Your job contains 1 sequence.
>016456
MNGYAGANARRRASLDKQGPTVVHQKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRM
YVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGS
PDGRVRYKFASFWNRNHALRQLQRIAKNYHKMLEAEKKEKAESALRAHSSSIRGSRRQAK
IAEETVTKPEKLQPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNL
VMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHD
VPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLE
TARSYIKTRTSGGETNNQSSTPSVTPDCN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016456
(389 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097578 - symbol:AT3G59660 "AT3G59660" species... 1455 4.8e-149 1
DICTYBASE|DDB_G0267942 - symbol:DDB_G0267942 "GRAM domain... 195 2.2e-22 3
RGD|1305443 - symbol:Gramd1b "GRAM domain containing 1B" ... 150 1.4e-15 2
TAIR|locus:2205625 - symbol:VAD1 "VASCULAR ASSOCIATED DEA... 151 2.5e-15 2
UNIPROTKB|Q3KR37 - symbol:GRAMD1B "GRAM domain-containing... 145 5.2e-15 2
MGI|MGI:1925037 - symbol:Gramd1b "GRAM domain containing ... 145 5.2e-15 2
UNIPROTKB|Q8IYS0 - symbol:GRAMD1C "GRAM domain-containing... 145 2.6e-14 2
WB|WBGene00022593 - symbol:ZC328.3 species:6239 "Caenorha... 134 5.5e-14 2
POMBASE|SPBC20F10.07 - symbol:SPBC20F10.07 "GRAM domain p... 156 8.5e-13 2
MGI|MGI:105490 - symbol:Gramd1a "GRAM domain containing 1... 122 1.4e-10 2
UNIPROTKB|Q96CP6 - symbol:GRAMD1A "GRAM domain-containing... 122 1.4e-10 2
SGD|S000002734 - symbol:YSP2 "Protein involved in program... 118 1.8e-10 2
RGD|1311022 - symbol:Gramd1a "GRAM domain containing 1A" ... 122 2.2e-10 2
UNIPROTKB|Q69V64 - symbol:P0556B08.10 "C2 domain-containi... 162 2.8e-09 1
TAIR|locus:2157707 - symbol:AT5G50170 "AT5G50170" species... 132 1.5e-08 2
UNIPROTKB|Q66VB0 - symbol:Os06g0607900 "Os06g0607900 prot... 162 1.8e-08 1
CGD|CAL0001781 - symbol:orf19.4423 species:5476 "Candida ... 115 5.8e-08 2
UNIPROTKB|Q59WE7 - symbol:CaO19.11901 "Potential GRAM dom... 115 5.8e-08 2
UNIPROTKB|Q5Z6I4 - symbol:OSJNBa0055N24.36 "Putative Osno... 153 1.7e-07 1
MGI|MGI:3528937 - symbol:Gramd2 "GRAM domain containing 2... 143 3.3e-07 1
UNIPROTKB|Q8IUY3 - symbol:GRAMD2 "GRAM domain-containing ... 141 6.9e-07 1
UNIPROTKB|Q96HH9 - symbol:GRAMD3 "GRAM domain-containing ... 141 1.0e-06 1
SGD|S000004062 - symbol:YLR072W "Protein of unknown funct... 105 1.1e-06 2
SGD|S000001852 - symbol:YFL042C "Putative protein of unkn... 129 1.7e-06 2
MGI|MGI:1914815 - symbol:Gramd3 "GRAM domain containing 3... 138 2.3e-06 1
RGD|1311016 - symbol:Gramd3 "GRAM domain containing 3" sp... 138 2.3e-06 1
MGI|MGI:2443024 - symbol:Gramd1c "GRAM domain containing ... 132 1.1e-05 1
SGD|S000001122 - symbol:YHR080C "Protein of unknown funct... 112 6.8e-05 3
ASPGD|ASPL0000050763 - symbol:AN2215 species:162425 "Emer... 125 0.00020 2
CGD|CAL0000702 - symbol:orf19.90 species:5476 "Candida al... 110 0.00043 2
UNIPROTKB|Q59XR6 - symbol:CaO19.90 "Potential GRAM domain... 110 0.00043 2
>TAIR|locus:2097578 [details] [associations]
symbol:AT3G59660 "AT3G59660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0031348 "negative regulation of defense response"
evidence=RCA] [GO:0045087 "innate immune response" evidence=RCA]
InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
Pfam:PF02893 EMBL:CP002686 InterPro:IPR018029 SUPFAM:SSF49562
PROSITE:PS50004 HSSP:P05696 InterPro:IPR004182 SMART:SM00568
EMBL:AY062641 EMBL:BT008357 IPI:IPI00540591 RefSeq:NP_191525.2
UniGene:At.27280 ProteinModelPortal:Q8W4D4 SMR:Q8W4D4 STRING:Q8W4D4
PaxDb:Q8W4D4 PRIDE:Q8W4D4 EnsemblPlants:AT3G59660.1 GeneID:825135
KEGG:ath:AT3G59660 TAIR:At3g59660 eggNOG:NOG251786
HOGENOM:HOG000070984 InParanoid:Q8W4D4 OMA:DGRVRYK PhylomeDB:Q8W4D4
ProtClustDB:CLSN2690615 Genevestigator:Q8W4D4 Uniprot:Q8W4D4
Length = 594
Score = 1455 (517.2 bits), Expect = 4.8e-149, P = 4.8e-149
Identities = 267/377 (70%), Positives = 304/377 (80%)
Query: 14 SLDKQGPTVVHQKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNV 73
+LD+QGPT+VHQKPGPLQTIF+LLPDE+VEHSYSCALERSFLYHGRMYVSAWHICFHSNV
Sbjct: 215 TLDQQGPTIVHQKPGPLQTIFDLLPDEVVEHSYSCALERSFLYHGRMYVSAWHICFHSNV 274
Query: 74 FSKQMKVIIPIGDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFW 133
FSKQMKV++P+GDIDEIRRSQHA INPAITIILRMGAGGHGVPPLG+PDGRVRYKFASFW
Sbjct: 275 FSKQMKVVVPLGDIDEIRRSQHALINPAITIILRMGAGGHGVPPLGTPDGRVRYKFASFW 334
Query: 134 NRNHALRQLQRIAKNYHXXXXXXXXXXXXXXXXXHSSSIRGSRR-QAKIAEETVTKPEKL 192
NRNH L+ LQR NYH HSSS++G + Q K E+T P K
Sbjct: 335 NRNHTLKALQRAVNNYHAMLEVEKKERAQSALRAHSSSVKGGGKVQVKAPEDTAAVPVKF 394
Query: 193 QPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYD 252
Q FIKEEVLV IYNDVF T EQ +L +DDST+TNEYR+ARKD NL + WH A+EYD
Sbjct: 395 QAFIKEEVLVNIYNDVFASTPEQVLNVLLADDSTYTNEYRSARKDKNLNIEPWHTAEEYD 454
Query: 253 GQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCR 312
GQVREI FRS+CNSPMCPPDTA+TE+QH VLSPDKK+ VFETVQQ HDVPFGSYFE+HCR
Sbjct: 455 GQVREIKFRSICNSPMCPPDTAVTEWQHVVLSPDKKVLVFETVQQPHDVPFGSYFEVHCR 514
Query: 313 WHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETARSYIKTRTSG 372
W LE E SS IDI+VG HFKKWC+MQSKIK GA++EYKKEVE+MLE A SY+K+ +S
Sbjct: 515 WRLEAKDETSSVIDIRVGVHFKKWCLMQSKIKAGAIDEYKKEVEVMLEVALSYLKSHSSS 574
Query: 373 GETNN--QSSTPSVTPD 387
+ +S+ S TP+
Sbjct: 575 SSHGDIDKSALSSPTPE 591
>DICTYBASE|DDB_G0267942 [details] [associations]
symbol:DDB_G0267942 "GRAM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0267942 Pfam:PF02893 EMBL:AAFI02000003
InterPro:IPR004182 SMART:SM00568 eggNOG:NOG304071
RefSeq:XP_647436.1 EnsemblProtists:DDB0302579 GeneID:8616243
KEGG:ddi:DDB_G0267942 OMA:TGETHED ProtClustDB:CLSZ2846950
Uniprot:Q55FU7
Length = 898
Score = 195 (73.7 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 47/183 (25%), Positives = 90/183 (49%)
Query: 183 EETVTKPEKLQPFIKEEV--LVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNL 240
E+ ++K ++ Q ++ + I +D F + F+ L+SD F + Y R D N+
Sbjct: 474 EQYLSKDQQPQSILESQSSDFQEILSDNFNVSVVNFYRALYSDRCNFVHSYHVKRGDMNV 533
Query: 241 VMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHD 300
+ W + + G +RE+ + + +SP+ P T + E Q L+ K I +T+ D
Sbjct: 534 NVKPWTFRERF-GTIREVEYVAPVSSPIGPDKTRIQETQRYQLTRKKLIVETDTIML--D 590
Query: 301 VPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLE 360
+P+G +F I +W + S+++ + I + F K +SKI+T V E K + ++
Sbjct: 591 IPYGDHFRIEAKWEVTETSQDTCRLSISLTVRFVKKTWFKSKIETTTVKETKTSFDKWVQ 650
Query: 361 TAR 363
A+
Sbjct: 651 LAK 653
Score = 135 (52.6 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 26 KPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIG 85
K P F L E++ H YS AL R L HGR+Y+ HICF S +F + +IPI
