Query 016456
Match_columns 389
No_of_seqs 182 out of 837
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 13:53:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016456.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016456hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hth_B Vacuolar protein sortin 95.9 0.22 7.7E-06 41.5 13.8 71 36-107 13-89 (140)
2 2cay_A VPS36 PH domain, vacuol 93.7 1.1 3.9E-05 37.4 12.4 105 36-149 25-135 (145)
3 1em2_A MLN64 protein; beta bar 93.6 0.98 3.3E-05 40.3 12.8 148 205-363 70-224 (229)
4 3p0l_A Steroidogenic acute reg 93.5 0.62 2.1E-05 41.4 11.1 147 206-367 60-213 (221)
5 2r55_A STAR-related lipid tran 92.0 4.5 0.00015 35.8 14.8 82 283-369 142-229 (231)
6 2pso_A STAR-related lipid tran 91.3 0.72 2.4E-05 41.8 8.7 80 285-370 147-229 (237)
7 1zsq_A Myotubularin-related pr 90.6 2.2 7.6E-05 43.2 12.2 74 34-107 7-87 (528)
8 1pfj_A TFIIH basal transcripti 90.3 1.2 4.3E-05 35.2 8.0 94 38-148 5-102 (108)
9 1lw3_A Myotubularin-related pr 89.9 2.6 9E-05 43.7 12.2 74 34-107 79-159 (657)
10 2yf0_A Myotubularin-related pr 89.6 0.93 3.2E-05 45.8 8.4 52 53-107 22-73 (512)
11 1ln1_A PC-TP, phosphatidylchol 89.4 7.9 0.00027 33.6 13.7 145 204-361 55-206 (214)
12 1jss_A Stard4, cholesterol-reg 88.9 4.1 0.00014 36.1 11.6 137 206-355 72-214 (224)
13 1t77_A Lipopolysaccharide-resp 87.7 0.95 3.2E-05 44.4 6.8 66 42-107 3-83 (414)
14 2wql_A Major allergen DAU C 1; 87.5 11 0.00036 31.6 12.6 145 205-369 8-154 (154)
15 3qsz_A STAR-related lipid tran 86.5 9.7 0.00033 32.3 12.2 143 205-363 31-178 (189)
16 2e3n_A Lipid-transfer protein 78.4 19 0.00065 32.2 11.3 81 287-368 155-250 (255)
17 4a8u_A Major pollen allergen B 74.4 37 0.0013 28.3 15.6 147 205-371 7-156 (159)
18 2vjg_A Major allergen DAU C 1; 74.4 36 0.0012 28.2 15.0 146 204-369 7-154 (154)
19 1icx_A Protein LLR18A, LLPR10. 74.0 36 0.0012 28.1 14.9 147 204-371 6-154 (155)
20 2vq5_A S-norcoclaurine synthas 72.0 50 0.0017 28.8 12.7 146 203-371 31-181 (201)
21 2qim_A PR10.2B; trans-zeatin, 69.3 47 0.0016 27.4 16.1 147 204-370 7-155 (158)
22 2pcs_A Conserved protein; stru 65.3 53 0.0018 26.5 16.1 142 202-368 4-148 (162)
23 1w7p_D VPS36P, YLR417W; ESCRT- 63.1 1.5 5.2E-05 44.7 0.0 51 56-106 43-94 (566)
24 2flh_A Cytokinin-specific bind 62.5 65 0.0022 26.5 14.6 143 204-369 6-153 (155)
25 3p9v_A Uncharacterized protein 62.1 47 0.0016 27.3 9.3 135 206-363 12-150 (161)
26 1tw0_A Pathogenesis-related cl 61.1 68 0.0023 26.4 15.8 147 204-370 6-154 (157)
27 2i9y_A Major latex protein-lik 60.3 74 0.0025 26.5 12.2 144 202-369 18-165 (166)
28 1zyi_A Methylosome subunit pic 60.0 7.6 0.00026 33.3 3.8 68 37-107 18-92 (171)
29 1e09_A PRU AV 1; allergen, maj 55.7 85 0.0029 25.8 14.9 148 204-371 6-156 (159)
30 3rws_A MTN13 protein; zeatin, 54.9 95 0.0032 26.1 14.9 147 203-372 11-163 (168)
31 3fo5_A Thioesterase, adipose a 51.8 30 0.001 31.4 6.7 117 205-332 92-215 (258)
32 2gcl_A Hypothetical 63.0 kDa p 49.4 42 0.0014 30.6 7.3 72 56-148 174-250 (261)
33 2d4r_A Hypothetical protein TT 44.6 82 0.0028 24.1 7.7 57 310-368 88-144 (147)
34 1t17_A Conserved hypothetical 39.1 62 0.0021 25.8 6.2 35 309-345 91-125 (148)
35 1fao_A Dual adaptor of phospho 39.0 74 0.0025 24.4 6.5 48 59-106 38-85 (126)
36 1y5o_A TFB1, RNA polymerase II 39.0 1.4E+02 0.0049 23.5 9.9 55 46-107 5-65 (115)
37 3fss_A Histone chaperone RTT10 39.0 47 0.0016 29.8 5.6 58 56-133 165-223 (237)
38 2ns9_A Hypothetical protein AP 37.7 1.5E+02 0.005 23.3 12.8 139 202-367 14-155 (157)
39 2cod_A Centaurin-delta 1; ARF 29.5 1E+02 0.0036 23.1 5.8 44 59-106 29-72 (115)
40 1wgq_A FYVE, rhogef and PH dom 29.5 1.6E+02 0.0055 21.7 6.9 47 60-106 29-75 (109)
41 1ou8_A Stringent starvation pr 28.5 72 0.0025 25.1 4.5 38 56-93 58-95 (111)
42 1yfn_A Stringent starvation pr 27.8 74 0.0025 25.3 4.5 38 56-93 59-96 (118)
43 1ou9_A Stringent starvation pr 26.5 79 0.0027 25.5 4.5 37 57-93 59-95 (129)
44 3tfz_A Cyclase; helix-GRIP, BE 24.3 2.9E+02 0.0098 22.5 8.1 47 283-335 71-118 (172)
45 3ggn_A Uncharacterized protein 23.9 1.6E+02 0.0054 23.6 6.2 105 205-334 8-113 (155)
46 2coa_A Protein kinase C, D2 ty 21.5 83 0.0028 25.3 3.7 45 62-106 31-81 (125)
47 3f08_A Uncharacterized protein 21.3 3.1E+02 0.011 21.8 15.4 101 205-332 6-108 (146)
48 3ie5_A Phenolic oxidative coup 20.1 3.7E+02 0.013 22.2 13.8 149 202-371 11-162 (165)
No 1
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=95.91 E-value=0.22 Score=41.54 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=50.1
Q ss_pred ccCCCeeeEEEE-eeeee----ccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccccc-cCcEEEEEe
Q 016456 36 LLPDELVEHSYS-CALER----SFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFI-NPAITIILR 107 (389)
Q Consensus 36 lp~~E~Ll~~f~-C~l~~----~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~-~~~i~I~~~ 107 (389)
|.++|.++.... +-|.. .-...|++|||+++|||...-- ....+.|||..|..++...+.+- .+-|.+...
T Consensus 13 L~~~E~il~~~~~V~Ly~g~~k~~~k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~f~~s~Ki~l~l~ 89 (140)
T 2hth_B 13 LEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAGIGKSAKIVVHLH 89 (140)
T ss_dssp CCTTCCEEEEEEEEEEEETTCSSCCCCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCTTSSCCEEEEEEC
T ss_pred cCCCceEEEEcCCEEEecCCCCCCCcCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccccccCceEEEEec
Confidence 667787775543 44542 2347899999999999976644 35678999999999999987642 234444443
No 2
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=93.72 E-value=1.1 Score=37.43 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=64.6
Q ss_pred ccCCCeeeEEEE-eeee----e-ccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEEecC
Q 016456 36 LLPDELVEHSYS-CALE----R-SFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIILRMG 109 (389)
Q Consensus 36 lp~~E~Ll~~f~-C~l~----~-~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~~~g 109 (389)
|.++|.++..-. ..|. + .....|++|||+.+|||-...-.....+.+||.+|.+++...+.+ ..+++|.+...
T Consensus 25 L~~~E~il~~~d~V~Ly~g~~k~~~~k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~f-g~s~Ki~l~~~ 103 (145)
T 2cay_A 25 LREGEKDIFIDQSVGLYHGKSKILQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFL-TRSPRLILFFK 103 (145)
T ss_dssp CCTTCCEEEEEEEEEEEETTEECTTCSSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSS-SSSCEEEEEES
T ss_pred cCCCCEEEEEcCCcceecCCCCCcCCCccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCcc-ccCceEEEEec
Confidence 456777765443 3343 2 345799999999999997654332367899999999999987764 23455554432
Q ss_pred CCCCCCCCCCCCCCceEEEEeeecchHHHHHHHHHHHHHH
Q 016456 110 AGGHGVPPLGSPDGRVRYKFASFWNRNHALRQLQRIAKNY 149 (389)
Q Consensus 110 ~~~~~~~~~~~~~g~~~~~f~sf~~rd~~~~~l~~~~~~~ 149 (389)
++.. .....|..|..=-. ++-+..|.++|++.
T Consensus 104 p~~~-------~~~~~KLsFk~GGa-~eF~~~l~~al~~~ 135 (145)
T 2cay_A 104 DPSS-------STEFVQLSFRKSDG-VLFSQATERALENI 135 (145)
T ss_dssp SCSS-------TTCCEEEEESSSCC-HHHHHHHHHHHHHH
T ss_pred CCCC-------CceEEEEEEcCCCc-hHHHHHHHHHHHHH
Confidence 2100 01244555543333 55666777666654
No 3
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=93.64 E-value=0.98 Score=40.29 Aligned_cols=148 Identities=7% Similarity=0.013 Sum_probs=76.8
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCcee-EeEEEEEEE
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTA-MTEYQHAVL 283 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~-~~e~Q~~~~ 283 (389)
+..+++++++.+|+.++.|.. .+..+|-.+......+..+..+ .|.|......+++|-+.+ .....+...
T Consensus 70 ~~~~v~~~~~~v~~~~~~d~~--------~r~~Wd~~~~~~~vle~~~~~t-~I~~~~~~p~~~~~~~~RDfv~~r~~~~ 140 (229)
T 1em2_A 70 LKTFLPCPAELVYQEVILQPE--------RMVLWNKTVTACQILQRVEDNT-LISYDVSAGAAGGVVSPRDFVNVRRIER 140 (229)
T ss_dssp EEEEESSCHHHHHHHTTTCHH--------HHTTTCTTEEEEEEEEEETTTE-EEEEEEECCBTTTTBCCEEEEEEEEEEE
T ss_pred EEEEecCCHHHHHHHHHhCcc--------chhhcccccceEEEEEecCCCe-EEEEEEecCcCCCCcCCCeeEEEEEEEE
Confidence 345679999999955665321 1333332222222211111122 244443211113343333 222222233
Q ss_pred cCCCCeEEEEEEeecCCCCCC-CeEEEE---EEEEEEecC--CCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHH
Q 016456 284 SPDKKIFVFETVQQAHDVPFG-SYFEIH---CRWHLETIS--ENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVEL 357 (389)
Q Consensus 284 ~~d~~~~vv~~~~~~~dVPyg-d~F~v~---~r~~it~~~--~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~ 357 (389)
. ++.++++..+...+.+|-. ++=+++ ..|+|.+.+ ++.|+|.....++..++ +=+.++.+.+...+...++.
T Consensus 141 ~-~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~~~~~~ 218 (229)
T 1em2_A 141 R-RDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEFAFH 218 (229)
T ss_dssp C-SSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHHHHH
T ss_pred c-CCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 3 4556666777777778744 333343 679999865 57899999999988775 33555666555554444444
Q ss_pred HHHHHH
Q 016456 358 MLETAR 363 (389)
Q Consensus 358 ~l~~~~ 363 (389)
+-+.++
T Consensus 219 Lr~~~~ 224 (229)
T 1em2_A 219 LRQRIS 224 (229)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 4
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=93.48 E-value=0.62 Score=41.43 Aligned_cols=147 Identities=10% Similarity=0.069 Sum_probs=77.8
Q ss_pred ceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCcee-EeEEEEEEEc
Q 016456 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTA-MTEYQHAVLS 284 (389)
Q Consensus 206 ~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~-~~e~Q~~~~~ 284 (389)
..+++++++.+|++|+.|-. .+..+|-.+...+..+..+..+. |.|..--..+.+|-+.+ .........
