444444
No 85
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.84 E-value=7e-22 Score=178.20 Aligned_cols=138 Identities=19% Similarity=0.135 Sum_probs=93.6
Q ss_pred CCcHHHHHccCCCCh---hhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNA---SSVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~---~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
++.++||.|+..+.. +.|+++|++++. +..|.||||.|+..|+.++++.|+ +.+++++.+|..|+||||+|+.+|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRII-YEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHT-STTSSCCCCCTTSCCHHHHHHHHT
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcC
Confidence 566788888877654 489999999986 477999999999999999999999 778899999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCC-
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGF- 178 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~- 178 (389)
+.+++++|+++|++ +|.+|.+|+||||+|+..++.+++ .+++..+ ..++.+|.+|.
T Consensus 82 ~~~~v~~Ll~~ga~----~~~~d~~g~tpL~~A~~~~~~~~v------~~Ll~~g-------------a~~~~~~~~~~~ 138 (239)
T 1ycs_B 82 HTEIVKFLVQFGVN----VNAADSDGWTPLHCAASCNNVQVC------KFLVESG-------------AAVFAMTYSDMQ 138 (239)
T ss_dssp CHHHHHHHHHHTCC----TTCCCTTCCCHHHHHHHTTCHHHH------HHHHHTT-------------CCTTCCCSSSCC
T ss_pred CHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHH------HHHHHcC-------------CCcceecCCCCc
Confidence 99999999999998 999999999999999999988776 2221111 11466776666
Q ss_pred ChHHHHh
Q 016455 179 TPEELFA 185 (389)
Q Consensus 179 Tpl~la~ 185 (389)
||+|++.
T Consensus 139 t~l~~a~ 145 (239)
T 1ycs_B 139 TAADKCE 145 (239)
T ss_dssp CHHHHCC
T ss_pred chHHHHH
Confidence 9999983
No 86
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=6.8e-21 Score=164.48 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=100.3
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccc-cCCChHHHHHHHh
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHID-DEGRNILHVAIKY 98 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~ 98 (389)
.+.+|+|.|+..+..+ .|++ |+++|.+|..|+||||+|+..|+.+++++|+ +.|++++.+| ..|+||||+|+..
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~~~ 120 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGY 120 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHhc
Confidence 5568899999988766 7778 9999999999999999999999999999999 7899999998 8999999999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhccccCC
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRS 137 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~ 137 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|++.++
T Consensus 121 ~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 121 VRPEVVEALVELGAD----IEVEDERGLTALELAREILK 155 (183)
T ss_dssp TCHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCC----CcCCCCCCCCHHHHHHHhcc
Confidence 999999999999998 99999999999999987543
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.83 E-value=5.8e-21 Score=180.69 Aligned_cols=131 Identities=14% Similarity=0.220 Sum_probs=114.2
Q ss_pred HHHHHHHh-CCCCCccccccCCCCcHHHHHccCCCCh----hhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHH
Q 016455 2 ELARFLIR-RDTSWEITDSFQDQSKPKIHRYGANPNA----SSVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNV 76 (389)
Q Consensus 2 e~v~~Ll~-~ga~vn~~d~~~~~~~~~lh~a~~~~~~----~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~ 76 (389)
|++++|++ .|+++|..|..+.+.++....++..+.. ++|+++|+++|.+|.+|+||||+|+..|+.++++.|++.