Sbjct: 149 KSEPFTKKFKLPSTEILLHDYSAALFRQILLHGRIYLFTNHICFESKIFGIKTSEVIPIK 208
Query: 86 DIDEIRR 92
D+ +I++
Sbjct: 209 DVIQIKK 215
Score = 45 (20.9 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 125 VRYKFASFWNRNHALRQLQRIAKN 148
V+Y FASF +R+ + L + K+
Sbjct: 231 VKYSFASFVSRDKTYKDLLEVWKD 254
>RGD|1305443 [details] [associations]
symbol:Gramd1b "GRAM domain containing 1B" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF02893 RGD:1305443
InterPro:IPR004182 SMART:SM00568 IPI:IPI00948253
Ensembl:ENSRNOT00000064398 UCSC:RGD:1305443 ArrayExpress:F1LZQ7
Uniprot:F1LZQ7
Length = 733
Score = 150 (57.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 48/211 (22%), Positives = 99/211 (46%)
Query: 180 KIAEETVTKPE-KLQPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT 238
++++ + T E ++Q F ++ N+VF + ++ + LLF+ S F ++ R+ +
Sbjct: 346 ELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTT-SPFLRDFMEQRRFS 404
Query: 239 NLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV-LSPDKKIFVFETVQQ 297
+++ W +E Q R I + +P+ P + E Q S + + +V +
Sbjct: 405 DIIFHPWKK-EENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVL 463
Query: 298 AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKK--WCVMQSKIKTG---AVNEYK 352
HDVP+ YF R+ L ++ N S + + ++K W +++ I+ + +Y
Sbjct: 464 THDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYF 523
Query: 353 KEVELML-ETARSYIKT--RTSGGETNNQSS 380
+ +E L +T +Y+ R S E N+SS
Sbjct: 524 RHLETELTKTESTYLAEIHRQSPKEKTNKSS 554
Score = 123 (48.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F LPD E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 84 PTY-KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWET 142
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ + + DI + + + A + P AI +
Sbjct: 143 LLTVRLKDICSMTKEKTARLIPNAIQV 169
>TAIR|locus:2205625 [details] [associations]
symbol:VAD1 "VASCULAR ASSOCIATED DEATH1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0042742 "defense response to bacterium" evidence=IMP]
[GO:0043069 "negative regulation of programmed cell death"
evidence=IMP] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
Pfam:PF02893 GO:GO:0005783 EMBL:CP002684 GO:GO:0042742
GO:GO:0043069 InterPro:IPR004182 SMART:SM00568 IPI:IPI00516837
RefSeq:NP_171714.2 UniGene:At.24116 UniGene:At.70443 PRIDE:F4HVW5
EnsemblPlants:AT1G02120.1 GeneID:839232 KEGG:ath:AT1G02120
OMA:ECREAYA ArrayExpress:F4HVW5 Uniprot:F4HVW5
Length = 598
Score = 151 (58.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 16 DKQGPTVVHQKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFS 75
D Q + K + +F L DE++ ++CA + S L G MY+ +ICF+SN+F
Sbjct: 60 DNQSEVI--SKSEEYRQLFRLPADEILVQDFNCACQESILMQGHMYLFIHYICFYSNIFG 117
Query: 76 KQMKVIIPIGDIDEIRRSQHAFINP-AITIILRMGAGGHGVPPLGSPDGRVRYKFASFWN 134
+ K IIP +I ++R++ A I P AI I+ AGG +Y FASF +
Sbjct: 118 YETKKIIPFAEISCVKRAKTAGIFPNAIEIL----AGGK------------KYFFASFLS 161
Query: 135 RNHALR 140
R+ A +
Sbjct: 162 RDEAFK 167
Score = 117 (46.2 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 45/204 (22%), Positives = 77/204 (37%)
Query: 181 IAEETVT-KPEKLQ-PFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDS-TFTNEYRAARKD 237
+A T KPE P + + + F E+FF L FSD + +F + D
Sbjct: 252 VAANTFNWKPEDTDAPKLSSD-FTKVAEAKFSIPVEEFFRLFFSDGAVSFVESFHKNCGD 310
Query: 238 TNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQ 297
W ++ G R ++F+ E Q + + + V ET Q+
Sbjct: 311 KEFRCTSWQPHEKL-GHTRNVSFQHPIKIYFGAKFGGCQESQKFRMYRNSHL-VIETSQE 368
Query: 298 AHDVPFGSYFEIHCRWHLETISENS---STIDIKVGAHFKKWCVMQSKIKTGAVNEYKKE 354
DVP+ YF + W L+ +S +D+ V F K V + KI + E ++
Sbjct: 369 ISDVPYADYFTVEGVWDLKRDCRDSVEGCILDVYVNVAFSKRTVWKGKIVQSTLEECREA 428
Query: 355 VELMLETARSYIKTRTSGGETNNQ 378
+ A +K + + N+
Sbjct: 429 YAHWIRMAHELLKQKKLENQEGNK 452
>UNIPROTKB|Q3KR37 [details] [associations]
symbol:GRAMD1B "GRAM domain-containing protein 1B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF02893 GO:GO:0016021 InterPro:IPR004182
SMART:SM00568 eggNOG:NOG304071 HOVERGEN:HBG062004
HOGENOM:HOG000294164 EMBL:AB033027 EMBL:AY358924 EMBL:BC105741
EMBL:BC105932 EMBL:BC105931 EMBL:BC107480 IPI:IPI00432073
IPI:IPI00845280 IPI:IPI00939399 RefSeq:NP_065767.1
UniGene:Hs.144725 UniGene:Hs.732509 ProteinModelPortal:Q3KR37
STRING:Q3KR37 PhosphoSite:Q3KR37 DMDM:121942617 PRIDE:Q3KR37
Ensembl:ENST00000450171 Ensembl:ENST00000529432
Ensembl:ENST00000529750 GeneID:57476 KEGG:hsa:57476 UCSC:uc001pyx.2
UCSC:uc001pyy.2 CTD:57476 GeneCards:GC11P123396 HGNC:HGNC:29214
HPA:HPA008557 neXtProt:NX_Q3KR37 PharmGKB:PA142671708
InParanoid:Q3KR37 GenomeRNAi:57476 NextBio:63719
ArrayExpress:Q3KR37 Bgee:Q3KR37 CleanEx:HS_GRAMD1B
Genevestigator:Q3KR37 Uniprot:Q3KR37
Length = 738
Score = 145 (56.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 46/212 (21%), Positives = 102/212 (48%)
Query: 180 KIAEETVTKPE-KLQPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT 238
++++ + T E ++Q F ++ N+VF + ++ + LLF++ S F ++ R+ +
Sbjct: 351 ELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTN-SPFQRDFMEQRRFS 409
Query: 239 NLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV-LSPDKKIFVFETVQQ 297
+++ W +E Q R I + +P+ P + E Q S + + +V +
Sbjct: 410 DIIFHPWKK-EENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVL 468
Query: 298 AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKK--WCVMQSKIKTG---AVNEYK 352
HDVP+ YF R+ L ++ N S + + ++K W ++++ I+ + +Y
Sbjct: 469 THDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYF 528
Query: 353 KEVELML-ETARSYIKT--RTSGGETNNQSST 381
+ +E L +T +Y+ R S E ++++T
Sbjct: 529 RHLESELAKTESTYLAEMHRQSPKEKASKTTT 560
Score = 123 (48.4 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F LPD E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 89 PTY-KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWET 147
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ + + DI + + + A + P AI +
Sbjct: 148 LLTVRLKDICSMTKEKTARLIPNAIQV 174
>MGI|MGI:1925037 [details] [associations]
symbol:Gramd1b "GRAM domain containing 1B" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:1925037 Pfam:PF02893 GO:GO:0016021 InterPro:IPR004182
SMART:SM00568 GeneTree:ENSGT00580000081380 eggNOG:NOG304071
HOVERGEN:HBG062004 HOGENOM:HOG000294164 CTD:57476 EMBL:AK122465
EMBL:AK020827 EMBL:AK033156 EMBL:BC070451 IPI:IPI00227757
IPI:IPI00845535 IPI:IPI00845682 IPI:IPI00845844 RefSeq:NP_766356.1
UniGene:Mm.138434 ProteinModelPortal:Q80TI0 PhosphoSite:Q80TI0
PaxDb:Q80TI0 PRIDE:Q80TI0 Ensembl:ENSMUST00000045682
Ensembl:ENSMUST00000118159 Ensembl:ENSMUST00000121357
Ensembl:ENSMUST00000165104 GeneID:235283 KEGG:mmu:235283