T Consensus 60 ~~~v~~~~~~v~~~l~~d~~--------~r~~Wd~~~~~~~vle~~~~~t~-I~y~~~~~~~~~~v~~RDfv~~r~~~~- 129 (221)
T 3p0l_A 60 EVVVDQPMERLYEELVERME--------AMGEWNPNVKEIKVLQKIGKDTF-ITHELAAEAAGNLVGPRDFVSVRCAKR- 129 (221)
T ss_dssp EEEESSCHHHHHHHHTTTGG--------GTTTSCTTCSEEEEEEECSSSEE-EEEEEECC---CCSCCEEEEEEEEEEE-
T ss_pred EEEEcCCHHHHHHHHHhccc--------hhhhcCcchheEEEEEecCCCeE-EEEEeeccccCCccCCceEEEEEEEEE-
Confidence 44679999999999986421 13333322222222111122233 44433111123343333 111222222
Q ss_pred CCCCeEEEEEEeecCCCCCC-CeEEEE---EEEEEEecCCC--ceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHH
Q 016456 285 PDKKIFVFETVQQAHDVPFG-SYFEIH---CRWHLETISEN--SSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELM 358 (389)
Q Consensus 285 ~d~~~~vv~~~~~~~dVPyg-d~F~v~---~r~~it~~~~~--~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~ 358 (389)
.++.++++..+...+++|-. ++-+++ ..|+|.+.+++ +|+|.....++..++ +=+.++.+.+...+.+ +
T Consensus 130 ~~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~----~ 204 (221)
T 3p0l_A 130 RGSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGW-LPKSIINQVLSQTQVD----F 204 (221)
T ss_dssp CSSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECCSS-CCHHHHHHHHHHHHHH----H
T ss_pred cCCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCCCC-CCHHHHHHHHHHHHHH----H
Confidence 34566666666666777753 444443 57999998865 899999999998765 3355565555455444 4
Q ss_pred HHHHHhhhh
Q 016456 359 LETARSYIK 367 (389)
Q Consensus 359 l~~~~k~v~ 367 (389)
++.+++.+.
T Consensus 205 ~~~Lr~~~~ 213 (221)
T 3p0l_A 205 ANHLRKRLE 213 (221)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 444455544
No 5
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=92.01 E-value=4.5 Score=35.83 Aligned_cols=82 Identities=10% Similarity=0.049 Sum_probs=51.2
Q ss_pred EcCCCCeEEEEEEeecCCCCCC-CeEEEE---EEEEEEecC--CCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFG-SYFEIH---CRWHLETIS--ENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVE 356 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPyg-d~F~v~---~r~~it~~~--~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~ 356 (389)
...++.++++..+...+++|-. ++-+++ ..|+|.+.+ +++|+|.....++..++ +=+.++.+.+..+..
T Consensus 142 ~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~---- 216 (231)
T 2r55_A 142 RYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGY-LPQNVVDSFFPRSMT---- 216 (231)
T ss_dssp ECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSS-CCHHHHHHHHHHHHH----
T ss_pred EcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCCC-ccHHHHHHHHhHhHH----
Confidence 3345556666776666777754 444444 458999876 67899999999988765 225666665555544
Q ss_pred HHHHHHHhhhhcC
Q 016456 357 LMLETARSYIKTR 369 (389)
Q Consensus 357 ~~l~~~~k~v~~~ 369 (389)
.+++.+++.++.+
T Consensus 217 ~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 217 RFYANLQKAVKQF 229 (231)
T ss_dssp HHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHh
Confidence 4444455554443
No 6
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=91.32 E-value=0.72 Score=41.76 Aligned_cols=80 Identities=8% Similarity=0.041 Sum_probs=51.0
Q ss_pred CCCCeEEEEEEeecCCCCCCC---eEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 285 PDKKIFVFETVQQAHDVPFGS---YFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 285 ~d~~~~vv~~~~~~~dVPygd---~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
.++.++++..+...+++|-.+ .......|+|.+.++++|+|.....++..++ +=..+.+..... .-..+..
T Consensus 147 ~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~~~~t~vt~~~~~Dp~G~--iP~~ln~~~~~~----~~~~l~~ 220 (237)
T 2pso_A 147 PKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGH--SPEWYSKGFGHL----CAAEVAR 220 (237)
T ss_dssp GGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECSTTCEEEEEEEEECCSSS--CTTTTTTHHHHH----HHHHHHH
T ss_pred CCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECCCCCEEEEEEEEeCCCCC--chHHHHHHHHHH----HHHHHHH
Confidence 356677767776677788653 2335689999999889999999999988754 222232222222 2335666
Q ss_pred HHhhhhcCC
Q 016456 362 ARSYIKTRT 370 (389)
Q Consensus 362 ~~k~v~~~~ 370 (389)
+++.+....
T Consensus 221 LR~~~~~~~ 229 (237)
T 2pso_A 221 IRNSFQPLI 229 (237)
T ss_dssp HHHTTSCC-
T ss_pred HHHHHHhhc
Confidence 677766643
No 7
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=90.58 E-value=2.2 Score=43.23 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=50.5
Q ss_pred ccccCCCeeeEEEEeeee-e--ccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccc--cc--cCcEEEEE
Q 016456 34 FNLLPDELVEHSYSCALE-R--SFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHA--FI--NPAITIIL 106 (389)
Q Consensus 34 F~lp~~E~Ll~~f~C~l~-~--~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~--~~--~~~i~I~~ 106 (389)
|.|-++|.++..-.-... . .-.+.|+||||+.+|.|.+.--.....+-||+.-|..|+|..+. .. .-.|.|.+
T Consensus 7 ~~lLpGE~i~~~~~~V~~~~~~~~~~~GtL~lTn~rLiF~~~~~~~~~~~~iPL~~I~~vek~~~~s~~~~~~~~l~I~C 86 (528)
T 1zsq_A 7 PPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 86 (528)
T ss_dssp CCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEE
T ss_pred CccCCCCeEEEecCCEEEeCCCCCceeEEEEEECCEEEEEccCCCccEEEEeeccceEEEEEcCCCCcCCCCCceEEEEc
Confidence 346677877754322221 1 23688999999999999986433345688999999999997532 11 12688888
Q ss_pred e
Q 016456 107 R 107 (389)
Q Consensus 107 ~ 107 (389)
+
T Consensus 87 K 87 (528)
T 1zsq_A 87 K 87 (528)
T ss_dssp T
T ss_pred c
Confidence 5
No 8
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=90.33 E-value=1.2 Score=35.17 Aligned_cols=94 Identities=14% Similarity=0.188 Sum_probs=57.0
Q ss_pred CCCeeeEEEEeeeeeccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEEecCCCCCCCCC
Q 016456 38 PDELVEHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIILRMGAGGHGVPP 117 (389)
Q Consensus 38 ~~E~Ll~~f~C~l~~~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~~~g~~~~~~~~ 117 (389)
.+|.|+......+.++- |+|||+.++|-.-.+.-+ .-.+.+++.||.+.+-.+...=--.|+|..+.
T Consensus 5 ~~~~ll~v~~v~yKK~d---GtL~l~~d~i~W~p~~~~-~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~--------- 71 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQD---GALYLMAERIAWAPEGKD-RFTISHMYADIKCQKISPEGKAKIQLQLVLHA--------- 71 (108)
T ss_dssp SCCEEEEESCCBCSSCB---CEEEEETTEEEEECSSSS-SCSEEEETTTCCCEEECCSSSSSCEEEEECSS---------
T ss_pred chheeEEehhheeecCC---ceEEEEcceEEEccCCCC-CceEEEehhhhhcceeCCCCCccEEEEEEEeC---------
Confidence 35666665555554432 999999999997765443 55667799999987766543200146777642
Q ss_pred CCCCCCceEEEEeeec----chHHHHHHHHHHHHH
Q 016456 118 LGSPDGRVRYKFASFW----NRNHALRQLQRIAKN 148 (389)
Q Consensus 118 ~~~~~g~~~~~f~sf~----~rd~~~~~l~~~~~~ 148 (389)
++...|.|++-. .||.+=++|+.++..
T Consensus 72 ----~~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~ 102 (108)
T 1pfj_A 72 ----GDTTNFHFSNESTAVKERDAVKDLLQQLLPK 102 (108)
T ss_dssp ----SCEEEEECCCSSCTTHHHHHHHHHHHHHHHH
T ss_pred ----CCceEEEEcCcHHHHHHHHHHHHHHHHHHHH
Confidence 123345565532 244555666666544
No 9
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=89.91 E-value=2.6 Score=43.72 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=50.9
Q ss_pred ccccCCCeeeEEEEeeee-e--ccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccc--cc--cCcEEEEE
Q 016456 34 FNLLPDELVEHSYSCALE-R--SFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHA--FI--NPAITIIL 106 (389)
Q Consensus 34 F~lp~~E~Ll~~f~C~l~-~--~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~--~~--~~~i~I~~ 106 (389)
|.+-++|.++..-.-... . .-.+.|+||||+.+|.|.+.--.....+-||+.-|..|+|..+. .. .-.|.|.+
T Consensus 79 ~~LLPGE~v~~~~~~V~~~~p~~~~~~GtL~lTnyrLiF~~~~~~~~~~~~IPL~~I~~Iekv~g~s~~g~~~~~l~I~C 158 (657)
T 1lw3_A 79 PPLLPGENIKDMAKDVTYICPFTGAVRGTLTVTNYRLYFKSMERDPPFVLDASLGVINRVEKIGGASSRGENSYGLETVC 158 (657)
T ss_dssp CCCCTTCCEEEEEEEEEEEETTTEEEEEEEEEESSEEEEEESSSSSCEEEEEEGGGEEEEEEECCTTCCSTTCSEEEEEE
T ss_pred CccCCCeeEEEEeCCEEEecCCCCceeEEEEEECCEEEEEecCCCcceEEEecccceEEEEecCCCcccCCCCceEEEEe
Confidence 557778888854332221 1 23588999999999999986433345678999999999997532 11 12588888
Q ss_pred e
Q 016456 107 R 107 (389)
Q Consensus 107 ~ 107 (389)
+
T Consensus 159 K 159 (657)
T 1lw3_A 159 K 159 (657)
T ss_dssp T
T ss_pred c
Confidence 5
No 10
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=89.55 E-value=0.93 Score=45.81 Aligned_cols=52 Identities=17% Similarity=0.219 Sum_probs=38.3
Q ss_pred ccccceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEEe
Q 016456 53 SFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIILR 107 (389)
Q Consensus 53 ~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~~ 107 (389)
..+..|+||||+.||.|.+. ....+-||+.-|.+|+|.....-...|.|.++
T Consensus 22 ~~~~~GtL~lTn~~LiF~~~---~~~e~wi~~~~I~~VeK~~~~~~~~~l~I~CK 73 (512)
T 2yf0_A 22 NKSLTGTLYLTATHLLFIDS---HQKETWILHHHIASVEKLALTTSGCPLVIQCK 73 (512)
T ss_dssp --CCEEEEEECSSEEEEEES---SSCEEEEEGGGEEEEEECCCBTTBEEEEEEET
T ss_pred CCceeEEEEEECCEEEEeCC---CCCceEecccceeEEEEecCCCCCceEEEEec
Confidence 35688999999999999983 23456789999999999754321235788875
No 11
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=89.43 E-value=7.9 Score=33.57 Aligned_cols=145 Identities=12% Similarity=0.054 Sum_probs=73.5
Q ss_pred ccceEee-cCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE
Q 016456 204 IYNDVFP-CTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV 282 (389)
Q Consensus 204 v~~~~~~-~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~ 282 (389)
-...+++ ++++++++++.. .....++........+ + .. .+ ...+.+......|+.+.. -|.......