T Consensus 182 ~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred HHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 78999995 6999999998666555444445555543 478999999999999999999999999999999999977
Q ss_pred CCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 77 YPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 77 ~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
.+.+++.+|.+|+||||+|+++|+.+++++|+++|++ +|. .||||+|++.++.+++
T Consensus 262 ~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd----~n~-----~~~L~~A~~~~~~~iv 317 (337)
T 4g8k_A 262 EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDC-----GDLVMTARRNYDHSLV 317 (337)
T ss_dssp TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS----STT-----CCHHHHHHHTTCHHHH
T ss_pred cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCC-----CCHHHHHHHcCCHHHH
Confidence 7999999999999999999999999999999999998 665 4599999999998877
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=3.8e-21 Score=154.57 Aligned_cols=113 Identities=27% Similarity=0.391 Sum_probs=104.7
Q ss_pred CcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCC
Q 016455 24 SKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 24 ~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~ 100 (389)
+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+.+++.+|..|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCh
Confidence 456788888877655 889999999999999999999999999999999999 7899999999999999999999999
Q ss_pred hHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 101 LEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 101 ~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 81 ~~~~~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 81 LEVVKLLLEAGAD----VNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCcHHHH
Confidence 9999999999998 999999999999999999887766
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1e-20 Score=171.26 Aligned_cols=107 Identities=18% Similarity=0.238 Sum_probs=99.8
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccc-cCCChHHHHHHHh
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHID-DEGRNILHVAIKY 98 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~~ 98 (389)
.+.++||.|+..+..+ .|++ |+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+| ..|+||||+|+.+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHHc
Confidence 4568999999998866 6777 9999999999999999999999999999999 7899999998 8899999999999
Q ss_pred CChHHHHHHHccCCcccccccccccCCcccchhcccc
Q 016455 99 RQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIK 135 (389)
Q Consensus 99 ~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~ 135 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 122 g~~~~v~~Ll~~ga~----~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 122 VRPEVVEALVELGAD----IEVEDERGLTALELAREI 154 (244)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCC----CCCCCCCCCcHHHHHHHH
Confidence 999999999999999 999999999999999853
No 90
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.83 E-value=2.3e-20 Score=153.07 Aligned_cols=107 Identities=14% Similarity=0.109 Sum_probs=99.2
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCC-CCcHHHHHHHcCcHHHHHHHHHHC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDN-AETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~-G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|.+|. .+.+|||.|+. +..+ +|+++|++++.+|.. |.||||+|+..|+.+++++|+ +.
T Consensus 26 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 100 (136)
T 1d9s_A 26 ETVRQLLEAGADPNALNR---FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RA 100 (136)
T ss_dssp HHHHHHHHTTCCTTCCCT---TCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCcCCcCC---CCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 789999999999999986 55678899988 7665 899999999999999 999999999999999999999 78
Q ss_pred CCCccccccCCChHHHHHHHhCChHHHHHHHccCCc
Q 016455 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVP 113 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 113 (389)
+++++.+|..|+||||+|+.+++.+++++|+++|++
T Consensus 101 ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 101 GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999874
No 91
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.82 E-value=1e-20 Score=169.23 Aligned_cols=133 Identities=20% Similarity=0.228 Sum_probs=73.9
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+. ..+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.++++.|+ +.+
T Consensus 56 ~~v~~Ll~~~~~~~~~~~--~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~~ 132 (240)
T 3eu9_A 56 DLVKYYISKGAIVDQLGG--DLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLI-AKG 132 (240)
T ss_dssp HHHHHHHHTTCCTTCCBT--TTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCcchhhcC--CcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHH-hcC
Confidence 456666666665554332 22345555555544433 555666666666666666666666666666666666 445
Q ss_pred CCccccccCCChHHHHHHHhCC-hHHHHHHHccCCccccccccccc-CCcccchhccccCCCccc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQ-LEIFELVVQMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~-~~iv~~Ll~~g~~~~~~~~~~d~-~G~TpLh~A~~~~~~~~~ 141 (389)
.+++.+|..|+||||+|+..++ .+++++|++.|++ ++..+. +|+||||+|+..++.+++
T Consensus 133 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v 193 (240)
T 3eu9_A 133 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNTTVI 193 (240)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCHHHH
T ss_pred CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCHHHH
Confidence 5555555555555555554443 4555555555555 555554 555555555555554444
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=2e-20 Score=174.62 Aligned_cols=126 Identities=15% Similarity=0.028 Sum_probs=102.0
Q ss_pred HHHHHHHhCCCCCccccc---cCCCCcHHHHHccCC---CC---hhhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEITDS---FQDQSKPKIHRYGAN---PN---ASSVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~---~~~~~~~~lh~a~~~---~~---~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+.++.|++.|+++|.... ....+.++||.|+.. +. +++|+++|+++|.+|.+|+||||+|+..|+.+++++
T Consensus 165 ~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 244 (301)
T 2b0o_E 165 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 244 (301)
T ss_dssp HHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 568889999999987310 113667889988765 44 448999999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCC
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSD 138 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~ 138 (389)
|+ +.|++++.+|.+|+||||+|+..|+.+++++|++.|++ .|+||||+|++.|+.