UCSC:uc009ozn.1 UCSC:uc009ozo.1 UCSC:uc009ozp.1 OMA:EVITHDV
NextBio:382563 Bgee:Q80TI0 CleanEx:MM_GRAMD1B Genevestigator:Q80TI0
Uniprot:Q80TI0
Length = 738
Score = 145 (56.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 47/211 (22%), Positives = 100/211 (47%)
Query: 180 KIAEETVTKPE-KLQPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT 238
++++ + T E ++Q F ++ N+VF + ++ + LLF++ S F ++ R+ +
Sbjct: 351 ELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTN-SPFLRDFMEQRRFS 409
Query: 239 NLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV-LSPDKKIFVFETVQQ 297
+++ W +E Q R I + +P+ P + E Q S + + +V +
Sbjct: 410 DIIFHPWKK-EENGNQSRVILYTITLTNPLAPKTATVRETQTMYKASQESECYVIDAEVL 468
Query: 298 AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKK--WCVMQSKIKTG---AVNEYK 352
HDVP+ YF R+ L ++ N S + + ++K W +++ I+ + +Y
Sbjct: 469 THDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGFVKTFIEKNFWSGLEDYF 528
Query: 353 KEVELML-ETARSYIKT--RTSGGETNNQSS 380
+ +E L +T +Y+ R S E ++SS
Sbjct: 529 RHLETELTKTESTYLAEIHRQSPKEKASKSS 559
Score = 123 (48.4 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F LPD E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 89 PTY-KQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWET 147
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ + + DI + + + A + P AI +
Sbjct: 148 LLTVRLKDICSMTKEKTARLIPNAIQV 174
>UNIPROTKB|Q8IYS0 [details] [associations]
symbol:GRAMD1C "GRAM domain-containing protein 1C"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF02893 GO:GO:0016021 EMBL:CH471052
InterPro:IPR004182 SMART:SM00568 eggNOG:NOG304071
HOVERGEN:HBG062004 HOGENOM:HOG000294164 EMBL:AK292846 EMBL:BC028972
EMBL:BC035040 EMBL:AL133661 EMBL:BX648633 EMBL:AY358725
IPI:IPI00217850 IPI:IPI00946143 PIR:T43471 RefSeq:NP_001165576.1
RefSeq:NP_060047.3 UniGene:Hs.24583 ProteinModelPortal:Q8IYS0
PhosphoSite:Q8IYS0 DMDM:147645434 PaxDb:Q8IYS0 PRIDE:Q8IYS0
DNASU:54762 Ensembl:ENST00000358160 Ensembl:ENST00000440446
GeneID:54762 KEGG:hsa:54762 UCSC:uc003eaq.4 CTD:54762
GeneCards:GC03P113547 HGNC:HGNC:25252 HPA:HPA012316
neXtProt:NX_Q8IYS0 PharmGKB:PA142671709 InParanoid:Q8IYS0
OMA:SLIMLQK OrthoDB:EOG4D7Z5R PhylomeDB:Q8IYS0 ChiTaRS:GRAMD1C
GenomeRNAi:54762 NextBio:57397 ArrayExpress:Q8IYS0 Bgee:Q8IYS0
CleanEx:HS_GRAMD1C Genevestigator:Q8IYS0 Uniprot:Q8IYS0
Length = 662
Score = 145 (56.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 44/164 (26%), Positives = 85/164 (51%)
Query: 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDG-QVREITFRSLC 264
N +F +A++ F LLF+ S F ++ ++R ++V W A E G Q+R +T+ +
Sbjct: 332 NRIFHISADRMFELLFTS-SRFMQKFASSRNIIDVVSTPWTA--ELGGDQLRTMTYTIVL 388
Query: 265 NSPMCPPDTAMTEYQHAVL-SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSS 323
NSP+ TA TE Q S + + ++ ++ HDVP+ YF R+ + S+
Sbjct: 389 NSPLTGKCTAATEKQTLYKESREARFYLVDSEVLTHDVPYHDYFYTVNRYCIIRSSKQKC 448
Query: 324 TIDIKVGAHFKK--WCVMQSKIKTGA---VNEYKKEVE--LMLE 360
+ + ++K W +++S I+ + + +Y K++E L++E
Sbjct: 449 RLRVSTDLKYRKQPWGLVKSLIEKNSWSSLEDYFKQLESDLLIE 492
Score = 115 (45.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 34 FNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRR 92
F LPD E + Y+CAL+R L GR+Y+S +CF+SN+F + + I + +I + +
Sbjct: 75 FTHLPDTERLIADYACALQRDILLQGRLYLSENWLCFYSNIFRWETTISIALKNITFMTK 134
Query: 93 SQHAFINP-AITII 105
+ A + P AI I+
Sbjct: 135 EKTARLIPNAIQIV 148
>WB|WBGene00022593 [details] [associations]
symbol:ZC328.3 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
Pfam:PF02893 GO:GO:0009792 InterPro:IPR004182 SMART:SM00568
GeneTree:ENSGT00580000081380 EMBL:FO081681 RefSeq:NP_001040716.1
UniGene:Cel.5224 ProteinModelPortal:H2L0J6 EnsemblMetazoa:ZC328.3a
GeneID:172343 KEGG:cel:CELE_ZC328.3 CTD:172343 WormBase:ZC328.3a
OMA:WETTLVI Uniprot:H2L0J6
Length = 616
Score = 134 (52.2 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 45 SYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITI 104
SYSCA +R L GRM++S +++CF++N+ + ++IP+ +I +++ + AFI P
Sbjct: 95 SYSCAYQREILAQGRMFISQFNVCFYANIIGWETTLVIPMKEISLVKKMKAAFIFPNSIQ 154
Query: 105 ILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHALRQL 142
I R D + +Y FASF NR+ + + L
Sbjct: 155 IER--------------DTKEKYFFASFINRDKSYQVL 178
Score = 123 (48.4 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 40/166 (24%), Positives = 69/166 (41%)
Query: 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFR-S 262
I + F + E+F+ LLF+D+ F K V W D R T+ S
Sbjct: 306 IMDKEFKVSVEKFYELLFTDNE-FLTMLNQKTKTAEYVAATW-VRDHQGDNTRTCTYTVS 363
Query: 263 LCNSPMCPPDTAMTEYQHAVLSPD-KKIFVFETVQQAHDVPFGSYFEIHCRWHLETISEN 321
L ++ M P + E Q P+ K+ + + Q VP+ F ++CR+ +
Sbjct: 364 LAHA-MAPKAIIVNEKQILTHYPNPKQGIMMQKETQNSGVPYSDNFTVNCRYCISRTGPT 422
Query: 322 SSTIDIKVGAHFKK--WCVMQSKIKTGAVNEYKKEVELMLETARSY 365
S I + G +KK W V+++ I+ G + +L+ + Y
Sbjct: 423 SCRIKVHGGVMYKKSTWAVVKTFIEKGTHQGLDEHYQLLSKLVDEY 468
>POMBASE|SPBC20F10.07 [details] [associations]
symbol:SPBC20F10.07 "GRAM domain protein" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISM] [GO:0016021 "integral to membrane" evidence=IEA]
PomBase:SPBC20F10.07 Pfam:PF02893 GO:GO:0016021 GO:GO:0005737
GO:GO:0016020 EMBL:CU329671 InterPro:IPR004182 SMART:SM00568
eggNOG:NOG304071 OrthoDB:EOG42FWSS EMBL:AB027914 PIR:T39878
RefSeq:NP_596371.1 EnsemblFungi:SPBC20F10.07.1 GeneID:2540703
KEGG:spo:SPBC20F10.07 OMA:NTDEANE NextBio:20801826 Uniprot:O42976
Length = 764
Score = 156 (60.0 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 41/120 (34%), Positives = 61/120 (50%)
Query: 33 IFNLLP--DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEI 90
IF +LP D L++ Y CAL+R HGRMY+S HICF+S++F ++IP+ +I +
Sbjct: 202 IFKVLPPEDHLID-DYGCALQRDIFLHGRMYLSESHICFNSSIFGWVTNIVIPVTEIVSV 260
Query: 91 RRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHALRQLQRIAKNYH 150
+ A + P I + A RY FASF +R+ + + I KN H
Sbjct: 261 EKKSTAVVFPNAIQITTLHA---------------RYIFASFISRDTTYQLIIAIWKNTH 305
Score = 90 (36.7 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 38/166 (22%), Positives = 72/166 (43%)
Query: 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADE-YDGQVREITFRSLC 264
+DV + F LL D+T+ + + K T + +G+W D+ ++ +V+ I
Sbjct: 438 SDVVNLSVSTVFNLLCGSDTTWIINFFKSEKLTEIKIGKWEKIDDKWNRKVQYI------ 491
Query: 265 NSPMCPP--DTA--MTE-YQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETIS 319
P+ PP T+ +T+ QH L + I + T DVP G+ F + + L
Sbjct: 492 -KPVAPPYRQTSCYITDTIQH--LDINNYIEILSTTSTP-DVPSGTSFVVKTLYALSWAH 547
Query: 320 ENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETARSY 365
