Your job contains 1 sequence.
>016457
MEMEAEESQSQPKSQSCDNVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTN
VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV
TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQ
NKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLS
IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPV
NYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD
SSEINRSWISNAMVMRSPKTHKKNRHNPY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016457
(389 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043393 - symbol:AT2G47790 "AT2G47790" species... 1426 5.7e-146 1
DICTYBASE|DDB_G0283635 - symbol:wdr89 "WD40 repeat-contai... 411 2.1e-38 1
MGI|MGI:1919588 - symbol:Wdr89 "WD repeat domain 89" spec... 295 4.0e-26 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 209 8.3e-15 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 206 1.9e-14 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 206 1.9e-14 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 206 1.9e-14 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 206 1.9e-14 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 202 6.0e-14 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 196 1.9e-13 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 192 1.3e-12 1
ASPGD|ASPL0000056340 - symbol:AN0806 species:162425 "Emer... 179 1.4e-12 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 186 4.8e-12 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 177 5.1e-11 1
CGD|CAL0002419 - symbol:orf19.2527 species:5476 "Candida ... 180 9.6e-11 2
UNIPROTKB|Q5A9D8 - symbol:CaO19.10062 "Putative uncharact... 180 9.6e-11 2
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 169 4.5e-10 1
SGD|S000004980 - symbol:YNL035C "Protein of unknown funct... 170 5.3e-10 1
POMBASE|SPCC63.06 - symbol:SPCC63.06 "human WDR89 family ... 167 7.5e-10 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 160 8.8e-09 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 160 8.8e-09 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 159 1.1e-08 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 159 1.1e-08 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 137 1.4e-08 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 159 1.4e-08 1
UNIPROTKB|G4N754 - symbol:MGG_03611 "Uncharacterized prot... 155 1.9e-08 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 156 2.5e-08 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 155 3.0e-08 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 155 3.0e-08 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 155 3.2e-08 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 155 3.2e-08 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 155 3.2e-08 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 155 3.2e-08 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 155 3.2e-08 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 133 3.7e-08 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 155 3.8e-08 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 155 3.8e-08 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 154 4.1e-08 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 154 4.1e-08 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 153 4.5e-08 1
UNIPROTKB|Q9W7K9 - symbol:SWiP-1 "SOCS box-containing WD ... 141 5.0e-08 2
ZFIN|ZDB-GENE-030131-1946 - symbol:wsb1 "WD repeat and SO... 153 5.3e-08 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 153 5.3e-08 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 153 5.3e-08 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 153 5.3e-08 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 153 5.3e-08 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 153 5.3e-08 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 153 5.3e-08 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 152 7.5e-08 1
RGD|1304773 - symbol:Rfwd2 "ring finger and WD repeat dom... 151 9.3e-08 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 150 1.1e-07 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 150 1.1e-07 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 150 1.1e-07 1
CGD|CAL0000105 - symbol:orf19.1672 species:5476 "Candida ... 156 1.2e-07 1
ZFIN|ZDB-GENE-070410-134 - symbol:rfwd2 "ring finger and ... 153 1.2e-07 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 148 1.3e-07 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 155 1.7e-07 1
UNIPROTKB|H0Y339 - symbol:RFWD2 "E3 ubiquitin-protein lig... 150 1.9e-07 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 148 2.0e-07 1
MGI|MGI:1347046 - symbol:Rfwd2 "ring finger and WD repeat... 151 2.1e-07 1
CGD|CAL0005013 - symbol:SWD3 species:5476 "Candida albica... 146 2.6e-07 1
UNIPROTKB|F1NQ64 - symbol:RFWD2 "Uncharacterized protein"... 150 2.7e-07 1
UNIPROTKB|Q8NHY2 - symbol:RFWD2 "E3 ubiquitin-protein lig... 150 2.7e-07 1
UNIPROTKB|E2RRJ5 - symbol:RFWD2 "Uncharacterized protein"... 150 2.8e-07 1
UNIPROTKB|F1MHX1 - symbol:RFWD2 "Uncharacterized protein"... 150 2.8e-07 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 146 3.1e-07 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 146 3.3e-07 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 144 3.8e-07 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 143 4.3e-07 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 143 4.9e-07 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 143 5.0e-07 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 143 5.0e-07 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 143 5.0e-07 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 143 5.0e-07 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 143 5.8e-07 1
UNIPROTKB|F1RKG5 - symbol:WSB2 "Uncharacterized protein" ... 143 6.4e-07 1
UNIPROTKB|Q0V8J1 - symbol:WSB2 "WD repeat and SOCS box-co... 143 6.4e-07 1
UNIPROTKB|F1P6A3 - symbol:WSB2 "Uncharacterized protein" ... 143 6.4e-07 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 143 6.5e-07 1
UNIPROTKB|E1BY92 - symbol:WSB1 "Uncharacterized protein" ... 141 6.6e-07 2
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 149 6.7e-07 1
UNIPROTKB|F1RJ54 - symbol:WSB1 "Uncharacterized protein" ... 143 6.9e-07 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 144 7.0e-07 1
UNIPROTKB|Q9NYS7 - symbol:WSB2 "WD repeat and SOCS box-co... 142 8.2e-07 1
UNIPROTKB|F5H280 - symbol:WSB2 "WD repeat and SOCS box-co... 142 8.3e-07 1
UNIPROTKB|B4DIE6 - symbol:WSB2 "cDNA FLJ59692, highly sim... 142 8.9e-07 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 142 9.2e-07 1
SGD|S000002535 - symbol:MTC5 "Subunit of the SEA (Seh1-as... 147 1.0e-06 1
MGI|MGI:2144041 - symbol:Wsb2 "WD repeat and SOCS box-con... 141 1.1e-06 1
RGD|1359599 - symbol:Wsb2 "WD repeat and SOCS box-contain... 141 1.1e-06 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 149 1.1e-06 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 141 1.2e-06 1
UNIPROTKB|E2RFV0 - symbol:WSB1 "Uncharacterized protein" ... 140 1.5e-06 1
UNIPROTKB|Q9Y6I7 - symbol:WSB1 "WD repeat and SOCS box-co... 140 1.5e-06 1
MGI|MGI:1289332 - symbol:Tssc1 "tumor suppressing subtran... 139 1.6e-06 1
WARNING: Descriptions of 175 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2043393 [details] [associations]
symbol:AT2G47790 "AT2G47790" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0051604 "protein maturation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AC005309 eggNOG:NOG285804 UniGene:At.48607
UniGene:At.70188 EMBL:AF424569 EMBL:BT000571 IPI:IPI00526948
PIR:E84919 RefSeq:NP_566111.1 HSSP:P11494 ProteinModelPortal:Q944S2
SMR:Q944S2 STRING:Q944S2 PaxDb:Q944S2 PRIDE:Q944S2
EnsemblPlants:AT2G47790.1 GeneID:819391 KEGG:ath:AT2G47790
TAIR:At2g47790 HOGENOM:HOG000029484 InParanoid:Q944S2 OMA:CLTHIET
PhylomeDB:Q944S2 ProtClustDB:CLSN2688991 ArrayExpress:Q944S2
Genevestigator:Q944S2 Uniprot:Q944S2
Length = 392
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 271/392 (69%), Positives = 311/392 (79%)
Query: 2 EMEAEESQSQPKSQSCDNVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNV 61
EME E Q++ S S N +K+FGLKNSIQTNFG DYVF+IVPK DW+ +AVSLSTN
Sbjct: 7 EMEVEV-QNRQLSDSSPAQN-VKKFGLKNSIQTNFGSDYVFQIVPKIDWTAIAVSLSTNT 64
Query: 62 VKLYSPVTGQYSGECKGHSSTVNQISFSGPS--TPHVLHSCSSDGTIRAWDTRSFHEVWS 119
VKLYSPVTGQY GECKGHS TVNQI+FS S +PHVLHSCSSDGTIR+WDTRSF +V
Sbjct: 65 VKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSR 124
Query: 120 VTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN 178
+ G+ QEIF FS+GG+ D LLA GC Q+ WDWRN KQVACLEESH++DVTQVHFVPN
Sbjct: 125 IDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPN 184
Query: 179 NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIET 238
NK++SASVDGLIC F+T GDINDDD LESVINVGTS+GK+GF G+ K LWCLTHIET
Sbjct: 185 KPNKLLSASVDGLICLFNTEGDINDDDHLESVINVGTSIGKIGFLGDGYKKLWCLTHIET 244
Query: 239 LSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYF 298
LSIW+W+DG + E AR LASDSWT D+VDYFVDCH PG GE+LWVIGGT AGTVGYF
Sbjct: 245 LSIWNWEDGSCEVNLEKARELASDSWTQDNVDYFVDCHCPG-GEDLWVIGGTCAGTVGYF 303
Query: 299 PVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLS 358
PVNY +IG EA+L GGH VVRSVL MP G A G+FGWTGGEDGRLCCW S
Sbjct: 304 PVNYKQPGSIGTAEAILGGGHIDVVRSVLQMPGEYGGAA---GLFGWTGGEDGRLCCWKS 360
Query: 359 D-DSSEINRSWISNAMVMRSPKTHKKNRHNPY 389
D D++EINRSW S+ +V++ P+ KKNRH+PY
Sbjct: 361 DEDATEINRSWTSSELVVKPPRNRKKNRHSPY 392
>DICTYBASE|DDB_G0283635 [details] [associations]
symbol:wdr89 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0283635 EMBL:AAFI02000056 GenomeReviews:CM000153_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 RefSeq:XP_638928.1
ProteinModelPortal:Q54QU5 STRING:Q54QU5 EnsemblProtists:DDB0267166
GeneID:8624167 KEGG:ddi:DDB_G0283635 OMA:INAEDSI Uniprot:Q54QU5
Length = 359
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 126/383 (32%), Positives = 182/383 (47%)
Query: 18 DNVNSIKRFGLKNSI---QTNFGDD--YVFEI-VPKNDWSLMAVSLSTNVVKLYSPVTGQ 71
D + S F NSI + GDD YV ++ V N L+A + S ++K+Y
Sbjct: 2 DQLISQLNFKSHNSIIHSVDSIGDDTCYVLDLSVTPN---LLAAAGSNYLIKIYDRSNNT 58
Query: 72 YSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ-EIFCF 130
GH +N+ F + L SCSSD T++ WDT++ S T Q EIF
Sbjct: 59 ILNVLSGHKDAINETKFI--ENTNTLLSCSSDKTVKIWDTKTGQ--CSQTINQQGEIFSI 114
Query: 131 SFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
G +LA G GS + ++ KK + + SH EDVT+V F P ++NK+VS SVDG
Sbjct: 115 DLNGD---ILAMGVGSMVVLYNLSTKKMIRKFDCSHTEDVTRVRFHPIDKNKLVSCSVDG 171
Query: 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNV 250
LIC +D +DDD + VIN S+G +GFFG ++L+ L+H E L+ WD G +
Sbjct: 172 LICMYDLE-QADDDDAIVHVINAEDSIGNIGFFGSAYQYLYTLSHTERLATWDLTTGLKI 230
Query: 251 ASF-ENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIG 309
+ + RS SD + + ++YF+ C Y L + GG GT F V I
Sbjct: 231 KHYGADLRSTLSDRYKFE-INYFISCIYDNASNQLILFGGDFNGTGHVFLVTPDEVIQIS 289
Query: 310 PPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS----EIN 365
E V HT V+R+V +S I T ED ++ W ++ S +IN
Sbjct: 290 KLENV----HTDVIRNVF------WDKFKSELI---TSSEDSKIGFWTNNPSITNILKIN 336
Query: 366 RSWISNAMV---MRSPKTHKKNR 385
SN M ++S KT N+
Sbjct: 337 NDTSSNKMKDDKLKSKKTSPYNK 359
>MGI|MGI:1919588 [details] [associations]
symbol:Wdr89 "WD repeat domain 89" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919588 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AK011125 EMBL:BC111903 EMBL:BC112430
IPI:IPI00132977 RefSeq:NP_082479.1 UniGene:Mm.341719
ProteinModelPortal:Q9D0R9 SMR:Q9D0R9 PhosphoSite:Q9D0R9
PaxDb:Q9D0R9 PRIDE:Q9D0R9 Ensembl:ENSMUST00000062370 GeneID:72338
KEGG:mmu:72338 UCSC:uc007nxj.2 CTD:112840 eggNOG:NOG285804
GeneTree:ENSGT00390000006996 HOGENOM:HOG000126822
HOVERGEN:HBG055747 InParanoid:Q9D0R9 OMA:IFISFDI OrthoDB:EOG4F1X3J
NextBio:336050 Bgee:Q9D0R9 Genevestigator:Q9D0R9 Uniprot:Q9D0R9
Length = 386
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 96/322 (29%), Positives = 142/322 (44%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111
L+AV S +++Y T E G ++ +SF+ S V +S S+DGT++ WD
Sbjct: 42 LVAVLCSNGSIRIYDKETLHLLREFGGSPGLLSGVSFAN-SCDSV-YSASTDGTVKCWDA 99
Query: 112 RSFHEV-WSVTAGSQEIFCFSFG-GSTDYLLAAGC-----GSQIQFWDWRNKKQ------ 158
R E + G SF D+++ AG + + FWD R Q
Sbjct: 100 RGASEKPVQLFKGYPSCSFISFDVNCKDHVICAGAEKVDEDALLVFWDARFTSQDLSTRD 159
Query: 159 -VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSV 217
+ E+H +D+TQV F P+N N VVS S DGL+ FD D ++D L + N +SV
Sbjct: 160 PLGAYSETHSDDITQVRFHPSNPNLVVSGSTDGLVNVFDLSAD-KEEDALVATCNSVSSV 218
Query: 218 GKVGFFGETNKHLWCLTHIETLSIWDWK--DGQNVASFENARSLASDSWTLDD-VDYFVD 274
+G+ G+ K ++C+TH E WD D + N + + + D +DY +
Sbjct: 219 SCIGWCGKDYKQIYCMTHDEGFCWWDLNHLDTDEPITCLNIQDVREITDVKDGHLDYLIG 278
Query: 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQG 334
Y + + L+VIGGT G + G + L GGH A VRS S
Sbjct: 279 GLYHEKMDRLFVIGGTNTGKIHLLSCTSAGLTHV----TSLHGGHAATVRSFCWNVSEDS 334
Query: 335 RPAQSHGIFGWTGGEDGRLCCW 356
TGGED +L W
Sbjct: 335 L---------LTGGEDAQLLLW 347
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 209 (78.6 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 59/254 (23%), Positives = 122/254 (48%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA ++QS P S + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 58/254 (22%), Positives = 120/254 (47%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA +Q P S + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 58/254 (22%), Positives = 120/254 (47%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA +Q P S + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 58/254 (22%), Positives = 120/254 (47%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA +Q P S + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 206 (77.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 58/254 (22%), Positives = 120/254 (47%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA +Q P S + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 202 (76.2 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 57/254 (22%), Positives = 120/254 (47%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-IK-RFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
E EA +Q P + + + + +K + LK ++ + + P +W +A S +
Sbjct: 9 ETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEW--LASSSAD 66
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
++K++ G++ GH ++ +++S S ++L S S D T++ WD S + +
Sbjct: 67 KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWDVSSGKCLKT 124
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
+ S +FC +F ++ +++ ++ WD + K + L +H + V+ VHF +
Sbjct: 125 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHF-NRD 182
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ +VS+S DGL +DT L+++I+ F K++ T TL
Sbjct: 183 GSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 238
Query: 240 SIWDWKDGQNVASF 253
+WD+ G+ + ++
Sbjct: 239 KLWDYSKGKCLKTY 252
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 196 (74.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 49/208 (23%), Positives = 101/208 (48%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P +W +A S + ++K++ G++ GH ++ +++S S ++L S S D T
Sbjct: 29 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKT 84
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
++ WD S + ++ S +FC +F ++ +++ ++ WD + K + L +
Sbjct: 85 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-A 143
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE 225
H + V+ VHF + + +VS+S DGL +DT L+++I+ F
Sbjct: 144 HSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSP 198
Query: 226 TNKHLWCLTHIETLSIWDWKDGQNVASF 253
K++ T TL +WD+ G+ + ++
Sbjct: 199 NGKYILAATLDNTLKLWDYSKGKCLKTY 226
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 48/208 (23%), Positives = 100/208 (48%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P +W +A S + ++K++ G++ GH ++ +++S S +L S S D T
Sbjct: 82 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--RLLVSGSDDKT 137
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
++ W+ + + ++ S +FC +F ++ +++ ++ WD R K + L +
Sbjct: 138 LKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP-A 196
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE 225
H + V+ VHF + + +VS+S DGL +DT L+++I+ F
Sbjct: 197 HSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASG----QCLKTLIDDDNPPVSFVKFSP 251
Query: 226 TNKHLWCLTHIETLSIWDWKDGQNVASF 253
K++ T TL +WD+ G+ + ++
Sbjct: 252 NGKYILAATLDNTLKLWDYSKGKCLKTY 279
>ASPGD|ASPL0000056340 [details] [associations]
symbol:AN0806 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 EMBL:AACD01000013
eggNOG:NOG285804 OrthoDB:EOG4KSSTQ HOGENOM:HOG000204857
RefSeq:XP_658410.1 ProteinModelPortal:Q5BF74
EnsemblFungi:CADANIAT00001855 GeneID:2876585 KEGG:ani:AN0806.2
OMA:PLNCEYI Uniprot:Q5BF74
Length = 360
Score = 179 (68.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 62/216 (28%), Positives = 106/216 (49%)
Query: 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG--HSSTVNQISFSGPSTPH 95
D Y++ IVP + A+S S + ++++ ++ H + ++ +
Sbjct: 17 DSYIYSIVPSSRTGFAAIS-SDDSLRIFDANELSHASLVASNVHDGVTSLRTYDASN--Q 73
Query: 96 VLHSCSSDGTIRAWDTRSFHE--VWSVTAGSQEIFCFSFGGSTDYLLAAGC---GSQ--I 148
++ + DG ++ WD R+ + V +V + +Q + S + AG Q +
Sbjct: 74 LVVTGGRDGKVKLWDLRNGKKSAVVAVQSSNQAPVLSTANCSETNSIVAGTELHSHQAIV 133
Query: 149 QFWDWRNKKQVACLE--ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD- 205
FWD R+ Q LE ESH +DVT++ + PN N ++S S DGL+ ++T I D+D
Sbjct: 134 AFWDVRSPNQPR-LEYVESHNDDVTELQYHPNRHNILLSGSTDGLVNIYNT--TITDEDE 190
Query: 206 LLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
L VIN G SV + GF E + ++ L+H ET SI
Sbjct: 191 ALVQVINHG-SVHRAGFINE--RTIYALSHDETFSI 223
Score = 52 (23.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/76 (30%), Positives = 33/76 (43%)
Query: 315 LVGGH-TAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSEINRSWISNAM 373
L GGH VVRS+ + Q+ +F T GEDG + W + E +
Sbjct: 296 LPGGHGEEVVRSI----HID---EQNQSVF--TCGEDGLVRAWKPE--GEQGQEAQMGTP 344
Query: 374 VMRSPKTHKKNRHNPY 389
+ KT +K R+ PY
Sbjct: 345 RHKEKKTKEKARYKPY 360
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 59/246 (23%), Positives = 110/246 (44%)
Query: 6 EESQSQPKSQSCDNVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLY 65
E+ Q QP Q +++ + LK +++ + + P W +A + + +K++
Sbjct: 18 EQQQQQP--QQTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKW--LASASADKTIKIW 73
Query: 66 SPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ 125
G++ +GH ++ I++S S ++ S S D TI+ WD S V ++ +
Sbjct: 74 GAYDGKFERTLEGHKEGISDIAWSQDSK--LICSASDDKTIKIWDVESGKMVKTLKGHKE 131
Query: 126 EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185
+F SF ++ +++ ++ WD N + + +H + VT VHF + VVS
Sbjct: 132 YVFGVSFNPQSNLIVSGSFDENVRIWDV-NTGECTKMISAHSDPVTGVHF-NRDGTLVVS 189
Query: 186 ASVDGLICTFDTGGDINDDDLLESVINVGTSVGK-VGF--FGETNKHLWCLTHIETLSIW 242
S DG + +DT LL ++ T GK V F F K + T TL +W
Sbjct: 190 GSYDGTVRIWDT----TTGQLLNTI---STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Query: 243 DWKDGQ 248
+ + +
Sbjct: 243 SYNNNK 248
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 8 SQSQPKSQSCDNVNSIKRFGLKNS--IQTNFGD-DYVFEIVPKNDWSLMAVSLSTNV-VK 63
SQ S + +IK + +++ ++T G +YVF V N S + VS S + V+
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFG-VSFNPQSNLIVSGSFDENVR 155
Query: 64 LYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV-TA 122
++ TG+ + HS V + F+ T ++ S S DGT+R WDT + + ++ T
Sbjct: 156 IWDVNTGECTKMISAHSDPVTGVHFNRDGT--LVVSGSYDGTVRIWDTTTGQLLNTISTE 213
Query: 123 GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
+E+ F + ++LA + ++ W + N K+ CL+
Sbjct: 214 DGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKK--CLK 252
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 177 (67.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 51/212 (24%), Positives = 99/212 (46%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK----GHSSTVNQISFSGPSTPHVLHSCS 101
P +W +A S + ++ ++ G Y G CK GHS ++ +++S S+ V S S
Sbjct: 49 PNGEW--LASSAADALIIIW----GAYDGNCKKTLYGHSLEISDVAWSSDSSRLV--SAS 100
Query: 102 SDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161
D T++ WD RS + ++ S +FC F ++ +++ ++ W+ + K +
Sbjct: 101 DDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKT 160
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVG 221
L +H + ++ V+F N + +VS S DGL +D L ++ + G
Sbjct: 161 LS-AHSDPISAVNFNCNG-SLIVSGSYDGLCRIWDAASG----QCLRTLADEGNPPVSFV 214
Query: 222 FFGETNKHLWCLTHIETLSIWDWKDGQNVASF 253
F K++ T TL +WD+ G+ + ++
Sbjct: 215 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
>CGD|CAL0002419 [details] [associations]
symbol:orf19.2527 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0044011
"single-species biofilm formation on inanimate substrate"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002419 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044011 EMBL:AACQ01000044
EMBL:AACQ01000043 eggNOG:NOG285804 RefSeq:XP_718195.1
RefSeq:XP_718294.1 ProteinModelPortal:Q5A9D8 GeneID:3640066
GeneID:3640136 KEGG:cal:CaO19.10062 KEGG:cal:CaO19.2527
Uniprot:Q5A9D8
Length = 428
Score = 180 (68.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 56/176 (31%), Positives = 83/176 (47%)
Query: 77 KGHSSTVNQI-SFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGS 135
K H S++N I S + SCSSDG I+ W+ RS + ++T + F S
Sbjct: 104 KAHESSINDIVKIDNDS----IASCSSDG-IKIWNLRSKSAIVTLTNAKKSNF-LSLAYK 157
Query: 136 TDYLLAA----GCGSQIQFWDWRNKKQVA-CLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
+ L A G +++ WD RN V +SH +D+T + F P N ++S S DG
Sbjct: 158 NNLLAAGTELVGVDAELHIWDIRNTDNVVRSFVDSHHDDITALEFHPTLTNYLMSGSTDG 217
Query: 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246
+ ++ + +D+ L VIN SV F T + LTH+ETL I D D
Sbjct: 218 YVNIYNLI-ETEEDEALHQVINFA-SVHSCHFI--TESRISILTHMETLMIHDLND 269
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 348 GEDGRLCCW 356
GEDGR+ W
Sbjct: 360 GEDGRIKLW 368
>UNIPROTKB|Q5A9D8 [details] [associations]
symbol:CaO19.10062 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002419 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044011 EMBL:AACQ01000044
EMBL:AACQ01000043 eggNOG:NOG285804 RefSeq:XP_718195.1
RefSeq:XP_718294.1 ProteinModelPortal:Q5A9D8 GeneID:3640066
GeneID:3640136 KEGG:cal:CaO19.10062 KEGG:cal:CaO19.2527
Uniprot:Q5A9D8
Length = 428
Score = 180 (68.4 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 56/176 (31%), Positives = 83/176 (47%)
Query: 77 KGHSSTVNQI-SFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGS 135
K H S++N I S + SCSSDG I+ W+ RS + ++T + F S
Sbjct: 104 KAHESSINDIVKIDNDS----IASCSSDG-IKIWNLRSKSAIVTLTNAKKSNF-LSLAYK 157
Query: 136 TDYLLAA----GCGSQIQFWDWRNKKQVA-CLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
+ L A G +++ WD RN V +SH +D+T + F P N ++S S DG
Sbjct: 158 NNLLAAGTELVGVDAELHIWDIRNTDNVVRSFVDSHHDDITALEFHPTLTNYLMSGSTDG 217