T Consensus 245 Ll-~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 245 LL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HH-HTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----------TTSSCCC--------
T ss_pred HH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----------CCCChhHHHHhcCCc
Confidence 99 78999999999999999999999999999999998754 589999999988764
No 93
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=4.7e-21 Score=170.48 Aligned_cols=117 Identities=16% Similarity=0.183 Sum_probs=106.5
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
.+.++||.|+..+..+ .|+++|+++|.+|..|+||||+|+..|+.+++++|++..+++++.+|..|+||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 3457899998888765 8899999999999999999999999999999999995459999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccchhccccCCCccccc
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEK 143 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~ 143 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.
T Consensus 152 ~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~l~~ 191 (222)
T 3ehr_A 152 YADIVQLLLAKGAR----TDLRNIEKKLAFDMATNAACASLLKK 191 (222)
T ss_dssp CHHHHHHHHHHTCC----SCCCCTTSCCHHHHCCSHHHHHHHC-
T ss_pred CHHHHHHHHHcCCC----CccccCCCCCHHHHhcchhHHHHHHH
Confidence 99999999999999 99999999999999999887776643
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=176.44 Aligned_cols=134 Identities=19% Similarity=0.171 Sum_probs=111.5
Q ss_pred cHHHHHccCCCChh---hHhhcCCCCCc------CCCCCCcHHHHHHHc---CcHHHHHHHHHHCCCCccccccCCChHH
Q 016455 25 KPKIHRYGANPNAS---SVDQKGIGESS------ANDNAETPLFLATKS---GCIEIVKEIFNVYPQAVEHIDDEGRNIL 92 (389)
Q Consensus 25 ~~~lh~a~~~~~~~---~Ll~~ga~~n~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 92 (389)
..++|.|+..+..+ .|++.|+|++. .|..|+||||+|+.. |+.+++++|+ .+|++++.+|.+|+|||
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCCHH
Confidence 35688898888766 67899999988 688999999999997 8999999999 66999999999999999
Q ss_pred HHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhh
Q 016455 93 HVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNH 172 (389)
Q Consensus 93 h~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~ 172 (389)
|+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .++++ .
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~~~~~iv------~~Ll~-------------------~ 281 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRAL----VGTVNEAGETALDIARKKHHKECE------ELLEQ-------------------A 281 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----CSCCCTTSCCHHHHHHHHTCHHHH------HHHHH-------------------H
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHH------HHHHH-------------------h
Confidence 999999999999999999999 999999999999999999987776 22211 1
Q ss_pred ccCCCCChHHHHhhhh
Q 016455 173 RNNMGFTPEELFATAN 188 (389)
Q Consensus 173 ~n~~g~Tpl~la~~~~ 188 (389)
....|.||+|+|++.+
T Consensus 282 ga~~g~tpLh~A~~~g 297 (301)
T 2b0o_E 282 QAGTFAFPLHVDYSWV 297 (301)
T ss_dssp HHHTTSSCCC------
T ss_pred cCCCCCChhHHHHhcC
Confidence 2226899999998754
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=9.9e-21 Score=152.40 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=95.7
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccch
Q 016455 51 NDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLH 130 (389)
Q Consensus 51 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh 130 (389)
+..|.||||+|+..|+.++++.|+ +.+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~tpL~ 78 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD----INAPDKHHITPLL 78 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCHHH
Confidence 567899999999999999999999 78899999999999999999999999999999999998 9999999999999
Q ss_pred hccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhh
Q 016455 131 MTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFAT 186 (389)
Q Consensus 131 ~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~ 186 (389)
+|+..++.+++ .++++. . ...+.+|.+|+||+++|.+
T Consensus 79 ~A~~~~~~~~v------~~Ll~~------g-------a~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 79 SAVYEGHVSCV------KLLLSK------G-------ADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHTCHHHH------HHHHHT------T-------CCTTCCCTTSCCHHHHCCC
T ss_pred HHHHcCCHHHH------HHHHHc------C-------CCCCCcCCCCCCHHHHhCC
Confidence 99999987766 111111 0 1157889999999999854
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.81 E-value=4.9e-20 Score=176.41 Aligned_cols=143 Identities=16% Similarity=0.152 Sum_probs=107.2
Q ss_pred CcHHHHHccCC-CChh---hHhhcCCCCCcCC--CCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHH
Q 016455 24 SKPKIHRYGAN-PNAS---SVDQKGIGESSAN--DNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIK 97 (389)
Q Consensus 24 ~~~~lh~a~~~-~~~~---~Ll~~ga~~n~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 97 (389)
+.++||.|+.. +..+ .|+++|+|+|..| .+|.||||+|+..|+.+++++|+ .+|++++.+|..|+||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHH
Confidence 34689999988 7765 7899999999988 88999999999999999999999 7899999999999999999999
Q ss_pred hCChHHHHHHHccCCcccccccccccCCcccchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCC
Q 016455 98 YRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMG 177 (389)
Q Consensus 98 ~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g 177 (389)
.|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++ .+++.... ........+..+
T Consensus 278 ~g~~~~v~~LL~~Gad----~~~~d~~G~TpL~~A~~~g~~~iv------~lLl~~~~----------~~~~~~~~~~~~ 337 (368)
T 3jue_A 278 LGHTGLACLFLKRGAD----LGARDSEGRDPLTIAMETANADIV------TLLRLAKM----------REAEAAQGQAGD 337 (368)
T ss_dssp HTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH------HHHHHHHC----------------------
T ss_pred cCcHHHHHHHHHCcCC----CCCcCCCCCCHHHHHHHCCCHHHH------HHHHHcCC----------CcccccccCCCC
Confidence 9999999999999999 999999999999999999988777 22221111 011124556788
Q ss_pred CChHHHHhhh
Q 016455 178 FTPEELFATA 187 (389)
Q Consensus 178 ~Tpl~la~~~ 187 (389)
.|+++++...