+ + ++I + K ++ I+ GA V+ +L +Y
Sbjct: 548 SSKTKLNISYSVEWSKSSWLKGPIEKGAQEGQASYVKDLLTAFENY 593
>MGI|MGI:105490 [details] [associations]
symbol:Gramd1a "GRAM domain containing 1A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:105490 Pfam:PF02893
GO:GO:0016021 InterPro:IPR004182 SMART:SM00568
GeneTree:ENSGT00580000081380 CTD:57655 eggNOG:NOG304071
HOVERGEN:HBG062004 OrthoDB:EOG4255SS ChiTaRS:GRAMD1A EMBL:AK083837
EMBL:AK150032 EMBL:AK150196 EMBL:AK150837 EMBL:AK151987
EMBL:AK152294 EMBL:AK154821 EMBL:BC018554 EMBL:AK173194
IPI:IPI00124534 IPI:IPI00761341 IPI:IPI00845779 RefSeq:NP_082174.3
UniGene:Mm.27366 ProteinModelPortal:Q8VEF1 IntAct:Q8VEF1
PhosphoSite:Q8VEF1 PRIDE:Q8VEF1 Ensembl:ENSMUST00000001280
GeneID:52857 KEGG:mmu:52857 UCSC:uc009gif.1 HOGENOM:HOG000294164
InParanoid:Q8VEF1 OMA:HQGITVS NextBio:309647 Bgee:Q8VEF1
CleanEx:MM_GRAMD1A Genevestigator:Q8VEF1 Uniprot:Q8VEF1
Length = 722
Score = 122 (48.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F+ LP+ E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 86 PTY-KQRNEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWET 144
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ I + ++ +++ + A + P AI I
Sbjct: 145 TISIQLKEVTCLKKEKTAKLIPNAIQI 171
Score = 105 (42.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 38/178 (21%), Positives = 78/178 (43%)
Query: 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSL 263
+ N VF AE+ +LFSD S F + RK T++ + W ++D Q R +T+
Sbjct: 373 LINSVFHMGAERLQQMLFSD-SPFLQGFLQQRKFTDVTLSPW-SSDSKCHQRRVLTYTIP 430
Query: 264 CNSPMCPPDTAMTEYQHAVL-SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENS 322
++ + P ++ E Q P V ++ +P+ YF R+ + ++ N
Sbjct: 431 ISNQLGPKSASVVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNK 490
Query: 323 STIDIKVGAHFKK--WCVMQSKIKTGA---VNEYKKEVELMLETARSYIKTRTSGGET 375
+ + + ++K W +++S I+ + + +Y ++ L A + G +T
Sbjct: 491 ARLRVSSEIRYRKQPWSLVKSLIEKNSWSGIEDYFHHLDRELAKAEK-LSLEEGGKDT 547
>UNIPROTKB|Q96CP6 [details] [associations]
symbol:GRAMD1A "GRAM domain-containing protein 1A"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF02893 GO:GO:0016021 InterPro:IPR004182
SMART:SM00568 EMBL:AC020907 EMBL:AK074914 EMBL:BC014077
EMBL:AB040966 IPI:IPI00168347 IPI:IPI00180434 IPI:IPI00845289
RefSeq:NP_001129671.1 RefSeq:NP_065946.2 UniGene:Hs.515351
ProteinModelPortal:Q96CP6 IntAct:Q96CP6 PhosphoSite:Q96CP6
DMDM:121944494 PaxDb:Q96CP6 PRIDE:Q96CP6 DNASU:57655
Ensembl:ENST00000317991 Ensembl:ENST00000411896 GeneID:57655
KEGG:hsa:57655 UCSC:uc002nxk.2 UCSC:uc010xse.1 UCSC:uc010xsf.1
CTD:57655 GeneCards:GC19P035533 HGNC:HGNC:29305 HPA:HPA008852
HPA:HPA012570 neXtProt:NX_Q96CP6 PharmGKB:PA134869487
eggNOG:NOG304071 HOVERGEN:HBG062004 InParanoid:Q96CP6
OrthoDB:EOG4255SS ChiTaRS:GRAMD1A GenomeRNAi:57655 NextBio:64409
ArrayExpress:Q96CP6 Bgee:Q96CP6 CleanEx:HS_GRAMD1A
Genevestigator:Q96CP6 Uniprot:Q96CP6
Length = 724
Score = 122 (48.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F+ LP+ E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 84 PTY-KQRNEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWET 142
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ I + ++ +++ + A + P AI I
Sbjct: 143 TISIQLKEVTCLKKEKTAKLIPNAIQI 169
Score = 105 (42.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/165 (22%), Positives = 73/165 (44%)
Query: 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSL 263
+ N VF AE+ +LFSD S F + K T++ + W + D Q R +T+
Sbjct: 371 LINSVFHVGAERLQQMLFSD-SPFLQGFLQQCKFTDVTLSPW-SGDSKCHQRRVLTYTIP 428
Query: 264 CNSPMCPPDTAMTEYQHAVL-SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENS 322
++P+ P ++ E Q P V ++ +P+ YF R+ + ++ N
Sbjct: 429 ISNPLGPKSASVVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNK 488
Query: 323 STIDIKVGAHFKK--WCVMQSKIKTGA---VNEYKKEVELMLETA 362
+ + + ++K W +++S I+ + + +Y +E L A
Sbjct: 489 ARLRVSSEIRYRKQPWSLVKSLIEKNSWSGIEDYFHHLERELAKA 533
>SGD|S000002734 [details] [associations]
symbol:YSP2 "Protein involved in programmed cell death"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA;IMP] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
SGD:S000002734 Pfam:PF02893 GO:GO:0016021 GO:GO:0005739
GO:GO:0006915 GO:GO:0031966 EMBL:BK006938 InterPro:IPR004182
SMART:SM00568 EMBL:U32517 GeneTree:ENSGT00580000081380
eggNOG:NOG304071 OrthoDB:EOG42FWSS HOGENOM:HOG000001060 PIR:S59792
RefSeq:NP_010613.1 ProteinModelPortal:Q06681 DIP:DIP-1840N
IntAct:Q06681 MINT:MINT-392107 STRING:Q06681 PaxDb:Q06681
PeptideAtlas:Q06681 EnsemblFungi:YDR326C GeneID:851926
KEGG:sce:YDR326C CYGD:YDR326c OMA:VFIPFKE NextBio:969980
Genevestigator:Q06681 GermOnline:YDR326C Uniprot:Q06681
Length = 1438
Score = 118 (46.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 37/178 (20%), Positives = 82/178 (46%)
Query: 217 FTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTA-- 274
F+LL+ DD+++ + + + N+ ++ REIT+ N+ P T
Sbjct: 1077 FSLLYGDDTSYIKKIIENQNNFNVC-----DIPKFVNNAREITYTKKLNNSFGPKQTKCI 1131
Query: 275 MTE-YQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHF 333
+TE +H L+ F+ + + ++ DVP+GS F +H R+ N++ + + +
Sbjct: 1132 VTETIEHMDLN---SFFMVKQIVRSPDVPYGSSFSVHTRFFYSWGDHNTTNMKVVTNVVW 1188
Query: 334 KKWCVMQSKIKTGAVNEYKKEVELMLETARSYI--------KTRTSGGETNNQSSTPS 383
+++ I+ G+++ + + +++ + I K+R G N + S+PS
Sbjct: 1189 TGKSMLKGTIEKGSIDGQRSSTKQLVDDLKKIISNASSTKKKSRRRGKTVNKRKSSPS 1246
Score = 115 (45.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 25 QKPGPLQTIF---NLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVI 81
+K T+F ++ P+E + +SCAL R L GRMY+S HI F SN+ V
Sbjct: 644 KKNSEFHTLFKDCDINPNEKLIVDHSCALSRDILLQGRMYISDAHIGFFSNILGWVSTVF 703
Query: 82 IPIGDIDEIRRSQHAFINP 100
IP +I +I + A I P
Sbjct: 704 IPFKEIVQIEKKTTAGIFP 722
>RGD|1311022 [details] [associations]
symbol:Gramd1a "GRAM domain containing 1A" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF02893 RGD:1311022 GO:GO:0016021 InterPro:IPR004182
SMART:SM00568 GeneTree:ENSGT00580000081380 CTD:57655
eggNOG:NOG304071 HOVERGEN:HBG062004 OrthoDB:EOG4255SS
HOGENOM:HOG000294164 OMA:HQGITVS EMBL:BC105896 EMBL:AY171575
IPI:IPI00365708 RefSeq:NP_001014182.1 UniGene:Rn.16801
Ensembl:ENSRNOT00000028660 GeneID:361550 KEGG:rno:361550
UCSC:RGD:1311022 InParanoid:Q3KR56 NextBio:676694
ArrayExpress:Q3KR56 Genevestigator:Q3KR56 Uniprot:Q3KR56
Length = 723
Score = 122 (48.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 20 PTVVHQKPGPLQTIFNLLPD-ELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQM 78
PT Q+ + +F+ LP+ E + YSCAL+R L GR+Y+S ICF+SN+F +