Query: 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246
+ ++ + +D+ L VIN SV F T + LTH+ETL I D D
Sbjct: 218 YVNIYNLI-ETEEDEALHQVINFA-SVHSCHFI--TESRISILTHMETLMIHDLND 269
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 348 GEDGRLCCW 356
GEDGR+ W
Sbjct: 360 GEDGRIKLW 368
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 169 (64.5 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107
ND +L+A + + L+S +GHSS ++ +++S S H S S D T+R
Sbjct: 53 NDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS--HYTCSASDDCTLR 110
Query: 108 AWDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
WD RS +E V G +FC +F ++ +++ I+ W+ + K V ++ +H
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK-AH 169
Query: 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226
++ VHF + + +VSAS DG C D + L+++I+ + F
Sbjct: 170 SMPISSVHF-NRDGSLIVSASHDGS-CKI---WDAKEGTCLKTLIDDKSPAVSFAKFSPN 224
Query: 227 NKHLWCLTHIETLSIWDWKDGQ 248
K + T TL + ++ G+
Sbjct: 225 GKFILVATLDSTLKLSNYATGK 246
>SGD|S000004980 [details] [associations]
symbol:YNL035C "Protein of unknown function" species:4932
"Saccharomyces cerevisiae" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004980 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006947 eggNOG:NOG285804
GeneTree:ENSGT00390000006996 OrthoDB:EOG4KSSTQ EMBL:Z71311
PIR:S62957 RefSeq:NP_014363.1 ProteinModelPortal:P53962 SMR:P53962
DIP:DIP-6372N IntAct:P53962 MINT:MINT-676672 STRING:P53962
PaxDb:P53962 PeptideAtlas:P53962 EnsemblFungi:YNL035C GeneID:855695
KEGG:sce:YNL035C CYGD:YNL035c HOGENOM:HOG000204857 OMA:AHESSIN
NextBio:980017 Genevestigator:P53962 GermOnline:YNL035C
Uniprot:P53962
Length = 389
Score = 170 (64.9 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 69/261 (26%), Positives = 122/261 (46%)
Query: 32 IQTN-FG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89
+++N FG +++ ++ P L+ LS ++L TG+ + K + +N +
Sbjct: 7 VESNSFGSENWCLKLQPSYKHGLLT-GLSNGEIRLLDWSTGKSVQKIKASETAINDMKVI 65
Query: 90 GP--STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ 147
G S H++ S S D ++ +D R+ + + + F S S LLA CG++
Sbjct: 66 GSDFSAGHLVSSASIDA-VKVFDIRTNDRIAQIQNEANSPF-ISLD-SRHGLLA--CGTE 120
Query: 148 IQ-------FWDWRN-KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGG 199
+Q +D R + L +SH +DVT + F P++ N ++S S DG +D
Sbjct: 121 LQGIDAAVYIYDIRKWDTPLRSLIDSHHDDVTCIKFHPSDVNILLSGSTDGYTNIYDLKQ 180
Query: 200 DINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSL 259
D ++D L VIN S+ G+ K ++ L+H+ET +I + D + + + L
Sbjct: 181 D-EEEDALHQVINYA-SIHSCGWLSP--KRIFTLSHMETFAIHELNDKSD--ELKEPQPL 234
Query: 260 A-SDSWTLDDVDYFVDCHYPG 279
D + + DY VD YPG
Sbjct: 235 DFGDVREIWNCDYVVDI-YPG 254
>POMBASE|SPCC63.06 [details] [associations]
symbol:SPCC63.06 "human WDR89 family WD repeat protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC63.06 GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:CU329672 eggNOG:NOG285804 PIR:T41507 RefSeq:NP_587980.1
ProteinModelPortal:Q9Y7T2 EnsemblFungi:SPCC63.06.1 GeneID:2538796
KEGG:spo:SPCC63.06 OMA:GHAGHIS OrthoDB:EOG4KSSTQ NextBio:20799978
Uniprot:Q9Y7T2
Length = 331
Score = 167 (63.8 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 62/240 (25%), Positives = 113/240 (47%)
Query: 57 LSTNVVKLYSPVTGQYSGECKGHSSTVNQI-----SFSGPSTPHVLH---SCSSDGTIRA 108
L NVV YS TG +S KG + ++ + +G + L+ +C S+G I
Sbjct: 24 LKDNVVVSYS--TGSWSCFDKGTLLEIFKVPKAHTNITGIISCDQLNGVITCGSEGEIHL 81
Query: 109 WDTRSFHE--VWSVTAGSQEIFCFSFGGSTDYLLAAGCG---SQIQFWDWRNK-KQVACL 162
WD RS + V S T S C + + + + +Q WD R++ K +
Sbjct: 82 WDIRSQAKSAVRSWTQQSTPFTCIALNKKNQFATGSELTRSLASVQLWDVRSEQKLIRQW 141
Query: 163 EESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT-----GGDINDDDLLESVINVGTSV 217
++H +D+T + F P + +++ SVDGL+ DT D +D LL VIN G S+
Sbjct: 142 NDAHNDDITHLQFHPKDNELLLTGSVDGLVSLLDTTKEEDSTDPEEDPLLH-VINHGASI 200
Query: 218 GKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHY 277
F + K + L+H+E+ +++ K ++ ++ + ++ +++DD+ + C Y
Sbjct: 201 HLAKFVSK--KRVMVLSHMESYAMYKLKRDKDEKTWSS-----NELFSIDDLRAELSCSY 253
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS SV A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E AS+
Sbjct: 398 MQIWQMAENIYNDEEPDIPASE 419
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS SV A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E AS+
Sbjct: 398 MQIWQMAENIYNDEEPDIPASE 419
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS SV A + E+ C
Sbjct: 223 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNC 276
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 277 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGT 336
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 337 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 396
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E A++
Sbjct: 397 MQIWQMAENIYNDEEPDIAAAE 418
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + AS+
Sbjct: 398 MQIWQMAENIYNDEESDVTASE 419
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/167 (24%), Positives = 76/167 (45%)
Query: 101 SSDGTIRAWDTRSFHEV---WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNK 156
+ D + WDTRS + SV A + E+ C SF ++++LA G + + WD RN
Sbjct: 2 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 61
Query: 157 KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT---GGDINDDDLLESVINV 213
K ESH +++ QV + P+N+ + S+ D + +D G + + +D + +
Sbjct: 62 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 121
Query: 214 ----GTSVGKVGFFGETNKHLWCLTHIETLSIWD-WKDGQNVASFEN 255
G K+ F W + + +I W+ +N+ + E+
Sbjct: 122 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 168
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
KGH+ +V I +S PS V SCS D T+R WD R +V A + ++ S+ +
Sbjct: 293 KGHTESVEDIQWS-PSEEKVFASCSIDQTVRIWDIRKPKPAITVKAHTADVNVISWSRNV 351
Query: 137 DYLLAAGCGS-QIQFWDWRNKKQVACLEES--HVEDVTQVHFVPNNQNKVVSASVDGLIC 193
+YLL +GC + WD R K + + + H +T + + P +++V+ +S D +
Sbjct: 352 EYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVT 411
Query: 194 TFD 196
+D
Sbjct: 412 IWD 414
>UNIPROTKB|G4N754 [details] [associations]
symbol:MGG_03611 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001234 RefSeq:XP_003716286.1
ProteinModelPortal:G4N754 EnsemblFungi:MGG_03611T0 GeneID:2676653
KEGG:mgr:MGG_03611 Uniprot:G4N754
Length = 340
Score = 155 (59.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 58/242 (23%), Positives = 107/242 (44%)
Query: 37 GD-DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGP--ST 93
GD Y+ +I P L A++ + + L+ P G + + I+ + P
Sbjct: 18 GDVPYIIDIFPLTA-GLAAIA-TDQTLSLFEPSALHSKGAIRTLRTPHANITVAAPFDQA 75
Query: 94 PHVLHSCSSDGTIRAWDTRS-----FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG--- 145
+ + SDGT+ WD R ++ + + C G+ ++A G
Sbjct: 76 QSTVCTAGSDGTVAIWDLRVGAGQVTRQIGTAPTSIGSLACCP--GAN--MVAVGTEYEN 131
Query: 146 --SQIQFWDWRNKKQ-VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN 202
+ I WD R + V E H +D+T+++F P + + ++S S DGL+ +D +
Sbjct: 132 NQASIVIWDIRTQSAPVVQYNEVHSDDITELNFHPADNHTLLSGSTDGLVNVYDLRVT-D 190
Query: 203 DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN----VASFENARS 258
+D+++ +N G SV GF T ++ L+H E L+ +D + Q+ A F + R
Sbjct: 191 EDEVIIQTLNHGASVHHAGFLNRTE--VFALSHDEKLAFFDLAEEQDKGVATADFGDMRQ 248
Query: 259 LA 260
+A
Sbjct: 249 VA 250
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/202 (25%), Positives = 91/202 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + AS+
Sbjct: 399 MQVWQMAENIYNDEEPDTPASE 420
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 215 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 268
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 269 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 328
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 329 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 388
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 389 MQIWQMAENIYNDEESDVTTSE 410
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 215 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 268
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 269 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 328
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 329 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 388
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 389 MQIWQMAENIYNDEESDVTTSE 410
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 398 MQIWQMAENIYNDEESDVTTSE 419
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 398 MQIWQMAENIYNDEESDVTTSE 419
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 398 MQIWQMAENIYNDEESDVTTSE 419
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 398 MQIWQMAENIYNDEESDVTTSE 419
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 398 MQIWQMAENIYNDEESDVTTSE 419
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 133 (51.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 109 WDTRSFHEV---WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEE 164
WDTRS + SV A + E+ C SF ++++LA G + + WD RN K E
Sbjct: 3 WDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 62
Query: 165 SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT---GGDINDDDLLESVINV----GTSV 217
SH +++ QV + P+N+ + S+ D + +D G + + +D + + G
Sbjct: 63 SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHT 122
Query: 218 GKVGFFGETNKHLWCLTHIETLSIWD-WKDGQNVASFEN 255
K+ F W + + +I W+ +N+ + E+
Sbjct: 123 AKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED 161
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 268 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 321
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 322 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 381
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 382 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 441
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 442 MQIWQMAENIYNDEESDVTTSE 463
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 268 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 321
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 322 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 381
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 382 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 441
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +N+ + E + S+
Sbjct: 442 MQIWQMAENIYNDEESDVTTSE 463
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 50/196 (25%), Positives = 87/196 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QVH+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGT 337
Query: 189 DGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G+ +D E + G K+ F W + + +I
Sbjct: 338 DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 397
Query: 242 WD-WKDGQNVASFENA 256
W+ +N+ + E +
Sbjct: 398 MQIWQMAENIYNDEES 413
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/195 (25%), Positives = 91/195 (46%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF +++++LA+G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 190 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 243
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 244 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 303
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 304 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 363
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 364 MQVWQMAENIYNDED 378
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 141 (54.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 38/149 (25%), Positives = 64/149 (42%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + WD + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
DV F P+ + +AS D + +D
Sbjct: 257 NDVVACEFSPDGA-LLATASYDTRVYVWD 284
Score = 54 (24.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 189 DGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241
+GL CTF T G SV+ GT G V F+ T + + L H+ ++I
Sbjct: 353 NGLCCTFSTDG---------SVLAAGTQDGSVHFWA-TPRQVSSLQHLCRMAI 395
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 41/149 (27%), Positives = 66/149 (44%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P VL S S D T+R
Sbjct: 140 DQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTDIVRDLTFA-PDGSLVLVSASRDKTLRV 198
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++C +F + L + G G + WD + LE H
Sbjct: 199 WDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLEGHH- 257
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
DV F P+ + +AS D + +D
Sbjct: 258 NDVVCCEFSPDGA-LLATASYDTRVIVWD 285
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENINNDED 413
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 153 (58.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 49/195 (25%), Positives = 89/195 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + SV A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFEN 255
W+ +N+ + E+
Sbjct: 399 MQVWQMAENIYNDED 413
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 152 (58.6 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +S+ H+LH S + D + WDTRS + +V A + E+ C
Sbjct: 225 GHTAVVEDVSW------HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNC 278
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 279 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 338
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 339 DRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNI 398
Query: 242 WD-WKDGQNVASFENARSLA 260
W+ +N+ + E+ A
Sbjct: 399 MQVWQMAENIYNDEDPEGAA 418
>RGD|1304773 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1304773 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 KO:K10143 CTD:64326 HOVERGEN:HBG054995 EMBL:BC091284
IPI:IPI00363852 RefSeq:NP_001020297.1 UniGene:Rn.8617
ProteinModelPortal:Q5BJY0 PhosphoSite:Q5BJY0 GeneID:360860
KEGG:rno:360860 NextBio:674404 Genevestigator:Q5BJY0 Uniprot:Q5BJY0
Length = 433
Score = 151 (58.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 62/251 (24%), Positives = 106/251 (42%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 186 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 244
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 245 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 303
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKH 229
V+ FV + +VSAS D + ++ G + IN VG +
Sbjct: 304 VSYAKFVSGEE--IVSASTDSQLKLWNVGKPYCLRSF-KGHINEKNFVG----LASNGDY 356
Query: 230 LWCLTHIETLSIWDWKDGQNVASF--ENARSLASDSWTLDDVDYFVD--CHYP-GEGENL 284
+ C + +L ++ + + +F + +S+ DD + FV C +GE+
Sbjct: 357 IACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESN 416
Query: 285 WVIGGTGAGTV 295
+I GT+
Sbjct: 417 VLIAANSQGTI 427
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/191 (23%), Positives = 78/191 (40%)
Query: 68 VTGQY--SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ 125
++GQ + KGHSS +SF V S D + WD R + +
Sbjct: 207 ISGQIVPQSKFKGHSSNAEDVSFHALHN-FVFGSVGDDRKLNLWDLRQSKPQLTAVGHTA 265
Query: 126 EIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVV 184
E+ C +F ++Y+LA G + + WD RN ++ + H +++ QV F P+ + +
Sbjct: 266 EVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLA 325
Query: 185 SASVDGLICTFD--------TGGDINDDDLLESVINVGTS-VGKVGFFGETNKHLW--CL 233
S+ D + +D + + D + VI + GKV F W C
Sbjct: 326 SSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICS 385
Query: 234 T-HIETLSIWD 243
+ L +W+
Sbjct: 386 SDEFNALQVWE 396
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/186 (24%), Positives = 79/186 (42%)
Query: 77 KGHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFS 131
KGH S V +++ HVLH S D + WD R+ + A S E+ C +
Sbjct: 219 KGHESVVEDVAW------HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLA 272
Query: 132 FGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
F ++++LA G + + WD RN + ESH +++ QV + P+N+ + S+ D
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Query: 191 LICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIET---LS 240
+ +D G D + +D + + G K+ F W + + L
Sbjct: 333 RLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQ 392
Query: 241 IWDWKD 246
+W D
Sbjct: 393 VWQMAD 398
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 46/186 (24%), Positives = 79/186 (42%)
Query: 77 KGHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFS 131
KGH S V +++ HVLH S D + WD R+ + A S E+ C +
Sbjct: 219 KGHESVVEDVAW------HVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLA 272
Query: 132 FGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
F ++++LA G + + WD RN + ESH +++ QV + P+N+ + S+ D
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Query: 191 LICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIET---LS 240
+ +D G D + +D + + G K+ F W + + L
Sbjct: 333 RLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQ 392
Query: 241 IWDWKD 246
+W D
Sbjct: 393 VWQMAD 398
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/154 (25%), Positives = 74/154 (48%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
PK W+L VSL ++ ++L+ G + H V + F P+ P + S D T
Sbjct: 21 PKRPWAL--VSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFH-PTQP-LFVSGGDDYT 76
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
I+ W + ++++ I SF ++++ I+ W+W+N++++ACL
Sbjct: 77 IKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLT-G 135
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGG 199
H V F P+ ++ +VSAS+D + +D G
Sbjct: 136 HNHYVMSAQFHPS-EDLIVSASLDQTVRVWDISG 168
>ZFIN|ZDB-GENE-070410-134 [details] [associations]
symbol:rfwd2 "ring finger and WD repeat domain 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
ZFIN:ZDB-GENE-070410-134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 CTD:64326
HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 EMBL:BC139708 IPI:IPI00851801
RefSeq:NP_001083011.1 UniGene:Dr.159867 ProteinModelPortal:A4QP94
STRING:A4QP94 GeneID:100037391 KEGG:dre:100037391 NextBio:20788550
Uniprot:A4QP94
Length = 694
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 66/259 (25%), Positives = 110/259 (42%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 447 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 505
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F ++ Y LA GC + ++D RN KQ + + H +
Sbjct: 506 TNLDNSVASIEAKAN-VCCVKFSPTSRYHLAFGCADHCVHYYDLRNAKQPIMVFKGHRKA 564
Query: 170 VTQVHFVPNNQNKVVSASVDGLI---------CTFDTGGDINDDDLLESVINVGTSVGKV 220
V+ FV N ++VSAS D + C G IN+ ++ + + ++ V
Sbjct: 565 VSYAKFV--NGGEIVSASTDSQLKLWNVNKPHCLRSFKGHINE----KNFVGLASNGDYV 618
Query: 221 GFFGETNK-HLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD--CHY 277
E N +L+C +TL + F+ +S+ DD + FV C
Sbjct: 619 ACGSENNSLYLYCKGLSKTLLTF---------KFDTVKSVLDKDKKEDDTNEFVSAVCWR 669
Query: 278 P-GEGENLWVIGGTGAGTV 295
+GE+ +I GT+
Sbjct: 670 ALPDGESNVLIAANSQGTI 688
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D SL+ + + V ++ TG+ KGH+S VN F P + +
Sbjct: 102 VMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC-FPARRGPQLACTG 160
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R V + + ++ +F ++D +++ G + I+ WD R K +
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIY 219
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
++ H + VT + + + ++S S+D + +D
Sbjct: 220 SMQ-GHGDSVTGLSLSADG-SYLLSNSMDNSVRVWD 253
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 155 (59.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 79/291 (27%), Positives = 122/291 (41%)
Query: 21 NSIKRFGLKNS-IQTNFGDDY--VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK 77
N+IK + L S +Q + D V + D +A S + +KL+ TG+ +
Sbjct: 1024 NTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLE 1083
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GHS V ++FS P +L S S DGTI+ W+ + ++T S + +F
Sbjct: 1084 GHSQGVRSVTFS-PDGK-LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGK 1141
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT 197
L + S I+ WD + + LE H + + V F P+ + + S S D +D
Sbjct: 1142 QLASGYYDSTIKLWDSATGELLQTLE-GHSDRIQSVVFSPDGK-LLASGSYDQTAKLWDP 1199
Query: 198 GGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF---- 253
+LL+ V V F + K L ++ ET+ +WD G+ + +
Sbjct: 1200 A----TGELLQIFEGHSKWVESVAFSPD-GKLLASSSYGETIKLWDPVTGELLQTLNDPD 1254
Query: 254 ENARSLA--SDSWTLDDVDYF-VDCHYPGEGENL--------WVIGGTGAG 293
E+A S+A D L VD F P GE L WV TGAG
Sbjct: 1255 ESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHSKWVWSRTGAG 1305
Score = 151 (58.2 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 28 LKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87
L+ S++ G +V + D +A N VKL++P TG+ +GHS +V ++
Sbjct: 910 LQQSLEGRSG--WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA 967
Query: 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGS 146
FS P L S SSD TI+ W++ + E+ G I +F +L++ +
Sbjct: 968 FS-PDGKQ-LASSSSDTTIKLWNSTT-GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDN 1024
Query: 147 QIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG-GDI 201
I+ WD + LE+ H V V F P+++ ++ S+S+D I +D+ G++
Sbjct: 1025 TIKLWDLATSELQQSLED-HSRSVHAVAFSPDDK-QLASSSLDSTIKLWDSATGEL 1078
Score = 145 (56.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 54/209 (25%), Positives = 97/209 (46%)
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119
+ VK++ P TG+ GHS TV ++FS P +L S S D TI WD+ + + +
Sbjct: 772 DTVKIWDPATGELLQTLDGHSGTVESLAFS-PDGK-LLASGSYDNTIDLWDSATGELLQT 829
Query: 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179
I+ +F L +A S I+ WD + L+ SH + V V F P+
Sbjct: 830 FEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLD-SHSQSVRSVAFSPDG 888
Query: 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239
+ + S+S+D I ++ +L +S+ V V F + K L + T+
Sbjct: 889 K-LLASSSLDSTIKVWNPA----TGELQQSLEGRSGWVKSVAFSPD-GKKLASGSEKNTV 942
Query: 240 SIWDWKDGQNVASFE-NARSLASDSWTLD 267
+W+ G+ + + E +++S+ S +++ D
Sbjct: 943 KLWNPATGELLQTLEGHSQSVRSVAFSPD 971
Score = 131 (51.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 50/220 (22%), Positives = 102/220 (46%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A S + +K+++P TG+ +G S V ++FS P L S S T++
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFS-PDGKK-LASGSEKNTVKL 944
Query: 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168
W+ + + ++ SQ + +F L ++ + I+ W+ ++ + H
Sbjct: 945 WNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-STTGELQQTFKGHDL 1003
Query: 169 DVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNK 228
+ V F P+ ++ +VS S D I +D + +L +S+ + SV V F + +K
Sbjct: 1004 WIRAVAFSPDGKH-LVSGSDDNTIKLWD----LATSELQQSLEDHSRSVHAVAFSPD-DK 1057
Query: 229 HLWCLTHIETLSIWDWKDGQNVASFE-NARSLASDSWTLD 267
L + T+ +WD G+ + E +++ + S +++ D
Sbjct: 1058 QLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 56/257 (21%), Positives = 111/257 (43%)
Query: 14 SQSCDNVNSIKRFGLKNSIQTNFGDDY-VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQY 72
S S DN + +QT G + ++ + D +A + + +K++ TG+
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGEL 868