T Consensus 338 ~t~l~i~~~~ 347 (368)
T 3jue_A 338 ETYLDIFRDF 347 (368)
T ss_dssp ----------
T ss_pred CCHHHHHHHH
Confidence 8999987764
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.81 E-value=1.1e-19 Score=148.91 Aligned_cols=106 Identities=17% Similarity=0.227 Sum_probs=96.9
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..|. .+.++||.|+..+..+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 28 ~~v~~Ll~~g~~~~~~~~---~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~g 103 (136)
T 2jab_A 28 DEVRILMANGADVNAKDE---YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL-KHG 103 (136)
T ss_dssp HHHHHHHHTTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCcCC---CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 789999999999999986 4557788888777654 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccC
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQME 111 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g 111 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|
T Consensus 104 ~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 104 ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999875
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=1.5e-20 Score=162.28 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=98.8
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccc-cCCcccc
Q 016455 51 NDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKID-NGGNTLL 129 (389)
Q Consensus 51 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d-~~G~TpL 129 (389)
|.+|.||||+|+..|+.++++.|++ +.+++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+| .+|+|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----LDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCSSSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCCHH
Confidence 5689999999999999999999994 889999999999999999999999999999999998 99998 8999999
Q ss_pred hhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhhh
Q 016455 130 HMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 130 h~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~~ 189 (389)
|+|+..++.+++ .+++..+ ..++.+|.+|+||+|+|.+..+
T Consensus 115 ~~A~~~~~~~~v------~~Ll~~g-------------a~~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 115 HMAAGYVRPEVV------EALVELG-------------ADIEVEDERGLTALELAREILK 155 (183)
T ss_dssp HHHHHTTCHHHH------HHHHHHT-------------CCTTCCCTTSCCHHHHHHHHHH
T ss_pred HHHHhcCcHHHH------HHHHHcC-------------CCCcCCCCCCCCHHHHHHHhcc
Confidence 999999987776 2222111 1157889999999999987543
No 99
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=7.7e-20 Score=139.71 Aligned_cols=84 Identities=32% Similarity=0.467 Sum_probs=67.0
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhc
Q 016455 53 NAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMT 132 (389)
Q Consensus 53 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A 132 (389)
+|+||||+|+..|+.+++++|+ +.|++++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD----VNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHH
Confidence 4778888888888888888888 66788888888888888888888888888888888877 788888888888888
Q ss_pred cccCCCccc
Q 016455 133 GIKRSDYVP 141 (389)
Q Consensus 133 ~~~~~~~~~ 141 (389)
+..++.+++
T Consensus 76 ~~~~~~~~~ 84 (93)
T 1n0q_A 76 ARNGHLEVV 84 (93)
T ss_dssp HHTTCHHHH
T ss_pred HHcCCHHHH
Confidence 887776655
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=5.1e-19 Score=142.03 Aligned_cols=108 Identities=24% Similarity=0.404 Sum_probs=98.9
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..|. .+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 16 ~~v~~Ll~~~~~~~~~~~---~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~g 91 (126)
T 1n0r_A 16 EVVKLLLEAGADVNAKDK---NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAG 91 (126)
T ss_dssp HHHHHHHHHTCCTTCCCT---TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCcCC---CCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH-HcC
Confidence 689999999999998886 4557788887777655 889999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCc
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVP 113 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~ 113 (389)
.+++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 92 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 92 ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999874