Sbjct: 86 PTY-KQRNEDFRKLFSKLPEAERLIVDYSCALQREILLQGRLYLSENWICFYSNIFRWET 144
Query: 79 KVIIPIGDIDEIRRSQHAFINP-AITI 104
+ I + ++ +++ + A + P AI I
Sbjct: 145 TISIQLKEVTCLKKEKTAKLIPNAIQI 171
Score = 103 (41.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 33/144 (22%), Positives = 66/144 (45%)
Query: 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSL 263
+ N VF AE+ +LFSD S F + RK T++ + W ++D Q R +T+
Sbjct: 374 LINSVFHVGAERLQQMLFSD-SPFLQGFLQQRKFTDVTLSPW-SSDSKCHQRRVLTYTIP 431
Query: 264 CNSPMCPPDTAMTEYQHAVL-SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENS 322
++ + P ++ E Q P V ++ +P+ YF R+ + ++ N
Sbjct: 432 ISNQLGPKSASVVETQTLFRRGPQAGGCVVDSEVLTQGIPYQDYFYTAHRYCILGLARNK 491
Query: 323 STIDIKVGAHFKK--WCVMQSKIK 344
+ + + ++K W +++S I+
Sbjct: 492 ARLRVSSEIRYRKQPWSLVKSLIE 515
>UNIPROTKB|Q69V64 [details] [associations]
symbol:P0556B08.10 "C2 domain-containing protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0010152 "pollen
maturation" evidence=IMP] Pfam:PF02893 GO:GO:0010152
InterPro:IPR004182 SMART:SM00568 EMBL:AP004279 Gramene:Q69V64
Uniprot:Q69V64
Length = 354
Score = 162 (62.1 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/128 (33%), Positives = 66/128 (51%)
Query: 25 QKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPI 84
Q + +FNL P+E + ++C L+R GR++ S I F+SN+F + K
Sbjct: 21 QTNAAFRKLFNLPPEEFLIDDFTCHLKRKMPLQGRLFFSPRIIGFYSNIFGHKTKFFFLW 80
Query: 85 GDIDEIRRSQHAFI--NPAITIILRMGAG---GHGVPPLGSPDGRVRYKFASFWNRNHAL 139
D+D+I+ +P++TIILR G G HG P+GR++Y F SF + N A
Sbjct: 81 DDVDDIQVIPPTLSIGSPSLTIILRKGRGLEAKHGAKGT-DPNGRLKYYFQSFVSFNDAH 139
Query: 140 RQLQRIAK 147
R + I K
Sbjct: 140 RIIMAIWK 147
>TAIR|locus:2157707 [details] [associations]
symbol:AT5G50170 "AT5G50170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000008
InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 Pfam:PF02893
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 HSSP:P21707
InterPro:IPR004182 SMART:SM00568 EMBL:AB024031 EMBL:AY056116
EMBL:BT009696 IPI:IPI00531054 RefSeq:NP_199828.1 UniGene:At.26376
ProteinModelPortal:Q9FGS8 SMR:Q9FGS8 PaxDb:Q9FGS8 PRIDE:Q9FGS8
EnsemblPlants:AT5G50170.1 GeneID:835082 KEGG:ath:AT5G50170
TAIR:At5g50170 eggNOG:NOG318506 HOGENOM:HOG000029734
InParanoid:Q9FGS8 OMA:DVEVFDF PhylomeDB:Q9FGS8
ProtClustDB:CLSN2687018 Genevestigator:Q9FGS8 Uniprot:Q9FGS8
Length = 1027
Score = 132 (51.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 25 QKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPI 84
QK Q +F L +E + Y+C L+R G++++SA + F+SNVF + K
Sbjct: 689 QKNSAFQKLFGLPHEEFLLKEYTCYLKRKLPVQGKLFLSARIVAFYSNVFGHKTKFYFLW 748
Query: 85 GDIDEIRRSQHAFIN---PAITIILRMGAG---GHGVPPLGSPDGRVRYKFASFWNRNHA 138
DID+I+ F + P + IIL+ G HG +GR+ + F SF + +
Sbjct: 749 EDIDDIQVLPPTFASLGSPLLLIILKKNRGLDAKHGAKSQDD-EGRLSFYFQSFVSFDAT 807
Query: 139 LRQLQRIAK 147
R + + K
Sbjct: 808 SRTIMALWK 816
Score = 78 (32.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 13/79 (16%), Positives = 40/79 (50%)
Query: 284 SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLET--ISENSSTIDIKVGAHFKKWCVMQS 341
+P+ + ++ + HDVPFG +F +H R+ ++ + +S ++ + + K +
Sbjct: 934 APNDEGWILNEIVALHDVPFGDHFRVHIRYEVKKAGVDCKTSKCEVYLKIRWLKTIKFEQ 993
Query: 342 KIKTGAVNEYKKEVELMLE 360
+I + +++ +++ +
Sbjct: 994 RISKSIMEKFRNRFKVIFD 1012
>UNIPROTKB|Q66VB0 [details] [associations]
symbol:Os06g0607900 "Os06g0607900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0010152 "pollen maturation"
evidence=IMP] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
SMART:SM00239 Pfam:PF02893 EMBL:AP008212 GO:GO:0010152
InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
InterPro:IPR004182 SMART:SM00568 HOGENOM:HOG000029734 EMBL:AY702084
RefSeq:NP_001174893.1 UniGene:Os.25203
EnsemblPlants:LOC_Os06g40570.1 GeneID:9269603 KEGG:osa:9269603
OMA:MSEIFSS Uniprot:Q66VB0
Length = 1086
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 43/128 (33%), Positives = 66/128 (51%)
Query: 25 QKPGPLQTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPI 84
Q + +FNL P+E + ++C L+R GR++ S I F+SN+F + K
Sbjct: 753 QTNAAFRKLFNLPPEEFLIDDFTCHLKRKMPLQGRLFFSPRIIGFYSNIFGHKTKFFFLW 812
Query: 85 GDIDEIRRSQHAFI--NPAITIILRMGAG---GHGVPPLGSPDGRVRYKFASFWNRNHAL 139
D+D+I+ +P++TIILR G G HG P+GR++Y F SF + N A
Sbjct: 813 DDVDDIQVIPPTLSIGSPSLTIILRKGRGLEAKHGAKGT-DPNGRLKYYFQSFVSFNDAH 871
Query: 140 RQLQRIAK 147
R + I K
Sbjct: 872 RIIMAIWK 879
>CGD|CAL0001781 [details] [associations]
symbol:orf19.4423 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] CGD:CAL0001781
Pfam:PF02893 GO:GO:0005886 InterPro:IPR004182 SMART:SM00568
EMBL:AACQ01000115 EMBL:AACQ01000111 eggNOG:NOG304071
RefSeq:XP_713869.1 RefSeq:XP_714069.1 GeneID:3644269 GeneID:3644482
KEGG:cal:CaO19.11901 KEGG:cal:CaO19.4423 Uniprot:Q59WE7
Length = 1073
Score = 115 (45.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 34 FNLLP--DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIR 91
F LP ++L++ +SCA+ + L G+MY+S ++CF+SN+ ++IP+ ++ +I
Sbjct: 474 FKKLPTKEKLID-DFSCAVSKDILVQGKMYLSDHYVCFNSNILGWVTNLVIPLQEVIQIE 532
Query: 92 RSQHAFINPAITIILR 107
+ A + P I++R
Sbjct: 533 KKSTAVLFPN-GIVIR 547
Score = 91 (37.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 37/187 (19%), Positives = 71/187 (37%)
Query: 195 FIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT-NLVMGQWHA-ADEYD 252
+ KE I D + ++F D T++Y KD N + + A +
Sbjct: 704 YSKESSETFISEDTIKAPPGAVYLIMFGTD---TSKYIRILKDQKNFDISESKIKALTKE 760
Query: 253 GQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCR 312
+ R T+ + P+ P T + +K + E Q DVP G+ F++ +
Sbjct: 761 NKERSYTYTKPLSGPIGPKQTKCNIEDKLIEYQPEKFYEVEQTTQTPDVPSGNSFKVKTK 820
Query: 313 WHLETISENSSTIDIKVGAHF--KKWCVMQSKIKTGAVNEYKKEVELMLETARSYIKTRT 370
L + N + + + + K W ++ I+ G + K ++ M+ T S + +
Sbjct: 821 IFLSWAANNETKVYVVTSIEWSGKSW--IKGAIEKGTIEGQKDSMKSMISTINSIVSQGS 878
Query: 371 SGGETNN 377
E N
Sbjct: 879 DKKEGAN 885
>UNIPROTKB|Q59WE7 [details] [associations]
symbol:CaO19.11901 "Potential GRAM domain protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] CGD:CAL0001781 Pfam:PF02893 GO:GO:0005886
InterPro:IPR004182 SMART:SM00568 EMBL:AACQ01000115
EMBL:AACQ01000111 eggNOG:NOG304071 RefSeq:XP_713869.1
RefSeq:XP_714069.1 GeneID:3644269 GeneID:3644482
KEGG:cal:CaO19.11901 KEGG:cal:CaO19.4423 Uniprot:Q59WE7
Length = 1073
Score = 115 (45.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 34 FNLLP--DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIR 91
F LP ++L++ +SCA+ + L G+MY+S ++CF+SN+ ++IP+ ++ +I
Sbjct: 474 FKKLPTKEKLID-DFSCAVSKDILVQGKMYLSDHYVCFNSNILGWVTNLVIPLQEVIQIE 532
Query: 92 RSQHAFINPAITIILR 107