T Consensus 55 k~~~~i~~~~~~~v~~~l~d--~~~r~~Wd~~~~~~~v-l---e~---~~--~~i~~~~~~~p~p~~~RD-~v~~~~~~~ 122 (214)
T 1ln1_A 55 KVFGVLEDCSPTLLADIYMD--SDYRKQWDQYVKELYE-Q---EC---NG--ETVVYWEVKYPFPMSNRD-YVYLRQRRD 122 (214)
T ss_dssp EEEEEETTSCHHHHHHHHHC--HHHHHHHCTTEEEEEE-E---EE---TT--EEEEEEEECCCTTSCCEE-EEEEEEEEE
T ss_pred EEEEEECCCCHHHHHHHHcC--HHHHHHHHHHHhhEEE-e---cc---CC--CEEEEEEEEcCCCCCCce-EEEEEEEEe
Confidence 4456785 999999998864 2333333222222222 1 11 12 223333333212232222 132222222
Q ss_pred EcCCCC-e-EEEEEEeecCCCCCCCeE----EEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHH
Q 016456 283 LSPDKK-I-FVFETVQQAHDVPFGSYF----EIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVE 356 (389)
Q Consensus 283 ~~~d~~-~-~vv~~~~~~~dVPygd~F----~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~ 356 (389)
...++. . +++..+...+++|-...| .....|+|++.++++|++.....++...+ +=+.++.+.+.......++
T Consensus 123 ~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~~~t~v~~~~~~Dp~G~-iP~~l~n~~~~~~~~~~l~ 201 (214)
T 1ln1_A 123 LDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGKKGSKVFMYYFDNPGGQ-IPSWLINWAAKNGVPNFLK 201 (214)
T ss_dssp ECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSSSSEEEEEEEEECCSSC-CCHHHHHHHHHTHHHHHHH
T ss_pred cccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCCCceEEEEEEEECCCCc-ccHHHHHHHHHHHhHHHHH
Confidence 323443 3 455656666778753333 35677999998888999999999988753 2233443333333333333
Q ss_pred HHHHH
Q 016456 357 LMLET 361 (389)
Q Consensus 357 ~~l~~ 361 (389)
.+-+.
T Consensus 202 ~l~k~ 206 (214)
T 1ln1_A 202 DMARA 206 (214)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 12
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=88.92 E-value=4.1 Score=36.07 Aligned_cols=137 Identities=7% Similarity=0.118 Sum_probs=68.3
Q ss_pred ceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCcee-EeEEEEEEEc
Q 016456 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTA-MTEYQHAVLS 284 (389)
Q Consensus 206 ~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~-~~e~Q~~~~~ 284 (389)
..+++++++++|++|+.... -..+ |-.+...+..+.-+..+..+.+..+. .+.+.-+.+ .....+....
T Consensus 72 ~~~v~~~~~~v~~~l~d~~~--r~~W-------d~~~~~~~vle~id~~~~I~y~~~~~-~~~~~v~~RDfv~~r~~~~~ 141 (224)
T 1jss_A 72 QGVMDDVVNNVIDHIRPGPW--RLDW-------DRLMTSLDVLEHFEENCCVMRYTTAG-QLLNIISPREFVDFSYTVGY 141 (224)
T ss_dssp EEEESSCHHHHHHHHSSSTT--HHHH-------CSSEEEEEEEEECSTTEEEEEEEECC-BTTTTBCCEEEEEEEEEEEE
T ss_pred EEEEeCCHHHHHHHHhCccc--cccc-------ccceeeEEEEEEcCCCeEEEEEEccc-ccCCCCCCCeEEEEEEEEEc
Confidence 45779999999999975321 1222 21112222211111223333334321 111112222 2222222333
Q ss_pred CCCCeEEEEEEeecCCCCCCCeEEEE---EEEEEEecCC--CceEEEEEEeEEEeeeccchhhhhhchHHHHHHHH
Q 016456 285 PDKKIFVFETVQQAHDVPFGSYFEIH---CRWHLETISE--NSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEV 355 (389)
Q Consensus 285 ~d~~~~vv~~~~~~~dVPygd~F~v~---~r~~it~~~~--~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~ 355 (389)
. +.++++..+...++.| .++-+++ ..|+|.+.++ ++|+|...+.++..++. =+.++.+.......+.+
T Consensus 142 ~-~~~vi~~~Sv~hp~~~-~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~i-P~~lvn~~~~~~~~~~~ 214 (224)
T 1jss_A 142 E-EGLLSCGVSVEWSETR-PEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMI-PQSAVDTAMASTLANFY 214 (224)
T ss_dssp T-TEEEEEEEECCCCCCC-TTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCC-CHHHHHHHHHHHHHHHH
T ss_pred C-CeEEEEEeeeecCCCC-CCCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCCCCc-cHHHHHHHHHHhHHHHH
Confidence 3 3355555555556665 3555554 6799999765 58999999999887642 24555554444433333
No 13
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=87.71 E-value=0.95 Score=44.41 Aligned_cols=66 Identities=20% Similarity=0.253 Sum_probs=48.1
Q ss_pred eeEEEEeeeee-ccccceEEEeecCeeeEEecc----CC----------ceeEEEEecccceeeeecccccccCcEEEEE
Q 016456 42 VEHSYSCALER-SFLYHGRMYVSAWHICFHSNV----FS----------KQMKVIIPIGDIDEIRRSQHAFINPAITIIL 106 (389)
Q Consensus 42 Ll~~f~C~l~~-~~~~~Grlyit~~~lcFys~~----~g----------~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~ 106 (389)
++.++.|.+.. .....|+|.||..+|||...- +. ......+++++|..|-+..-..-..||+|.+
T Consensus 3 v~~~~~~~~i~p~~~~~G~l~it~~~iyF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~i~~Rryll~~~alEif~ 82 (414)
T 1t77_A 3 VSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEEDPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFM 82 (414)
T ss_dssp CSEEEEEEEECSSCEEEEEEEECSSEEEEEECTTCHHHHHSCHHHHHHCCCTTCEEEGGGEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEEeeecceeeEEEEeCCEEEEEeCCCcccccccccchhccccCcceEecchheeeeeeeeccCcceeEEEEE
Confidence 56778899885 667889999999999998631 10 0011367899999998765543345999998
Q ss_pred e
Q 016456 107 R 107 (389)
Q Consensus 107 ~ 107 (389)
.
T Consensus 83 ~ 83 (414)
T 1t77_A 83 A 83 (414)
T ss_dssp T
T ss_pred c
Confidence 5
No 14
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=87.47 E-value=11 Score=31.62 Aligned_cols=145 Identities=16% Similarity=0.147 Sum_probs=78.2
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHH-HHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYR-AARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV- 282 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~-~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~- 282 (389)
.+.+.++|++.||.++..|...++.+.+ ...+..++ -+.|. .+..|.++|... || .. ..++++.
T Consensus 8 ~E~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~v-eGdg~-----~Gsir~~t~~~g-----~~-~~--~~kErle~ 73 (154)
T 2wql_A 8 LEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLPEG-----SP-IT--TMTVRTDA 73 (154)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECCTT-----CS-CC--EEEEEEEE
T ss_pred EEEEecCCHHHHHHHHhhcccccchhhcccceeEEEE-ECCCC-----CCeEEEEEEcCC-----CC-ce--EEEEEEEE
Confidence 3456789999999998876444433332 22222222 12221 257898887431 22 22 3455666
Q ss_pred EcCCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETA 362 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~~ 362 (389)
...++..|.... .--|+.....=++.....+.+.++++|.+... +.|.+.. -..+.-...++.++....+++.+
T Consensus 74 iD~~~~~~~y~i--ieGd~l~~~~~~~~~~ikv~p~~~ggsvvk~t--~~Y~~~~--~~~~~ee~~~~~~~~~~~~~Kai 147 (154)
T 2wql_A 74 VNKEALSYDSTV--IDGDILLGFIESIETHMVVVPTADGGSITKTT--AIFHTKG--DAVVPEENIKFADAQNTALFKAI 147 (154)
T ss_dssp EETTTTEEEEEE--EESGGGTTTEEEEEEEEEEEECTTSCEEEEEE--EEEEEST--TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EehhhCEEEEEE--EeccccccceEEEEEEEEEeeCCCCcEEEEEE--EEEEECC--CCCCCHHHHHHHHHHHHhHHHHH
Confidence 444444443322 22333322222334455666767778876554 5666521 12223334455666677888999
Q ss_pred HhhhhcC
Q 016456 363 RSYIKTR 369 (389)
Q Consensus 363 ~k~v~~~ 369 (389)
+.+|-+|
T Consensus 148 EayLlan 154 (154)
T 2wql_A 148 EAYLIAN 154 (154)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9888765
No 15
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=86.53 E-value=9.7 Score=32.34 Aligned_cols=143 Identities=10% Similarity=0.056 Sum_probs=72.6
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCcee-EeEEEEEEE
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTA-MTEYQHAVL 283 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~-~~e~Q~~~~ 283 (389)
...+++.|++++|+++.. .....++........+- +. . ++ ...+.+.. +.|. |-+.+ .........
T Consensus 31 ~~~~v~~s~~~v~~~l~D--~~~~~~W~~~~~~~~vl----e~-~--~~-~~i~y~~~--~~p~-p~~~RD~v~~~~~~~ 97 (189)
T 3qsz_A 31 GEVRLKAAADDVVKVLRD--ANAFRQWMPDVAASELL----KA-T--DT-EQYHYLDN--SAPW-PVSNRDGVYHFTYEK 97 (189)
T ss_dssp EEEEESSCHHHHHHHHHC--GGGGGGTSTTEEEEEEE----EE-C--SS-EEEEEEEE--CCSS-SCCCEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHh--HHHhhhHHHhcCEEEEE----ee-c--CC-ceEEEEEe--ecCC-CcCCcceEEEEEEEE
Confidence 356788999999998643 22222232222111111 11 1 11 22232232 2222 22222 222223333
Q ss_pred cCCCCeEEEEEEeecCCCCCCCe----EEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHH
Q 016456 284 SPDKKIFVFETVQQAHDVPFGSY----FEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELML 359 (389)
Q Consensus 284 ~~d~~~~vv~~~~~~~dVPygd~----F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l 359 (389)
..++. +.|......+.+|=... ......|+|++ ++++|+|.....++...+ +-+.++.+.+.......++.+-
T Consensus 98 ~~~g~-~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~~~~t~vt~~~~~dp~G~-iP~~lvn~~~~~~~~~~l~~L~ 174 (189)
T 3qsz_A 98 AGDGA-ITVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-DADGVDVTYQMHASPGGS-IPSWLANQTVVETPFGTLKALR 174 (189)
T ss_dssp CTTSC-EEEEEEECTTSSCCCTTSEECCCEEEEEEEEE-CSSSEEEEEEEEECSCSS-SCHHHHHHTTTHHHHHHHHHHH
T ss_pred CCCCe-EEEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-CCCeEEEEEEEEeCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 44554 44544444455664222 23458899999 888999999999988653 3455565555555444444444
Q ss_pred HHHH
Q 016456 360 ETAR 363 (389)
Q Consensus 360 ~~~~ 363 (389)
+.++
T Consensus 175 k~~~ 178 (189)
T 3qsz_A 175 SHLR 178 (189)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 4433
No 16
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=78.42 E-value=19 Score=32.24 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=43.5
Q ss_pred CCeEEEEEEeecCCCCCCCeE-EEE------EEEEEEec--------CCCceEEEEEEeEEEeeeccchhhhhhchHHHH
Q 016456 287 KKIFVFETVQQAHDVPFGSYF-EIH------CRWHLETI--------SENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEY 351 (389)
Q Consensus 287 ~~~~vv~~~~~~~dVPygd~F-~v~------~r~~it~~--------~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~ 351 (389)
+.++++..+...+++|-..-| +++ +.|.+.+. ++++|+|...+.++..++ +=+.++.+.+..+.