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=4.6e-19 Score=163.58 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=101.8
Q ss_pred cHHHHHccCCCChh---hHhhcCCCCC------cCCCCCCcHHHHHHHc---CcHHHHHHHHHHCCCCccccccCCChHH
Q 016455 25 KPKIHRYGANPNAS---SVDQKGIGES------SANDNAETPLFLATKS---GCIEIVKEIFNVYPQAVEHIDDEGRNIL 92 (389)
Q Consensus 25 ~~~lh~a~~~~~~~---~Ll~~ga~~n------~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 92 (389)
..+++.|+..+..+ .+++.|++++ ..|..|+||||+|+.. |+.+++++|+ +.|+++|.+|.+|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCCHH
Confidence 45688888888766 5788899954 4588999999999999 8999999999 66999999999999999
Q ss_pred HHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 93 HVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 93 h~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
|+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad----~~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS----IEIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCCccCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999 999999999999999999987776
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=9e-19 Score=133.70 Aligned_cols=89 Identities=26% Similarity=0.411 Sum_probs=82.0
Q ss_pred CcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCC
Q 016455 24 SKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 24 ~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~ 100 (389)
+.+|||.|+..+..+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ +.|++++.+|.+|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCC
Confidence 346789888877655 889999999999999999999999999999999999 7899999999999999999999999
Q ss_pred hHHHHHHHccCCc
Q 016455 101 LEIFELVVQMEVP 113 (389)
Q Consensus 101 ~~iv~~Ll~~g~~ 113 (389)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999874
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.76 E-value=1.4e-19 Score=160.91 Aligned_cols=116 Identities=20% Similarity=0.240 Sum_probs=100.6
Q ss_pred cCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHcc-CCcccccccccccCCcc
Q 016455 49 SANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQM-EVPMRRLVRKIDNGGNT 127 (389)
Q Consensus 49 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~~d~~G~T 127 (389)
..|.+|.||||+|+..|+.++++.|+ +.+.+++.+|..|+||||+|+.+|+.+++++|++. |++ ++.+|.+|+|
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----~~~~d~~g~t 142 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECL-DNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE----LNQQNKLGDT 142 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC----CCCCCTTSCC
T ss_pred ccccccccccccccccCcHHHHHHHH-hCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC----ccccCCCCCC
Confidence 34667899999999999999999999 78999999999999999999999999999999998 888 9999999999
Q ss_pred cchhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 128 LLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 128 pLh~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
|||+|+..++.+++ .+++..+. .++.+|.+|+||+++|.+..
T Consensus 143 pL~~A~~~~~~~~v------~~Ll~~ga-------------~~~~~~~~g~t~l~~A~~~~ 184 (222)
T 3ehr_A 143 ALHAAAWKGYADIV------QLLLAKGA-------------RTDLRNIEKKLAFDMATNAA 184 (222)
T ss_dssp HHHHHHHHTCHHHH------HHHHHHTC-------------CSCCCCTTSCCHHHHCCSHH
T ss_pred HHHHHHHcCCHHHH------HHHHHcCC-------------CCccccCCCCCHHHHhcchh
Confidence 99999999988776 22222111 15788999999999998743
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=1.9e-18 Score=172.45 Aligned_cols=122 Identities=16% Similarity=0.070 Sum_probs=96.6
Q ss_pred HHHHHHHhCCCCCcccc---ccCCCCcHHHHHc---cCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEITD---SFQDQSKPKIHRY---GANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d---~~~~~~~~~lh~a---~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+.++.|+++|+|+|... .....+.+|||.| +..+..+ +|+++|+|+|.+|.+|+||||+|+..|+.+++++
T Consensus 146 ~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 146 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 67899999999998771 1123667889988 5566544 8999999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccc
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGI 134 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~ 134 (389)
|+ ++|++++.+|.+|+||||+|+..|+.+++++|+++|++ ++. +|+|.+..