+ A + P I++R
Sbjct: 533 KKSTAVLFPN-GIVIR 547
Score = 91 (37.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 37/187 (19%), Positives = 71/187 (37%)
Query: 195 FIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT-NLVMGQWHA-ADEYD 252
+ KE I D + ++F D T++Y KD N + + A +
Sbjct: 704 YSKESSETFISEDTIKAPPGAVYLIMFGTD---TSKYIRILKDQKNFDISESKIKALTKE 760
Query: 253 GQVREITFRSLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCR 312
+ R T+ + P+ P T + +K + E Q DVP G+ F++ +
Sbjct: 761 NKERSYTYTKPLSGPIGPKQTKCNIEDKLIEYQPEKFYEVEQTTQTPDVPSGNSFKVKTK 820
Query: 313 WHLETISENSSTIDIKVGAHF--KKWCVMQSKIKTGAVNEYKKEVELMLETARSYIKTRT 370
L + N + + + + K W ++ I+ G + K ++ M+ T S + +
Sbjct: 821 IFLSWAANNETKVYVVTSIEWSGKSW--IKGAIEKGTIEGQKDSMKSMISTINSIVSQGS 878
Query: 371 SGGETNN 377
E N
Sbjct: 879 DKKEGAN 885
>UNIPROTKB|Q5Z6I4 [details] [associations]
symbol:OSJNBa0055N24.36 "Putative Osnop" species:39947
"Oryza sativa Japonica Group" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] InterPro:IPR000008 InterPro:IPR008973
Pfam:PF00168 SMART:SM00239 Pfam:PF02893 GO:GO:0005634 GO:GO:0005737
EMBL:AP008212 InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004182 SMART:SM00568
eggNOG:NOG245727 EMBL:AP005413 RefSeq:NP_001057439.1
UniGene:Os.20708 STRING:Q5Z6I4 EnsemblPlants:LOC_Os06g19400.1
GeneID:4340810 KEGG:osa:4340810 OMA:HIILASP ProtClustDB:CLSN2696135
Uniprot:Q5Z6I4
Length = 1037
Score = 153 (58.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 75/339 (22%), Positives = 135/339 (39%)
Query: 31 QTIFNLLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEI 90
Q IF+L P+E + + ++C L+R L GR+++S I F++N+F + K DI++I
Sbjct: 712 QKIFSLPPEEFLINDFTCHLKRKMLTQGRLFLSPRIIGFYTNLFGHKTKFFFLWEDIEDI 771
Query: 91 RRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHALRQLQRIAK-NY 149
+ + PA T+ +GSP + + H +QL + +
Sbjct: 772 Q------VMPA-TLY-----------SMGSPSLLIILHKGRGMDARHGAKQLDNEGRLKF 813
Query: 150 HXXXXXXXXXXXXXXXXXHSSSIRGSRRQAKIAEETVTKPEKLQPFIKEEVLVGI----Y 205
H + ++ ++ EE ++ + LQ + L GI
Sbjct: 814 HFQSFVSFNVAHKTIMALWKARSLTPEQKVQLVEEE-SEMKDLQNNESDSFL-GIEDAKM 871
Query: 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKD--TNLVMGQWHA--ADEYDGQVREITFR 261
++VF T + L S E++ K + W + AD Y Q+ +
Sbjct: 872 SEVFSSTKPFDVSTLMSIFEGGPLEHQVMEKIGCMEYSVSPWESVRADAYQRQIHYKFDK 931
Query: 262 SLCNSPMCPPDTAMTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISEN 321
L M+ Q + L PDK ++ E V +P G YF +H R+ LE IS
Sbjct: 932 RLARHE----GEVMSTQQKSPL-PDKNGWLVEEVMTLEGIPVGEYFNLHMRYQLEQISSK 986
Query: 322 --SSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELM 358
+ + + +G + K C + KI ++ ++ M
Sbjct: 987 PKACNVQVSIGIAWLKSCKNRKKIAQEVLSSASSRLKKM 1025
>MGI|MGI:3528937 [details] [associations]
symbol:Gramd2 "GRAM domain containing 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] MGI:MGI:3528937 Pfam:PF02893
GO:GO:0016021 InterPro:IPR004182 SMART:SM00568 CTD:196996
eggNOG:NOG312989 HOGENOM:HOG000060186 HOVERGEN:HBG094966
OMA:KMPNCSP OrthoDB:EOG4FR0SH EMBL:AK040545 EMBL:AK041631
EMBL:BC138948 EMBL:BC138949 IPI:IPI00654198 IPI:IPI00845633
RefSeq:NP_001028670.1 UniGene:Mm.297580 ProteinModelPortal:Q3V3G7
PhosphoSite:Q3V3G7 PRIDE:Q3V3G7 Ensembl:ENSMUST00000098661
Ensembl:ENSMUST00000128944 GeneID:546134 KEGG:mmu:546134
UCSC:uc009pyk.1 UCSC:uc009pyl.1 GeneTree:ENSGT00580000081380
InParanoid:B2RSP5 NextBio:413368 Bgee:Q3V3G7 CleanEx:MM_GRAMD2
Genevestigator:Q3V3G7 Uniprot:Q3V3G7
Length = 320
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 33 IFNLLP-DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIR 91
+F +P +E+V SCAL+R L HGR+Y+S +CFH+++F K +KV+IP+ + I+
Sbjct: 79 LFKDIPLEEVVLKVCSCALQRDLLLHGRLYISPNWLCFHASLFGKDIKVVIPVVSVQLIK 138
Query: 92 RSQHAFINP 100
+ + A + P
Sbjct: 139 KHKMARLLP 147
>UNIPROTKB|Q8IUY3 [details] [associations]
symbol:GRAMD2 "GRAM domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF02893 GO:GO:0016021 EMBL:CH471082
InterPro:IPR004182 SMART:SM00568 EMBL:AK095072 EMBL:DA306775
EMBL:BC038451 IPI:IPI00216915 RefSeq:NP_001012660.1
UniGene:Hs.596332 UniGene:Hs.706272 ProteinModelPortal:Q8IUY3
PhosphoSite:Q8IUY3 DMDM:147644890 PaxDb:Q8IUY3 PRIDE:Q8IUY3
DNASU:196996 Ensembl:ENST00000309731 GeneID:196996 KEGG:hsa:196996
UCSC:uc002atq.3 CTD:196996 GeneCards:GC15M072452 HGNC:HGNC:27287
HPA:HPA029435 neXtProt:NX_Q8IUY3 PharmGKB:PA142671710
eggNOG:NOG312989 HOGENOM:HOG000060186 HOVERGEN:HBG094966
InParanoid:Q8IUY3 OMA:KMPNCSP OrthoDB:EOG4FR0SH PhylomeDB:Q8IUY3
GenomeRNAi:196996 NextBio:89595 ArrayExpress:Q8IUY3 Bgee:Q8IUY3
CleanEx:HS_GRAMD2 Genevestigator:Q8IUY3 Uniprot:Q8IUY3
Length = 354
Score = 141 (54.7 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 33 IFNLLP-DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIR 91
+F +P +E+V SCAL+R FL GR+Y+S +CFH+++F K +KV+IP+ + I+
Sbjct: 77 LFKDVPLEEVVLKVCSCALQRDFLLQGRLYISPNWLCFHASLFGKDIKVVIPVVSVQMIK 136
Query: 92 RSQHAFINP 100
+ + A + P
Sbjct: 137 KHKMARLLP 145
>UNIPROTKB|Q96HH9 [details] [associations]
symbol:GRAMD3 "GRAM domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] Pfam:PF02893 EMBL:AC093535 EMBL:CH471086
InterPro:IPR004182 SMART:SM00568 EMBL:AY116970 EMBL:AK024966
EMBL:AK293307 EMBL:AK296267 EMBL:AK300154 EMBL:AK303857
EMBL:AK316288 EMBL:AC008546 EMBL:BC008590 IPI:IPI00305868
IPI:IPI00922170 IPI:IPI00922305 IPI:IPI00922830
RefSeq:NP_001139791.1 RefSeq:NP_001139792.1 RefSeq:NP_001139793.1
RefSeq:NP_001139794.1 RefSeq:NP_076416.2 UniGene:Hs.363558
ProteinModelPortal:Q96HH9 IntAct:Q96HH9 STRING:Q96HH9
PhosphoSite:Q96HH9 DMDM:74731934 PRIDE:Q96HH9 DNASU:65983
Ensembl:ENST00000285689 Ensembl:ENST00000511134
Ensembl:ENST00000513040 Ensembl:ENST00000542322
Ensembl:ENST00000544396 GeneID:65983 KEGG:hsa:65983 UCSC:uc003ktu.3
CTD:65983 GeneCards:GC05P125788 HGNC:HGNC:24911 HPA:HPA009678
HPA:HPA010095 neXtProt:NX_Q96HH9 PharmGKB:PA142671711
eggNOG:NOG319417 HOGENOM:HOG000082410 HOVERGEN:HBG055715
InParanoid:Q96HH9 PhylomeDB:Q96HH9 BindingDB:Q96HH9
ChEMBL:CHEMBL3339 GenomeRNAi:65983 NextBio:67447
ArrayExpress:Q96HH9 Bgee:Q96HH9 CleanEx:HS_GRAMD3
Genevestigator:Q96HH9 GermOnline:ENSG00000155324 Uniprot:Q96HH9
Length = 432
Score = 141 (54.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 33 IFNLLP-DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIR 91
+F +P +E ++ S++CAL++ LY G+++VS ICFHS VF K K+ IP + I+
Sbjct: 115 LFLSVPTEEPLKQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAFSVTLIK 174
Query: 92 RSQHAFINPAITII 105
+++ A + P II
Sbjct: 175 KTKTALLVPNALII 188
>SGD|S000004062 [details] [associations]