T Consensus 155 ~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~~~l~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~ 233 (255)
T 2e3n_A 155 ETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDNILCKITYVANVNPGGW-APASVLRAVAKREY 233 (255)
T ss_dssp CEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CCCCCCGGGEEEEEEEEEEEECSSC-CCHHHHHHHHHHHH
T ss_pred CEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCCcccccCCCcEEEEEEEEeCCCCc-cCHHHHHHHHhccc
Confidence 356676666666777765443 333 22233322 236899999999888764 22334444444444
Q ss_pred HHHHHHHHHHHHhhhhc
Q 016456 352 KKEVELMLETARSYIKT 368 (389)
Q Consensus 352 k~~~~~~l~~~~k~v~~ 368 (389)
...++.+-+.+++..+.
T Consensus 234 ~~~l~~L~k~v~~~~~~ 250 (255)
T 2e3n_A 234 PKFLKRFTSYVQEKTAG 250 (255)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhccC
Confidence 44455555555544443
No 17
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=74.43 E-value=37 Score=28.31 Aligned_cols=147 Identities=13% Similarity=0.190 Sum_probs=79.3
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV- 282 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~- 282 (389)
.+.+.++|++.+|.++..|-...+.+.+- .-+..++.-+.|. .+..|.++|.. -+| .. ..++++.
T Consensus 7 ~ei~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg-----~Gsir~~~~~~-----g~~-~~--~~kErl~~ 73 (159)
T 4a8u_A 7 TEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGG-----PGTIKKISFPE-----GFP-FK--YVKDRVDE 73 (159)
T ss_dssp EEEEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSS-----TTCEEEEECCT-----TSS-CS--EEEEEEEE
T ss_pred EEEEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCC-----CceEEEEEEec-----CCC-cc--EEEEEEEE
Confidence 45578899999999985643333333332 2333444456663 25689888762 122 22 3444555
Q ss_pred EcCCCCeEEEEEEeecCCCCCCC-eEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFGS-YFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPygd-~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+..++..|..... --|++ ++ .=.....+.+.+.++++|.++..+ .|.+.. -..+....++..++....+++.
T Consensus 74 iD~~~~~~~y~ii--egd~l-~~~~~~y~~ti~v~p~~~ggs~v~wt~--~y~~~~--~~~~~~~~~k~~~~~~~~~~k~ 146 (159)
T 4a8u_A 74 VDHTNFKYSYSVI--EGGPV-GDTLEKISNEIKIVATPNGGSILKINN--KYHTKG--DHEVKAEQIKASKEMGETLLRA 146 (159)
T ss_dssp EETTTTEEEEEEE--EETTC-BTTEEEEEEEEEEEECTTSCEEEEEEE--EEEESS--SCCC-CHHHHHHHHHHHHHHHH
T ss_pred EccccCEEEEEEe--eCCCC-ccceEEEEEEEEEEECCCCceEEEEEE--EEEECC--CCcCCHHHHHHHHHHHHHHHHH
Confidence 3444444433221 12332 22 222333445566666678755554 565421 1122233445567788899999
Q ss_pred HHhhhhcCCC
Q 016456 362 ARSYIKTRTS 371 (389)
Q Consensus 362 ~~k~v~~~~~ 371 (389)
+..+|-+|..
T Consensus 147 ie~yll~np~ 156 (159)
T 4a8u_A 147 VESYLLAHSD 156 (159)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHhhChh
Confidence 9999988764
No 18
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=74.42 E-value=36 Score=28.22 Aligned_cols=146 Identities=15% Similarity=0.157 Sum_probs=75.8
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~ 282 (389)
..+.+.++|++.+|.+++.|-.....+.+- .-+..++ -+.+. .+..|.++|.. |.+.. ..++++.
T Consensus 7 ~~ei~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~-eGdg~-----~Gsir~~~~~~------g~~~~--~~kErl~ 72 (154)
T 2vjg_A 7 SLEITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDGG-----AGTVRIITLPE------GSPIT--TMTVRTD 72 (154)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSSS-----TTCEEEEECCT------TCSCC--EEEEEEE
T ss_pred EEEEEecCCHHHHHHhhhCCccccchhhccCceeEEEE-eCCCC-----CceEEEEEecC------CCCce--EEEEEEE
Confidence 345678999999999988753333233331 2233333 33321 36789888742 22222 2344554
Q ss_pred -EcCCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 283 -LSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 283 -~~~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+..++..|.....- -|++-...=.....+.+.+.+++.|.+...+ .|.+.. -..+.-..++..++....+++.
T Consensus 73 ~iD~~~~~~~y~iie--gd~l~~~~~~~~~ti~v~p~~~ggs~v~wt~--~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 146 (154)
T 2vjg_A 73 AVNKEALSYDSTVID--GDILLGFIESIETHMVVVPTADGGSITKTTA--IFHTKG--DAVVPEENIKFADAQNTALFKA 146 (154)
T ss_dssp EEETTTTEEEEEEEE--SGGGTTTEEEEEEEEEEEECTTSCEEEEEEE--EEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCEEEEEEEe--cCCCccceEEEEEEEEEEECCCCcEEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 44445544333221 2222111222333445566656678755544 565421 1122223345567788888999
Q ss_pred HHhhhhcC
Q 016456 362 ARSYIKTR 369 (389)
Q Consensus 362 ~~k~v~~~ 369 (389)
++.+|-+|
T Consensus 147 ie~yllan 154 (154)
T 2vjg_A 147 IEAYLIAN 154 (154)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 98888654
No 19
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=74.01 E-value=36 Score=28.05 Aligned_cols=147 Identities=10% Similarity=0.086 Sum_probs=78.0
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV- 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~- 282 (389)
..+.+.++|++.+|.++-.|-...+.+++...+..++.-+.|. .+..|.++|. + |..... .++++.
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~~~--~kErl~~ 72 (155)
T 1icx_A 6 ENEQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGG-----PGTIKKIIAI-H-----DGHTSF--VLHKLDA 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSS-----TTCEEEEEEE-S-----SSSEEE--EEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCC-----CCeEEEEEEe-c-----CCccee--EEEEEEE
Confidence 3456789999999998643322233444433333344445662 2568999886 2 222222 344444
Q ss_pred EcCCCCeEEEEEEeecCCCCCC-CeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFG-SYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPyg-d~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+..++..|.....- -|+ .. ..=+....|.+.+.+++.|.+...+ +|.+..- .......+..++.+..+++.
T Consensus 73 ~D~~~~~~~y~iie--Gd~-~~~~~~~~~~~~~v~~~~~~gs~v~w~~--~y~~~~~---~~~~~~~~~~~~~~~~~~k~ 144 (155)
T 1icx_A 73 IDEANLTYNYSIIG--GEG-LDESLEKISYESKILPGPDGGSIGKINV--KFHTKGD---VLSETVRDQAKFKGLGLFKA 144 (155)
T ss_dssp EEGGGTEEEEEEEE--ETT-SCTTEEEEEEEEEEEECGGGCEEEEEEE--EEEESSS---SCCHHHHTTHHHHHHHHHHH
T ss_pred EeccCCEEEEEEEe--cCC-CccceEEEEEEEEEEecCCCCEEEEEEE--EEEECCC---CCCHHHHHHHHHHHHHHHHH
Confidence 33444444332221 122 22 2223344555666554567665555 5554311 12222233446778999999
Q ss_pred HHhhhhcCCC
Q 016456 362 ARSYIKTRTS 371 (389)
Q Consensus 362 ~~k~v~~~~~ 371 (389)
++.++.+|..
T Consensus 145 ie~yll~~p~ 154 (155)
T 1icx_A 145 IEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHHhCCC
Confidence 9999988753
No 20
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=71.98 E-value=50 Score=28.80 Aligned_cols=146 Identities=10% Similarity=0.073 Sum_probs=79.2
Q ss_pred cccceEeecCHHHHHhHhcC-CCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEE
Q 016456 203 GIYNDVFPCTAEQFFTLLFS-DDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQH 280 (389)
Q Consensus 203 ~v~~~~~~~s~~~lf~llF~-d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~ 280 (389)
...+.++++|++.+|.++.+ |-..++.+++- ..+..++. +.|. .+..|.++|.- |+... ..+++
T Consensus 31 ~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg-----~GsIR~lt~~~------G~~~~--~vkEr 96 (201)
T 2vq5_A 31 IHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGG-----VGTILDMTFVP------GEFPH--EYKEK 96 (201)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSS-----TTCEEEEECCT------TCSSC--EEEEE
T ss_pred EEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCC-----CCeEEEEEecC------CCccc--EEEEE
Confidence 34566789999999998766 55445455543 23444656 7763 25789888751 22112 23344
Q ss_pred EE-EcCCCCeEEEEEEee-cCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccc-hhhhhhchHHHHHHHHHH
Q 016456 281 AV-LSPDKKIFVFETVQQ-AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVM-QSKIKTGAVNEYKKEVEL 357 (389)
Q Consensus 281 ~~-~~~d~~~~vv~~~~~-~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~-K~~Ie~~~~~~~k~~~~~ 357 (389)
+. +..++..|.....-- ....||. +|....+. .+.+++.|.+ ...++|.+..-. ... +.. ..++.+..
T Consensus 97 le~iDde~~~~sYsiieGd~l~~~~~-~y~~tikv--~p~~dggs~v--kWt~~ye~~~~~~~~~-e~~---~~~~~~~~ 167 (201)
T 2vq5_A 97 FILVDNEHRLKKVQMIEGGYLDLGVT-YYMDTIHV--VPTGKDSCVI--KSSTEYHVKPEFVKIV-EPL---ITTGPLAA 167 (201)
T ss_dssp EEEEETTTTEEEEEEEEEGGGGTTEE-EEEEEEEE--EEEETTEEEE--EEEEEEEECGGGHHHH-TTT---CCSHHHHH
T ss_pred EEEEchhhCEEEEEEEecCcccccee-EEEEEEEE--EECCCCCeEE--EEEEEEEECCCCCCCC-hhH---HHHHHHHH
Confidence 44 444454444333211 1112332 44444443 4445566764 444566653211 111 111 34667888
Q ss_pred HHHHHHhhhhcCCC
Q 016456 358 MLETARSYIKTRTS 371 (389)
Q Consensus 358 ~l~~~~k~v~~~~~ 371 (389)
+++.++.++.++..
T Consensus 168 ~~KaiE~yLlanp~ 181 (201)
T 2vq5_A 168 MADAISKLVLEHKS 181 (201)
T ss_dssp HHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999988875
No 21
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=69.30 E-value=47 Score=27.41 Aligned_cols=147 Identities=10% Similarity=0.094 Sum_probs=78.6
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV- 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~- 282 (389)
..+.+.++|++.+|.++-.|-...+.+++...+...+.-+.|. .+..|.++|. + |.... ..++++.
T Consensus 7 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg-----~Gsir~~~~~-~-----g~~~~--~~kErl~~ 73 (158)
T 2qim_A 7 QDEYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGG-----PGTIKKLTFI-E-----GGESK--YVLHKIEA 73 (158)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEEE--EEEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCC-----CCeEEEEEEc-C-----CCcce--eEEEEEEE
Confidence 4456889999999997643432233444433333344445662 2578999987 2 22111 2344444
Q ss_pred EcCCCCeEEEEEEeecCCCCCCC-eEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFGS-YFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPygd-~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+..++..|.....- -+ +..+ .=+....+.+.+.+++.|.+.... +|.+.. -.......++..++.+..+++.
T Consensus 74 ~D~~~~~~~y~iie--G~-~~~~~~~~~~~~~~v~~~~~~gs~v~wt~--~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 146 (158)
T 2qim_A 74 IDEANLGYNYSIVG--GV-GLPDTIEKISFETKLVEGANGGSIGKVTI--KIETKG--DAQPNEEEGKAAKARGDAFFKA 146 (158)
T ss_dssp EEGGGTEEEEEEEE--ES-SCCCSEEEEEEEEEEEECSTTCEEEEEEE--EEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCCEEEEEEEe--cc-CCccceEEEEEEEEEEecCCCCEEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 33444444332221 12 2232 223344556667655668765554 555421 0111122333456788999999
Q ss_pred HHhhhhcCC
Q 016456 362 ARSYIKTRT 370 (389)
Q Consensus 362 ~~k~v~~~~ 370 (389)
++.++.++.