Query: 73 SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSF 132
HS +V ++FS P +L S S D TI+ W+ + S+ S + +F
Sbjct: 869 QQTLDSHSQSVRSVAFS-PDGK-LLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 133 GGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLI 192
L + + ++ W+ + + LE H + V V F P+ + ++ S+S D I
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLE-GHSQSVRSVAFSPDGK-QLASSSSDTTI 984
Query: 193 CTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVAS 252
+++ +L ++ + V F + KHL + T+ +WD + S
Sbjct: 985 KLWNS----TTGELQQTFKGHDLWIRAVAFSPD-GKHLVSGSDDNTIKLWDLATSELQQS 1039
Query: 253 FEN-ARSLASDSWTLDD 268
E+ +RS+ + +++ DD
Sbjct: 1040 LEDHSRSVHAVAFSPDD 1056
>UNIPROTKB|H0Y339 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
EMBL:AL359265 EMBL:AL162736 EMBL:AL513329 EMBL:AL590723
HGNC:HGNC:17440 ChiTaRS:RFWD2 Ensembl:ENST00000367666 Bgee:H0Y339
Uniprot:H0Y339
Length = 566
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 319 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 377
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 378 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 436
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG 198
V+ FV + +VSAS D + ++ G
Sbjct: 437 VSYAKFVSGEE--IVSASTDSQLKLWNVG 463
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/202 (24%), Positives = 91/202 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFC 129
GH++ V +++ H+LH S + D + WDTR+ + +V A + E+ C
Sbjct: 229 GHTAVVEDVAW------HLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
SF ++++LA G + + WD RN K ESH +++ QV + P+N+ + S+
Sbjct: 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 342
Query: 189 DGLICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSI 241
D + +D G + + +D + + G K+ F W + + +I
Sbjct: 343 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402
Query: 242 WD-WKDGQNVASFENARSLASD 262
W+ +NV + E AS+
Sbjct: 403 MQVWQMAENVYNDEEPEIPASE 424
>MGI|MGI:1347046 [details] [associations]
symbol:Rfwd2 "ring finger and WD repeat domain 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1347046
Prosite:PS00518 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0016874 GO:GO:0016607 GO:GO:0008270 eggNOG:COG2319
GO:GO:0005925 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
CTD:64326 HOVERGEN:HBG054995 OrthoDB:EOG4M0F18 ChiTaRS:RFWD2
EMBL:AF151110 EMBL:BC082804 IPI:IPI00621828 RefSeq:NP_036061.1
UniGene:Mm.328135 ProteinModelPortal:Q9R1A8 SMR:Q9R1A8
STRING:Q9R1A8 PhosphoSite:Q9R1A8 PaxDb:Q9R1A8 PRIDE:Q9R1A8
Ensembl:ENSMUST00000076894 GeneID:26374 KEGG:mmu:26374
UCSC:uc007ddz.1 GeneTree:ENSGT00700000104377 InParanoid:Q9R1A8
NextBio:304277 Bgee:Q9R1A8 CleanEx:MM_RFWD2 Genevestigator:Q9R1A8
GermOnline:ENSMUSG00000048949 Uniprot:Q9R1A8
Length = 733
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 62/251 (24%), Positives = 106/251 (42%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 486 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 544
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 545 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 603
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKH 229
V+ FV + +VSAS D + ++ G + IN VG +
Sbjct: 604 VSYAKFVSGEE--IVSASTDSQLKLWNVGKPYCLRSF-KGHINEKNFVG----LASNGDY 656
Query: 230 LWCLTHIETLSIWDWKDGQNVASF--ENARSLASDSWTLDDVDYFVD--CHYP-GEGENL 284
+ C + +L ++ + + +F + +S+ DD + FV C +GE+
Sbjct: 657 IACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESN 716
Query: 285 WVIGGTGAGTV 295
+I GT+
Sbjct: 717 VLIAANSQGTI 727
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 54 AVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113
A S S + +Y+ TG+ GH+ ++ I +S P ++L SCS D TIR W+
Sbjct: 42 ACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYS-PINSNILASCSDDLTIRLWNITQ 100
Query: 114 FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWD-WRNKKQVACLEESHVEDVTQ 172
+ + + I F + L++ I WD N ++ +H + V+
Sbjct: 101 QRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITIWDITSNGGKILTTLAAHSDPVSS 160
Query: 173 VHFVPNNQNKVVSASVDGLICTFD 196
+ P++ + +VSAS DGL+ FD
Sbjct: 161 IALTPDD-SIIVSASYDGLMRLFD 183
>UNIPROTKB|F1NQ64 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:AADN02034166 IPI:IPI00602963
Ensembl:ENSGALT00000007170 Uniprot:F1NQ64
Length = 717
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 470 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 528
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 529 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 587
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG 198
V+ FV + +VSAS D + ++ G
Sbjct: 588 VSYAKFVSGEE--IVSASTDSQLKLWNVG 614
>UNIPROTKB|Q8NHY2 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0005813
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006977
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0016874 GO:GO:0016607
GO:GO:0008270 eggNOG:COG2319 EMBL:CH471067 GO:GO:0005925
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000006123 KO:K10143 OMA:PICFEMI
EMBL:AF508940 EMBL:BK000438 EMBL:AF527539 EMBL:AY509921
EMBL:AK025789 EMBL:AK314750 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 EMBL:BC094728 IPI:IPI00171771
IPI:IPI00184865 IPI:IPI00431955 RefSeq:NP_001001740.1
RefSeq:NP_071902.2 UniGene:Hs.523744 ProteinModelPortal:Q8NHY2
SMR:Q8NHY2 IntAct:Q8NHY2 MINT:MINT-260162 STRING:Q8NHY2
PhosphoSite:Q8NHY2 DMDM:55976539 PaxDb:Q8NHY2 PRIDE:Q8NHY2
DNASU:64326 Ensembl:ENST00000308769 Ensembl:ENST00000367669
GeneID:64326 KEGG:hsa:64326 UCSC:uc001gku.1 UCSC:uc001gkv.1
UCSC:uc009wwv.2 CTD:64326 GeneCards:GC01M175913 HGNC:HGNC:17440
HPA:HPA028197 MIM:608067 neXtProt:NX_Q8NHY2 PharmGKB:PA134952161
HOVERGEN:HBG054995 InParanoid:Q8NHY2 OrthoDB:EOG4M0F18
ChiTaRS:RFWD2 GenomeRNAi:64326 NextBio:66247 ArrayExpress:Q8NHY2
Bgee:Q8NHY2 CleanEx:HS_RFWD2 Genevestigator:Q8NHY2
GermOnline:ENSG00000143207 Uniprot:Q8NHY2
Length = 731
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 484 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 542
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 543 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 601
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG 198
V+ FV + +VSAS D + ++ G
Sbjct: 602 VSYAKFVSGEE--IVSASTDSQLKLWNVG 628
>UNIPROTKB|E2RRJ5 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 OMA:PICFEMI
CTD:64326 GeneTree:ENSGT00700000104377 EMBL:AAEX03005193
EMBL:AAEX03005194 RefSeq:XP_537181.2 ProteinModelPortal:E2RRJ5
Ensembl:ENSCAFT00000022674 GeneID:480060 KEGG:cfa:480060
Uniprot:E2RRJ5
Length = 733
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 486 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 544
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 545 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 603
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG 198
V+ FV + +VSAS D + ++ G
Sbjct: 604 VSYAKFVSGEE--IVSASTDSQLKLWNVG 630
>UNIPROTKB|F1MHX1 [details] [associations]
symbol:RFWD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 OMA:PICFEMI
GeneTree:ENSGT00700000104377 EMBL:DAAA02043390 EMBL:DAAA02043391
EMBL:DAAA02043392 IPI:IPI00841834 UniGene:Bt.7449
Ensembl:ENSBTAT00000044452 ArrayExpress:F1MHX1 Uniprot:F1MHX1
Length = 735
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 44/149 (29%), Positives = 70/149 (46%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A S V L+ TGQ S + H + F+ P +L S S D ++ W
Sbjct: 488 NLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFN-LMDPKLLASGSDDAKVKLWS 546
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVED 169
T + V S+ A + + C F S+ Y LA GC + ++D RN KQ + + H +
Sbjct: 547 TNLDNSVASIEAKAN-VCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKA 605
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG 198
V+ FV + +VSAS D + ++ G
Sbjct: 606 VSYAKFVSGEE--IVSASTDSQLKLWNVG 632
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 39/138 (28%), Positives = 66/138 (47%)
Query: 77 KGHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFS 131
KGH S V +++ HVLH S D + WD R+ ++ A S E+ C +
Sbjct: 219 KGHESVVEDVAW------HVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLA 272
Query: 132 FGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
F ++++LA G + + WD RN + ESH +++ QV + P+N+ + S+ D
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDK 332
Query: 191 LICTFDTGGDINDDDLLE 208
+ +D I +D E
Sbjct: 333 RLHVWDLS-KIGEDQTAE 349
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 51/203 (25%), Positives = 89/203 (43%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRS---FHEVWSVTAGSQEIFC 129
GHS+ V +++ H+LH S + D + WDTRS V A + E+ C
Sbjct: 224 GHSAVVEDVAW------HLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNC 277
Query: 130 FSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQV-HFVPNNQNKVVSAS 187
SF ++++LA G + + WD RN K ESH +++ QV H+ P+N+ + S+
Sbjct: 278 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSG 337
Query: 188 VDGLICTFDTG--GDIN-----DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLS 240
D + +D G+ +D E + G K+ F W + + +
Sbjct: 338 TDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDN 397
Query: 241 IWD-WKDGQNVASFENARSLASD 262
I W+ +N+ + E + S+
Sbjct: 398 IMQIWQMAENIYNDEESDVTTSE 420
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 171
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R V + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 172 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 231 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GHS T+ +++S P + L S S D T+ WD +S + T E S S
Sbjct: 58 GHSRTIRDVAWS-PCGQY-LASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKS 115
Query: 138 YLLAAGCGSQIQFWDWR----NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLIC 193
L A C W W ++ + A + +H +DV +V + P+ ++ + SAS D I
Sbjct: 116 GSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPH-EDILASASYDNTIK 174
Query: 194 TFDTGGDINDDDL--LESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW-DWKDG 247
+ D+ D D +++++ ++V + F G N+ C + +T+ IW ++K G
Sbjct: 175 LYKE--DLADSDWSSFDTLVSHESTVWSISFDGSGNRLASC-SDDQTVKIWQEYKPG 228
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 170
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 230 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 263
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 171
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 231 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 171
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 231 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 171
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 231 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 143 (55.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 171
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 172 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 230
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 231 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 264
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 143 (55.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 139 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 197
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R V + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 256
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 257 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRIWD 290
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 118 VPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 176
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 236
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 237 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 267
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 120 VPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 178
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 238
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 239 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 120 VPDISCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 178
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 238
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 239 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 35/156 (22%), Positives = 75/156 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V E+ D S++ + + V ++ TG+ KGH+S VN + P ++ +
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC-YPARRGPQLVCTG 170
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
S DGT++ WD R + + + ++ +F ++D +++ G + I+ WD R K
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 229
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ H + VT + + + + ++S ++D + +D
Sbjct: 230 TMR-GHADSVTGLS-LSSEGSYLLSNAMDNTVRVWD 263
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 141 (54.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 38/149 (25%), Positives = 64/149 (42%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + WD + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
DV F P+ + +AS D + +D
Sbjct: 257 NDVVACEFSPDGA-LLATASYDTRVYVWD 284
Score = 43 (20.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 189 DGLICTFDTGGDI 201
+GL CTF T G +
Sbjct: 353 NGLCCTFSTDGSV 365
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 149 (57.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 41/154 (26%), Positives = 72/154 (46%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P W L+A+ ST ++L+ G + H V + F P+ P + S D T
Sbjct: 21 PSRPWVLVALFSST--IQLWDYRMGTLLHRFEDHEGPVRGLDFH-PTQP-IFVSAGDDYT 76
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
I+ W + ++++T + F ++++A I+ W+W+N+K++ACL
Sbjct: 77 IKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLT-G 135
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGG 199
H V F P + + +VSAS+D I +D G
Sbjct: 136 HNHFVMCAQFHPTD-DLIVSASLDETIRIWDISG 168
>UNIPROTKB|F1RJ54 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:FP102612 RefSeq:XP_003131801.1 UniGene:Ssc.25169
Ensembl:ENSSSCT00000019321 GeneID:100525660 KEGG:ssc:100525660
Uniprot:F1RJ54
Length = 421
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 41/155 (26%), Positives = 67/155 (43%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + WD + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWDMDKYTMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTG-GDI 201
DV F P+ + +AS D + +D GDI
Sbjct: 257 HDVVACDFSPDGA-LLATASYDTRVYIWDPHTGDI 290
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/147 (25%), Positives = 72/147 (48%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE--VWSVTAGSQEIFCFSFGG 134
+GH+S+V ++ +S P+ +V S SSDGT++ WD RS +V + ++ ++
Sbjct: 300 RGHASSVEELQWS-PNEKNVFASASSDGTVKVWDVRSKSRSPAVNVKISNTDVNVMTWSK 358
Query: 135 STDYLLAAGCGS-QIQFWD---WR-NKKQVACLEES-------HVEDVTQVHFVPNNQNK 182
T +LLA G Q WD W+ N A + S H E +T + + P + +
Sbjct: 359 QTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSV 418
Query: 183 VVSASVDGLICTFDTGGDINDDDLLES 209
+ S D + +D ++++++ E+
Sbjct: 419 IAVGSADNTVTLWDLAVELDEEESREA 445
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 142 (55.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 118 VPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 176
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 236
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 237 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 267
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 142 (55.0 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 120 VPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 178
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 238
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 239 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 142 (55.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ PS +L S S D
Sbjct: 135 VPDVSCLVLATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDK 193
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 194 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 253
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 254 -GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 284
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 142 (55.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 42/151 (27%), Positives = 70/151 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
W + S +++ K+ SP+ + H+ VN + F P +L S S D T++
Sbjct: 210 WDVQTQSFTSSETKVISPIAKYHR-----HTDIVNDVQFH-PQHEALLASVSDDCTLQIH 263
Query: 110 DTRSFHEVWS---VTAGSQEIFCFSFGGSTDYLLA-AGCGSQIQFWDWRNKKQVACLEES 165
DTR E + + A S+ I + DYLLA A + WD RN Q E
Sbjct: 264 DTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEG 323
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H ++V + + P+++ + S+S D +C +D
Sbjct: 324 HEDEVYGLEWSPHDEPILASSSTDRRVCIWD 354
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE-VWSVTAGSQEIFCFSFGGST 136
GHS + I+F+ P P VL +CS D + AWD RS H +S ++ +
Sbjct: 112 GHSRAITDINFN-PQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKD 170
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+LA+ G+ I WD R C + HV V + F ++++S+S DG + +D
Sbjct: 171 PNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWD 230
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/146 (27%), Positives = 64/146 (43%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111
++A L+ +K++ TG GH V +SF+ PS +L S S D T+R WD
Sbjct: 125 ILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PSGSLILVSASRDKTLRIWDL 183
Query: 112 RSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV 170
+ V +G Q ++C S L +A + W R+ + LE H V
Sbjct: 184 NKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSV 242
Query: 171 TQVHFVPNNQNKVVSASVDGLICTFD 196
F P++ +V+AS D + +D
Sbjct: 243 VSCDFSPDSA-LLVTASYDTSVIMWD 267
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/153 (26%), Positives = 66/153 (43%)
Query: 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104
VP ++A L+ +K++ TG GH V +SF+ P+ +L S S D
Sbjct: 118 VPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDVVRDLSFT-PNGSLILVSASRDK 176
Query: 105 TIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
T+R WD + V +G Q ++C S L +A + W R+ + LE
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLE 236
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V F P++ +V+AS D + +D
Sbjct: 237 -GHQSSVVSCDFSPDSA-LLVTASYDTSVIMWD 267
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 149 (57.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 44/162 (27%), Positives = 78/162 (48%)
Query: 28 LKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87
L+N+++ + +++V +V +D L+A + VK++ TG KGH+ +V +
Sbjct: 297 LQNTLEGH--NEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVV 354
Query: 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ 147
FS S ++ S S+D T+R W+T + + + SF + L +A G
Sbjct: 355 FSHDS--RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGN 412
Query: 148 IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189
++ WD R LE H + V V F P+++ + SAS D
Sbjct: 413 VKIWDTRTGSLQNVLE-GHDDCVNSVSFSPDSR-LLASASDD 452
Score = 132 (51.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 28 LKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87
L+N+++++ D++V +V +D L+A + VK++ TG +GH VN +S
Sbjct: 507 LQNNLESH--DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVS 564
Query: 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEI-FCFSFGGSTDYLLAAGCGS 146
FS S +L S S DGT++ W + V GS + +F +++ L +A
Sbjct: 565 FSPDS--RLLASASDDGTVKIWYAAT-GTVQHTFDGSGRVAISLAFSHTSNLLASAMDDG 621
Query: 147 QIQFWD 152
++ WD
Sbjct: 622 TVKIWD 627
Score = 127 (49.8 bits), Expect = 0.00028, P = 0.00028
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 28 LKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87
L+N ++ + DD V + D L+A + VK++ TG +GH+ V +
Sbjct: 423 LQNVLEGH--DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Query: 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ 147
FS S ++ S S D T++ WDT + ++ + + F + L +A
Sbjct: 481 FSHDS--RLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMT 538
Query: 148 IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLI 192
++ WD LE H + V V F P+++ + SAS DG +
Sbjct: 539 VKIWDTATGSLENTLE-GHDDRVNSVSFSPDSR-LLASASDDGTV 581
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/188 (24%), Positives = 81/188 (43%)
Query: 78 GHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAWDTRSFHE-VWSVTAGSQEIFCFS 131
GH+S V +++ H +H S D + WDTR+ + + V A + E+ C S
Sbjct: 222 GHTSIVEDVAW------HYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLS 275
Query: 132 FGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
F ++L+A G + + WD RN SH ++V QV F P+N+ + S D
Sbjct: 276 FNPFCEFLVATGSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDR 335
Query: 191 LICTFDT---GGDINDDDLLESVINV----GTSVGKVGFFGETNKHLWCLTHIETLSIWD 243
+ +D G + N++D + + G K+ F W + + +I
Sbjct: 336 RVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQ 395
Query: 244 -WKDGQNV 250
W+ +N+
Sbjct: 396 IWQMAENI 403
>UNIPROTKB|E2RFV0 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:AAEX03006660 RefSeq:XP_853945.1 ProteinModelPortal:E2RFV0
Ensembl:ENSCAFT00000029577 GeneID:480619 KEGG:cfa:480619
NextBio:20855611 Uniprot:E2RFV0
Length = 421
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/155 (25%), Positives = 67/155 (43%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + W+ + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDT-GGDI 201
DV F P+ + +AS D + +D GDI
Sbjct: 257 HDVVACDFSPDGA-LLATASYDTRVYIWDPHNGDI 290
>UNIPROTKB|Q9Y6I7 [details] [associations]
symbol:WSB1 "WD repeat and SOCS box-containing protein 1"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Reactome:REACT_6900
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ EMBL:AF072880 EMBL:AF069313 EMBL:AF240696
EMBL:AL110243 EMBL:AF112205 EMBL:AF106683 EMBL:AL110269
EMBL:BC021110 IPI:IPI00107502 IPI:IPI00146203 IPI:IPI00794974
PIR:T14773 PIR:T14788 RefSeq:NP_056441.6 RefSeq:NP_599027.1
UniGene:Hs.446017 ProteinModelPortal:Q9Y6I7 SMR:Q9Y6I7
IntAct:Q9Y6I7 STRING:Q9Y6I7 PhosphoSite:Q9Y6I7 DMDM:20532298
PaxDb:Q9Y6I7 PRIDE:Q9Y6I7 DNASU:26118 Ensembl:ENST00000262394
Ensembl:ENST00000348811 GeneID:26118 KEGG:hsa:26118 UCSC:uc002gzd.1
UCSC:uc002gze.1 GeneCards:GC17P025621 HGNC:HGNC:19221 HPA:HPA003293
MIM:610091 neXtProt:NX_Q9Y6I7 PharmGKB:PA134867554
InParanoid:Q9Y6I7 PhylomeDB:Q9Y6I7 ChiTaRS:WSB1 GenomeRNAi:26118
NextBio:48120 ArrayExpress:Q9Y6I7 Bgee:Q9Y6I7 CleanEx:HS_WSB1
Genevestigator:Q9Y6I7 GermOnline:ENSG00000109046 Uniprot:Q9Y6I7
Length = 421
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 40/155 (25%), Positives = 67/155 (43%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + W+ + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDT-GGDI 201
DV F P+ + +AS D + +D GDI
Sbjct: 257 HDVVACDFSPDGA-LLATASYDTRVYIWDPHNGDI 290