T Consensus 226 Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~~~------~~~h~~~~ 276 (497)
T 3lvq_E 226 LL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----TFA------FPLHVDYS 276 (497)
T ss_dssp HH-HTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----------------------
T ss_pred HH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC----CCC------Ccceeecc
Confidence 99 78999999999999999999999999999999999988 554 57777654
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=5.7e-19 Score=176.18 Aligned_cols=111 Identities=19% Similarity=0.228 Sum_probs=103.5
Q ss_pred HHHHHccCCCChh---hHhhcCCCCCcC------CCCCCcHHHHHHH---cCcHHHHHHHHHHCCCCccccccCCChHHH
Q 016455 26 PKIHRYGANPNAS---SVDQKGIGESSA------NDNAETPLFLATK---SGCIEIVKEIFNVYPQAVEHIDDEGRNILH 93 (389)
Q Consensus 26 ~~lh~a~~~~~~~---~Ll~~ga~~n~~------d~~G~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 93 (389)
..||.|+..+..+ .|+++|+|+|.+ |..|+||||+|+. .|+.+++++|+ ++|+++|.+|.+|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcHHH
Confidence 5688888888766 889999999977 8899999999976 89999999999 679999999999999999
Q ss_pred HHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 94 VAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 94 ~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..++.+++
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~ 256 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRAL----VGTVNEAGETALDIARKKHHKECE 256 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCC----CSCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999 999999999999999999998877
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=7.2e-20 Score=165.61 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=97.6
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccc-cCCcccc
Q 016455 51 NDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKID-NGGNTLL 129 (389)
Q Consensus 51 d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d-~~G~TpL 129 (389)
+.+|.||||+|++.|+.++++.|++ +.+++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+| .+|+|||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~g~t~L 115 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----LDHRDMRGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTCCCSSSCCCHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCcCCCCCCCCHH
Confidence 4579999999999999999999994 889999999999999999999999999999999999 99998 8899999
Q ss_pred hhccccCCCcccccCCChhHHhhHHHHHHHHHHhhcchhhhhhccCCCCChHHHHhhhh
Q 016455 130 HMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSIPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 130 h~A~~~~~~~~~~~l~~~~l~l~~~~~~~~~v~~~~~~~~~~~~n~~g~Tpl~la~~~~ 188 (389)
|+|+..++.+++ .+++..+ ..++.+|.+|+||+|+|++..
T Consensus 116 ~~A~~~g~~~~v------~~Ll~~g-------------a~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 116 HMAAGYVRPEVV------EALVELG-------------ADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp HHHHHTTCHHHH------HHHHHTT-------------CCTTCCCTTCCCHHHHHHHHH
T ss_pred HHHHHcCCHHHH------HHHHHCC-------------CCCCCCCCCCCcHHHHHHHHH
Confidence 999999988776 2221111 115778999999999998643
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=4.5e-19 Score=140.75 Aligned_cols=87 Identities=26% Similarity=0.341 Sum_probs=47.5
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccc
Q 016455 50 ANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLL 129 (389)
Q Consensus 50 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 129 (389)
+|.+|+||||+|+..|+.++++.|+ +.+.+++.+|..|+||||+|+..++.+++++|+++|++ ++.+|.+|+|||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~d~~g~tpl 79 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----VNARSKDGNTPE 79 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC----TTCCCTTCCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CcccCCCCCCHH
Confidence 3455555555555555555555555 44555555555555555555555555555555555555 555555555555
Q ss_pred hhccccCCCccc
Q 016455 130 HMTGIKRSDYVP 141 (389)
Q Consensus 130 h~A~~~~~~~~~ 141 (389)
|+|+..++.+++
T Consensus 80 ~~A~~~~~~~~~ 91 (115)
T 2l6b_A 80 HLAKKNGHHEIV 91 (115)
T ss_dssp HHHHTTTCHHHH
T ss_pred HHHHHCCCHHHH
Confidence 555555544433
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.75 E-value=2.6e-18 Score=158.47 Aligned_cols=121 Identities=12% Similarity=0.018 Sum_probs=103.4
Q ss_pred HHHHHHHhCCCCCccc---cccCCCCcHHHHHccCC---CC---hhhHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHH
Q 016455 2 ELARFLIRRDTSWEIT---DSFQDQSKPKIHRYGAN---PN---ASSVDQKGIGESSANDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~---d~~~~~~~~~lh~a~~~---~~---~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+.++.+++.|++++.. +.....+.+|||.|+.. +. +++|+++|+++|.+|.+|+||||+|+..|+.+++++
T Consensus 144 ~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~ 223 (278)
T 1dcq_A 144 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL 223 (278)
T ss_dssp HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 4577899999996643 11224567889999876 54 448999999999999999999999999999999999
Q ss_pred HHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhcccc
Q 016455 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIK 135 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~ 135 (389)
|+ +.|++++.+|.+|+||||+|+..|+.+++++|+++|++ .+++|.++..