T Consensus 147 ie~yll~~p 155 (158)
T 2qim_A 147 IESYLSAHP 155 (158)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHHhCc
Confidence 999998874
No 22
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=65.29 E-value=53 Score=26.51 Aligned_cols=142 Identities=11% Similarity=0.065 Sum_probs=70.7
Q ss_pred ccccceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEE
Q 016456 202 VGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHA 281 (389)
Q Consensus 202 ~~v~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~ 281 (389)
....+.+++.|++++|.++ .| ..-+.+++- +...+.. .. .+.. ....+.+ +|+-.......-++
T Consensus 4 ~i~~~~~i~ap~e~Vw~~l-~D-~e~~~~w~p--~~~~~~~-----~~-~~~~--~~~~~~~----~g~~~~~~~~~~~~ 67 (162)
T 2pcs_A 4 NGNGSIELKGTVEEVWSKL-MD-PSILSKCIM--GCKSLEL-----IG-EDKY--KADLQIG----IAAVKGKYDAIIEV 67 (162)
T ss_dssp EEEEEEEEESCHHHHHHHH-TC-HHHHHHHST--TEEEEEE-----EE-TTEE--EEEEEEC----CGGGCEEEEEEEEE
T ss_pred EEeeEEEecCCHHHHHHHh-cC-HHHHHhhCC--CceEeEE-----eC-CCeE--EEEEEEE----eeeEEEEEEEEEEE
Confidence 3445678999999999976 43 333444432 1112211 11 1211 1122222 34422222222122
Q ss_pred -EEcCCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeee--ccchhhhhhchHHHHHHHHHHH
Q 016456 282 -VLSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKW--CVMQSKIKTGAVNEYKKEVELM 358 (389)
Q Consensus 282 -~~~~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~--t~~K~~Ie~~~~~~~k~~~~~~ 358 (389)
...+. ..+.+.....-. +..+.....|.++..+++.|+|.+...+.+... .++..++...+ +..++.+
T Consensus 68 ~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~----~~~~~~~ 138 (162)
T 2pcs_A 68 TDIKPP-YHYKLLVNGEGG----PGFVNAEGVIDLTPINDECTQLTYTYSAEVGGKVAAIGQRMLGGVA----KLLISDF 138 (162)
T ss_dssp EEEETT-TEEEEEEEEEET----TEEEEEEEEEEEEESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHH----HHHHHHH
T ss_pred EecCCC-cEEEEEEEecCC----CccEEEEEEEEEEecCCCcEEEEEEEEEEECCCHHHhhHHHHHHHH----HHHHHHH
Confidence 22332 456655432211 234467888999886667899999988887542 23333333322 2334555
Q ss_pred HHHHHhhhhc
Q 016456 359 LETARSYIKT 368 (389)
Q Consensus 359 l~~~~k~v~~ 368 (389)
++.+++.+..
T Consensus 139 ~~~lk~~~e~ 148 (162)
T 2pcs_A 139 FKKIQKEIAK 148 (162)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhcc
Confidence 5555555544
No 23
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=63.07 E-value=1.5 Score=44.74 Aligned_cols=51 Identities=14% Similarity=0.335 Sum_probs=0.0
Q ss_pred cceEEEeecCeeeEEeccCCceeEEEEecccceeeeecccccc-cCcEEEEE
Q 016456 56 YHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFI-NPAITIIL 106 (389)
Q Consensus 56 ~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~-~~~i~I~~ 106 (389)
..|++|+|.++|||.-..-....-+.|+|++|..++...+.+- .|-|.+..
T Consensus 43 q~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agflksSpKI~L~l 94 (566)
T 1w7p_D 43 QRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLTRSPRLILFF 94 (566)
T ss_dssp ----------------------------------------------------
T ss_pred cCceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeeccccCCCceEEee
Confidence 6899999999999976655545678999999999999765532 23344443
No 24
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=62.47 E-value=65 Score=26.54 Aligned_cols=143 Identities=13% Similarity=0.218 Sum_probs=72.9
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~ 282 (389)
..+.+.++|++.+|.++.+|-..+..+++- ..+..++.-+.|. .+..|.++|.- -.+| .. .++++.
T Consensus 6 ~~e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~~----g~~~--~~--~kErl~ 72 (155)
T 2flh_A 6 NTQTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGG-----VGTILIFNFLP----EVSP--SY--QREEIT 72 (155)
T ss_dssp EEEEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSS-----TTCEEEEEECT----TSSS--CE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCC-----CCeEEEEEeeC----CCCC--cE--EEEEEE
Confidence 345688999999999977765555455542 2222233335552 25789888851 0122 22 333444
Q ss_pred -EcCCCCeEEEEEEee-cCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHH--HHHHHH
Q 016456 283 -LSPDKKIFVFETVQQ-AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYK--KEVELM 358 (389)
Q Consensus 283 -~~~d~~~~vv~~~~~-~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k--~~~~~~ 358 (389)
+..++..|.....-- ....||. +|....+ +.+.+++.|.+.. .++|.+..=. .+ -.+..+ +.+..+
T Consensus 73 ~iD~~~~~~~y~iieg~~l~~~~~-~~~~~i~--v~p~~~ggs~v~w--t~~y~~~~~~--~~---~~~~~~~~~~~~~~ 142 (155)
T 2flh_A 73 EFDESSHEIGLQVIEGGYLSQGLS-YYKTTFK--LSEIEEDKTLVNV--KISYDHDSDI--EE---KVTPTKTSQSTLMY 142 (155)
T ss_dssp EEETTTTEEEEEEEEEGGGGTTCS-EEEEEEE--EEEEETTEEEEEE--EEEEEC------------CCHHHHHHHHHHH
T ss_pred EEeCCCCEEEEEEEeccccccCce-EEEEEEE--EEECCCCCEEEEE--EEEEEECCCC--cc---ChhHhhhHHHHHHH
Confidence 444445433332211 1123444 4444444 3454556675544 4466653211 11 223445 678888
Q ss_pred HHHHHhhhhcC
Q 016456 359 LETARSYIKTR 369 (389)
Q Consensus 359 l~~~~k~v~~~ 369 (389)
++.++.++.++
T Consensus 143 ~k~ie~yll~~ 153 (155)
T 2flh_A 143 LRRLERYLSNG 153 (155)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHhhC
Confidence 88888888665
No 25
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=62.13 E-value=47 Score=27.28 Aligned_cols=135 Identities=10% Similarity=0.149 Sum_probs=69.8
Q ss_pred ceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEE-ecCCCCCCCceeEeEEEEEEEc
Q 016456 206 NDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRS-LCNSPMCPPDTAMTEYQHAVLS 284 (389)
Q Consensus 206 ~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~-~l~~~lgpk~t~~~e~Q~~~~~ 284 (389)
..+.+.|++++|.++ .|=.. |..+ .. ...+|...++ +..| ... .+ .+|+....-.-+-++...
T Consensus 12 s~~I~ap~e~v~~lv-~Dve~-w~~~-----yp--~~~p~~~~~~--~~~~---~~~a~l--~vg~~~~~~~~~s~~~~~ 75 (161)
T 3p9v_A 12 DLEIPASYDEVFDLL-ADVPK-SASH-----FP--KVDKLVDLGN--NAYR---WEMEKV--GVDKHAIQSVYACTYHAD 75 (161)
T ss_dssp EEEESSCHHHHHHHH-TCHHH-HHTT-----ST--TEEEEEEEET--TEEE---EEECCB--SSGGGCBCCEEEEEEEEE
T ss_pred EEEEcCCHHHHHHHH-hChhh-hHhh-----CC--CeEEEEEcCC--CceE---EEEEEE--eeeeEEEEEEEEEEEEEc
Confidence 346799999999976 32111 1111 01 2346655432 2222 222 22 244433211222233444
Q ss_pred CCCCeEEEEEEeecCCCCCCCe-EEEEEEEEEEecCCCceEEEEEEeEEEee--eccchhhhhhchHHHHHHHHHHHHHH
Q 016456 285 PDKKIFVFETVQQAHDVPFGSY-FEIHCRWHLETISENSSTIDIKVGAHFKK--WCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 285 ~d~~~~vv~~~~~~~dVPygd~-F~v~~r~~it~~~~~~c~l~V~~~V~f~K--~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+++..+..+.. + |+- =....+|.+++.++++|+|......+|.. +.+++.++..-.........+.+.+.
T Consensus 76 ~~~~~I~~~~~----~---g~~~~~l~g~w~f~p~~~g~t~V~~~~~~e~~~pl~~ll~~~~~~~~~~~~~~~v~af~~r 148 (161)
T 3p9v_A 76 KEAGKITWSPI----K---GEGNGVVSGSWTLSAKGDNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVDTYMAN 148 (161)
T ss_dssp TTTTEEEEEEC----T---TSTTEEEEEEEEEEESSSSCEEEEEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEe----c---CccceeEEEEEEEEECCCCeEEEEEEEEEEEcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43455554432 2 333 25677999999988889999999888863 34555554444444444444444444
Q ss_pred HH
Q 016456 362 AR 363 (389)
Q Consensus 362 ~~ 363 (389)
+.
T Consensus 149 a~ 150 (161)
T 3p9v_A 149 LK 150 (161)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 26
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=61.11 E-value=68 Score=26.38 Aligned_cols=147 Identities=11% Similarity=0.102 Sum_probs=78.6
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV- 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~- 282 (389)
..+.+.++|++.+|.++-.|-...+.+++...+..++.-+.|. .+..|.++|. + |... -..++++.
T Consensus 6 ~~e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~-----~Gsir~~~~~-~-----G~~~--~~~kErl~~ 72 (157)
T 1tw0_A 6 RDETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGG-----VGTIKKITAN-E-----GDKT--SFVLQKVDA 72 (157)
T ss_dssp EEEEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSS-----TTCEEEEEEE-E-----TTEE--EEEEEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCC-----CCeEEEEEee-C-----CCcc--ceEEEEEEE
Confidence 3456889999999998652433233333322233334445662 2568999987 2 2211 12344555
Q ss_pred EcCCCCeEEEEEEeecCCCCCC-CeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHH
Q 016456 283 LSPDKKIFVFETVQQAHDVPFG-SYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLET 361 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPyg-d~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~ 361 (389)
+..++..|.....- -|+ .. ..=+....|.+.+.+++.|.+...+ +|.+.. -.......++..++.+..+++.
T Consensus 73 ~D~~~~~~~y~iie--Gd~-~~~~~~~~~~~~~v~~~~~~gs~v~w~~--~y~~~~--~~~~~~~~~~~~~~~~~~~~k~ 145 (157)
T 1tw0_A 73 IDEANLGYDYSIVG--GTG-LPESLEKLSFETKVVAGSGGGSISKVTL--KFHTKG--DAPLSDAVRDDALAKGAGFFKA 145 (157)
T ss_dssp EETTTTEEEEEEEE--CTT-SCTTEEEEEEEEEEEECSSSSEEEEEEE--EEEEST--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred EeccCCEEEEEEEe--cCC-CccceEEEEEEEEEEecCCCCEEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHHHHH
Confidence 44455544433221 222 22 2233444556666655568766555 555421 0111122333456778999999
Q ss_pred HHhhhhcCC
Q 016456 362 ARSYIKTRT 370 (389)
Q Consensus 362 ~~k~v~~~~ 370 (389)
++.++.+|.