symbol:YLR072W "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0016020 "membrane" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] SGD:S000004062
Pfam:PF02893 GO:GO:0016021 GO:GO:0005737 EMBL:BK006945
GO:GO:0030659 InterPro:IPR004182 SMART:SM00568
GeneTree:ENSGT00580000081380 OrthoDB:EOG42FWSS EMBL:Z73244
PIR:S64904 RefSeq:NP_013173.1 ProteinModelPortal:Q08001
DIP:DIP-1861N IntAct:Q08001 MINT:MINT-409013 STRING:Q08001
PaxDb:Q08001 EnsemblFungi:YLR072W GeneID:850761 KEGG:sce:YLR072W
CYGD:YLR072w eggNOG:NOG327739 NextBio:966912 Genevestigator:Q08001
GermOnline:YLR072W Uniprot:Q08001
Length = 693
Score = 105 (42.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 36 LLPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDI---DEIRR 92
L P+ + Y C R F Y GR+Y+S H+CF+S V + K+ IP+ +I D++
Sbjct: 173 LAPNTRLITDYFCYFHREFPYQGRIYLSNTHLCFNSTVLNWMAKLQIPLNEIKYLDKVTT 232
Query: 93 SQHAFINPAIT 103
+ A +T
Sbjct: 233 NSSAISVETVT 243
Score = 85 (35.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/179 (21%), Positives = 78/179 (43%)
Query: 217 FTLLFSDDS-TFTNEYRAARKDTNLV-MGQWHAADEYDGQ-VREITFRSLCNSPMCPPDT 273
F ++F++D+ F + + +N+ +G + ++ DGQ RE + + P+ P T
Sbjct: 420 FIMMFNEDNPVFELSFLKTQDSSNISHIGTFEKVNK-DGQHYREFQYTKQLHFPVGPKST 478
Query: 274 AMTEYQHAVLSPDKKIFV-FETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGA- 331
E +L D + ++ ++ + +VP G+ F R+ + I +K+
Sbjct: 479 NC-EVAEILLHCDWERYINVLSITRTPNVPSGTSFSTRTRYMFRWDDQGQGCI-LKISFW 536
Query: 332 ---HFKKWC--VMQSKIKTGAVNEYKKEVELMLETARSYIKTRTSGGETNNQSSTPSVT 385
+ W +++S K G ++ K V+L+ E Y++ +T PSVT
Sbjct: 537 VDWNASSWIKPMVESNCKNGQISATKDLVKLVEEFVEKYVELSKEKADT--LKPLPSVT 593
>SGD|S000001852 [details] [associations]
symbol:YFL042C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] Pfam:PF02893 SGD:S000001852 GO:GO:0016021 EMBL:D50617
EMBL:BK006940 InterPro:IPR004182 SMART:SM00568
GeneTree:ENSGT00580000081380 eggNOG:NOG304071 PIR:S78570
RefSeq:NP_116611.1 ProteinModelPortal:P43560 DIP:DIP-1182N
IntAct:P43560 MINT:MINT-393348 STRING:P43560 PaxDb:P43560
EnsemblFungi:YFL042C GeneID:850501 KEGG:sce:YFL042C CYGD:YFL042c
OMA:MASENIN OrthoDB:EOG42FWSS NextBio:966197 Genevestigator:P43560
GermOnline:YFL042C Uniprot:P43560
Length = 674
Score = 129 (50.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 34 FNLLP-DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRR 92
F +P D+ + ++C L R LY G++Y++ H+CF+SNV KV+I D+ + +
Sbjct: 204 FKSVPKDDRLLDDFNCGLNRELLYQGKLYITETHLCFNSNVLGWIAKVLIAFEDVTFMEK 263
Query: 93 SQHAFINP-AITIILRMG 109
+ A + P AI+I +MG
Sbjct: 264 TSAAGLFPSAISIETKMG 281
Score = 57 (25.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/165 (18%), Positives = 65/165 (39%)
Query: 209 FPCTAEQFFTLLF-SDDSTFTNEYRAARKDTNLV-MGQWHAADEYDGQV-REITFRSLCN 265
F C F ++F S+ + F ++ ++ + + + + + D + RE ++ +
Sbjct: 418 FDCAPGILFEIMFNSEQNEFLLDFLRGQEGSQITTIPNFTSIDGSSMTLKREYSYEKALH 477
Query: 266 SPMCPPDTAMTEYQHAVLS---PDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENS 322
P P T T Y V+ PD V +++ + VP G F R+ + E +
Sbjct: 478 FPAGPKST--TCYVAEVIKRKDPDTYYEVISSIRTPN-VPSGGSFSTKTRYLIRWNDEIT 534
Query: 323 STIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETARSYIK 367
+ + + ++ ++ G N + +LM +IK
Sbjct: 535 CLLRVSFWVEWTGSSWIKGMVENGCKNGQLEAAQLMERILSKFIK 579
>MGI|MGI:1914815 [details] [associations]
symbol:Gramd3 "GRAM domain containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1914815 Pfam:PF02893
InterPro:IPR004182 SMART:SM00568 eggNOG:NOG319417
HOGENOM:HOG000082410 HOVERGEN:HBG055715 EMBL:AC120797 EMBL:AC162035
EMBL:BC057978 IPI:IPI00461745 UniGene:Mm.24356
ProteinModelPortal:Q6PEM6 PhosphoSite:Q6PEM6 PRIDE:Q6PEM6
UCSC:uc008eyk.1 InParanoid:Q6PEM6 OrthoDB:EOG4548ZJ ChiTaRS:GRAMD3
CleanEx:MM_GRAMD3 Genevestigator:Q6PEM6
GermOnline:ENSMUSG00000001700 Uniprot:Q6PEM6
Length = 445
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 39 DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFI 98
+E + S++CAL++ LY G+++VS ICFHS VF K K+ IP + I++++ A +
Sbjct: 135 EEPLRQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAFSVTLIKKTKTALL 194
Query: 99 NPAITII 105
P II
Sbjct: 195 VPNALII 201
>RGD|1311016 [details] [associations]
symbol:Gramd3 "GRAM domain containing 3" species:10116 "Rattus
norvegicus" [GO:0005881 "cytoplasmic microtubule" evidence=ISO]
Pfam:PF02893 RGD:1311016 InterPro:IPR004182 SMART:SM00568
GeneTree:ENSGT00580000081380 CTD:65983 eggNOG:NOG319417
HOGENOM:HOG000082410 HOVERGEN:HBG055715 OrthoDB:EOG4548ZJ
EMBL:BC090001 IPI:IPI00367275 RefSeq:NP_001014033.1
UniGene:Rn.53932 PRIDE:Q5FVG8 Ensembl:ENSRNOT00000020570
GeneID:307288 KEGG:rno:307288 UCSC:RGD:1311016 InParanoid:Q5FVG8
OMA:HSEAENG NextBio:657197 ArrayExpress:Q5FVG8
Genevestigator:Q5FVG8 GermOnline:ENSRNOG00000015225 Uniprot:Q5FVG8
Length = 445
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 39 DELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFI 98
+E + S++CAL++ LY G+++VS ICFHS VF K K+ IP + I++++ A +
Sbjct: 135 EEPLRQSFTCALQKEILYQGKLFVSENWICFHSKVFGKDTKISIPAFSVTLIKKTKTALL 194
Query: 99 NPAITII 105
P II
Sbjct: 195 VPNALII 201
>MGI|MGI:2443024 [details] [associations]
symbol:Gramd1c "GRAM domain containing 1C" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2443024 GO:GO:0016021 GeneTree:ENSGT00580000081380
HOVERGEN:HBG062004 HOGENOM:HOG000294164 CTD:54762 OMA:SLIMLQK
OrthoDB:EOG4D7Z5R EMBL:AK029543 EMBL:BC037472 IPI:IPI00229750
RefSeq:NP_001165578.1 RefSeq:NP_705756.1 UniGene:Mm.19316
ProteinModelPortal:Q8CI52 PhosphoSite:Q8CI52 PRIDE:Q8CI52
DNASU:207798 Ensembl:ENSMUST00000036174 Ensembl:ENSMUST00000114677
Ensembl:ENSMUST00000179565 GeneID:207798 KEGG:mmu:207798
UCSC:uc007zgt.2 eggNOG:NOG329610 InParanoid:Q8CI52 NextBio:372053
Bgee:Q8CI52 CleanEx:MM_GRAMD1C Genevestigator:Q8CI52 Uniprot:Q8CI52
Length = 457
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 45/175 (25%), Positives = 87/175 (49%)
Query: 196 IKEEVLVG-IY-NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDG 253
I E+ L G +Y N VF +AE+ F LLF+ S F + +R ++V W +
Sbjct: 115 IPEKDLQGRLYINRVFHISAERMFELLFTS-SHFMQRFANSRNIIDVVSTPW-TVESGGN 172
Query: 254 QVREITFRSLCNSPMCPPDTAMTEYQHAVL-SPDKKIFVFETVQQAHDVPFGSYFEIHCR 312
Q+R +T+ + ++P+ TA TE Q S + + ++ ++ HDVP+ YF R
Sbjct: 173 QLRTMTYTIVLSNPLTGKYTAATEKQTLYKESREAQFYLVDSEVLTHDVPYHDYFYTLNR 232
Query: 313 WHLETISENSSTIDIKVGAHFKK--WCVMQSKIKTGA---VNEYKKEVE--LMLE 360
+ + ++ + + ++K W +++S I+ + + Y K++E L++E
Sbjct: 233 YCIVRSAKQRCRLRVSTDLKYRKQPWGLIKSLIEKNSWSSLESYFKKLESDLLME 287
>SGD|S000001122 [details] [associations]