>MGI|MGI:1289332 [details] [associations]
symbol:Tssc1 "tumor suppressing subtransferable candidate 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1289332 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
eggNOG:NOG314403 HOGENOM:HOG000264967 OMA:ACVAWEP EMBL:AC136986
CTD:7260 HOVERGEN:HBG052937 OrthoDB:EOG4C5CJP EMBL:CT010449
EMBL:BC031458 IPI:IPI00321310 RefSeq:NP_958745.2 UniGene:Mm.273724
ProteinModelPortal:Q8K0G5 SMR:Q8K0G5 STRING:Q8K0G5
PhosphoSite:Q8K0G5 PaxDb:Q8K0G5 PRIDE:Q8K0G5
Ensembl:ENSMUST00000035657 GeneID:380752 KEGG:mmu:380752
UCSC:uc007ngb.2 InParanoid:Q8K0G5 NextBio:401194 Bgee:Q8K0G5
CleanEx:MM_TSSC1 Genevestigator:Q8K0G5
GermOnline:ENSMUSG00000036613 Uniprot:Q8K0G5
Length = 386
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 59/205 (28%), Positives = 97/205 (47%)
Query: 1 MEMEAEESQSQPKSQSCDNVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTN 60
+E + ES P S + + + L NS Q N V+E P D + +SL+ +
Sbjct: 105 LESGSHESPDDPAS-TAQTLELLCH--LDNSAQGNVAC-VVWE--PMGDGKKV-ISLADS 157
Query: 61 VVKLYSPVTGQYSGECKGHSSTVN---QISFS-GPSTPHVLHSCS-----SDGTIRAWDT 111
+ L+ + S S+T+ Q+ F+ G +PH H+C+ SD T+R WDT
Sbjct: 158 HILLWD-LQPSSSQAVLASSATLEGRGQLKFTAGRWSPH--HNCTQVATASDTTLRGWDT 214
Query: 112 RSFHEVWSV-TAGSQEIFCFSFGGSTDYLLAAGCGS--QIQFWDWRNKKQ-VACLEESHV 167
RS +++ + A Q + F + Y LA+ CG +++FWD RN + V LEE H
Sbjct: 215 RSMSQIYCIENAHGQLVRDLDFNPNKQYYLAS-CGDDCKVKFWDTRNVTEPVKTLEE-HS 272
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLI 192
V V + ++ V++ S D +
Sbjct: 273 HWVWSVRYNHSHDQLVLTGSSDSRV 297
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 57/222 (25%), Positives = 93/222 (41%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V + +D L+A + VK++ TG +GHS V + FS S L +
Sbjct: 299 VLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR---LLAS 355
Query: 101 SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160
+SD T++ WDT + ++ + F + L +A S ++ WD
Sbjct: 356 ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH 415
Query: 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG-GDINDDDLLESVINVGTSVGK 219
LE H + V V F ++Q + SAS D + +DTG G + LE + SV
Sbjct: 416 TLE-GHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHT--LEGHRDWVRSV-- 469
Query: 220 VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLAS 261
F ++ L + T+ IWD + G + + E SL +
Sbjct: 470 --IFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVT 509
Score = 126 (49.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLH 98
D+V ++ +D L+A + + VK++ TG +GH V + FS S +L
Sbjct: 380 DWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS--QLLA 437
Query: 99 SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ 158
S S D T++ WDT + ++ + F + L +A ++ WD
Sbjct: 438 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSH 497
Query: 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
LE H VT V F ++ + SAS D + +D
Sbjct: 498 KHTLE-GHSSLVTSVSF-SHDSRLLASASNDQTVRIWD 533
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/122 (31%), Positives = 60/122 (49%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GHS V+ + +S + S S D I+ WD + V S AG++ C S+ +
Sbjct: 255 GHSEAVSSVLWSDVDE---ICSASWDHNIKIWDVET-GTVKSTLAGNKVFNCISYSPLSQ 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R+K V C SH VT V + P+++ ++VS S+D L+ +
Sbjct: 311 RLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D + ++ + + +Y + +Y GH+ ++N +SFS + L S S D T++
Sbjct: 388 DGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFS--ENGYYLASSSKDNTVKL 445
Query: 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE--ESH 166
WD R ++T F SF S YL A + IQ +++ K Q ++ SH
Sbjct: 446 WDLRKAQSFQTITLNETPNF-ISFDYSGKYLSIA-VENDIQIYNFETKNQANLIKTLSSH 503
Query: 167 VEDVTQVHFVPNNQNKVVSASVDGLI 192
+ VTQ F + + ++S+S+D I
Sbjct: 504 TDIVTQTCF-GSTTSYILSSSMDKTI 528
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D + ++ + + +Y + +Y GH+ ++N +SFS + L S S D T++
Sbjct: 388 DGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFS--ENGYYLASSSKDNTVKL 445
Query: 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE--ESH 166
WD R ++T F SF S YL A + IQ +++ K Q ++ SH
Sbjct: 446 WDLRKAQSFQTITLNETPNF-ISFDYSGKYLSIA-VENDIQIYNFETKNQANLIKTLSSH 503
Query: 167 VEDVTQVHFVPNNQNKVVSASVDGLI 192
+ VTQ F + + ++S+S+D I
Sbjct: 504 TDIVTQTCF-GSTTSYILSSSMDKTI 528
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 48/209 (22%), Positives = 81/209 (38%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ V FS + SC +D T++ + + ++ + A E+ C +F Y
Sbjct: 614 HTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSY 671
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
+ +++ WD K V EE H E V HF N N ++ A+ G +F
Sbjct: 672 IATCSVDKKVKIWDSGTGKLVHTYEE-HSEQVNCCHFT-NKSNHLLLAT--GSNDSFLKL 727
Query: 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
D+N + ++ SV F + C TL +WD + S R
Sbjct: 728 WDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSAD-GTLKLWDVRSANEKKSINVKRF 786
Query: 259 LASDSWTLDDVDYFVDC-HYPGEGENLWV 286
S +DV+ V C + +G+ + V
Sbjct: 787 FLSSEDPPEDVEVIVKCCSWSADGDRIIV 815
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLH 98
D V+ D +A + ++++ TG+ + K H V +FS S +
Sbjct: 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFS--SDDSYIA 673
Query: 99 SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLL-AAGCG-SQIQFWDWRNK 156
+CS D ++ WD+ + V + S+++ C F +++LL A G S ++ WD N+
Sbjct: 674 TCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDL-NQ 732
Query: 157 KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
K+ H VT F P+++ + S S DG + +D
Sbjct: 733 KECRNTMFGHTNSVTHCRFSPDDE-LLASCSADGTLKLWD 771
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/177 (24%), Positives = 80/177 (45%)
Query: 31 SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-QYSGECK---GHSSTVNQI 86
S + G+ + + P+ L+ N+ L++P G + + + GH+ +V +
Sbjct: 209 SFAGHMGEGFALDWSPRVTGRLLTGDCQKNI-HLWTPTDGGSWHVDQRPFVGHTRSVEDL 267
Query: 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSFHE----VWSVTAGSQEIFCFSFGGSTDYLLAA 142
+S P+ V SCS+D +IR WD R+ + + TA ++ S+ +LL+
Sbjct: 268 QWS-PTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSG 326
Query: 143 GCGSQIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
G ++ WD R K VA ++ HV VT V + P + ++ D I +D
Sbjct: 327 GDDGALKIWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 31 SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-QYSGECK---GHSSTVNQI 86
S + G+ + + P+ L+ NV L++P G ++ + + GH+ +V +
Sbjct: 209 SFAGHMGEGFALDWSPRVPGRLLTGDCQKNV-HLWTPTEGGSWNVDQRPFVGHTRSVEDL 267
Query: 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSFHE----VWSVTAGSQEIFCFSFGGSTDYLLAA 142
+S P+ V SCS+D +IR WD R+ + + TA ++ S+ +LL+
Sbjct: 268 QWS-PTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLLSG 326
Query: 143 GCGSQIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
G ++ WD R K VA ++ H+ VT V + P + ++ D I +D
Sbjct: 327 GDDGALKVWDLRQFKSGSPVATFKQ-HMAPVTSVEWHPQDSGVFAASGADNQITQWD 382
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 37/157 (23%), Positives = 75/157 (47%)
Query: 48 NDWSLMAVSLSTNVVKLYS------PVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS 101
+D L+A + + ++ Y+ P+ E GH + ++ ++FS S + S S
Sbjct: 34 SDGRLLASASADKTIRTYTINTINDPIAEPVQ-EFTGHENGISDVAFS--SDARFIVSAS 90
Query: 102 SDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161
D T++ WD + + ++ + FC +F ++ +++ ++ WD K +
Sbjct: 91 DDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
L +H + VT V F + + +VS+S DGL +D+G
Sbjct: 151 LP-AHSDPVTAVDF-NRDGSLIVSSSYDGLCRIWDSG 185
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 133 (51.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 49/169 (28%), Positives = 72/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VKL+ P G+ +GH S + +S P P S S
Sbjct: 118 DWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWS-PHIPGCFASASG 176
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD +S V A EI + + LL G ++ WD RN +Q
Sbjct: 177 DQTLRIWDVKSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF 236
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 237 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDPLLETV 282
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 52/219 (23%), Positives = 96/219 (43%)
Query: 10 SQPKSQSCDNVNSIKRFGLKNSIQT-NFG----DDYVFEIVPKNDWSLMAVSLSTNVVKL 64
+QP Q+ +N K++ + FG + + + P D ++A + +
Sbjct: 192 TQPL-QAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSAD-GVLATGDCRRDIHV 249
Query: 65 YSPVT-GQYSGECK---GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR-SFHEVWS 119
++PV G + + + GHS +V + +S P+ VL SCS D TIR WD R S +
Sbjct: 250 WTPVEDGTWKVDQRPLAGHSQSVEDLQWS-PNERSVLASCSVDKTIRIWDCRASPQKACM 308
Query: 120 VT---AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR---NKKQVACLEESHVEDVTQV 173
+T A ++ S+ + ++ + G + WD R +KK +A + H + +T V
Sbjct: 309 LTCEDAHQSDVNVISWNRNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKH-HTDHITTV 367
Query: 174 HFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN 212
+ P + S D I +D + + D ++ N
Sbjct: 368 EWSPAEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQN 406
>TAIR|locus:2124377 [details] [associations]
symbol:PCN "AT4G07410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010311 "lateral root formation" evidence=IMP]
[GO:0010449 "root meristem growth" evidence=IMP] [GO:0035266
"meristem growth" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] [GO:0048569 "post-embryonic organ development"
evidence=IGI] [GO:2000012 "regulation of auxin polar transport"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0009790 GO:GO:0010449
GO:GO:0010311 GO:GO:0048366 GO:GO:0010073 GO:GO:0010305 KO:K14548
OMA:WSRTVQK GO:GO:2000012 EMBL:AY080667 EMBL:AY133764
IPI:IPI00543987 RefSeq:NP_567317.2 UniGene:At.21924
ProteinModelPortal:Q8RXU6 SMR:Q8RXU6 STRING:Q8RXU6 PRIDE:Q8RXU6
EnsemblPlants:AT4G07410.1 GeneID:826172 KEGG:ath:AT4G07410
TAIR:At4g07410 HOGENOM:HOG000015194 InParanoid:Q8RXU6
PhylomeDB:Q8RXU6 ProtClustDB:CLSN2690282 Genevestigator:Q8RXU6
Uniprot:Q8RXU6
Length = 815
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 41/121 (33%), Positives = 58/121 (47%)
Query: 97 LHSCSSDGTIRAWDTRSFHEVWSVTAG------SQEIFCFSFGGSTDYLLAAGCGS-QIQ 149
+ S SSDG IR WD S HEV+ +TAG S EI +S +L +G + +Q
Sbjct: 213 IFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSGDSTGTVQ 272
Query: 150 FWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN-DDDLLE 208
FWD + + +H DV + P++ N+V SA DG + + G N DL
Sbjct: 273 FWDSEHGTLLEA-HSNHKGDVNTLAAAPSH-NRVFSAGADGQVILYKLSGSTNGSQDLKP 330
Query: 209 S 209
S
Sbjct: 331 S 331
>UNIPROTKB|E1BBZ9 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:26118 KO:K10341 OMA:GHHNDVV
EMBL:DAAA02048546 IPI:IPI00718427 RefSeq:XP_002695684.2
RefSeq:XP_885171.4 UniGene:Bt.20080 ProteinModelPortal:E1BBZ9
Ensembl:ENSBTAT00000006593 GeneID:614851 KEGG:bta:614851
Uniprot:E1BBZ9
Length = 421
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/149 (24%), Positives = 64/149 (42%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H+ V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFA-PDGSLILVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G Q ++ +F + L + G + W+ + LE H
Sbjct: 198 WDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
DV F P+ + +AS D + +D
Sbjct: 257 HDVVACDFSPDGA-LLATASYDTRVYIWD 284
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 132 (51.5 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 34/150 (22%), Positives = 67/150 (44%)
Query: 40 YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
Y I D +A ++ ++ G+ +GH+ V + FS P++ +L +
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFS-PNS-QLLLT 229
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S DG ++ +D V +++ + + C +F + ++ + ++ WD +K +
Sbjct: 230 ASDDGHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCL 289
Query: 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVD 189
E H + V V + P N +KV SAS D
Sbjct: 290 HTFAE-HTDQVWGVRYSPGN-DKVASASED 317
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 42/173 (24%), Positives = 80/173 (46%)
Query: 35 NFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV-TGQYSGECK---GHSSTVNQISFSG 90
+ G+ + + P+ L+ N+ L++P +G + + + GH+ +V + +S
Sbjct: 212 HMGEGFALDWSPRVPGRLLTGDCQKNI-HLWTPTDSGSWHVDQRPFVGHTRSVEDLQWS- 269
Query: 91 PSTPHVLHSCSSDGTIRAWDTRSFHE----VWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146
P+ V SCS+D +IR WD R+ + + A + ++ S+ +LL+ G
Sbjct: 270 PTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFLLSGGDDG 329
Query: 147 QIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
++ WD R K VA ++ HV VT V + P + ++ D I +D
Sbjct: 330 ALKVWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 44/177 (24%), Positives = 80/177 (45%)
Query: 31 SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-QYSGECK---GHSSTVNQI 86
S + G+ + + P+ L+ N+ L++P G ++ + + GH+ +V +
Sbjct: 208 SFAGHMGEGFALDWSPRVPGRLLTGDCQKNI-HLWTPTDGGSWNVDQRPFVGHTRSVEDL 266
Query: 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSF--HEVWSVTAGSQE--IFCFSFGGSTDYLLAA 142
+S P+ V SCS+D +IR WD R+ TA + + + S+ +LL+
Sbjct: 267 QWS-PTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLLSG 325
Query: 143 GCGSQIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
G ++ WD R K VA ++ HV VT V + P + ++ D I +D
Sbjct: 326 GDDGTLKVWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 42/173 (24%), Positives = 79/173 (45%)
Query: 35 NFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-QYSGECK---GHSSTVNQISFSG 90
+ G+ + + P+ L+ N+ L++P G + + + GH+ +V + +S
Sbjct: 213 HMGEGFALDWSPRVPGRLLTGDCQKNI-HLWTPTDGGSWHVDQRPFVGHTRSVEDLQWS- 270
Query: 91 PSTPHVLHSCSSDGTIRAWDTRSFHE----VWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146
P+ V SCS+D +IR WD R+ + + TA ++ ++ +LL+ G
Sbjct: 271 PTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLLSGGDDG 330
Query: 147 QIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
++ WD R K VA ++ HV VT V + P + ++ D I +D
Sbjct: 331 ALKVWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADNQITQWD 382
>ZFIN|ZDB-GENE-041010-167 [details] [associations]
symbol:tssc1 "tumor suppressing subtransferable
candidate 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-041010-167 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314403
HOGENOM:HOG000264967 EMBL:BC083257 IPI:IPI00507270
RefSeq:NP_001006065.1 UniGene:Dr.108122 ProteinModelPortal:Q5XJP1
PRIDE:Q5XJP1 GeneID:450045 KEGG:dre:450045 CTD:7260
HOVERGEN:HBG052937 InParanoid:Q5XJP1 OrthoDB:EOG4C5CJP
NextBio:20833026 ArrayExpress:Q5XJP1 Uniprot:Q5XJP1
Length = 387
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 63/241 (26%), Positives = 106/241 (43%)
Query: 1 MEMEAEESQSQPKSQSCDNVNSIKRF-GLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLST 59
M E E + S +N +++ L NS + ++E P D + +SL+
Sbjct: 101 MPPEWESGNHESPDDSSNNPQTLELLCHLDNSAHGSMAC-VLWE--PMGDGKRV-ISLAE 156
Query: 60 NVVKLYSPVTGQYSGECKGHSSTVN---QISFS-GPSTPHVLHSCS-----SDGTIRAWD 110
N V L+ S+T+ Q+ F+ G +PH H+C+ +D IR WD
Sbjct: 157 NHVLLWDLQESSAKATISS-SATLEGKGQLKFTAGKWSPH--HNCTQLATANDTAIRGWD 213
Query: 111 TRSFHEVWSV-TAGSQEIFCFSFGGSTDYLLAAGCGS--QIQFWDWRN-KKQVACLEESH 166
RS +++ + A Q + F + Y LA+ CG +++FWD R+ + V CLEE H
Sbjct: 214 LRSMSQIYCIENAHGQLVRDLDFNPNKQYYLAS-CGDDCKVKFWDVRHISEPVKCLEE-H 271
Query: 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDT--------GGDINDDDLLESVINVGTSVG 218
V V + ++ +++AS D + + G ++DDDL + N G
Sbjct: 272 SHWVWSVRYNHSHDQLLLTASSDSRVILSNMVSISSEPFGHLVDDDDLSDPEENQQEDKG 331
Query: 219 K 219
K
Sbjct: 332 K 332
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 126 (49.4 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 45/209 (21%), Positives = 96/209 (45%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D S++A + VK+++ TG+ +GH + ++ IS+S + S S D TIR
Sbjct: 187 DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA--TIASGSDDKTIRL 244
Query: 109 WD--TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
W+ T H + ++ +F + L++ + WD R+ + + L +H
Sbjct: 245 WNVLTGKAHPTPFI-GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLP-AH 302
Query: 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTS-VGKVGFFGE 225
+ V+ + V + + S + DGL+ +DT + L ++++ V V F
Sbjct: 303 SDPVSGIDVVWDG-TLIASCATDGLVRIWDT----STGQCLRTLVHEDNPPVSSVKF-SP 356
Query: 226 TNKHLWCLTHIETLSIWDWKDGQNVASFE 254
K++ T + + +WD+ +G+ + +++
Sbjct: 357 NGKYVLAWTLDDCVRLWDYVEGRCLKTYQ 385
Score = 52 (23.4 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 333 QGRPAQSHGI-FGWTGGEDGRLCCW 356
Q P ++ G F +G EDG + CW
Sbjct: 403 QSIPGRTPGYAFAVSGSEDGAILCW 427
>TAIR|locus:2037005 [details] [associations]
symbol:SPA4 "SPA1-related 4" species:3702 "Arabidopsis
thaliana" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0006281
"DNA repair" evidence=RCA] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA] [GO:0048608 "reproductive
structure development" evidence=RCA] InterPro:IPR017986
InterPro:IPR000719 InterPro:IPR001680 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00069 Pfam:PF00400 PROSITE:PS50011
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004672 GO:GO:0009585
EMBL:AC022520 GO:GO:0080008 HOGENOM:HOG000029775 EMBL:AY040023
EMBL:AY133883 IPI:IPI00544468 PIR:E96571 RefSeq:NP_175717.1
RefSeq:NP_849802.1 UniGene:At.21898 ProteinModelPortal:Q94BM7
SMR:Q94BM7 IntAct:Q94BM7 STRING:Q94BM7 PaxDb:Q94BM7 PRIDE:Q94BM7
EnsemblPlants:AT1G53090.1 EnsemblPlants:AT1G53090.2 GeneID:841743
KEGG:ath:AT1G53090 GeneFarm:2950 TAIR:At1g53090 InParanoid:Q94BM7
OMA:WSINQGV PhylomeDB:Q94BM7 ProtClustDB:PLN00181
Genevestigator:Q94BM7 Uniprot:Q94BM7
Length = 794
Score = 137 (53.3 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 54/190 (28%), Positives = 84/190 (44%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
S +A S VV+++ Q E K H V I +S + P +L S S DG+++ W
Sbjct: 547 SQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSS-ADPTLLASGSDDGSVKLWS 605
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS-QIQFWDWRNKKQVACLEESHVED 169
+ ++ + I C F T LA G ++ ++D RN K C H +
Sbjct: 606 INQGVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKT 664
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFDTG---GDINDDDLLE-----SVIN-VGTSV--G 218
V+ V FV + + +VS+S D + +D IN+ L +V N VG SV G
Sbjct: 665 VSYVRFV--DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDG 722
Query: 219 KVGFFGETNK 228
+ ETN+
Sbjct: 723 YIATGSETNE 732
>ZFIN|ZDB-GENE-040426-2533 [details] [associations]
symbol:nup43 "nucleoporin 43" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2533
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K14305 CTD:348995 HOVERGEN:HBG052696
EMBL:BC066616 IPI:IPI00489133 RefSeq:NP_998057.1 UniGene:Dr.85700
ProteinModelPortal:Q6NYF4 STRING:Q6NYF4 PRIDE:Q6NYF4 GeneID:405828
KEGG:dre:405828 InParanoid:Q6NYF4 NextBio:20817791
ArrayExpress:Q6NYF4 Bgee:Q6NYF4 Uniprot:Q6NYF4
Length = 372
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 53/216 (24%), Positives = 96/216 (44%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR----SFHEVWSVTAGSQEIFCFSFGGS 135
SST++ ++F T VL + +S G ++ WD R S ++ S+T + C +
Sbjct: 166 SSTIHAVTFL--RTTEVL-TVNSIGQLKMWDFRQQSDSPAQILSLTGDRMPLHCVDKHPN 222
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L E+H ++ +VHF P+N N + + S DG +
Sbjct: 223 QQHIVATGGQDGMLCIWDVRQGNTPFSLTEAHSAEMWEVHFHPSNPNHLFTCSEDGSLLH 282
Query: 195 FDT--GGDINDDDLLESVINVGT-SVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
+++ G D++ LL+ N S + GE + +S W D +
Sbjct: 283 WESTSGSDVST--LLQKGWNSRVVSQSALSLAGENDS---------AVSAWLAGDSSK-S 330
Query: 252 SFENARSLASDSWTLDDVDYFVDCHYPG-EGENLWV 286
E L S + +++ +D C G +GE L++
Sbjct: 331 RLEATHMLPSQTLSVNSLDVLEQCLVCGTDGEALYI 366
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 136 (52.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+SLM + +K++ +G++ KGH++ V I F T ++L SCS+D TI+ W
Sbjct: 118 FSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFD--KTGNLLASCSADLTIKLW 175
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D +++ V ++ + C F S D L+++ I+ W+ + L H ED
Sbjct: 176 DFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLV-GH-ED 233
Query: 170 VTQVHFVPNNQNKVVSASVDGLICTFD 196
+ V + + + S S D I T++
Sbjct: 234 WVRKITVSEDGSCIASCSNDQTIKTWN 260
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 223 FGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
F K L + +T+ +WD G+ + + A +
Sbjct: 354 FHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHT 389
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 214 GTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSW 264
G VG+ G+ ++ +T+ IW+ G+ +A++ + D+W
Sbjct: 310 GNLVGQCGYLATGSRD-------KTIKIWELATGRCLATY-----IGHDNW 348
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 47/209 (22%), Positives = 80/209 (38%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ V FS + SC +D T++ + + ++ + A E+ C +F Y
Sbjct: 614 HTDAVYHACFSQDGQR--IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSY 671
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
+ +++ WD K V +E H E V HF N N ++ A+ G F
Sbjct: 672 IATCSADKKVKIWDSATGKLVHTYDE-HSEQVNCCHFT-NKSNHLLLAT--GSNDFFLKL 727
Query: 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
D+N + ++ SV F + C TL +WD + S R
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD-GTLRLWDVRSANERKSINVKRF 786
Query: 259 LASDSWTLDDVDYFVDC-HYPGEGENLWV 286
S +DV+ V C + +G+ + V
Sbjct: 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIV 815
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/177 (25%), Positives = 80/177 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH+ T+ +++S P L S S D T+ WD RS + T E S S
Sbjct: 58 GHTRTIRDVAWS-PCG-RFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKS 115
Query: 138 YLLAAGCGSQIQFWDWR----NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLIC 193
L A C W W ++ + A + +H +DV +V + PN ++ + SAS D I
Sbjct: 116 GALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPN-EDVLASASYDNTIQ 174
Query: 194 TFDTGGDINDDDL--LESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW-DWKDG 247
+ D+ D D +++ + ++V + F ++ C + +T+ IW ++K G
Sbjct: 175 LYRE--DLADSDWSSFDTLASHDSTVWSIAFDASGSRLASC-SDDQTVRIWQEYKPG 228
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 51/205 (24%), Positives = 91/205 (44%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS--FHEVWSVTAGSQEIFCFSFGG 134
+GH+ T+ +++S P + L SCS D TI W + F + ++ E+ C ++
Sbjct: 42 EGHTRTIRSVAWS-PCGNY-LASCSFDATICIWSKKDGDFECMATLEGHENEVKCVNWSS 99
Query: 135 STDYLLAAGCGSQIQFWDWR---NKKQVACLE--ESHVEDVTQVHFVPNNQNKVVSASVD 189
S YL A C W W ++ C H +DV V + P +N +VSAS D
Sbjct: 100 SGVYL--ASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPK-ENALVSASYD 156
Query: 190 GLICTFDTGGDINDD-DLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDW-KDG 247
I + +++DD + ++I ++V + F + C + L IW K G
Sbjct: 157 NTIKIYK---EVDDDWECSHTLIGHESTVWSLSFHSSGELFVSCGDD-KVLKIWKCLKSG 212
Query: 248 QNVASFENARSLAS-DSWTLDDVDY 271