T Consensus 146 ie~yll~~p 154 (157)
T 1tw0_A 146 IEGYVLANP 154 (157)
T ss_dssp HHHHHHHCG
T ss_pred HHHHHHhCc
Confidence 999998774
No 27
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=60.30 E-value=74 Score=26.50 Aligned_cols=144 Identities=9% Similarity=0.131 Sum_probs=76.7
Q ss_pred ccccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEE
Q 016456 202 VGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQH 280 (389)
Q Consensus 202 ~~v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~ 280 (389)
+...+.++++|++.+|.++-+|...+ .+++- ......+.-+.|.. .+..|.++|.. |.+. ...+++
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~~l-pk~~P~~i~s~~~~eGd~gg----~Gsir~~~~~~------gg~~--~~~kEr 84 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPHHV-SKASPGNIQGCDLHEGDWGT----VGSIVFWNYVH------DGEA--KVAKER 84 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSSCC-CCSCSSCCSSCCCCSCCSCS----TTCCCEEEEEE------TTEE--EEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhcccccc-cccccccceEEEEEcCCCCC----CCeEEEEEEec------CCCc--eEEEEE
Confidence 34556788999999999877653222 22221 23333444455632 35789998874 2222 233445
Q ss_pred EE-EcCCCCeEEEEEEeecCCCCCCCeE-EEEEEEEEEecC-CCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHH
Q 016456 281 AV-LSPDKKIFVFETVQQAHDVPFGSYF-EIHCRWHLETIS-ENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVEL 357 (389)
Q Consensus 281 ~~-~~~d~~~~vv~~~~~~~dVPygd~F-~v~~r~~it~~~-~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~ 357 (389)
+. +..++..|..... --++ .+.| .....+.+.+.+ ++.|.+... ++|.+.. .-+... +...+.+..
T Consensus 85 l~~iD~~~~~~~y~ii--eGd~--~~~~~~~~~ti~v~p~~~g~gs~v~wt--~~ye~~~---~~~~~p--~~~~~~~~~ 153 (166)
T 2i9y_A 85 IEAVEPDKNLITFRVI--EGDL--MKEYKSFLLTIQVTPKPGGPGSIVHWH--LEYEKIS---EEVAHP--ETLLQFCVE 153 (166)
T ss_dssp EEEEETTTTEEEEEEC--CTTG--GGTEEEEEEEEEEEEEEETTEEEEEEE--EEEEESS---TTTCCT--HHHHHHHHH
T ss_pred EEEEeccCcEEEEEEE--eCCC--CCCeeEEEEEEEEEECCCCCCcEEEEE--EEEEECC---CCCCCH--HHHHHHHHH
Confidence 55 4455555544321 1222 2223 344555566653 346765544 4565421 111111 345677888
Q ss_pred HHHHHHhhhhcC
Q 016456 358 MLETARSYIKTR 369 (389)
Q Consensus 358 ~l~~~~k~v~~~ 369 (389)
+++.+..+|.++
T Consensus 154 ~~k~ie~~l~~~ 165 (166)
T 2i9y_A 154 VSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHhhC
Confidence 888888888765
No 28
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=59.95 E-value=7.6 Score=33.28 Aligned_cols=68 Identities=13% Similarity=0.250 Sum_probs=39.8
Q ss_pred cCC--CeeeEE---EEeeeeeccccceEEEeecCeeeEEeccCCceeEEEEeccccee--eeecccccccCcEEEEEe
Q 016456 37 LPD--ELVEHS---YSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDE--IRRSQHAFINPAITIILR 107 (389)
Q Consensus 37 p~~--E~Ll~~---f~C~l~~~~~~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~--I~k~~~~~~~~~i~I~~~ 107 (389)
|++ |.++.. -.+.+.....-.|.||||++.|.+.+. ...-+.||+..|.= |.+....+-.+.|-+.+.
T Consensus 18 ~p~~~E~v~~~~~~v~~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~~~~p~~clY~Qld 92 (171)
T 1zyi_A 18 PPGSAEGLRQQQPETEAVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDLNAYPREHLYVMVN 92 (171)
T ss_dssp ---------CBCSSEEEEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSCSSCCSCCEEEEEE
T ss_pred CCCCccceEEEcCCEEEEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCCCCCCCceEEEEEe
Confidence 444 555533 345555444568999999999999887 24678899988853 344433222356666654
No 29
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=55.71 E-value=85 Score=25.80 Aligned_cols=148 Identities=14% Similarity=0.188 Sum_probs=78.6
Q ss_pred ccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE
Q 016456 204 IYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV 282 (389)
Q Consensus 204 v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~ 282 (389)
..+.+.++|++.+|.++-.|-...+.+++- ..+...+.-+.|. .+..|.++|. + |..... .++++.
T Consensus 6 ~~e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg-----~Gsvr~~~~~-~-----G~~~~~--~kErl~ 72 (159)
T 1e09_A 6 ESEFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGG-----PGTIKKITFG-E-----GSQYGY--VKHKID 72 (159)
T ss_dssp EEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSS-----TTCEEEEEEC-C-----SSSCEE--EEEEEE
T ss_pred EEEEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCC-----CceEEEEEec-C-----CCCceE--EEEEEE
Confidence 445688999999999764332223334432 2233334445662 2568999885 2 222122 344555
Q ss_pred -EcCCCCeEEEEEEeecCCCCCCCeE-EEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHH
Q 016456 283 -LSPDKKIFVFETVQQAHDVPFGSYF-EIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLE 360 (389)
Q Consensus 283 -~~~d~~~~vv~~~~~~~dVPygd~F-~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~ 360 (389)
+..++..|.... ..+=+..+.| .....+.+.+.+++.|.+.... +|.+.. -..+....++..++.+..+++
T Consensus 73 ~~D~~~~~~~y~i---ieG~~~~~~~~~~~~~~~v~~~~~~gs~v~wt~--~y~~~~--~~~~~~~~~~~~~~~~~~~~k 145 (159)
T 1e09_A 73 SIDKENYSYSYTL---IEGDALGDTLEKISYETKLVASPSGGSIIKSTS--HYHTKG--NVEIKEEHVKAGKEKASNLFK 145 (159)
T ss_dssp EEETTTTEEEEEE---CCCTTTGGGEEEEEEEEEECCCTTSSEEEEEEE--EEEECS--SCCCCHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCEEEEEE---EecccCcccceEEEEEEEEEecCCCCEEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHHHH
Confidence 445555554432 2222223222 3334455556555678665554 555421 011122223345778899999
Q ss_pred HHHhhhhcCCC
Q 016456 361 TARSYIKTRTS 371 (389)
Q Consensus 361 ~~~k~v~~~~~ 371 (389)
.+++++.++.+
T Consensus 146 ~ie~yll~~~~ 156 (159)
T 1e09_A 146 LIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhChh
Confidence 99999988754
No 30
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=54.90 E-value=95 Score=26.07 Aligned_cols=147 Identities=10% Similarity=0.124 Sum_probs=78.8
Q ss_pred cccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEE
Q 016456 203 GIYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHA 281 (389)
Q Consensus 203 ~v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~ 281 (389)
...+.+.++|++.+|.++..|-...+.+.+- .-+..++.-+.+. .+..|.++|. ||- . ...+++
T Consensus 11 ~~~ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdgg-----~Gsir~~t~~-------g~~-~--~~kErl 75 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDGG-----PGTIKKLTFV-------GDF-G--STKQHI 75 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSSS-----TTCEEEEEES-------SSS-C--EEEEEE
T ss_pred EEEEEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCCC-----CCeEEEEEEc-------CCC-e--EEEEEE
Confidence 3456678999999999875643232333321 2222333334431 3578998887 221 1 234455
Q ss_pred E-EcCCCCeEEEEEEeecCCCCCCC--eEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchh--hhhhchHHHHHHHHH
Q 016456 282 V-LSPDKKIFVFETVQQAHDVPFGS--YFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQS--KIKTGAVNEYKKEVE 356 (389)
Q Consensus 282 ~-~~~d~~~~vv~~~~~~~dVPygd--~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~--~Ie~~~~~~~k~~~~ 356 (389)
. ...++..|..... --|+ .++ .=.....+.+.+.++++|.++..+ .|.+.. + .+.-..++..++...
T Consensus 76 ~~iD~~~~~~sY~ii--egd~-l~~~p~~~y~~ti~v~p~~~ggs~v~wt~--~y~~~~---~d~~~~~e~~k~~~~~~~ 147 (168)
T 3rws_A 76 DMVDRENCAYTYSVY--EGIA-LSDQPLEKIVFEFKLVPTPEEGCIVKSTT--KYYTKG---DDIELSKDYLEAGIERFE 147 (168)
T ss_dssp EEEETTTTEEEEEEC--SSCC-BTTBCEEEEEEEEEEEECTTSCEEEEEEE--EEEECS---SSCCCCHHHHHHHHHHHH
T ss_pred EEEcccCCEEEEEEE--ccCc-ccCcCceEEEEEEEEEECCCCceEEEEEE--EEEECC---CccCCCHHHHHHHHHHHH
Confidence 5 3444454443321 1222 222 122233445566666678755544 555421 1 122223455777888
Q ss_pred HHHHHHHhhhhcCCCC
Q 016456 357 LMLETARSYIKTRTSG 372 (389)
Q Consensus 357 ~~l~~~~k~v~~~~~~ 372 (389)
.+++.+..+|-+|...
T Consensus 148 ~~~k~ie~yllanp~~ 163 (168)
T 3rws_A 148 GFTKAVESFLLANPDY 163 (168)
T ss_dssp HHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhChHh
Confidence 9999999999887654
No 31
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=51.76 E-value=30 Score=31.45 Aligned_cols=117 Identities=10% Similarity=-0.082 Sum_probs=63.2
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEEE-
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAVL- 283 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~~- 283 (389)
...+.++|++.+|++|. | ... +..+|-.+..++....-+...-.+.+..|. +.+|-+.+=....+...
T Consensus 92 ~~~~v~~~~~~v~~~L~-D-~~~-------R~~WD~~~~~~~vle~id~~~ivY~~~~p~--~~~~v~~RDFV~lr~~r~ 160 (258)
T 3fo5_A 92 MEMVVHVDAAQAFLLLS-D-LRQ-------RPEWDKHYRSVELVQQVDEDDAIYHVTSPA--LGGHTKPQDFVILASRRK 160 (258)
T ss_dssp EEEEESSCHHHHHHHHH-C-GGG-------GGGTCTTCCEEEEEEEEETTEEEEEEEECC--CTTCSSCEEEEEEEEEEC
T ss_pred EEEEEeCCHHHHHHHHh-C-chh-------HhHhhhhccEEEEEEEcCCCeEEEEEecCC--ccCCCCCCEEEEEEEEEe
Confidence 45678999999999998 3 211 222232222222211001111122233332 11343444233333332
Q ss_pred -cCCCC-eEEEEEEeecCCCCCCCe----EEEEEEEEEEecCCCceEEEEEEeEE
Q 016456 284 -SPDKK-IFVFETVQQAHDVPFGSY----FEIHCRWHLETISENSSTIDIKVGAH 332 (389)
Q Consensus 284 -~~d~~-~~vv~~~~~~~dVPygd~----F~v~~r~~it~~~~~~c~l~V~~~V~ 332 (389)
..++. +++...+...+++|=..- ....+.|+|.+.+++.|+|....++.
T Consensus 161 ~~~~G~~yvi~~~SV~hp~~Pp~~g~VR~~~~~sg~~I~P~~~~~t~VtY~~q~d 215 (258)
T 3fo5_A 161 PCDNGDPYVIALRSVTLPTHRETPEYRRGETLCSGFCLWREGDQLTKVSYYNQAT 215 (258)
T ss_dssp CSSTTCCEEEEEEEEECTTSCCCTTSEECCCSSEEEEEEEEETTEEEEEEEESCC
T ss_pred ccCCCCEEEEEEEeccCCCCCCCCCCEEEEEcCcEEEEEECCCCCEEEEEEEeeC
Confidence 23454 555556666678885543 45668999999999999988877765
No 32
>2gcl_A Hypothetical 63.0 kDa protein in DAK1-ORC1 intergenic region; chromaint, double PH domain, yfact, DNA replication, RPA; 2.21A {Saccharomyces cerevisiae} SCOP: b.55.1.10 PDB: 2gcj_A
Probab=49.40 E-value=42 Score=30.62 Aligned_cols=72 Identities=19% Similarity=0.331 Sum_probs=46.4
Q ss_pred cceEEEeecCeeeEEeccCCceeEEEEecccceeeeecc-ccc--ccC--cEEEEEecCCCCCCCCCCCCCCCceEEEEe
Q 016456 56 YHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQ-HAF--INP--AITIILRMGAGGHGVPPLGSPDGRVRYKFA 130 (389)
Q Consensus 56 ~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~-~~~--~~~--~i~I~~~~g~~~~~~~~~~~~~g~~~~~f~ 130 (389)
-.|-||.-++.|-|- .+-.+.|+++||.+|+-.. +.. ... .+.|.++. |...|.|+
T Consensus 174 ~eG~LypL~~gflF~-----~KP~~~i~~~~I~sV~fsrvg~~~~~~rTFdl~v~~k~--------------g~~~~~Fs 234 (261)
T 2gcl_A 174 NEGYLYPLDNAFFFL-----TKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRS--------------NRGSTTFA 234 (261)
T ss_dssp EEEEEEECSSEEEEE-----SSSCEEEEGGGEEEEEEEC--------CEEEEEEEEST--------------TCCEEEEE
T ss_pred CceEEEEecCceEEe-----eCCcEEEEhhHeeEEEEEeccCCcccCceEEEEEEEcC--------------CCccEEEc
Confidence 349999999988883 4567889999999999775 211 111 46677653 33478997
Q ss_pred eecchHHHHHHHHHHHHH
Q 016456 131 SFWNRNHALRQLQRIAKN 148 (389)
Q Consensus 131 sf~~rd~~~~~l~~~~~~ 148 (389)
+. +|++ |..|...++.