symbol:YHR080C "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005840 "ribosome" evidence=IDA] SGD:S000001122
Pfam:PF02893 GO:GO:0016021 GO:GO:0005739 EMBL:BK006934
InterPro:IPR004182 SMART:SM00568 EMBL:U10556
GeneTree:ENSGT00580000081380 eggNOG:NOG304071 OrthoDB:EOG42FWSS
PIR:S46817 RefSeq:NP_011948.1 ProteinModelPortal:P38800
DIP:DIP-5282N IntAct:P38800 MINT:MINT-499642 STRING:P38800
PaxDb:P38800 EnsemblFungi:YHR080C GeneID:856480 KEGG:sce:YHR080C
CYGD:YHR080c HOGENOM:HOG000001060 NextBio:982164
Genevestigator:P38800 GermOnline:YHR080C Uniprot:P38800
Length = 1345
Score = 112 (44.5 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 38 PDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAF 97
P+E + +SCAL R L GRMY+S HI F+SN+ V IP I +I + A
Sbjct: 561 PNERLILDHSCALSRDILLQGRMYISDQHIGFYSNILGWVSTVFIPFKTIVQIEKRATAG 620
Query: 98 INP 100
I P
Sbjct: 621 IFP 623
Score = 71 (30.1 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 44/214 (20%), Positives = 89/214 (41%)
Query: 184 ETVTKPEKLQPFIKEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNL--V 241
ETV KP + + E + V +LF D ++ A+K++++ +
Sbjct: 750 ETVYKPAPNEKLVNESTIHASLGRVV--------NILFGKDVSYIMAILKAQKNSDISPI 801
Query: 242 MGQWHAADEYDGQVREITFRSLCNSPMCPPDTA--MTE-YQHAVLSPDKKIFVFETVQQA 298
+ +G+ R+ ++ + P T +TE QH L ++ + V +T +
Sbjct: 802 PVLVDSPTVSEGKKRDYSYVKTTPGAIGPGKTKCMITETIQHFNL--EEYVQVLQTTKTP 859
Query: 299 HDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELM 358
DVP G+ F + + L + N + + + V + +++S I+ G + +++
Sbjct: 860 -DVPSGNSFYVRTVYLLSWANNNETKLKLYVSVEWTGKSLIKSPIEKGTFDGVTDATKIL 918
Query: 359 LET-----ARSYIKTRTSGGE-TNNQSSTPSVTP 386
+E RS K + S E T S+ P + P
Sbjct: 919 VEELGNILTRSATKRKRSSKENTVTVSTLPKMEP 952
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 34/170 (20%), Positives = 66/170 (38%)
Query: 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDT-NLVMGQWHAADEYDGQVREITFRSLC 264
N+ P LLF ++ + + K+ N+ +G R +
Sbjct: 974 NENIPAPLGTVVQLLFGSNTEYMQKVITRDKNNVNVETIPKFTPSLVEGGSRHYEYTKKL 1033
Query: 265 NSPMCPPDTA--MTE-YQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISEN 321
N+ + P T +TE +H + + + V +T + DVP GS F + + L +
Sbjct: 1034 NNSIGPKQTKCLLTESIEH--MDINNYVLVTQTTKTP-DVPSGSNFAVESKIFLFWGQHD 1090
Query: 322 SSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETARSYIKTRTS 371
++ + + ++ ++ I+ G+V K V+ ML R I S
Sbjct: 1091 TTNMTVITKINWTSKSFLKGAIEKGSVEGQKVSVDYMLSELRDIISRAKS 1140
Score = 37 (18.1 bits), Expect = 6.8e-05, Sum P(3) = 6.8e-05
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 112 GHGVPPLG 119
G G+PPLG
Sbjct: 735 GTGIPPLG 742
>ASPGD|ASPL0000050763 [details] [associations]
symbol:AN2215 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF02893 EMBL:BN001307 InterPro:IPR004182
SMART:SM00568 eggNOG:NOG304071 EMBL:AACD01000035 OrthoDB:EOG42FWSS
RefSeq:XP_659819.1 EnsemblFungi:CADANIAT00008899 GeneID:2875756
KEGG:ani:AN2215.2 HOGENOM:HOG000172890 OMA:REESELW Uniprot:Q5BB65
Length = 1238
Score = 125 (49.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 33 IFNLLPDE--LVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEI 90
+F +P++ L+E YSCAL+R + GR+Y+S HICF SN+ ++I ++ I
Sbjct: 633 LFRSVPEDDYLIE-DYSCALQREIILAGRIYISEGHICFSSNILGWVTTLVISFDEVVAI 691
Query: 91 RRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNH 137
+ A + P I + A H L S + + W NH
Sbjct: 692 EKESTAMVFPNAIAIQTLHAR-HTFRSLLSRESTYDL-MVNIWKINH 736
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 254 QVREITFRSLCNSPMCPPDT-AMTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHCR 312
+ R+ ++ N + P T ++ Q L +K + V + Q DVP G+ F +
Sbjct: 915 RTRKYSYIKPLNGSIGPKQTKCISTEQLDFLDLEKAVLVTLSTQTP-DVPSGNVFTTKTK 973
Query: 313 WHLETISENSST---IDIKVGAHFKKWCVMQSKIKTGAVN 349
+ L T + N+ T + + K W ++ I+ GA++
Sbjct: 974 Y-LFTWAANNQTRFLMTCTIEWSGKSW--LKGPIEKGAID 1010
>CGD|CAL0000702 [details] [associations]
symbol:orf19.90 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000702 Pfam:PF02893 InterPro:IPR004182 SMART:SM00568
EMBL:AACQ01000106 RefSeq:XP_714299.1 GeneID:3644028
KEGG:cal:CaO19.90 Uniprot:Q59XR6
Length = 754
Score = 110 (43.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 37 LPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHA 96
L D LV+ ++CAL R L GR+Y+S +ICF+SN+ ++I + ++ +I + A
Sbjct: 222 LTDRLVD-DFACALSREILLQGRIYLSESYICFNSNLLGWVTNLVIQLEEVVKIEKRSTA 280
Query: 97 FINP-AITI 104
+ P AI+I
Sbjct: 281 GLFPNAISI 289
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/145 (21%), Positives = 56/145 (38%)
Query: 197 KEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLV-MGQWHAADEYDGQV 255
K E + + ++V F +LF + F + + + + + ++E D V
Sbjct: 417 KLEAEIELVDEVIDAPMGIVFAILFGPYTKFQTNFLETHDGSEISEISDFRPSEE-DPAV 475
Query: 256 --REITFRSLCNSPMCPPDTA--MTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHC 311
R+ +R + P T +TE + D + V TV DVP G F +
Sbjct: 476 LERKYIYRRALGYSIGPKSTKCEVTETIEHLNFADYIVVVSTTVTP--DVPSGGVFSVKT 533
Query: 312 RWHLETISENSSTIDIKVGAHFKKW 336
R+ +EN + + I H +W
Sbjct: 534 RYVFSWANENHTNLLIY---HHVEW 555
>UNIPROTKB|Q59XR6 [details] [associations]
symbol:CaO19.90 "Potential GRAM domain protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] CGD:CAL0000702 Pfam:PF02893 InterPro:IPR004182
SMART:SM00568 EMBL:AACQ01000106 RefSeq:XP_714299.1 GeneID:3644028
KEGG:cal:CaO19.90 Uniprot:Q59XR6
Length = 754
Score = 110 (43.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 37 LPDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHA 96
L D LV+ ++CAL R L GR+Y+S +ICF+SN+ ++I + ++ +I + A
Sbjct: 222 LTDRLVD-DFACALSREILLQGRIYLSESYICFNSNLLGWVTNLVIQLEEVVKIEKRSTA 280
Query: 97 FINP-AITI 104
+ P AI+I
Sbjct: 281 GLFPNAISI 289
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/145 (21%), Positives = 56/145 (38%)
Query: 197 KEEVLVGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLV-MGQWHAADEYDGQV 255
K E + + ++V F +LF + F + + + + + ++E D V
Sbjct: 417 KLEAEIELVDEVIDAPMGIVFAILFGPYTKFQTNFLETHDGSEISEISDFRPSEE-DPAV 475
Query: 256 --REITFRSLCNSPMCPPDTA--MTEYQHAVLSPDKKIFVFETVQQAHDVPFGSYFEIHC 311
R+ +R + P T +TE + D + V TV DVP G F +
Sbjct: 476 LERKYIYRRALGYSIGPKSTKCEVTETIEHLNFADYIVVVSTTVTP--DVPSGGVFSVKT 533
Query: 312 RWHLETISENSSTIDIKVGAHFKKW 336
R+ +EN + + I H +W
Sbjct: 534 RYVFSWANENHTNLLIY---HHVEW 555
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 389 360 0.00082 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 621 (66 KB)
Total size of DFA: 261 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.38u 0.13s 27.51t Elapsed: 00:00:02
Total cpu time: 27.39u 0.13s 27.52t Elapsed: 00:00:02
Start: Sat May 11 08:04:02 2013 End: Sat May 11 08:04:04 2013