+ + + ++A + + DVD+
Sbjct: 213 PSDVKWISICTIAGYHNRPIYDVDW 237
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/155 (25%), Positives = 66/155 (42%)
Query: 44 IVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPH-VLHSCSS 102
+ P N+W A V+K++ +G+ GH STV ++ S T H L SC
Sbjct: 180 VEPGNEW--FATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVS---TKHPYLFSCGE 234
Query: 103 DGTIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161
D ++ WD +++V G ++ + + D L +G S + WD R K V
Sbjct: 235 DRQVKCWDLE-YNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHT 293
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
L H V V N ++++ S D + +D
Sbjct: 294 LT-GHTNTVASVVAQATNP-QIITGSHDSTVRLWD 326
>DICTYBASE|DDB_G0283265 [details] [associations]
symbol:mkkA "octicosapeptide/Phox/Bem1p
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0009653
"anatomical structure morphogenesis" evidence=IMP] [GO:0005938
"cell cortex" evidence=IDA] [GO:0004709 "MAP kinase kinase kinase
activity" evidence=IEA;ISS] [GO:0000186 "activation of MAPKK
activity" evidence=IEA;ISS] [GO:0000165 "MAPK cascade"
evidence=ISS] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030435 "sporulation resulting in formation of a cellular
spore" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] GenBank:AAFI02000052
Ncbi:EAL65773
Length = 1267
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/141 (25%), Positives = 65/141 (46%)
Query: 62 VKLYSPVTGQYSGECKGHSSTV-----NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116
++L+ TG +GH+ + +Q++ G H++ S S D T WDTRS +
Sbjct: 1088 IQLWDAETGSCLSTLRGHTGGIYCVKTDQVATHGNGYNHLVVSASVDKTSNVWDTRSSSK 1147
Query: 117 VWSVTAGSQEIFC-FSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHF 175
V S T ++++ C + F ++ C I+ WD K ++ S V
Sbjct: 1148 VRSFTQHTEDVLCCYVFDQK---VVTGSCDGTIKLWDIGTGKTISTFIPSETRQKNYVWT 1204
Query: 176 VPNNQNKVVSASVDGLICTFD 196
V +Q+K++S+ G+I +D
Sbjct: 1205 VQFDQSKIISSGKTGIIRIWD 1225
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 47/169 (27%), Positives = 72/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VKL+ P G+ +GH S + +S P P S S
Sbjct: 118 DWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWS-PHIPGCFASASG 176
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ + A EI + + LL G ++ WD RN +Q
Sbjct: 177 DQTLRIWDVKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF 236
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 237 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDSLLETV 282
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/227 (21%), Positives = 92/227 (40%)
Query: 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107
N+W A + ++K++ + + GH +++ I S P+ L SC D ++
Sbjct: 298 NEW--FATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKIS-KKNPY-LFSCGEDNRVK 353
Query: 108 AWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + ++C S S D L++ G + ++ WD R K V L H
Sbjct: 354 CWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLS-GHT 412
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN 227
V + + + +VVS S D +I +D +N+ S+ + S+ +
Sbjct: 413 GTVMSI-CSQSVEPQVVSGSQDKMIRLWD----LNNGKCRISLTHHKKSIRSLSI--HPF 465
Query: 228 KHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274
++ +C + + +W D + + S+ + S D YF D
Sbjct: 466 EYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQD-PYFND 511
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 48/227 (21%), Positives = 92/227 (40%)
Query: 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107
N+W A + ++K++ + + GH +++ I S P+ L SC D ++
Sbjct: 298 NEW--FATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKIS-KKNPY-LFSCGEDNRVK 353
Query: 108 AWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + ++C S S D L++ G + ++ WD R K V L H
Sbjct: 354 CWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSVFVLS-GHT 412
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN 227
V + + + +VVS S D +I +D +N+ S+ + S+ +
Sbjct: 413 GTVMSI-CSQSVEPQVVSGSQDKMIRLWD----LNNGKCRISLTHHKKSIRSLSI--HPF 465
Query: 228 KHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274
++ +C + + +W D + + S+ + S D YF D
Sbjct: 466 EYSFCSCGTDNVKVWCGADAEFDRNITGFNSIINCSLIKQD-PYFND 511
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/173 (23%), Positives = 79/173 (45%)
Query: 35 NFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-QYSGECK---GHSSTVNQISFSG 90
+ G+ + + P+ L+ N+ L++P G + + + GH+ +V + +S
Sbjct: 207 HMGEGFALDWSPRVSGRLLTGDCQKNI-HLWTPTDGGSWHVDQRPFMGHTRSVEDLQWS- 264
Query: 91 PSTPHVLHSCSSDGTIRAWDTRSFHE----VWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146
P+ V SCS+D +IR WD R+ + + +A ++ ++ +LL+ G
Sbjct: 265 PTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFLLSGGDDG 324
Query: 147 QIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
++ WD R K VA ++ HV +T V + P + ++ D I +D
Sbjct: 325 ALKIWDLRQFKSGSPVATFKQ-HVAPITSVEWHPQDSGVFAASGADNQITQWD 376
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 47/169 (27%), Positives = 70/169 (41%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + KL+ P G+ KGH + +S P P S S
Sbjct: 116 DWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWS-PHIPGCFASASG 174
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ + A EI + + LL G ++ WD RN +Q
Sbjct: 175 DQTLRIWDVKAPGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVF 234
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
+ H V +V F P + + S S D + +D + LLE+V
Sbjct: 235 ILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFS---KPNPLLETV 280
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/206 (24%), Positives = 88/206 (42%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GHS +N +S S L S S D ++R WD + S + ++F SF
Sbjct: 70 GHSQAINDVSISSDGL-FAL-SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNR 127
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN-NQNKVVSASVDGLICTFD 196
+++A I+ W+ + + ++ H + +T V F P+ NQ +VS D L+ ++
Sbjct: 128 QIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWN 187
Query: 197 TGG-DINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE--TLSIWDWKDGQNVASF 253
D+N + LE V +V + G C + + +WD K+G+++ S
Sbjct: 188 LKNCDLNKN--LEGHTGVLNTV-TISPDGSL-----CASGGKDGVAKLWDVKEGKHLYSL 239
Query: 254 ENARSLAS------DSWTLDDVDYFV 273
E ++ S D W D F+
Sbjct: 240 ETGSTINSLCFSPCDYWLCAATDRFI 265
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 50/206 (24%), Positives = 88/206 (42%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GHS +N +S S L S S D ++R WD + S + ++F SF
Sbjct: 70 GHSQAINDVSISSDGL-FAL-SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNR 127
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN-NQNKVVSASVDGLICTFD 196
+++A I+ W+ + + ++ H + +T V F P+ NQ +VS D L+ ++
Sbjct: 128 QIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWN 187
Query: 197 TGG-DINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE--TLSIWDWKDGQNVASF 253
D+N + LE V +V + G C + + +WD K+G+++ S
Sbjct: 188 LKNCDLNKN--LEGHTGVLNTV-TISPDGSL-----CASGGKDGVAKLWDVKEGKHLYSL 239
Query: 254 ENARSLAS------DSWTLDDVDYFV 273
E ++ S D W D F+
Sbjct: 240 ETGSTINSLCFSPCDYWLCAATDRFI 265
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/179 (24%), Positives = 82/179 (45%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GH ++VN + +S S ++ + SSD T+R WD + H + + A + I C + G
Sbjct: 344 RGHLASVNSVQYS--SKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGK- 400
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGL--ICT 194
++++ I+ ++ + K + L+ H + + V F N K+VS DG I
Sbjct: 401 -FIVSGSSDLTIRIFEASSGKLLRMLQ-GHEDLIRTVRF---NDEKIVSGGYDGTVRIWN 455
Query: 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF 253
F+TG V++ + G + + + C TH + +W++ DG + F
Sbjct: 456 FNTGEQ-------HCVLHNSRNSRVFGLQFDHRRIIAC-THSSEILVWNFDDGLDCTFF 506
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/177 (23%), Positives = 76/177 (42%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ +L + S DGT WD S + S ++ C S
Sbjct: 152 HTNYLSACSFTNSDMQQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + + E +H D+ V + P+ + S S D +D
Sbjct: 211 NTFVSGGCDKKAMVWDMRSGQCIQAFE-THESDINSVRYYPSG-DAFASGSDDATCRLYD 268
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 269 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 320
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 52/212 (24%), Positives = 95/212 (44%)
Query: 41 VFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
V+ I N + +A KL+S TG+ +GH++ + +SF+ ST V+ +
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQST--VVAT 194
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S D T + WD +S EV ++T EI SF S D ++ + WD ++V
Sbjct: 195 GSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV 254
Query: 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD-TGGDI------NDDDLLES--- 209
L H +++ F + + +++ S+D +D T G +DD++L+S
Sbjct: 255 HTLI-GHCAEISSALF-SWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD 312
Query: 210 ----VINVGTSVGKVGFFGETNKHLWCLTHIE 237
+I ++ G + T + C+T +E
Sbjct: 313 YTGKLIATASADGTARVYNATTRK--CITKLE 342
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 63/239 (26%), Positives = 101/239 (42%)
Query: 28 LKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87
LK++I+ + D+V + D L+A + +KL+ T GHS+ V +
Sbjct: 147 LKHTIEGH--SDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLV 204
Query: 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ 147
FS P +L S S+D TI+ WD S ++ S +I +F + L + +
Sbjct: 205 FS-PDG-RLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDAT 262
Query: 148 IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLL 207
I+ WD L+ H + V V F P++Q + S S D I +D I L
Sbjct: 263 IKLWDTATGSFRHTLK-GHSDMVLSVVFSPDSQ-LLESGSGDNTIKLWDPATGI----LK 316
Query: 208 ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF--ENARSLASDSW 264
S+ G V + F E + +T++ T SI W G S + A S+ + W
Sbjct: 317 HSMRTPGI-VRSIEFSIELPQ---LITNLGTFSIQAWHTGYPSRSSGKKTAVSVQRNRW 371
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 37/127 (29%), Positives = 64/127 (50%)
Query: 27 GLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQI 86
GLK+++ + ++V +V D L+A + +KL+ P +G +GHS+ + +
Sbjct: 188 GLKHTLGGH--SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESL 245
Query: 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146
+FS P+ +L S SSD TI+ WDT + ++ S + F + LL +G G
Sbjct: 246 AFS-PNG-QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQ-LLESGSGD 302
Query: 147 Q-IQFWD 152
I+ WD
Sbjct: 303 NTIKLWD 309
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 41/177 (23%), Positives = 76/177 (42%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ +L + S DGT WD S + S ++ C S
Sbjct: 194 HTNYLSACSFTNSDMQQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 252
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + + E +H D+ V + P+ + S S D +D
Sbjct: 253 NTFVSGGCDKKAMVWDMRSGQCIQAFE-THESDINSVRYYPSG-DAFASGSDDATCRLYD 310
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 311 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 362
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 38/156 (24%), Positives = 77/156 (49%)
Query: 58 STNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117
S +KL++P +G GH+ V + S S+ +++ S S D +I WD + V
Sbjct: 37 SDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSS-YIV-SASLDKSIIYWDVSTGAPV 94
Query: 118 WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK--QVACLEESHVEDVTQVHF 175
+ + + + C F + ++ G + + WD R ++ V ++E+ + +T V
Sbjct: 95 RRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEAR-DCITTV-- 151
Query: 176 VPNNQNKVVSASVDGLICTFDTG-GDINDDDLLESV 210
N+N++ +AS+DG + T+D G++ D + E +
Sbjct: 152 -ATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPI 186
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 44/148 (29%), Positives = 62/148 (41%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VKL+ P G+ KGH S + +S P P S S
Sbjct: 118 DWSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWS-PHIPGCFASASG 176
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ V A EI + + LL G ++ WD RN +Q
Sbjct: 177 DQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF 236
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVD 189
H + +V F P + + S S D
Sbjct: 237 ELLGHTYAIRRVKFSPFYASVLASCSYD 264
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 127 (49.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 53 MAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR 112
+ S + VK+++ GH VN ++S S V + S D T++ ++
Sbjct: 94 LGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIV--TASDDKTLKIYEVP 151
Query: 113 SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQ 172
+ ++ + +FC +F + +++ ++ WD R V L +H + V+
Sbjct: 152 TVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLP-AHSDPVSA 210
Query: 173 VHFVPNNQNKVV-SASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLW 231
V F N ++ S S DGL+ +DT N + V + V V F K++
Sbjct: 211 VSF--NRDGSLITSGSYDGLVRIWDTA---NGQCVKTLVDDENPPVAFVKF-SPNGKYIL 264
Query: 232 CLTHIETLSIWDWKDGQNVASFE 254
TL +WD+ G+ + ++
Sbjct: 265 SSNLDNTLKLWDFGKGKTLKQYQ 287
Score = 125 (49.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 48 ND--WSLMAVSLST----NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS 101
ND WS + S+ T +K+Y T + + KGH++ V +F+ P + V+ S S
Sbjct: 125 NDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN-PQSSLVV-SGS 182
Query: 102 SDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161
D ++R WD R+ V ++ A S + SF + + ++ WD N + V
Sbjct: 183 FDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKT 242
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
L + V V F PN + ++S+++D + +D G
Sbjct: 243 LVDDENPPVAFVKFSPNGKY-ILSSNLDNTLKLWDFG 278
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/132 (26%), Positives = 65/132 (49%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGEC-KGHSSTVNQISFSG-----PSTPHVLHSCSS 102
D ++A N ++L+ P +GQ G+ +GHS + +S+ P + L S S
Sbjct: 197 DGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSK 256
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVAC 161
DGTI+ WDT S ++++ + + C +GG LL +G + ++ WD ++ +
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG--LLYSGSHDRTVRVWDINSQGRCIN 314
Query: 162 LEESHVEDVTQV 173
+ +SH V +
Sbjct: 315 ILKSHAHWVNHL 326
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/149 (23%), Positives = 66/149 (44%)
Query: 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107
+D S + + V+ + TG+ + HSS VN + P ++ S S DGT +
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLII-SGSDDGTAK 164
Query: 108 AWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD R + + +I SF + D + G + ++ WD R + LE H
Sbjct: 165 LWDMRQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLE-GHQ 222
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ +T + P+ + +++ +D +C +D
Sbjct: 223 DTITGMSLSPDG-SYLLTNGMDNKLCVWD 250
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 125 (49.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 46/169 (27%), Positives = 71/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VK++ P G +GH S + +S P P S S
Sbjct: 113 DWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWS-PHIPGCFASASG 171
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ + A EI + + LL G ++ WD RN +Q
Sbjct: 172 DQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVF 231
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 232 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDPLLETV 277
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 47/169 (27%), Positives = 72/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VKL+ P G+ +GH S + +S P P S S
Sbjct: 118 DWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWS-PHIPGCFASSSG 176
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ V A EI + + L+ G ++ WD RN +Q
Sbjct: 177 DQTLRIWDVKTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQPVF 236
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 237 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDPLLETV 282
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH VN I++S S V S S D T++ ++ + ++ + +FC +F +
Sbjct: 127 GHKLGVNDIAWSSDSRCVV--SASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVV-SASVDGLICTFD 196
+++ ++ WD + + L +H + V+ V F N ++ S S DGL+ +D
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLP-AHSDPVSAVSF--NRDGSLIASGSYDGLVRIWD 241
Query: 197 TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF--- 253
T N + V + V V F K++ TL +WD+ G+ + +
Sbjct: 242 TA---NGQCIKTLVDDENPPVAFVKF-SPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Query: 254 ENAR 257
EN++
Sbjct: 298 ENSK 301
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 38/157 (24%), Positives = 76/157 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
V +I +D S VS S + +K++ VT + + KGH++ V +F+ P + V+ S
Sbjct: 132 VNDIAWSSD-SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN-PQSSLVV-S 188
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S D ++R WD ++ + ++ A S + SF + + ++ WD N + +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
L + V V F PN + ++++++D + +D
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKY-ILASNLDSTLKLWD 284
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 43/184 (23%), Positives = 81/184 (44%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH VN I++S S V S S D T++ ++ + ++ + +FC +F +
Sbjct: 127 GHKLGVNDIAWSSDSRCVV--SASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSS 184
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVV-SASVDGLICTFD 196
+++ ++ WD + + L +H + V+ V F N ++ S S DGL+ +D
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLP-AHSDPVSAVSF--NRDGSLIASGSYDGLVRIWD 241
Query: 197 TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF--- 253
T N + V + V V F K++ TL +WD+ G+ + +
Sbjct: 242 TA---NGQCIKTLVDDENPPVAFVKF-SPNGKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Query: 254 ENAR 257
EN++
Sbjct: 298 ENSK 301
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 38/157 (24%), Positives = 76/157 (48%)
Query: 41 VFEIVPKNDWSLMAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
V +I +D S VS S + +K++ VT + + KGH++ V +F+ P + V+ S
Sbjct: 132 VNDIAWSSD-SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFN-PQSSLVV-S 188
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S D ++R WD ++ + ++ A S + SF + + ++ WD N + +
Sbjct: 189 GSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
L + V V F PN + ++++++D + +D
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKY-ILASNLDSTLKLWD 284
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 40/149 (26%), Positives = 65/149 (43%)
Query: 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107
N+W + + +T +K++ TG+ GH TV ++ S P+ L S S D T++
Sbjct: 152 NEWFITGSNDTT--MKVWDLATGKLKTTLAGHVMTVRDVAVSDRH-PY-LFSVSEDKTVK 207
Query: 108 AWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + S + D + AG S I+ WD R + V L H
Sbjct: 208 CWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVITLV-GHK 266
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ QV P + +VVS+S D + +D
Sbjct: 267 GPINQVQCTPVDP-QVVSSSTDATVRLWD 294
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 44/177 (24%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 152 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 209
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + V E +H DV V + P+ + S S D +D
Sbjct: 210 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSG-DAFASGSDDATCRLYD 267
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 268 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 319
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 34/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF T +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HTGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 126 (49.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 55 VSLSTNV-VKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113
VS S + +K++ TG + KGH+ +V ISF T +L SCS+D TI+ WD +
Sbjct: 124 VSASEDATIKVWDHETGDFERTLKGHTDSVQDISFD--HTGKLLASCSADMTIKLWDFQG 181
Query: 114 FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQV 173
F + ++ + + + D++++A I+ W+ V H E V V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFT-GHREWVRMV 240
Query: 174 HFVPNNQNKVVSAS 187
PN ++++S
Sbjct: 241 R--PNQDGTLIASS 252
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH V+ + +S + S S D TIR WD S + S G++ C S+
Sbjct: 255 GHMEAVSSVLWSDAEE---ICSASWDHTIRVWDVES-GSLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 35/122 (28%), Positives = 56/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH V+ + +S + S S D TIR WD S + S G++ C S+
Sbjct: 255 GHMEAVSSVLWSDAEE---ICSASWDHTIRVWDVES-GSLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>UNIPROTKB|E1C370 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803
EMBL:AADN02025353 IPI:IPI00600408 RefSeq:XP_419667.2
UniGene:Gga.8247 ProteinModelPortal:E1C370
Ensembl:ENSGALT00000020225 GeneID:421628 KEGG:gga:421628
NextBio:20824366 Uniprot:E1C370
Length = 374
Score = 125 (49.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/129 (24%), Positives = 64/129 (49%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH----EVWSVTAGSQEIFCFSFGGS 135
SST++ ++F T +L + +S G ++ WD R +++S+T + C +
Sbjct: 171 SSTLHAVTFL--RTTEIL-TVNSIGQLKIWDFRQQRNEPAQIFSLTGDRVPLHCVDRHPN 227
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L +H ++ +VHF P+N + + + S DG +
Sbjct: 228 QQHIVATGGQDGMLSIWDIRQGTMPVSLLNAHEAEMWEVHFHPSNPDHLFTCSEDGSLWH 287
Query: 195 FDTGGDIND 203
+DT D+++
Sbjct: 288 WDTSTDVSE 296
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 35/153 (22%), Positives = 61/153 (39%)
Query: 44 IVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD 103
+ P N+W A +K+++ TG GH STV ++ S P P+ L SC D
Sbjct: 151 VEPNNEW--FASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVS-PRHPY-LFSCGED 206
Query: 104 GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
++ WD + + ++ + D L+ G + WD R + + L
Sbjct: 207 KMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLS 266
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V V +V++ S+D + +D
Sbjct: 267 -GHTGTVADVQ-CQEADPQVITGSLDATVRLWD 297
>MGI|MGI:101848 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein),
beta 5" species:10090 "Mus musculus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0032794 "GTPase activating protein binding" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0044297 "cell body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:U69145 InterPro:IPR001632 MGI:MGI:101848
GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ EMBL:L34290 EMBL:BC016135
IPI:IPI00127930 IPI:IPI00378017 PIR:A54969 RefSeq:NP_034443.1
RefSeq:NP_619733.1 UniGene:Mm.17604 PDB:2PBI PDBsum:2PBI
ProteinModelPortal:P62881 SMR:P62881 DIP:DIP-264N IntAct:P62881
STRING:P62881 PhosphoSite:P62881 PaxDb:P62881 PRIDE:P62881
Ensembl:ENSMUST00000076889 GeneID:14697 KEGG:mmu:14697