T Consensus 224 Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------~~~~~~~v~~ 273 (278)
T 1dcq_A 224 LL-RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG------------RFNSHVHVEY 273 (278)
T ss_dssp HH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT------------CCCSSCCCCC
T ss_pred HH-HcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCCcceeeec
Confidence 99 78999999999999999999999999999999998864 5778877754
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=7.6e-19 Score=139.46 Aligned_cols=102 Identities=25% Similarity=0.307 Sum_probs=92.7
Q ss_pred CCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhC
Q 016455 23 QSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~ 99 (389)
.+.+++|.|+..+..+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+..+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT-TTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHCC
Confidence 5567889888877655 889999999999999999999999999999999999 779999999999999999999999
Q ss_pred ChHHHHHHHccCCcccccccccccCCcccc
Q 016455 100 QLEIFELVVQMEVPMRRLVRKIDNGGNTLL 129 (389)
Q Consensus 100 ~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpL 129 (389)
+.+++++|+++|++ +|.++.+|.||-
T Consensus 87 ~~~~~~~Ll~~ga~----~n~~~~~~~~~~ 112 (115)
T 2l6b_A 87 HHEIVKLLDAKGAD----VNARSWGSSHHH 112 (115)
T ss_dssp CHHHHHHHHTTSSS----HHHHSCCCC---
T ss_pred CHHHHHHHHHcCCC----CCcCCccccccc
Confidence 99999999999999 999999999883
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.74 E-value=5.2e-18 Score=162.33 Aligned_cols=132 Identities=15% Similarity=0.113 Sum_probs=99.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCC
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
++++.|+++|+++|..+.+ ..+.++||.|+..+..+ +|+++|+++|.+|..|+||||+|+..|+.+++++|+ ..|
T Consensus 214 ~~v~~LL~~Gadvn~~~~~-~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL-~~G 291 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGG-QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFL-KRG 291 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCccccc-cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HCc
Confidence 6889999999999988732 24567899998888755 899999999999999999999999999999999999 789
Q ss_pred CCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCcccchhccccC
Q 016455 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~ 136 (389)
++++.+|.+|+||||+|+..++.+++++|++.+.. .......+..+.|+++++....
T Consensus 292 ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~-~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 292 ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR-EAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-cccccccCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999987643 2224456677889998877543
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=2.3e-18 Score=135.83 Aligned_cols=90 Identities=20% Similarity=0.267 Sum_probs=81.0
Q ss_pred CCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHhCChHHHHHHHccCCcccccccccccCCc
Q 016455 47 ESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVVQMEVPMRRLVRKIDNGGN 126 (389)
Q Consensus 47 ~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~ 126 (389)
++..|.+|.||||+|+..|+.+++++|+ ..+++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~ 91 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD----VXAQDKFGK 91 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccccCCC
Confidence 3566889999999999999999999999 77999999999999999999999999999999999998 999999999
Q ss_pred ccchhccccCCCccc
Q 016455 127 TLLHMTGIKRSDYVP 141 (389)
Q Consensus 127 TpLh~A~~~~~~~~~ 141 (389)
||||+|+..++.+++
T Consensus 92 tpl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 92 TAFDISIDNGNEDLA 106 (110)
T ss_dssp CHHHHHHHHTCHHHH
T ss_pred cHHHHHHHcCCHHHH
Confidence 999999999887665
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.70 E-value=6e-19 Score=169.41 Aligned_cols=111 Identities=7% Similarity=0.057 Sum_probs=91.1
Q ss_pred cHHHHHccCCCChh---hHhhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCC---ccccccCCChHHHHH
Q 016455 25 KPKIHRYGANPNAS---SVDQKGIGE---SSANDNAETPLFLATKSGCIEIVKEIFNVYPQA---VEHIDDEGRNILHVA 95 (389)
Q Consensus 25 ~~~lh~a~~~~~~~---~Ll~~ga~~---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~---~~~~d~~G~t~Lh~A 95 (389)