T Consensus 235 ~I-dreE-~~~L~~ylk~ 250 (261)
T 2gcl_A 235 NI-SKEE-QQLLEQFLKS 250 (261)
T ss_dssp EE-EGGG-HHHHHHHHHH
T ss_pred cc-CHHH-HHHHHHHHHH
Confidence 76 5554 4444444443
No 33
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=44.62 E-value=82 Score=24.06 Aligned_cols=57 Identities=9% Similarity=0.153 Sum_probs=32.8
Q ss_pred EEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHHHHHHHhhhhc
Q 016456 310 HCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELMLETARSYIKT 368 (389)
Q Consensus 310 ~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~l~~~~k~v~~ 368 (389)
...|.+++.+++ |+|......++.. .++..++..-...-..+.++.+++.+++.+.+
T Consensus 88 ~~~~~~~~~~~g-T~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 88 EGTWVFLPEGEG-TRVVLTLTYELTI-PIFGGLLRKLVQKLMQENVESLLKGLEERVLA 144 (147)
T ss_dssp EEEEEEEECSSS-EEEEEEEEEECCC-TTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEECCCC-cEEEEEEEEecCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567888887765 8888777766543 24444443322233344455666666555544
No 34
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=39.08 E-value=62 Score=25.75 Aligned_cols=35 Identities=9% Similarity=0.357 Sum_probs=24.2
Q ss_pred EEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhh
Q 016456 309 IHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKT 345 (389)
Q Consensus 309 v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~ 345 (389)
...+|.|++.+++ |+|.....++|. +.++..++..
T Consensus 91 ~~g~w~f~~~~~g-t~v~~~~~~~~~-~~l~~~l~~~ 125 (148)
T 1t17_A 91 LNNGWRFMPEGDA-TRVEFVIEFAFK-SALLDAMLAA 125 (148)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEECCS-CHHHHHHHHH
T ss_pred cEEEEEEEECCCC-eEEEEEEEEEEC-cHHHHHHHHH
Confidence 5889999998776 888877777764 3344444443
No 35
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=39.03 E-value=74 Score=24.43 Aligned_cols=48 Identities=4% Similarity=0.067 Sum_probs=33.3
Q ss_pred EEEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEE
Q 016456 59 RMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIIL 106 (389)
Q Consensus 59 rlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~ 106 (389)
.+.|..+.|+||.+--....+-.|+|.++..|+......-.+.+.|.+
T Consensus 38 ~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~ 85 (126)
T 1fao_A 38 WFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDYSQERVNCFCLVF 85 (126)
T ss_dssp EEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEECSSSSSSEEEEEE
T ss_pred EEEEECCEEEEeCCCCCCCceeEEEccceEEEEecccCCCCCEEEEEe
Confidence 355678889999765555667789999998887654332235788876
No 36
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=39.02 E-value=1.4e+02 Score=23.53 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=39.7
Q ss_pred EEeeeeeccccceEEEeecC----eeeEEeccCCceeEEEEecccceeeeecccccccC--cEEEEEe
Q 016456 46 YSCALERSFLYHGRMYVSAW----HICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINP--AITIILR 107 (389)
Q Consensus 46 f~C~l~~~~~~~Grlyit~~----~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~--~i~I~~~ 107 (389)
-.|.+.+ ..|.|.|+++ .|-.-+ +-| ...+.|++..|..++..+... + .|+|..+
T Consensus 5 gaa~yKK---k~G~lti~eD~~p~~l~W~p-~~g-~~~isI~l~~It~LQqTp~ts--~KvmLKI~~k 65 (115)
T 1y5o_A 5 GAAIFEK---VSGIIAINEDVSPAELTWRS-TDG-DKVHTVVLSTIDKLQATPASS--EKMMLRLIGK 65 (115)
T ss_dssp EEEESSS---CEEEEEEECSSSSCEEEEEE-SSS-SCEEEEESTTCSEEEECCTTC--SSEEEEEEEC
T ss_pred ceeEEEe---cccEEEEccCCCcceEEEEE-CCC-CccEEEEhhhhhhhhcCCCCC--CceEEEEEEe
Confidence 3456655 4599999999 666666 556 455999999999999887653 2 4666654
No 37
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=38.98 E-value=47 Score=29.77 Aligned_cols=58 Identities=22% Similarity=0.378 Sum_probs=41.0
Q ss_pred cceEEEeecCeeeEEeccCC-ceeEEEEecccceeeeecccccccCcEEEEEecCCCCCCCCCCCCCCCceEEEEeeec
Q 016456 56 YHGRMYVSAWHICFHSNVFS-KQMKVIIPIGDIDEIRRSQHAFINPAITIILRMGAGGHGVPPLGSPDGRVRYKFASFW 133 (389)
Q Consensus 56 ~~Grlyit~~~lcFys~~~g-~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~~~g~~~~~~~~~~~~~g~~~~~f~sf~ 133 (389)
..|.||.-+++|-| | .+-.+.|+++||.+|.-.......=.+.|.++. | ..|.|++.-
T Consensus 165 keG~LyfL~~~ilF-----gf~KP~l~i~~~dI~svs~Srv~~RTFdl~v~~k~--------------g-~e~eFsmID 223 (237)
T 3fss_A 165 KEGTLYFLPDHIIF-----GFKKPILLLDASDIESITYSSITRLTFNASLVTKD--------------G-EKYEFSMID 223 (237)
T ss_dssp SEEEEEECSSEEEE-----ESSSSCEEEEGGGEEEEEEESCCSSEEEEEEEETT--------------S-CEEEEEEEE
T ss_pred CCeEEEEecCceEE-----ecCCCeEEEEehhEEEEEEEeccCcEEEEEEEECC--------------C-CeEEEeecC
Confidence 45999999999887 4 245578999999999988754322256666642 3 367887664
No 38
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=37.71 E-value=1.5e+02 Score=23.34 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=70.2
Q ss_pred ccccceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEE
Q 016456 202 VGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHA 281 (389)
Q Consensus 202 ~~v~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~ 281 (389)
....+.+++.|++.+|.++ .| ...+.+++- + + ..+.. . ++. +.+.... .+||-.......-++
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l-~D-~~~~~~w~p--~---~--~~~~~-~--~~~---~~~~~~~--~~g~~~~~~~~~~~~ 76 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFL-TD-PKRFSRAFP--G---F--KSVEV-E--DGS---FTIELRL--SLGPLRGDARVRASF 76 (157)
T ss_dssp EEEEEEEESSCHHHHHHHH-TC-HHHHGGGST--T---E--EEEEE-E--TTE---EEEEEEE--ESSSSEEEEEEEEEE
T ss_pred EEeeEEEEcCCHHHHHHHH-cC-HHHHHhhCC--C---c--eEEEE-C--CCE---EEEEEEE--EEcceeEEEEEEEEE
Confidence 4555678999999999975 43 222222321 1 1 12221 1 221 2233221 244433222222233
Q ss_pred E-EcCCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeee--ccchhhhhhchHHHHHHHHHHH
Q 016456 282 V-LSPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKW--CVMQSKIKTGAVNEYKKEVELM 358 (389)
Q Consensus 282 ~-~~~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~--t~~K~~Ie~~~~~~~k~~~~~~ 358 (389)
. ..++ ..+.+..... + ....|.....|.++..+ +.|+|.....+++... .++..++.+.+ +..++.+
T Consensus 77 ~~~~~~-~~i~~~~~~~--~--~~~~~~~~~~~~l~~~~-~gT~v~~~~~~~~~g~l~~~~~~~~~~~~----~~~~~~~ 146 (157)
T 2ns9_A 77 EDLEKP-SKATVKGSGR--G--AGSTLDFTLRFAVEPSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLA----RRMINDV 146 (157)
T ss_dssp EEEETT-TEEEEEEEEE--C--SSEEEEEEEEEEEEEET-TEEEEEEEEEEEEEEGGGGSCHHHHHHHH----HHHHHHH
T ss_pred EecCCC-cEEEEEEEec--C--CCccEEEEEEEEEEeCC-CcEEEEEEEEEEECcCHHHhhHHHHHHHH----HHHHHHH
Confidence 2 2333 4565543221 1 12357778899999877 7899999988887652 23333333222 3345555
Q ss_pred HHHHHhhhh
Q 016456 359 LETARSYIK 367 (389)
Q Consensus 359 l~~~~k~v~ 367 (389)
++.+++.+.
T Consensus 147 ~~~lk~~~e 155 (157)
T 2ns9_A 147 ISGVKRELG 155 (157)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 555555553
No 39
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=29.51 E-value=1e+02 Score=23.08 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=31.5
Q ss_pred EEEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEE
Q 016456 59 RMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIIL 106 (389)
Q Consensus 59 rlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~ 106 (389)
-+.|+.+.|+||.+--....+-.|+|.++..|+... .+.+.|.+
T Consensus 29 ~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~----~~~F~i~~ 72 (115)
T 2cod_A 29 WVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG----DNKFEVVT 72 (115)
T ss_dssp EEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET----TTEEEEEE
T ss_pred EEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC----CCEEEEEe
Confidence 345667888888775544566789999998888764 24777775
No 40
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=29.51 E-value=1.6e+02 Score=21.71 Aligned_cols=47 Identities=2% Similarity=-0.118 Sum_probs=30.7
Q ss_pred EEeecCeeeEEeccCCceeEEEEecccceeeeecccccccCcEEEEE
Q 016456 60 MYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFINPAITIIL 106 (389)
Q Consensus 60 lyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~~~~i~I~~ 106 (389)
+-|..+.|+||.+--....+-.|+|.++..+.......-.+.+.|.+
T Consensus 29 fvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~ 75 (109)
T 1wgq_A 29 FVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDENSESKVFQLLH 75 (109)
T ss_dssp EEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCSSCSSSEEEEEE
T ss_pred EEEeCCEEEEECCCCcCccCceEECCCCEEEECCCCCCCCcEEEEEe
Confidence 44567888888765444556788999888776553322234777776
No 41
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=28.47 E-value=72 Score=25.09 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=33.3
Q ss_pred cceEEEeecCeeeEEeccCCceeEEEEecccceeeeec
Q 016456 56 YHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRS 93 (389)
Q Consensus 56 ~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~ 93 (389)
--+-|.+++..|.|....-|....+.||+.-|..|-..
T Consensus 58 Av~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyAr 95 (111)
T 1ou8_A 58 ATGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAR 95 (111)
T ss_dssp TCEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEET
T ss_pred hhcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeee
Confidence 34889999999999999999899999999999888644
No 42
>1yfn_A Stringent starvation protein B; protein-peptide complex, SSPB, RSEA, protein binding; 1.80A {Escherichia coli} SCOP: b.136.1.1 PDB: 1ox9_A 1ox8_A
Probab=27.84 E-value=74 Score=25.32 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=33.3
Q ss_pred cceEEEeecCeeeEEeccCCceeEEEEecccceeeeec
Q 016456 56 YHGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRS 93 (389)
Q Consensus 56 ~~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~ 93 (389)
--+-|.+++..|.|....-|....+.+|+.-|..|-..