UCSC:uc009qry.1 InParanoid:P62881 EvolutionaryTrace:P62881
NextBio:286651 Bgee:P62881 Genevestigator:P62881
GermOnline:ENSMUSG00000032192 Uniprot:P62881
Length = 395
Score = 125 (49.1 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 44/177 (24%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 194 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 251
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + V E +H DV V + P+ + S S D +D
Sbjct: 252 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDVNSVRYYPSG-DAFASGSDDATCRLYD 309
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 310 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 361
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 38/131 (29%), Positives = 57/131 (43%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P W +A + + VKL+ G+ E GHS VN + F PS ++L S SSD T
Sbjct: 157 PDGKW--LASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH-PSE-YLLASGSSDRT 212
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK--QVACLE 163
IR WD FH V + + + C F L G ++ + W ++ V +
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNPD-GCCLYGGFQDSLRVYGWEPERCFDVVVVN 271
Query: 164 ESHVEDVTQVH 174
V D++ H
Sbjct: 272 WGKVADLSVCH 282
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 124 (48.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 69 TGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIF 128
TGQ KGH + VN + S +L S S D TI+ WD R H ++ + Q +
Sbjct: 129 TGQRQRRFKGHGNFVNSVQGSRRGQ-QLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VT 186
Query: 129 CFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188
FG + + +++ G ++++ WD R K+ V H + +T + P + +++ ++
Sbjct: 187 AVCFGDTGEQVISGGIDNEVKIWDIR-KQAVLHHLRGHSDTITGMSLSPEG-DFILTNAM 244
Query: 189 DGLICTFD 196
D + +D
Sbjct: 245 DNTLRVWD 252
>UNIPROTKB|A5PJS1 [details] [associations]
symbol:GNB5 "GNB5 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 OrthoDB:EOG4XWFXZ
EMBL:DAAA02028995 EMBL:DAAA02028996 EMBL:BC142218 IPI:IPI00695391
RefSeq:NP_001092540.1 UniGene:Bt.48572 SMR:A5PJS1 MINT:MINT-6824860
STRING:A5PJS1 Ensembl:ENSBTAT00000004896 GeneID:535365
KEGG:bta:535365 InParanoid:A5PJS1 NextBio:20876717 Uniprot:A5PJS1
Length = 353
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 43/177 (24%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 152 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 209
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + V E +H D+ V + P+ + S S D +D
Sbjct: 210 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDINSVRYYPSG-DAFASGSDDATCRLYD 267
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 268 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 319
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 128 (50.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 47 KNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTI 106
K++ + +A S +V ++ T Q E + H + FS + P +L S S D +
Sbjct: 430 KHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSR-TEPSMLVSGSDDCKV 488
Query: 107 RAWDTRSFHEVWSVTAGSQEIFCFSFG-GSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
+ W TR V ++ + I C + GS++Y+ I ++D RN Q +
Sbjct: 489 KVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSG 547
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H + V+ V F+ NN+ + SAS D + +D
Sbjct: 548 HKKAVSYVKFLSNNE--LASASTDSTLRLWD 576
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 123 (48.4 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 50/186 (26%), Positives = 86/186 (46%)
Query: 16 SCDNVNSIKRFGLKNS--IQTNFGDDY-VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQY 72
+C + S+K + + ++T G Y V + D S + S V L+ +GQ
Sbjct: 42 TCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQV 101
Query: 73 SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH-EVWSVTAGSQEIFCFS 131
+ + +GH+ VN + F+ +T V+ S S DGT+R WDTRS E + SQ+ S
Sbjct: 102 TRKLRGHAGKVNCVQFNEEAT--VMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGIS-S 158
Query: 132 FGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV-EDVTQVHFVPNNQNKVVSASVDG 190
S LL +++ +D R + L+ ++ +T V F + Q +S+S+D
Sbjct: 159 LKVSEHELLTGSVDGRVRRYDLR----MGQLQVDYIGSPITCVCFSRDGQC-TLSSSLDS 213
Query: 191 LICTFD 196
+ D
Sbjct: 214 TVRLLD 219
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 125 (49.1 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 41 VFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
V+ I N + +A KL+S TG+ +GH++ + +SF+ ST ++ +
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST--LVAT 194
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S D T + WD ++ EV+++ S EI SF S D ++ + WD ++V
Sbjct: 195 GSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV 254
Query: 160 ACLEESHVEDVTQVHFVPN-NQNKVVSASVDGLICTFD-TGGDI------NDDDLLES 209
L H +++ F N + + +++ S+D +D T G +DD++L+S
Sbjct: 255 NILI-GHCAEISSASF--NWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS 309
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 47/198 (23%), Positives = 78/198 (39%)
Query: 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
+L+A KL+ G+ +GHS+ + +SF+ S ++ S D T+ WD
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFN-TSGDRIITG-SFDHTVVVWD 247
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV 170
+ +V + EI SF +L + WD N K VA L H +++
Sbjct: 248 ADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT-GHDDEI 306
Query: 171 TQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHL 230
F + + +AS DG F + + + K+ F + N HL
Sbjct: 307 LDSCFDYTGK-LIATASADGTARIFSAA----TRKCIAKLEGHEGEISKISFNPQGN-HL 360
Query: 231 WCLTHIETLSIWDWKDGQ 248
+ +T IWD + GQ
Sbjct: 361 LTGSSDKTARIWDAQTGQ 378
Score = 116 (45.9 bits), Expect = 0.00067, P = 0.00067
Identities = 31/142 (21%), Positives = 62/142 (43%)
Query: 63 KLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122
KL+ +G+ +GH + V I+F+ P + S D T + W + +
Sbjct: 117 KLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG-SFDKTCKLWSVETGKCYHTFRG 175
Query: 123 GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK 182
+ EI C SF + + + + WD +N ++V L H ++ + F + ++
Sbjct: 176 HTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISLSFNTSG-DR 233
Query: 183 VVSASVDGLICTFD--TGGDIN 202
+++ S D + +D TG +N
Sbjct: 234 IITGSFDHTVVVWDADTGRKVN 255
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 38/151 (25%), Positives = 59/151 (39%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P N+W + +K++ TG GH V ++ S T + S D
Sbjct: 186 PSNEW--FCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT--YMFSAGDDKQ 241
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
++ WD + S ++C + + D LL G S + WD R K Q+ L
Sbjct: 242 VKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALS-G 300
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V V P + +VV+ S D I +D
Sbjct: 301 HDNTVCSVFTRPTDP-QVVTGSHDTTIKFWD 330
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 54/212 (25%), Positives = 86/212 (40%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH S V ++ P T VL + D R WD R+ ++++++ G C F TD
Sbjct: 258 GHLSGVYCLALH-P-TLDVLLTGGRDSVCRVWDIRTKMQIFALS-GHDNTVCSVFTRPTD 314
Query: 138 YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ G + I+FWD R K ++ L H + V + P +N SAS D
Sbjct: 315 PQVVTGSHDTTIKFWDLRYGKTMSTLTH-HKKSVRAMTLHPK-ENAFASASADNTKKFSL 372
Query: 197 TGGDINDDDLLE--SVINVGTSVGKVGFF--GETNKHLWCLTHIETLSIWDWKDGQNVAS 252
G+ + L + ++IN +V + G G N +W WDWK G S
Sbjct: 373 PKGEFCHNMLSQQKTIINA-MAVNEDGVMVTGGDNGSIW---------FWDWKSGH---S 419
Query: 253 FENARSLASDSWTLDDVDYFVDCHYPGEGENL 284
F+ + ++ + + C Y G L
Sbjct: 420 FQQSETIVQPGSLESEAGIYAAC-YDNTGSRL 450
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 43 EIVPKNDWSLMAVSLST--NVVKLYSPVTGQY 72
EI P SL +SL + ++L+SPV GQ+
Sbjct: 7 EIEPIEAQSLKKLSLKSLKRSLELFSPVHGQF 38
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 125 (49.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH+ ++ + +S + S S D TIR WD S + S G++ C S+
Sbjct: 255 GHTEAISSVLWSDAEE---ICSASWDHTIRVWDVES-GGLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>UNIPROTKB|F1P643 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000776 "kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0000776 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K14305 CTD:348995 OMA:QWTAAHY
GeneTree:ENSGT00390000004803 EMBL:AAEX03000265 RefSeq:XP_541148.2
ProteinModelPortal:F1P643 Ensembl:ENSCAFT00000000620 GeneID:484031
KEGG:cfa:484031 Uniprot:F1P643
Length = 380
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 46/193 (23%), Positives = 86/193 (44%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAGSQEIFCFSFGGS 135
SST++ ++F TP +L + +S G ++ WD R ++ S+T + C +
Sbjct: 172 SSTLHAVTFL--RTPEIL-TVNSIGQLKIWDFRKQGNEPSQILSLTGDRVPLHCVDRHPN 228
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L ++H ++ +VHF P+N + + + S DG +
Sbjct: 229 QQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWH 288
Query: 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW----DWKDGQNV 250
+D D+ + S+ N G G+ F + H +S W KD +
Sbjct: 289 WDASTDVPEKS---SLFNQG---GRNSTFLSHSISNQANVHQSLISSWLSTDPAKDRIEI 342
Query: 251 ASFENARSLASDS 263
S +R+L+ +S
Sbjct: 343 TSLLPSRTLSVNS 355
>UNIPROTKB|F1S7T5 [details] [associations]
symbol:NUP43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 KO:K14305
CTD:348995 OMA:QWTAAHY GeneTree:ENSGT00390000004803 EMBL:CU571230
RefSeq:XP_001929004.1 UniGene:Ssc.52499 ProteinModelPortal:F1S7T5
Ensembl:ENSSSCT00000004540 GeneID:100154567 KEGG:ssc:100154567
Uniprot:F1S7T5
Length = 380
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 43/189 (22%), Positives = 85/189 (44%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAGSQEIFCFSFGGS 135
SST++ ++F TP +L + +S G ++ WD R ++ S+T + C +
Sbjct: 172 SSTLHAVTFL--RTPEIL-TVNSIGQLKIWDFRQQGNEPSQILSLTGDRAPLHCVDRHPN 228
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L ++H ++ +VHF P+N + + + S DG +
Sbjct: 229 QQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWH 288
Query: 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254
+D D+ + L ++ +TN H ++ LS +D + S
Sbjct: 289 WDASTDVPEKSSLFHQGGRSSTFLSHSISNQTNVHQSLIS--SWLSTDPARDRIEITSLL 346
Query: 255 NARSLASDS 263
+R+L+ +S
Sbjct: 347 PSRTLSVNS 355
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 55 VSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113
VS T+ V+++ TG K H+ VN + + P ++ S S DGT+ D RS
Sbjct: 95 VSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRG-PQMICSASDDGTVMVHDMRS 153
Query: 114 FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQV 173
Q+ +F + D ++ G +QI+ WD + V + H + +T +
Sbjct: 154 KEAAKKFICKYQQT-AVTFNDAADNVICGGIDNQIKVWDML-RNDVRYVLSGHRDTITSL 211
Query: 174 HFVPNNQNKVVSASVDGLICTFD 196
V +N N ++S S+D + ++D
Sbjct: 212 S-VSHNGNFLLSNSMDCSLMSWD 233
>UNIPROTKB|O14775 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0003924 "GTPase activity" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0007165
"signal transduction" evidence=NAS] [GO:0005834 "heterotrimeric
G-protein complex" evidence=NAS] [GO:0006184 "GTP catabolic
process" evidence=NAS] Reactome:REACT_13685 Reactome:REACT_604
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005634
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
Pathway_Interaction_DB:txa2pathway
Pathway_Interaction_DB:cone_pathway
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
GO:GO:0005834 HOGENOM:HOG000176356 HOVERGEN:HBG000188
InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE
EMBL:AF017656 EMBL:AL117471 EMBL:AF501885 EMBL:AF300650
EMBL:BC013997 IPI:IPI00151607 IPI:IPI00745232 IPI:IPI00967497
PIR:T17256 RefSeq:NP_006569.1 RefSeq:NP_057278.2 UniGene:Hs.155090
ProteinModelPortal:O14775 SMR:O14775 IntAct:O14775
MINT:MINT-1399610 STRING:O14775 PhosphoSite:O14775 PaxDb:O14775
PRIDE:O14775 DNASU:10681 Ensembl:ENST00000261837
Ensembl:ENST00000358784 Ensembl:ENST00000396335 GeneID:10681
KEGG:hsa:10681 UCSC:uc002abr.1 UCSC:uc002abs.1 CTD:10681
GeneCards:GC15M052413 HGNC:HGNC:4401 HPA:CAB032353 HPA:HPA041942
MIM:604447 neXtProt:NX_O14775 PharmGKB:PA28780 InParanoid:O14775
OrthoDB:EOG4XWFXZ PhylomeDB:O14775 ChiTaRS:GNB5 GenomeRNAi:10681
NextBio:40605 ArrayExpress:O14775 Bgee:O14775 CleanEx:HS_GNB5
Genevestigator:O14775 GermOnline:ENSG00000069966 Uniprot:O14775
Length = 395
Score = 124 (48.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 43/177 (24%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 194 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 251
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + V E +H D+ V + P+ + S S D +D
Sbjct: 252 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDINSVRYYPSG-DAFASGSDDATCRLYD 309
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 310 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 361
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 127 (49.8 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 52/194 (26%), Positives = 84/194 (43%)
Query: 12 PKSQSCDNVNSIKRFGLKNSIQTNFG------DDYVFEIV--PKNDWSLMAVSLSTNVVK 63
P+ + +S F L N + NF D V I+ DW +++ S N+ K
Sbjct: 135 PEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDW-MVSGDDSGNI-K 192
Query: 64 LYSPVTGQYSGECKGHS-STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122
+ P K H S + +SFS P T L SC+ D I+ WD E +
Sbjct: 193 YWQPNMNNVK-IFKAHEQSKIRGLSFS-P-TDLKLASCADDKIIKIWDFARCTEDNQLVG 249
Query: 123 GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK 182
++ C S+ +++ G + I+ WD ++ + + L H V++V + N N
Sbjct: 250 HGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLH-GHKSTVSKVEWNQNG-NW 307
Query: 183 VVSASVDGLICTFD 196
+VSAS D L+ FD
Sbjct: 308 IVSASSDQLLKVFD 321
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 122 (48.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/178 (19%), Positives = 78/178 (43%)
Query: 19 NVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG 78
N+ ++ ++S+ T ++ I D +A ++ ++ TG+ +G
Sbjct: 131 NIFGVESGKKEHSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ + ++FS S +L + S DG I+ +D + + +++ + +F +
Sbjct: 189 HAMPIRSLTFSPDS--QLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTH 246
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+++ I+ WD ++ V + H + V V + P +K+VSA D I +D
Sbjct: 247 FVSSSSDKSIKVWDTSSRSCVNTFFD-HQDQVWSVKYNPTG-SKIVSAGDDRAIHIYD 302
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 38/166 (22%), Positives = 77/166 (46%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GHS +V I+F + SC D R WD R+ + + +F +F +
Sbjct: 378 EGHSRSVYGIAFQQDGA--LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG 435
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+L + G +Q + WD R +K + + +H V+QV + P + +AS D + +
Sbjct: 436 YHLASGGEDNQCRIWDLRMRKSLYIIP-AHANLVSQVKYEPQEGYFLATASYDMKVNIW- 493
Query: 197 TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW 242
+G D + L++S+ + V + +++ + ++H T+ +W
Sbjct: 494 SGRDFS---LVKSLAGHESKVASLDITADSSC-IATVSHDRTIKLW 535
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 124 (48.7 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 38/141 (26%), Positives = 62/141 (43%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
W++MA +K++ TGQ KGH+ VN I+ V SCSSD +I+ W
Sbjct: 118 WTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLV--SCSSDLSIKLW 175
Query: 110 DTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168
D ++ G + + +F + D++L+A I+ WD V H +
Sbjct: 176 DFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFR-GHND 234
Query: 169 DVTQVHFVPNNQNKVVSASVD 189
V + + N+ SAS+D
Sbjct: 235 WVRMIR-ISNDGTLFASASLD 254
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 130 (50.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 49/227 (21%), Positives = 91/227 (40%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ V FS + SC +D T++ + + ++ + A E+ C +F +
Sbjct: 614 HTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRF 671
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
+ +++ W+ + V +E H E V HF NN N ++ A+ G F
Sbjct: 672 IATCSVDKKVKIWNSVTGELVQSYDE-HSEQVNCCHFT-NNSNHLLLAT--GSSDYFLKL 727
Query: 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
D+N + ++ SV F + +K L + TL +WD K S +
Sbjct: 728 WDLNQKECRNTMFGHTNSVSHCRFSPD-DKLLASCSADGTLKLWDVKSANERKSINVKQF 786
Query: 259 LASDSWTLDDVDYFVDC-HYPGEGENLWVIGGTGAGTVGYFPVNYGG 304
+ + +D++ V C + +G +L V V F ++ GG
Sbjct: 787 FLNSEESQEDMEVMVKCCSWSADGASLVV---AAKNKVLLFNIHTGG 830
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 48/206 (23%), Positives = 89/206 (43%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-------IKRFGLKN--SIQTNFGDDYVFEIVPKNDWSL 52
E+E E Q K Q+ V++ I + +KN + D V+ D
Sbjct: 570 ELETSEVYRQAKLQAKQEVDNGMLYLEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQR 629
Query: 53 MAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR 112
+A + ++++ TG+ E K H V +FS + +CS D ++ W++
Sbjct: 630 IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADD--RFIATCSVDKKVKIWNSV 687
Query: 113 SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ--IQFWDWRNKKQVACLEESHVEDV 170
+ V S S+++ C F ++++LL A S ++ WD N+K+ H V
Sbjct: 688 TGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDL-NQKECRNTMFGHTNSV 746
Query: 171 TQVHFVPNNQNKVVSASVDGLICTFD 196
+ F P+++ + S S DG + +D
Sbjct: 747 SHCRFSPDDK-LLASCSADGTLKLWD 771
>UNIPROTKB|Q6PNB6 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9986 "Oryctolagus cuniculus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:10681
OrthoDB:EOG4XWFXZ EMBL:AY591252 RefSeq:NP_001075639.1
UniGene:Ocu.3141 ProteinModelPortal:Q6PNB6 SMR:Q6PNB6
GeneID:100008941 Uniprot:Q6PNB6
Length = 353
Score = 123 (48.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 43/177 (24%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 152 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 209
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + V E +H D+ V + P+ + S S D +D
Sbjct: 210 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDINSVRYYPSG-DAFASGSDDATCRLYD 267
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 268 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGARVS 319
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 125 (49.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 43/174 (24%), Positives = 75/174 (43%)
Query: 49 DWSLMAVSL----STNVVKLYSPVTGQYSGECK---GHSSTVNQISFSGPSTPHVLHSCS 101
DWS SL + N + L G + + H++ V + +S PS +V SCS
Sbjct: 253 DWSPFEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWS-PSEKNVFSSCS 311
Query: 102 SDGTIRAWDTRSFHEVWSVTAGSQ---EIFCFSFGGSTDYLLAAGCGSQI-QFWDWRNKK 157
DGT R WD R+ + ++T + ++ S+ LLA G + + WD R+ K
Sbjct: 312 CDGTFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLK 371
Query: 158 Q---VACLEES---HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD 205
VA S H + + + PN + + D I +D ++++++
Sbjct: 372 SSSSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEEE 425
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 126 (49.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 41/154 (26%), Positives = 67/154 (43%)
Query: 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100
V + D L+A N+V+L+ TG + +GH +V ++FS P L S
Sbjct: 418 VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFS-PDGKS-LASG 475
Query: 101 SSDGTIRAWD---TRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNK 156
S D +++ WD +RS + G ++ + +F +L++ +QFWD RN
Sbjct: 476 SLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535
Query: 157 KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190
L+ H V V P N + V A+ G
Sbjct: 536 TTHMMLQ-GHKNSVISVALSPKNNSHGVFATGSG 568
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.8e-05
Identities = 45/169 (26%), Positives = 71/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VK++ P G +GH S + +S P P S S
Sbjct: 113 DWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWS-PHIPGCFASASG 171
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ + A EI + + L+ G ++ WD RN +Q
Sbjct: 172 DQTLRIWDVKTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF 231
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 232 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDPLLETV 277
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.8e-05
Identities = 45/169 (26%), Positives = 71/169 (42%)
Query: 49 DWSL-----MAVSLSTN-VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
DWS + VS S + VK++ P G +GH S + +S P P S S
Sbjct: 113 DWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWS-PHIPGCFASASG 171
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVAC 161
D T+R WD ++ + A EI + + L+ G ++ WD RN +Q
Sbjct: 172 DQTLRIWDVKTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVF 231
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV 210
H + +V F P + + + S S D + ++ D LLE+V
Sbjct: 232 ELLGHTYAIRRVKFSPFHASVLASCSYDFTVRFWNFS---KPDPLLETV 277
>MGI|MGI:1926139 [details] [associations]
symbol:Wsb1 "WD repeat and SOCS box-containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:1926139
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ ChiTaRS:WSB1 EMBL:AF033186 IPI:IPI00119829
RefSeq:NP_062627.3 UniGene:Mm.307022 UniGene:Mm.474790
ProteinModelPortal:O54927 SMR:O54927 IntAct:O54927 STRING:O54927
PhosphoSite:O54927 PRIDE:O54927 Ensembl:ENSMUST00000017821
GeneID:78889 KEGG:mmu:78889 InParanoid:O54927 NextBio:349672
Bgee:O54927 CleanEx:MM_WSB1 Genevestigator:O54927
GermOnline:ENSMUSG00000017677 Uniprot:O54927
Length = 421
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 52/221 (23%), Positives = 90/221 (40%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG+ H V ++F+ P +L S S D T+R
Sbjct: 139 DQLLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFA-PDGSLLLVSASRDKTLRV 197
Query: 109 WDTRSFHEVWSVTAGSQE-IFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V Q ++ +F L + G + W+ + LE H
Sbjct: 198 WDLKDDGNMVKVLRAHQNWVYSCAFSPDCSMLCSVGASKAVFLWNMDKYTMIRKLEGHH- 256
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN 227
DV F P+ + +AS D + +D ++ DLL ++ S + F G N
Sbjct: 257 HDVVACDFSPDGA-LLATASYDTRVYVWDP----HNGDLLMEFGHLFPSPTPI-FAGGAN 310
Query: 228 KHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDD 268
W + +S DG +VAS + + + W +D+
Sbjct: 311 DR-W----VRAVSFSH--DGLHVASLADDKMVRF--WRIDE 342
>DICTYBASE|DDB_G0269388 [details] [associations]
symbol:corB "coronin 7" species:44689 "Dictyostelium
discoideum" [GO:0051015 "actin filament binding" evidence=IEA;IDA]
[GO:0031589 "cell-substrate adhesion" evidence=IMP] [GO:0031276
"negative regulation of lateral pseudopodium assembly"
evidence=IMP] [GO:0031252 "cell leading edge" evidence=IDA]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] [GO:0030864 "cortical actin cytoskeleton"
evidence=IDA] [GO:0030835 "negative regulation of actin filament
depolymerization" evidence=IDA] [GO:0009617 "response to bacterium"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IEA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0001891 "phagocytic cup"
evidence=IDA] [GO:0001667 "ameboidal cell migration" evidence=IMP]