.+|||.|+..|..+ .|+++|+.. +..|..|.||||+|+++|+.+++++|+ +.|++ .+..+.+ +||||+|
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll-~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC-ELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH-HSCTTTHHHHHSHHH-HHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH-hCCCCccccccCCCC-CCHHHHH
Confidence 38899999888766 888998833 234557889999999999999999999 66754 2333333 9999999
Q ss_pred HHhCChHHHHHHHccCCcccccccc--cccCCcccchhcc-ccCCCccc
Q 016455 96 IKYRQLEIFELVVQMEVPMRRLVRK--IDNGGNTLLHMTG-IKRSDYVP 141 (389)
Q Consensus 96 ~~~~~~~iv~~Ll~~g~~~~~~~~~--~d~~G~TpLh~A~-~~~~~~~~ 141 (389)
+.+|+.+++++|+++|++ ++. +|.+|+||||+|+ ..|+.+++
T Consensus 171 a~~G~~eiv~~Ll~~ga~----~~~~~~d~~g~TpL~~Aa~~~G~~eiv 215 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPT----EATAMIQAENYYAFRWAAVGRGHHNVI 215 (376)
T ss_dssp HHTTCHHHHHHHHHSCGG----GHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred HHCCCHHHHHHHHHcCCc----cchhccCCCCCCHHHHHHHHCCCHHHH
Confidence 999999999999999988 777 8999999999999 99998887
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.66 E-value=9.5e-18 Score=161.04 Aligned_cols=127 Identities=14% Similarity=0.048 Sum_probs=102.0
Q ss_pred HHHHHHHhCCCCCccccccCCCCcHHHHHccCCCChh---hHhhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHH
Q 016455 2 ELARFLIRRDTSWEITDSFQDQSKPKIHRYGANPNAS---SVDQKGIGE---SSANDNAETPLFLATKSGCIEIVKEIFN 75 (389)
Q Consensus 2 e~v~~Ll~~ga~vn~~d~~~~~~~~~lh~a~~~~~~~---~Ll~~ga~~---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~ 75 (389)
|++++|+++|+.....+.....+.+|||.|+..|..+ +|+++|+|+ +..+.+ .||||+|+.+|+.+++++|+
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll- 183 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLC- 183 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHH-
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHH-
Confidence 7899999999832211111123456899999988766 899999873 333333 99999999999999999999
Q ss_pred HCCCCccc--cccCCChHHHHHH-HhCChHHHHHHHccCCcccccccccccCCcccchhccccCCCccc
Q 016455 76 VYPQAVEH--IDDEGRNILHVAI-KYRQLEIFELVVQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 76 ~~~~~~~~--~d~~G~t~Lh~A~-~~~~~~iv~~Ll~~g~~~~~~~~~~d~~G~TpLh~A~~~~~~~~~ 141 (389)
+.|++++. .|.+|+||||+|+ .+|+.+++++|++.|+ .|+||||+|+..|+.+++
T Consensus 184 ~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-----------~~~taL~~Aa~~g~~evv 241 (376)
T 2aja_A 184 ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-----------MLAYAEIHEFEYGEKYVN 241 (376)
T ss_dssp HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----------HHHHHHHCTTTTTTTTHH
T ss_pred HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----------ccchHHHHHHHCCCHHHH
Confidence 77888887 8999999999999 9999999999999763 289999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=1.5e-15 Score=119.52 Aligned_cols=85 Identities=20% Similarity=0.318 Sum_probs=78.6
Q ss_pred CCCcHHHHHccCCCChh---hHhhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHHHCCCCccccccCCChHHHHHHHh
Q 016455 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSANDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.+++|.|+..+..+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ ..|++++.+|..|+||||+|+..
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcHHHHHHHc
Confidence 35668899998888765 789999999999999999999999999999999999 77999999999999999999999
Q ss_pred CChHHHHHH
Q 016455 99 RQLEIFELV 107 (389)
Q Consensus 99 ~~~~iv~~L 107 (389)
|+.+++++|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999986
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=25.18 E-value=77 Score=28.75 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 016455 290 TFLFLSACLMTVAFAATILLM 310 (389)
Q Consensus 290 ~~l~~s~~~m~~af~~~~~~~ 310 (389)
.+..+++..+..+|.+|+|-|
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 356678888889999999964
No 116
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=20.71 E-value=69 Score=29.44 Aligned_cols=21 Identities=24% Similarity=0.403 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhh
Q 016455 290 TFLFLSACLMTVAFAATILLM 310 (389)
Q Consensus 290 ~~l~~s~~~m~~af~~~~~~~ 310 (389)
.+..+++..+..+|.||+|-|
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 356778888899999999854
Done!