T Consensus 59 Av~~L~i~nd~IsF~ARFgGv~~~i~VP~~AV~aIyAr 96 (118)
T 1yfn_A 59 AVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYAR 96 (118)
T ss_dssp GCEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEET
T ss_pred hhcCeEEeccEEEEEEEECCEeEEEEEehHhheEeeee
Confidence 35889999999999999999899999999999888653
No 43
>1ou9_A Stringent starvation protein B homolog; SSRA peptide-binding protein, homodimer, transport protein; 1.80A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1oul_A 1zsz_C
Probab=26.53 E-value=79 Score=25.51 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=32.5
Q ss_pred ceEEEeecCeeeEEeccCCceeEEEEecccceeeeec
Q 016456 57 HGRMYVSAWHICFHSNVFSKQMKVIIPIGDIDEIRRS 93 (389)
Q Consensus 57 ~Grlyit~~~lcFys~~~g~~~~~~i~~~dI~~I~k~ 93 (389)
-+-|.+++..|.|....-|....+.||+.-|..|-..
T Consensus 59 v~~L~i~nd~IsF~ARFgGv~~~I~VP~~AV~aIyAr 95 (129)
T 1ou9_A 59 TGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYAR 95 (129)
T ss_dssp CEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEET
T ss_pred hcCeEEeccEEEEEEEECCEeEEEEEehHheeEeeec
Confidence 4889999999999999999889999999888877544
No 44
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=24.32 E-value=2.9e+02 Score=22.46 Aligned_cols=47 Identities=9% Similarity=0.313 Sum_probs=30.4
Q ss_pred EcCCCCeEEEEEEeecCCCCCCCeEE-EEEEEEEEecCCCceEEEEEEeEEEee
Q 016456 283 LSPDKKIFVFETVQQAHDVPFGSYFE-IHCRWHLETISENSSTIDIKVGAHFKK 335 (389)
Q Consensus 283 ~~~d~~~~vv~~~~~~~dVPygd~F~-v~~r~~it~~~~~~c~l~V~~~V~f~K 335 (389)
..+++..+...... .+ ..|. ...+|.+.+.+++.|+|.....++|..
T Consensus 71 ~~~~~~~i~~~~~~--~~----gpf~~~~g~w~f~~~~~~~t~V~~~~~~~~~~ 118 (172)
T 3tfz_A 71 LDPARRVIAYRQLE--TA----PIVGHMSGEWRAFTLDAERTQLVLTHDFVTRA 118 (172)
T ss_dssp EETTTTEEEEEEEE--CC----TTEEEEEEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EeCCCCEEEEEEee--CC----CChhhcEEEEEEEECCCCcEEEEEEEEEEEcC
Confidence 44444556665442 11 2453 456999998877889988888777754
No 45
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=23.85 E-value=1.6e+02 Score=23.63 Aligned_cols=105 Identities=10% Similarity=0.038 Sum_probs=51.3
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEEEc
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAVLS 284 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~~~ 284 (389)
-..+++.|++++|.+ +.|-. -+.+|+-. ...+.. .. ++ ...++..+ +.|+..-. .........
T Consensus 8 ~s~~I~ap~e~V~~~-~~D~e-~~p~w~p~--~~~v~~-----~~--~~---~~~~~~~~--~~G~~~~~-~~~~v~e~~ 70 (155)
T 3ggn_A 8 DAVTIGKPAEQLYAV-WRDLP-GLPLLMTH--LRSVEV-----LD--DK---RSRWTVEA--PAPLGTVS-WEAELTADE 70 (155)
T ss_dssp EEEEESSCHHHHHHH-HHCGG-GHHHHSTT--CCEEEE-----CS--SS---EEEEEEEC--CTTTCEEE-EEEEEEEEE
T ss_pred EEEEEcCCHHHHHHH-HhCHH-HhHHHhhh--ceEEEE-----ec--CC---eeEEEEEe--cCCcceEE-EEEEEEEec
Confidence 345789999999996 55433 34445322 222211 11 12 12334332 23422211 112222222
Q ss_pred CCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEec-CCCceEEEEEEeEEEe
Q 016456 285 PDKKIFVFETVQQAHDVPFGSYFEIHCRWHLETI-SENSSTIDIKVGAHFK 334 (389)
Q Consensus 285 ~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~~-~~~~c~l~V~~~V~f~ 334 (389)
+ +..+..... +=| ......+|.|... +++.|+|.+....++.
T Consensus 71 p-~~~i~~~~~----~g~---~~~~~g~~~F~~~~~~~gT~V~~~~~~~~~ 113 (155)
T 3ggn_A 71 P-GKRIAWRSL----PGA---RIENSGEVLFRPAPGARGTEVVVRLTYRPP 113 (155)
T ss_dssp T-TTEEEEEEC----TTC---SSCEEEEEEEEECSSSSCEEEEEEEEEC--
T ss_pred C-CCEEEEEEC----CCC---CcceEEEEEEEECCCCCceEEEEEEEEECC
Confidence 3 345655432 122 2346778889888 4678998888777664
No 46
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.46 E-value=83 Score=25.31 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=30.9
Q ss_pred eecCeeeEEeccCCceeEEEEecccceeeeecccccc-----c-CcEEEEE
Q 016456 62 VSAWHICFHSNVFSKQMKVIIPIGDIDEIRRSQHAFI-----N-PAITIIL 106 (389)
Q Consensus 62 it~~~lcFys~~~g~~~~~~i~~~dI~~I~k~~~~~~-----~-~~i~I~~ 106 (389)
+..+-|+.|-+--+.+....|||.||..|+..+...+ . +.++|.|
T Consensus 31 LD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T 81 (125)
T 2coa_A 31 LDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVT 81 (125)
T ss_dssp ECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEEC
T ss_pred ecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEe
Confidence 3445556665555666777899999999998865532 1 3578876
No 47
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=21.25 E-value=3.1e+02 Score=21.77 Aligned_cols=101 Identities=10% Similarity=0.134 Sum_probs=53.3
Q ss_pred cceEeecCHHHHHhHhcCCCCchHHHHHHHcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEEEE-E
Q 016456 205 YNDVFPCTAEQFFTLLFSDDSTFTNEYRAARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQHAV-L 283 (389)
Q Consensus 205 ~~~~~~~s~~~lf~llF~d~s~f~~~~~~~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~~~-~ 283 (389)
.+.++++|++.+|.+ ++|-..+ .+++-.. ....+.. |+..|.++|. -| . ...+++. .
T Consensus 6 ~si~I~Ap~~~VW~~-l~d~~~~-~~w~p~v-----~~~~~~~----GG~vR~~~~~------~G---~--~~~Erl~~~ 63 (146)
T 3f08_A 6 TSMEIFGSTEQVWQL-IGGFNSL-PDWLPYI-----PSSKLTE----GGRVRHLANP------DG---E--TIIERLEVF 63 (146)
T ss_dssp EEEEESSCHHHHHHH-HCSTTCH-HHHCTTC-----CEEEEEG----GGTEEEEECT------TS---C--EEEEEEEEE
T ss_pred EEEEEeCCHHHHHHH-HhccccH-HHhCCCe-----EEEEEeC----CCeEEEEEeC------CC---C--EEEEEEEEE
Confidence 356789999999996 6654433 3443221 1112221 2567876541 12 1 2333443 4
Q ss_pred cCCCCeEEEEEEeecCCCCCCCeEEEEEEEEEEe-cCCCceEEEEEEeEE
Q 016456 284 SPDKKIFVFETVQQAHDVPFGSYFEIHCRWHLET-ISENSSTIDIKVGAH 332 (389)
Q Consensus 284 ~~d~~~~vv~~~~~~~dVPygd~F~v~~r~~it~-~~~~~c~l~V~~~V~ 332 (389)
.+++..|...... .+.|+. .....|.+.+ .++++|+|.-.+.+.
T Consensus 64 D~~~~~~~y~iv~--g~~~~~---~~~~~~~v~p~~~~~gt~v~w~~~~~ 108 (146)
T 3f08_A 64 NDKERYYTYSIMN--APFPVT---NYLSTIQVKEGTESNTSLVEWSGTFT 108 (146)
T ss_dssp ETTTTEEEEEEEE--CSSSEE---EEEEEEEEEECSSTTCEEEEEEEEEE
T ss_pred eCCCCEEEEEEec--CCCcee---EEEEEEEEEEecCCCcEEEEEEEEEE
Confidence 4444554443332 246642 2344566777 467788887776665
No 48
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=20.10 E-value=3.7e+02 Score=22.18 Aligned_cols=149 Identities=12% Similarity=0.102 Sum_probs=76.9
Q ss_pred ccccceEeecCHHHHHhHhcCCCCchHHHHHH-HcCCcceEecccccCCCCCCeEEEEEEEEecCCCCCCCceeEeEEEE
Q 016456 202 VGIYNDVFPCTAEQFFTLLFSDDSTFTNEYRA-ARKDTNLVMGQWHAADEYDGQVREITFRSLCNSPMCPPDTAMTEYQH 280 (389)
Q Consensus 202 ~~v~~~~~~~s~~~lf~llF~d~s~f~~~~~~-~~~~~di~~~~W~~~~~~~~~~R~ity~~~l~~~lgpk~t~~~e~Q~ 280 (389)
+...+.+.++|++.+|.++..|-.....+.+- .....++.-+.. ..+..|.++|.. -|| .. ..+++
T Consensus 11 ~~~~ev~i~a~a~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg-----~~Gsir~~~~~~-----g~~-~~--~~kEr 77 (165)
T 3ie5_A 11 TIVKEEESPIAPHRLFKALVLERHQVLVKAQPHVFKSGEIIEGDG-----GVGTVTKITFVD-----GHP-LT--YMLHK 77 (165)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSS-----STTCEEEEEECT-----TSS-CC--EEEEE
T ss_pred EEEEEEEecCCHHHHHHHhcCCccccchhhCCcccceEEEecCCC-----CCCeEEEEEecC-----CCC-Cc--eEEEE
Confidence 34556688999999999976643222233321 122222222321 136789998842 122 21 34445
Q ss_pred EE-EcCCCCeEEEEEEee-cCCCCCCCeEEEEEEEEEEecCCCceEEEEEEeEEEeeeccchhhhhhchHHHHHHHHHHH
Q 016456 281 AV-LSPDKKIFVFETVQQ-AHDVPFGSYFEIHCRWHLETISENSSTIDIKVGAHFKKWCVMQSKIKTGAVNEYKKEVELM 358 (389)
Q Consensus 281 ~~-~~~d~~~~vv~~~~~-~~dVPygd~F~v~~r~~it~~~~~~c~l~V~~~V~f~K~t~~K~~Ie~~~~~~~k~~~~~~ 358 (389)
+. +..++..|.....-- ...-+| .+|....+.. .++++|.+...+ +|.+.. -..+.-..++..++....+
T Consensus 78 l~~iD~~~~~~~Y~iieG~~l~~~~-~~y~~~i~v~---~~~ggs~vkwt~--~y~~~~--~~~~~~e~~k~~~~~~~~~ 149 (165)
T 3ie5_A 78 FDEIDAANFYCKYTLFEGDVLRDNI-EKVVYEVKLE---AVGGGSKGKITV--TYHPKP--GCTVNEEEVKIGEKKAYEF 149 (165)
T ss_dssp EEEEEGGGTEEEEEEEEEGGGTTTE-EEEEEEEEEE---EETTEEEEEEEE--EEEECT--TCCCCHHHHHHHHHHHHHH
T ss_pred EEEEchhcCEEEEEEecCCCCccce-EEEEEEEEEE---eCCCceEEEEEE--EEEECC--CCCCCHHHHHHHHHHHHHH
Confidence 54 333444333322211 111123 3555555554 345677655444 555421 1122233444567888889
Q ss_pred HHHHHhhhhcCCC
Q 016456 359 LETARSYIKTRTS 371 (389)
Q Consensus 359 l~~~~k~v~~~~~ 371 (389)
++.++.++.+|..
T Consensus 150 ~K~ie~yllanp~ 162 (165)
T 3ie5_A 150 YKQVEEYLAANPE 162 (165)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHhChh
Confidence 9999999988764
Done!