[GO:0045335 "phagocytic vesicle" evidence=IBA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269388 GO:GO:0005829 GO:GO:0031252
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0009617 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030866 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006909 GO:GO:0051015 GO:GO:0042995
GO:GO:0001891 GO:GO:0030864 GO:GO:0031589 GO:GO:0001667
GO:GO:0030835 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 OMA:EVEFARC RefSeq:XP_645927.1
ProteinModelPortal:Q55E54 EnsemblProtists:DDB0232260 GeneID:8616868
KEGG:ddi:DDB_G0269388 ProtClustDB:CLSZ2730920 GO:GO:0031276
Uniprot:Q55E54
Length = 962
Score = 110 (43.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 42 FEIVPKNDWSLMAVSLSTNVVKLY-------SPVTGQYSGE--CKGHSSTVNQISFSGPS 92
FE P N+ L+ S + +K++ S T S C GHS +V I+F+ P
Sbjct: 82 FEFNPFNEHQLVTAS-DDSTIKVWNIDEAIRSGATSLSSASIVCSGHSKSVECIAFN-PV 139
Query: 93 TPHVLHSCSSDGTIRAWDTRSFHEV--WSVTAGSQEIFCFSFGGSTDYLLAAG 143
++L SCS+D T++ WD + E W+ GS +++ GS L+A G
Sbjct: 140 ANNILASCSADKTLKIWDLSNGEEKYSWNFEQGSLTSLSWNYDGSL--LVATG 190
Score = 65 (27.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 37/166 (22%), Positives = 67/166 (40%)
Query: 139 LLAAGCGSQIQFWDWRN--KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
L+ +G ++ WD + H + +T V V +K++++S D + FD
Sbjct: 632 LITSGGDMVVKLWDLNEGGAGEKLSFANVHTDMITSVD-VNWTGDKILTSSKDKKMRIFD 690
Query: 197 TGGDINDDDLL-ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFEN 255
N L E+V + G+ GK + G+T + + + D +N+ S
Sbjct: 691 PR--TNKGGLASETVTHSGSKGGKAVWLGQTGNIFSVGFNKSSEREYQLWDSRNLQS--- 745
Query: 256 ARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301
LASD LD + + Y E + + G G ++ F +N
Sbjct: 746 GTPLASDK--LDHLSGVITPFYD-EDSGVIYLAGKGDSSIRMFEIN 788
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 122 (48.0 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 49/179 (27%), Positives = 76/179 (42%)
Query: 73 SGECK-----GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD-TRSFHEVWSVTAGSQ- 125
S ECK GH TV ++++S P + L S S D T W T E +V G +
Sbjct: 49 SWECKCVLSDGHQRTVRKVAWS-PCGKY-LASASFDATTCIWKKTDEDFECLTVLEGHEN 106
Query: 126 EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVPNNQNKV 183
E+ C ++ S L + W+ + + CL SH +DV V + P Q +
Sbjct: 107 EVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPT-QELL 165
Query: 184 VSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW 242
SAS D IC + D D + ++ ++V + F E + C + T+ IW
Sbjct: 166 ASASYDNKICIYKEEDD--DWECRATLEGHESTVWSLTFDPEGRRLASC-SDDRTVKIW 221
>UNIPROTKB|Q8NFH3 [details] [associations]
symbol:NUP43 "Nucleoporin Nup43" species:9606 "Homo
sapiens" [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0007059
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
GO:GO:0015031 GO:GO:0005975 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0051028 GO:GO:0000236
GO:GO:0000777 GO:GO:0031080 eggNOG:NOG270547 KO:K14305
EMBL:AF514997 EMBL:BC065028 EMBL:AK023349 IPI:IPI00742943
RefSeq:NP_942590.1 UniGene:Hs.510375 ProteinModelPortal:Q8NFH3
SMR:Q8NFH3 IntAct:Q8NFH3 STRING:Q8NFH3 PhosphoSite:Q8NFH3
DMDM:27923819 PaxDb:Q8NFH3 PRIDE:Q8NFH3 DNASU:348995
Ensembl:ENST00000340413 Ensembl:ENST00000460354 GeneID:348995
KEGG:hsa:348995 UCSC:uc003qmz.3 CTD:348995 GeneCards:GC06M150087
HGNC:HGNC:21182 HPA:HPA027126 HPA:HPA027291 HPA:HPA028500
MIM:608141 neXtProt:NX_Q8NFH3 PharmGKB:PA134930788
HOGENOM:HOG000007964 HOVERGEN:HBG052696 InParanoid:Q8NFH3
OMA:QWTAAHY PhylomeDB:Q8NFH3 GenomeRNAi:348995 NextBio:99471
ArrayExpress:Q8NFH3 Bgee:Q8NFH3 CleanEx:HS_NUP43
Genevestigator:Q8NFH3 GermOnline:ENSG00000120253 Uniprot:Q8NFH3
Length = 380
Score = 123 (48.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 46/193 (23%), Positives = 85/193 (44%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAGSQEIFCFSFGGS 135
SST++ ++F TP +L + +S G ++ WD R ++ S+T + C +
Sbjct: 172 SSTLHAVTFL--RTPEIL-TVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPN 228
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L ++H ++ +VHF P+N + + S DG +
Sbjct: 229 QQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPEHLFTCSEDGSLWH 288
Query: 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254
+D D+ + L ++ + N H ++ LS KD + S
Sbjct: 289 WDASTDVPEKSSLFHQGGRSSTFLSHSISNQANVHQSVIS--SWLSTDPAKDRIEITSLL 346
Query: 255 NARSLASDSWTLD 267
+RSL+ + TLD
Sbjct: 347 PSRSLSVN--TLD 357
>UNIPROTKB|Q5ZKH3 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OrthoDB:EOG4001J7
GO:GO:0001739 EMBL:AJ720111 IPI:IPI00586997 RefSeq:NP_001026547.1
UniGene:Gga.8810 ProteinModelPortal:Q5ZKH3 SMR:Q5ZKH3 STRING:Q5ZKH3
Ensembl:ENSGALT00000022764 GeneID:426381 KEGG:gga:426381
InParanoid:Q5ZKH3 NextBio:20827995 ArrayExpress:Q5ZKH3
Uniprot:Q5ZKH3
Length = 446
Score = 124 (48.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 167 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 225
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 226 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMINAIKESY 283
>UNIPROTKB|F1P0V7 [details] [associations]
symbol:EED "Polycomb protein EED" species:9031 "Gallus
gallus" [GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0042054 "histone
methyltransferase activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GeneTree:ENSGT00510000047334 OMA:CTTLTHP
GO:GO:0001739 EMBL:AADN02004576 IPI:IPI00593157
Ensembl:ENSGALT00000001824 ArrayExpress:F1P0V7 Uniprot:F1P0V7
Length = 464
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 185 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 243
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 244 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMINAIKESY 301
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 55 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 112
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 113 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 171
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 172 VRMVR--PNQDGTLIAS 186
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/151 (24%), Positives = 60/151 (39%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P N+W + +K++ TG GH V ++ S T + S D
Sbjct: 180 PSNEW--FCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT--YMFSAGDDKQ 235
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165
++ WD + S ++C + + D +L G S + WD R K Q+ L
Sbjct: 236 VKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-- 293
Query: 166 HVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H DV V P + +V++ S D I +D
Sbjct: 294 HDSDVFSVLARPTDP-QVITGSHDSTIKFWD 323
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 44/198 (22%), Positives = 82/198 (41%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GH S + +S+ ++ S DG + WDTR+ V +E+ SF
Sbjct: 214 EGHESAIADVSWH-MKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFN 272
Query: 137 DYLLA-AGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
+++LA A S + +D R + SH +V QV + PN++ + S+ D + +
Sbjct: 273 EWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVW 332
Query: 196 DTG--GDIN-------DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-ETLSIWDWK 245
D G+ +D E + + G K+ F W + + E S+ W+
Sbjct: 333 DLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQ 392
Query: 246 DGQNV-ASFENARSLASD 262
+++ E+A + D
Sbjct: 393 MAESIYRDEEDAEDIKED 410
>UNIPROTKB|E1BQ96 [details] [associations]
symbol:AMBRA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006914
"autophagy" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0021915 "neural tube development"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0008285 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006914
GO:GO:0043065 OMA:YPDPARD GeneTree:ENSGT00390000016223
EMBL:AADN02033491 EMBL:AADN02033492 IPI:IPI00823460
Ensembl:ENSGALT00000013609 Uniprot:E1BQ96
Length = 1301
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D +LMA + + + + TG+ GH T ++F P+ P ++ S DG +R
Sbjct: 64 DRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFH-PTIPGLIASGCLDGEVRI 122
Query: 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE-SHV 167
WD E W T + I +F + LL A ++I FWDW ++ A ++ S +
Sbjct: 123 WDLHGGSESW-FTDSNNAIASLAFHPTAQLLLIA-TANEIHFWDWSRREPFAVVKTASEM 180
Query: 168 EDVTQVHFVP 177
E V V F P
Sbjct: 181 ERVRLVRFDP 190
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH+ V+ + + L S S D TIR WD + + S +GS+ C S+
Sbjct: 254 GHNEAVSSVLWMDADE---LCSASWDHTIRLWDAETGGQK-STLSGSKVFNCISYSPLCR 309
Query: 138 YLLAAGCGSQIQFWDWRNKK-QVACLE-ESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + ++ WD R+K + L SH VT V + P++++++VS S+D ++ +
Sbjct: 310 RLASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSHEHQLVSGSLDNVVKLW 369
Query: 196 DT 197
DT
Sbjct: 370 DT 371
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH ++ + +S + S S D TI+ WD S + S G++ C S+
Sbjct: 255 GHKEAISSVLWSDAEE---ICSASWDHTIKVWDVES-GSLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH ++ + +S + S S D TIR WD S + S G++ C S+
Sbjct: 255 GHKEAISSVLWSDAEE---ICSASWDHTIRVWDVES-GSLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT + + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 53/224 (23%), Positives = 91/224 (40%)
Query: 44 IVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD 103
+ P W +A S S +K++S +T + GH ++Q+ ++ S L S S D
Sbjct: 62 VSPNKRW--IATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSK--YLASASDD 117
Query: 104 GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
TIR WD V + + + F L++ ++ W N + CL
Sbjct: 118 KTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW---NLQDGTCLR 174
Query: 164 --ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVG 221
+H E + V + + +AS DG+ +D L+E INV S +
Sbjct: 175 MLPAHSEPIISVS-ISADGTLCATASYDGMARIWDVLSGQCLKTLVEP-INVPLSNLQ-- 230
Query: 222 FFGETNKHLWCLTHIETLSIWDWKDGQNVASFEN-ARSLASDSW 264
F E K+L + +WD++ + V F++ + S SW
Sbjct: 231 -FTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSMSW 273
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/154 (23%), Positives = 63/154 (40%)
Query: 43 EIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
++ P N W +K++ +G GH +TV ++ S P P+ L SC
Sbjct: 170 DVEPGNQW--FCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVS-PRHPY-LFSCGE 225
Query: 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACL 162
D ++ WD + + ++ + D L+ AG + + WD R ++ V L
Sbjct: 226 DKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVL 285
Query: 163 EESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V + V +VV+ S+D I +D
Sbjct: 286 S-GHKSTVASLA-VQEFDPQVVTGSMDSTIRLWD 317
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 311 PEAVLVG---GHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCW 356
PE +G GH A+V ++ S+ S + ++G ++G +C W
Sbjct: 360 PEGAFMGNFEGHNAIVNTL----SIN-----SDNVM-FSGADNGSMCFW 398
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH+ V ++ F PS L S S D + R WD E+ S+ +F SF G
Sbjct: 299 GHTQRVCRVDFH-PSG-RFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGS 356
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLE---ESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
L +AG S + WD R + + L+ + H++ + + + ++ ++V+SAS DG I
Sbjct: 357 LLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDW-GSDGHRVLSASADGWIKC 415
Query: 195 FD 196
+D
Sbjct: 416 WD 417
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 47/217 (21%), Positives = 94/217 (43%)
Query: 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVL 97
DDYV + +D + + + ++ +Y +G+ K H + V ++ +T +L
Sbjct: 61 DDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNT--LL 118
Query: 98 HSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCG-SQIQFWDWRN 155
+ ++G ++ WD + S I FG + ++LA+G S+++ WD +
Sbjct: 119 ATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNS 178
Query: 156 KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGT 215
+ +A E H + + F P + ++S S D + ++ I + + I V
Sbjct: 179 SRSMAVFE-GHSSVIRGLTFEPTG-SFLLSGSRDKTVQVWN----IKKRSAVRT-IPVFH 231
Query: 216 SVGKVGFF-GETN-KHLWCLTHIETLSIWDWKDGQNV 250
SV +G+ G+ K L+ + WDWK G +
Sbjct: 232 SVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRL 268
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 51/193 (26%), Positives = 82/193 (42%)
Query: 7 ESQSQPKSQSCDNVNSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYS 66
+ +S PKS S ++ + R L +S G Y P N + L++ S + +L+S
Sbjct: 356 DKKSLPKSTSVEDSDGSVRL-LSHS-----GPVYGTTFSPDNKY-LLSCSEDASA-RLWS 407
Query: 67 PVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGS-Q 125
T KGH+ V ++F GP H + S D T + W + + V AG
Sbjct: 408 VDTKTALVAYKGHTGPVWDVAF-GPFG-HYFATASHDQTAQLWSCDHIYPL-RVFAGHLS 464
Query: 126 EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185
++ C +F ++ Y+L + WD V H + VT V P+ + S
Sbjct: 465 DVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFN-GHTQPVTAVAIAPDGHT-MAS 522
Query: 186 ASVDGLICTFDTG 198
A +GLI +D G
Sbjct: 523 ADSEGLIHLWDIG 535
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 43/209 (20%), Positives = 81/209 (38%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ V FS + SC +D T++ + + ++ + A E+ C +F +
Sbjct: 616 HTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKF 673
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
+ +++ W+ + V +E H E V HF NN N ++ A+ G F
Sbjct: 674 IATCSVDKKVKIWNSMTGELVRIYDE-HSEQVNCCHFT-NNSNHLLLAT--GSNDYFLKL 729
Query: 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
D+N ++ ++ SV F + C TL +WD K S +
Sbjct: 730 WDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSAD-GTLKLWDVKSANERKSINVKQF 788
Query: 259 LASDSWTLDDVDYFVDC-HYPGEGENLWV 286
+ +D++ V C + +G + V
Sbjct: 789 FLNSEEPQEDLEVIVKCCSWSADGAKIMV 817
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 33/137 (24%), Positives = 64/137 (46%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+S+M + +K++ TG + KGH+ +V ISF + +L SCS+D TI+ W
Sbjct: 120 FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD--HSGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169
D + F + ++ + + + D++++A I+ W+ + V H E
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREW 236
Query: 170 VTQVHFVPNNQNKVVSA 186
V V PN ++++
Sbjct: 237 VRMVR--PNQDGTLIAS 251
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
++LM + ++++ TG+Y KGH+ +V ++F +L SCS+D +I+ W
Sbjct: 120 FALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK--LLASCSADLSIKLW 177
Query: 110 DTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGCGSQIQFWD 152
D + +E G + +F + DY+L+A I+ W+
Sbjct: 178 DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Score = 83 (34.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 97 LHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK 156
L S S D TIR WD + +++ + +F YL++A I+ WD RNK
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNK 371
Query: 157 KQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189
+ + L +H T + F + V+S SVD
Sbjct: 372 RCMKTLY-AHQHFCTSIDFHKAHPY-VISGSVD 402
Score = 82 (33.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 32/104 (30%), Positives = 46/104 (44%)
Query: 16 SCDNVNSIKRFGLKNS---IQTNFGDDY-VFEI--VPKNDWSLMAVSLSTNVVKLYSPVT 69
SC SIK + + S I+T G D+ V + VP D+ L A T +K++ T
Sbjct: 167 SCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT--IKMWEVAT 224
Query: 70 GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113
G GH V + + + +CS+D TIR W T S
Sbjct: 225 GYCVKTYTGHREWVRMVRVHIEGS--IFATCSNDQTIRVWLTNS 266
>UNIPROTKB|Q3SZ25 [details] [associations]
symbol:EED "Polycomb protein EED" species:9913 "Bos taurus"
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0045120
"pronucleus" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0042054 "histone methyltransferase activity"
evidence=IEA] [GO:0006349 "regulation of gene expression by genetic
imprinting" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001739 "sex chromatin" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0003682
GO:GO:0035098 GO:GO:0042054 GO:GO:0006349 GO:GO:0045120
HOVERGEN:HBG052708 KO:K11462 EMBL:BC103217 IPI:IPI00760407
RefSeq:NP_001035584.1 UniGene:Bt.49104 ProteinModelPortal:Q3SZ25
SMR:Q3SZ25 STRING:Q3SZ25 Ensembl:ENSBTAT00000010324 GeneID:404183
KEGG:bta:404183 CTD:8726 GeneTree:ENSGT00510000047334
HOGENOM:HOG000005759 InParanoid:Q3SZ25 OMA:CTTLTHP
OrthoDB:EOG4001J7 NextBio:20817612 ArrayExpress:Q3SZ25
GO:GO:0001739 Uniprot:Q3SZ25
Length = 441
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 162 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 220
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 221 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY 278
>UNIPROTKB|F1PP86 [details] [associations]
symbol:EED "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045120 "pronucleus" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0042054
"histone methyltransferase activity" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001739 "sex chromatin"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 KO:K11462 CTD:8726 GeneTree:ENSGT00510000047334
OMA:CTTLTHP GO:GO:0001739 EMBL:AAEX03012752 RefSeq:XP_857750.1
ProteinModelPortal:F1PP86 Ensembl:ENSCAFT00000007206 GeneID:476779
KEGG:cfa:476779 Uniprot:F1PP86
Length = 441
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 162 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 220
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 221 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY 278
>UNIPROTKB|O75530 [details] [associations]
symbol:EED "Polycomb protein EED" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001739 "sex chromatin" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA] [GO:0045120 "pronucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=NAS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0045892 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471076
GO:GO:0006351 GO:GO:0003682 GO:GO:0035098 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 HOVERGEN:HBG052708 KO:K11462 CTD:8726
OMA:CTTLTHP OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:AF080227
EMBL:AF070418 EMBL:U90651 EMBL:AF099032 EMBL:AK292120 EMBL:AP003084
EMBL:BC047672 EMBL:BC068995 EMBL:AF078933 IPI:IPI00171248
IPI:IPI00395515 IPI:IPI00432040 RefSeq:NP_003788.2
RefSeq:NP_694536.1 UniGene:Hs.503510 PDB:3IIW PDB:3IIY PDB:3IJ0
PDB:3IJ1 PDB:3IJC PDB:3JPX PDB:3JZG PDB:3JZH PDB:3JZN PDB:3K26
PDB:3K27 PDBsum:3IIW PDBsum:3IIY PDBsum:3IJ0 PDBsum:3IJ1
PDBsum:3IJC PDBsum:3JPX PDBsum:3JZG PDBsum:3JZH PDBsum:3JZN
PDBsum:3K26 PDBsum:3K27 ProteinModelPortal:O75530 SMR:O75530
DIP:DIP-36673N IntAct:O75530 STRING:O75530 PhosphoSite:O75530
PaxDb:O75530 PRIDE:O75530 DNASU:8726 Ensembl:ENST00000263360
Ensembl:ENST00000327320 Ensembl:ENST00000351625 GeneID:8726
KEGG:hsa:8726 UCSC:uc001pbp.3 UCSC:uc001pbr.3 GeneCards:GC11P085955
HGNC:HGNC:3188 MIM:605984 neXtProt:NX_O75530 PharmGKB:PA27624
ChiTaRS:EED EvolutionaryTrace:O75530 GenomeRNAi:8726 NextBio:32733
ArrayExpress:O75530 Bgee:O75530 CleanEx:HS_EED
Genevestigator:O75530 Uniprot:O75530
Length = 441
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 162 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 220
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 221 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY 278
>MGI|MGI:95286 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10090 "Mus
musculus" [GO:0001739 "sex chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006349 "regulation of gene
expression by genetic imprinting" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016571
"histone methylation" evidence=IMP] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042054 "histone methyltransferase activity"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0045120 "pronucleus" evidence=IDA] [GO:0061087 "positive
regulation of histone H3-K27 methylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:95286 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0003682 GO:GO:0035098 GO:GO:0042054 GO:GO:0006349
GO:GO:0045120 GO:GO:0016571 HOVERGEN:HBG052708 KO:K11462 CTD:8726
GeneTree:ENSGT00510000047334 HOGENOM:HOG000005759 OMA:CTTLTHP
OrthoDB:EOG4001J7 GO:GO:0001739 EMBL:U78103 EMBL:U97675
EMBL:AK077664 EMBL:AK131976 EMBL:AK133890 EMBL:BC012966
IPI:IPI00312600 IPI:IPI00900431 IPI:IPI00900437 RefSeq:NP_068676.1
UniGene:Mm.380914 PDB:2QXV PDBsum:2QXV ProteinModelPortal:Q921E6
SMR:Q921E6 DIP:DIP-29523N IntAct:Q921E6 STRING:Q921E6
PhosphoSite:Q921E6 PaxDb:Q921E6 PRIDE:Q921E6
Ensembl:ENSMUST00000107234 GeneID:13626 KEGG:mmu:13626
UCSC:uc009igk.2 InParanoid:Q921E6 EvolutionaryTrace:Q921E6
NextBio:284300 Bgee:Q921E6 Genevestigator:Q921E6 Uniprot:Q921E6
Length = 441
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 162 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 220
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 221 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY 278
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSF--GG 134
+GHS V Q++F+ P + S S D TI+ W+ S +++ A + + C + GG
Sbjct: 354 EGHSHYVMQVTFN-PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGG 412
Query: 135 STDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLI 192
YL+ + WD++ K V LE H +V+ V F P +++ S DG +
Sbjct: 413 DKPYLITGSDDHTAKVWDYQTKSCVQTLE-GHTHNVSAVSFHPELPI-IITGSEDGTV 468
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 194 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 251
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
+ ++ GC + WD R+ + + E +H D+ V + P+ + S S D +D
Sbjct: 252 NTFVSGGCDKKAMVWDMRSGQCIQSFE-THDSDINSVRYYPSG-DAFASGSDDATCRLYD 309
Query: 197 TGGDINDDDLL--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251
D + + ES+I +SV F + + L+ + T+++WD G V+
Sbjct: 310 LRAD-REVAIYSKESIIFGASSVD----FSLSGRLLFAGYNDYTINVWDVLKGSRVS 361
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 124 (48.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/155 (26%), Positives = 65/155 (41%)
Query: 43 EIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS 102
++ P N W A + ++K++ +GQ GH S+V + S P P L S
Sbjct: 191 DVEPGNQW--FASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVS-PRHPF-LFSGGE 246
Query: 103 DGTIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161
D ++ WD +++V G + S S D L+ S + WD R K QV C
Sbjct: 247 DKQVKCWDLE-YNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHC 305
Query: 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V V + +V++AS D + +D
Sbjct: 306 FA-GHTNTVADV-VCQSVDPQVITASHDATVRLWD 338
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 5/10 (50%), Positives = 7/10 (70%)
Query: 238 TLSIWDWKDG 247
+L WDW+ G
Sbjct: 415 SLCFWDWRSG 424
Score = 37 (18.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 5/11 (45%), Positives = 8/11 (72%)
Query: 346 TGGEDGRLCCW 356
+G ++G LC W
Sbjct: 409 SGADNGSLCFW 419
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GHS V ++FS P T L S S D T+R WD + E T + S S
Sbjct: 111 EGHSEAVISVAFS-P-TGKYLASGSGDTTVRFWDLST--ETPHFTCQGHRHWVLSISWSP 166
Query: 137 D-YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK----VVSASVDG 190
D LA+GC QI WD KQV H + +T + + P + N V S+S DG
Sbjct: 167 DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDG 226
Query: 191 LICTFDT 197
+ +DT
Sbjct: 227 SVRVWDT 233
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 64 LYSPVTGQYS-GECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122
L+SP + GH + +NQ+ FS S ++ S S D +I+ WD R+ + S+
Sbjct: 355 LWSPAEDKKPLARMTGHQALINQVLFSPDS--RIIASASFDKSIKLWDGRTGKYLASLRG 412
Query: 123 GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK 182
++ ++ + L++ S ++ WD + +K A L H ++V V + P+ Q +
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLP-GHADEVYAVDWSPDGQ-R 470
Query: 183 VVSASVD 189
V S D
Sbjct: 471 VASGGKD 477
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GHS V ++FS P T L S S D T+R WD + E T + S S
Sbjct: 112 EGHSEAVISVAFS-P-TGKYLASGSGDTTVRFWDLST--ETPHFTCQGHRHWVLSISWSP 167
Query: 137 D-YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK----VVSASVDG 190
D LA+GC QI WD KQV H + +T + + P + N V S+S DG
Sbjct: 168 DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDG 227
Query: 191 LICTFDT 197
+ +DT
Sbjct: 228 SVRVWDT 234
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 402 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 457
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 458 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-- 512
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 513 -NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 564
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH+ ++ + +S + S S D T+R WD S + S G++ C S+
Sbjct: 255 GHTEAISSVLWSDADE---VCSASWDHTVRVWDVES-GGLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P + +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>RGD|1309782 [details] [associations]
symbol:Eed "embryonic ectoderm development" species:10116
"Rattus norvegicus" [GO:0001739 "sex chromatin" evidence=IEA;ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IEA;ISO] [GO:0016571 "histone
methylation" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042054 "histone methyltransferase activity"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0045120 "pronucleus" evidence=IEA;ISO]
[GO:0061087 "positive regulation of histone H3-K27 methylation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1309782 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003682 GO:GO:0042054
GO:GO:0006349 GO:GO:0045120 GeneTree:ENSGT00510000047334
GO:GO:0001739 IPI:IPI00869787 Ensembl:ENSRNOT00000024082
UCSC:RGD:1309782 ArrayExpress:F1LMC5 Uniprot:F1LMC5
Length = 500
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 27/118 (22%), Positives = 61/118 (51%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD- 110
L+AV+ S ++++ +P+T Q GH + +N++ F P P++L S S D +R W+
Sbjct: 221 LLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFH-PRDPNLLLSVSKDHALRLWNI 279
Query: 111 -TRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166
T + ++ G + E+ + + +++ G ++ W +K+ + ++ES+
Sbjct: 280 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY 337
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 42/127 (33%), Positives = 59/127 (46%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GHS V ++FS P T L S S D T+R WD + E T + S S
Sbjct: 62 EGHSEAVISVAFS-P-TGKYLASGSGDTTVRFWDLST--ETPHFTCQGHRHWVLSISWSP 117
Query: 137 D-YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK----VVSASVDG 190
D LA+GC QI WD KQV + H + +T + + P + N + S+S DG
Sbjct: 118 DGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDG 177
Query: 191 LICTFDT 197
+ +DT
Sbjct: 178 SVRVWDT 184
Score = 117 (46.2 bits), Expect = 0.00056, P = 0.00056
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH + +NQ+ FS S ++ S S D +I+ WD R+ + S+ ++ ++ +
Sbjct: 321 GHQALINQVLFSPDS--RIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 138 YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189
L++ S ++ WD + +K A L H ++V V + P+ Q +V S D
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAADLP-GHADEVYAVDWSPDGQ-RVASGGKD 428
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 442 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 497
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 498 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-- 552
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 553 -NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 604
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 444 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 499
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 500 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQF-- 554
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 555 -NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 606
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P W +A + + VKL+ G+ E GH VN + F PS ++L S SS T
Sbjct: 156 PDGKW--LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH-PSIEYLLASGSSSMT 212
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK--QVACLE 163
IR WD FH V + + + C F L G ++ + W ++ V +
Sbjct: 213 IRFWDLEKFHVVSCIEEEATPVRCILFNPD-GCCLYGGFQDSLRVYGWEPERCFDVVVVN 271
Query: 164 ESHVEDVTQVH 174
V D++ H
Sbjct: 272 WGKVADLSVCH 282
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105
P W +A + + VKL+ G+ E GH VN + F PS ++L S SS T
Sbjct: 157 PDGKW--LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFH-PSIEYLLASGSSSMT 213
Query: 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK--QVACLE 163
IR WD FH V + + + C F L G ++ + W ++ V +
Sbjct: 214 IRFWDLEKFHVVSCIEEEATPVRCILFNPD-GCCLYGGFQDSLRVYGWEPERCFDVVVVN 272
Query: 164 ESHVEDVTQVH 174
V D++ H
Sbjct: 273 WGKVADLSVCH 283
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 522 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 577
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 578 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-- 632
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 633 -NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 684
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 527 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 582
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 583 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF-- 637
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 638 -NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 689
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 35/149 (23%), Positives = 62/149 (41%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D L+A L+ +K++ TG H+ V ++F+ P +L S S+D +R
Sbjct: 144 DQLLLATGLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFA-PDGSLMLVSASTDKKLRV 202
Query: 109 WDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV 167
WD + + V G ++ +F + L + G + W+ + LE H
Sbjct: 203 WDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLEGHH- 261
Query: 168 EDVTQVHFVPNNQNKVVSASVDGLICTFD 196
DV F P+ + +AS D + +D
Sbjct: 262 NDVVSCEFSPDGA-LLATASYDTRVIVWD 289
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 33/153 (21%), Positives = 64/153 (41%)
Query: 44 IVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD 103
+ P N W A +K++ +G+ GH STV ++ S P P+ L SC+ D
Sbjct: 209 VEPDNKW--FASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVS-PRHPY-LFSCAED 264
Query: 104 GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163
++ WD + + ++ + + D L+ G + WD R + + L
Sbjct: 265 KMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLS 324
Query: 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196
H V+++ +V++ S+D + +D
Sbjct: 325 -GHTGTVSEL-VCQEADPQVITGSLDSTVRMWD 355
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 47/198 (23%), Positives = 86/198 (43%)
Query: 52 LMAVSLSTNVVKLYSP-VTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110
L+A V+++ P V G+ S + H++TV + F S +L + S D T++ W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGE-STVFRAHTATVRSVHFC--SDGQLLVTASDDKTVKVWS 131
Query: 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV 170
T ++S+T + C F +++A ++ WD +++ V E H V
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGGFV 190
Query: 171 TQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHL 230
T V F P+ + +A +D + +DT L++ +V + F N +L
Sbjct: 191 TYVDFHPSG-TCIAAAGMDNTVKVWDT----RTHRLVQHYQLHSAAVNALSFHPSGN-YL 244
Query: 231 WCLTHIETLSIWDWKDGQ 248
+ TL I D +G+
Sbjct: 245 ITASSDSTLKILDLMEGR 262
>UNIPROTKB|A3KMW1 [details] [associations]
symbol:NUP43 "NUP43 protein" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG270547
KO:K14305 CTD:348995 HOGENOM:HOG000007964 HOVERGEN:HBG052696
OMA:QWTAAHY GeneTree:ENSGT00390000004803 OrthoDB:EOG4TMR2F
EMBL:DAAA02027053 EMBL:BC133315 IPI:IPI00838240
RefSeq:NP_001096566.1 UniGene:Bt.30273 STRING:A3KMW1
Ensembl:ENSBTAT00000045398 GeneID:520174 KEGG:bta:520174
InParanoid:A3KMW1 NextBio:20873042 Uniprot:A3KMW1
Length = 380
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH----EVWSVTAGSQEIFCFSFGGS 135
SST++ ++F TP +L + +S G ++ WD R ++ S+T + C +
Sbjct: 172 SSTLHAVTFL--RTPEIL-TVNSIGQLKIWDFRQQRNEPTQILSLTGDRVPLHCVDRHPN 228
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L ++H ++ +VHF P+N + + + S DG +
Sbjct: 229 QQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWH 288
Query: 195 FDTGGD 200
+D D
Sbjct: 289 WDASTD 294
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 53/177 (29%), Positives = 85/177 (48%)
Query: 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV 120
+VK++ P T +GH++ V + F G HV+ S S D +IR WD + + + ++
Sbjct: 575 MVKVWDPETETCLHTLQGHTNRVYSLQFDGI---HVV-SGSLDTSIRVWDVETGNCIHTL 630
Query: 121 TAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVP 177
T G Q + S D +L +G S ++ WD + + + L+ H VT + F
Sbjct: 631 T-GHQSLT--SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF-- 685
Query: 178 NNQNKVVSASVDGLICTFD--TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232
N+N V+++S DG + +D TG I + LES G S G V +N L C
Sbjct: 686 -NKNFVITSSDDGTVKLWDLRTGEFIRNLVTLES----GGSGGVVWRIRASNTKLVC 737
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 120 (47.3 bits), Expect = 0.00028, P = 0.00028
Identities = 33/139 (23%), Positives = 67/139 (48%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE---VWSVT-AGSQEIFCFSFG 133
GH +V +++S P+ +L SCS+DG+I+ WDTRS + V +V A ++ S+
Sbjct: 273 GHKKSVEDLAWS-PTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWN 331
Query: 134 GSTDYLLAAGCGSQIQFWDWRNKK--QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGL 191
+ +++ G +++ W + + Q L + H +T V + P+ +++ D
Sbjct: 332 RHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQ 391
Query: 192 ICTFDTGGDINDDDLLESV 210
+D + + +E V
Sbjct: 392 TTIWDIATEADGQTNIEGV 410
>DICTYBASE|DDB_G0288453 [details] [associations]
symbol:DDB_G0288453 "E3 ubiquitin-protein ligase
RFWD2" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
dictyBase:DDB_G0288453 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 EMBL:AAFI02000111 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 KO:K10143 RefSeq:XP_636746.1
ProteinModelPortal:Q54IY4 EnsemblProtists:DDB0219336 GeneID:8626624
KEGG:ddi:DDB_G0288453 InParanoid:Q54IY4 OMA:DINVVER Uniprot:Q54IY4
Length = 970
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 43/183 (23%), Positives = 81/183 (44%)
Query: 14 SQSCDNV---NSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG 70
SQ DNV + +K ++ I + Y+ + +D+ ++ L+ TG
Sbjct: 697 SQIRDNVEVHSPVKEMTCRSKISCLSWNTYIKSQIASSDYE--------GIISLWDANTG 748
Query: 71 QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCF 130
Q + H V + FS + P L S S D ++ W T + + ++ + + I C
Sbjct: 749 QNIMTLEEHEKRVWSVDFSR-TDPTQLASGSDDTRVKLWSTTTERAITTIESKAN-ICCV 806
Query: 131 SFGGSTDYLLAAGCGSQ-IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189
F + L+A G I ++D R K + + H + V+ V F+ N+++++SAS D
Sbjct: 807 KFNPCSSNLIAFGSADHHIHYYDLRQYKDPLLIFKGHRKAVSYVKFM--NKDEIISASTD 864
Query: 190 GLI 192
+
Sbjct: 865 STL 867
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109
+SLM + +K++ G + KGH+ +V ISF T +L SCS+D TI+ W
Sbjct: 120 FSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFD--QTGKLLASCSADMTIKLW 177
Query: 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWD 152
D + F + ++ + + + D++++A ++ W+
Sbjct: 178 DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 43/127 (33%), Positives = 58/127 (45%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GHS V ++FS P T L S S D T+R WD + E T + S S
Sbjct: 111 EGHSEAVISVAFS-P-TGKYLASGSGDTTVRFWDLST--ETPHFTCKGHRHWVLSISWSP 166
Query: 137 D-YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK----VVSASVDG 190
D LA+GC QI WD KQV H + +T + + P + N V S+S DG
Sbjct: 167 DGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDG 226
Query: 191 LICTFDT 197
+ +DT
Sbjct: 227 SVRIWDT 233
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 50/213 (23%), Positives = 96/213 (45%)
Query: 41 VFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHS 99
V+ I N + +A KL+S TG+ +GH++ + +SF+ ST ++ +
Sbjct: 137 VYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST--LVAT 194
Query: 100 CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV 159
S D T + WD +S EV+++T S EI SF S + ++ + W+ ++V
Sbjct: 195 GSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKV 254
Query: 160 ACLEESHVEDVTQVHFVPN-NQNKVVSASVDGLICTFDT-GGDI------NDDDLLES-- 209
L H +++ F N + + +++ S+D +D G +DD++L+S
Sbjct: 255 YTLI-GHCAEISSAVF--NWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 210 -----VINVGTSVGKVGFFGETNKHLWCLTHIE 237
+I ++ G F + C+T +E
Sbjct: 312 DYTGKLIATASADGTARIFSAATRE--CVTKLE 342
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD 137
GH ++ + +S + S S D TI WD S + S G++ C S+
Sbjct: 255 GHKEAISSVLWSDAEE---ICSASWDHTIGVWDVES-GSLKSTLTGNKVFNCISYSPLCK 310
Query: 138 YLLAAGCGSQIQFWDWRNK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
L + I+ WD R K V+ SH VT V + P ++ +++S S+D ++ +
Sbjct: 311 RLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Query: 196 DT 197
DT
Sbjct: 371 DT 372
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 120 (47.3 bits), Expect = 0.00032, P = 0.00032
Identities = 61/198 (30%), Positives = 88/198 (44%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
+GH+ V ++FS P T L S S D T+R WD + E TA + S S
Sbjct: 124 EGHTEAVISVAFS-P-TGKYLASGSGDTTVRFWDLST--ETPQFTAKGHRHWVLSIAWSP 179
Query: 137 D-YLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK----VVSASVDG 190
D LA+GC SQI WD Q+ + H + +T + + P + N + SAS DG
Sbjct: 180 DGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDG 239
Query: 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDG--- 247
I +DT D L +V T V K G G L+ + T+ +W +DG
Sbjct: 240 SIRIWDTLMGRCDKILTGHTQSV-TCV-KWGGDGL----LYSSSQDRTIKVWRSQDGILC 293
Query: 248 ---QNVASFENARSLASD 262
Q A + N +L++D
Sbjct: 294 RTLQGHAHWVNTMALSTD 311
>RGD|1596513 [details] [associations]
symbol:Nup43 "nucleoporin 43" species:10116 "Rattus norvegicus"
[GO:0031080 "nuclear pore outer ring" evidence=ISO] [GO:0000776
"kinetochore" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1596513 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 HOVERGEN:HBG052696 EMBL:BC158756
IPI:IPI00764271 UniGene:Rn.216533 ProteinModelPortal:B0BNB5
Genevestigator:B0BNB5 Uniprot:B0BNB5
Length = 378
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 46/213 (21%), Positives = 93/213 (43%)
Query: 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH----EVWSVTAGSQEIFCFSFGGS 135
SST++ ++F TP ++ + +S G ++ WD R ++ S+T + C
Sbjct: 172 SSTLHAVTFL--RTPEIV-TVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPD 228
Query: 136 TDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194
+++A G + WD R L ++H ++ +VHF P+N + + + S DG +
Sbjct: 229 QQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWH 288
Query: 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254
+D + + S+ + G G+ F ++ H+ +S W D E
Sbjct: 289 WDASTNAPEKS---SLFHQG---GRSTFLSHSSNQ--ASVHLSLVSSWLSTDPAK-DRIE 339
Query: 255 NARSLASDSWTLDDVDYFVDCHYPG-EGENLWV 286
L S + +++ +D C G + E+++V
Sbjct: 340 ITSLLPSRTLSVNSLDVLGPCLVCGTDAESIYV 372
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 30/143 (20%), Positives = 61/143 (42%)
Query: 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108
D +L+A + VK++ G H +V + F S H+ + D I+
Sbjct: 597 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKS--HLFFTAGKDNKIKQ 654
Query: 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168
WD F + ++ QE++C + + DY+++A ++ W+ R ++ + EE ++
Sbjct: 655 WDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE-RTREPLILEEEREMQ 713
Query: 169 -DVTQVHFVPNNQNKVVSASVDG 190
+ V + VV+ G
Sbjct: 714 REAEYEESVAKEEQPVVAGETQG 736
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 39/121 (32%), Positives = 53/121 (43%)
Query: 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW--DTRSFHEVWSVTAGSQEIFCFSFGGS 135
GH V + FS PS H+L S S D T+R W + ++ GS CFS G
Sbjct: 58 GHKDAVTCVQFS-PSA-HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ 115
Query: 136 TDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
+ LL A I+ W +K + L E H V F P+ Q +VS S D + +
Sbjct: 116 S--LLTASDDQSIKLWSVHRQKIICTLRE-HNNWVRCARFSPDGQ-LMVSVSDDRTVKLW 171
Query: 196 D 196
D
Sbjct: 172 D 172
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 45/185 (24%), Positives = 85/185 (45%)
Query: 16 SCDNVNSIKRFGLKNSIQTNFGDDYVFEI--VPKNDWSLMAVSLS-TNVVKLYSPVTGQY 72
SC SI+ + L++ T + + + + + SL S S + +L+S Y
Sbjct: 356 SCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWS-FDRTY 414
Query: 73 SGEC-KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFS 131
GH + V+ + F P++ + L + S+D T+R W + + V T + C +
Sbjct: 415 PLRIYAGHLAGVDCVKFH-PNSNY-LATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLA 472
Query: 132 FGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGL 191
F + YL++AG ++ WD + L H +D+T V F ++ + + SAS+D
Sbjct: 473 FSPNGQYLVSAGEDQLLKLWDLASGTLYKDLH-GHTDDITSVTFSLDS-SVIASASMDNS 530
Query: 192 ICTFD 196
+ +D
Sbjct: 531 VRIWD 535
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST 136
K H+ V Q ++ P V S S D T+R WD R + A EI +
Sbjct: 146 KEHAYCVYQAVWN-PKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYD 204
Query: 137 DYLLA-AGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTF 195
D +LA + ++ WD R+ + + H V +V F P+ ++ + S S D +C +
Sbjct: 205 DCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLW 264
Query: 196 D 196
D
Sbjct: 265 D 265
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 119 (46.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 36/130 (27%), Positives = 53/130 (40%)
Query: 36 FGDD--YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPST 93
FG D V+ + D + + V +Y T Q + H VN + F S+
Sbjct: 331 FGRDGFAVWSVRFSGDGREIVAGTGDHSVIVYDLETRQSVLRIRNHEDDVNAVCFGDKSS 390
Query: 94 PHVLHSCSSDGTIRAWDTRSFHE--VWSVTAGSQEIFCF-SFGGSTDYLLAAGCGSQIQF 150
PH+L+S S D T+R WD RS + V G E + G Y+L+ ++
Sbjct: 391 PHILYSGSDDSTVRVWDRRSMADGREAGVFVGHTEGLTYVDSKGDGRYVLSNSKDQTMKL 450
Query: 151 WDWRNKKQVA 160
WD R A
Sbjct: 451 WDLRKMMSTA 460
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 336 PAQSHGIFGWTGGEDGRLCCWLSD 359
P S + ++G EDG++ W D
Sbjct: 515 PGSSDSRYVYSGSEDGKVYVWNLD 538
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 118 (46.6 bits), Expect = 0.00046, P = 0.00046
Identities = 34/123 (27%), Positives = 62/123 (50%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF-HEVWSVT-AGSQEIFCFSFGGST 136
HS +V + +S P+ V SCS D +IR WD R+ + + S A S ++ S+ +
Sbjct: 271 HSKSVEDLQWS-PTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDVNVISWNRTE 329
Query: 137 DYLLAAGCGSQIQFWDWR---NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLIC 193
++L+ G ++ WD R + + VA ++ H VT V + P + + ++ D +I
Sbjct: 330 PFILSGGDDGLLKVWDLRQFQSGRPVASFKQ-HSAPVTSVQWSPVDSSVFAASGADDVIS 388
Query: 194 TFD 196
+D
Sbjct: 389 QWD 391
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111
L+ +K++S + +GH+++V ++ F P +L SC +DG I+ WD
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLL-SCGADGLIKLWDY 592
Query: 112 RSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVT 171
+ + S+ Q I+ +Y A ++ FW +++V E E +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 172 QVHFVPNN-QNK 182
Q + N +NK
Sbjct: 653 QEQSLSNYIKNK 664
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 30/132 (22%), Positives = 57/132 (43%)
Query: 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111
L+ +K++S + +GH+++V ++ F P +L SC +DG I+ WD
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLL-SCGADGLIKLWDY 592
Query: 112 RSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVT 171
+ + S+ Q I+ +Y A ++ FW +++V E E +
Sbjct: 593 KQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFWTDNTEEEVKFKELQAKEKIE 652
Query: 172 QVHFVPNN-QNK 182
Q + N +NK
Sbjct: 653 QEQSLSNYIKNK 664
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 130 (50.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 49/227 (21%), Positives = 91/227 (40%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138
H+ V FS + SC +D T++ + + ++ + A E+ C +F +
Sbjct: 350 HTDAVYHACFSEDGQR--IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRF 407
Query: 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198
+ +++ W+ + V +E H E V HF NN N ++ A+ G F
Sbjct: 408 IATCSVDKKVKIWNSVTGELVQSYDE-HSEQVNCCHFT-NNSNHLLLAT--GSSDYFLKL 463
Query: 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258
D+N + ++ SV F + +K L + TL +WD K S +
Sbjct: 464 WDLNQKECRNTMFGHTNSVSHCRFSPD-DKLLASCSADGTLKLWDVKSANERKSINVKQF 522
Query: 259 LASDSWTLDDVDYFVDC-HYPGEGENLWVIGGTGAGTVGYFPVNYGG 304
+ + +D++ V C + +G +L V V F ++ GG
Sbjct: 523 FLNSEESQEDMEVMVKCCSWSADGASLVV---AAKNKVLLFNIHTGG 566
Score = 128 (50.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 48/206 (23%), Positives = 89/206 (43%)
Query: 2 EMEAEESQSQPKSQSCDNVNS-------IKRFGLKN--SIQTNFGDDYVFEIVPKNDWSL 52
E+E E Q K Q+ V++ I + +KN + D V+ D
Sbjct: 306 ELETSEVYRQAKLQAKQEVDNGMLYLEWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQR 365
Query: 53 MAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR 112
+A + ++++ TG+ E K H V +FS + +CS D ++ W++
Sbjct: 366 IASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADD--RFIATCSVDKKVKIWNSV 423
Query: 113 SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ--IQFWDWRNKKQVACLEESHVEDV 170
+ V S S+++ C F ++++LL A S ++ WD N+K+ H V
Sbjct: 424 TGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDL-NQKECRNTMFGHTNSV 482
Query: 171 TQVHFVPNNQNKVVSASVDGLICTFD 196
+ F P+++ + S S DG + +D
Sbjct: 483 SHCRFSPDDK-LLASCSADGTLKLWD 507
Score = 37 (18.1 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 309 GPPEAVLVG---GHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSEIN 365
G E ++G GH+ V +L Q R + + DG+ SDDS+
Sbjct: 715 GTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQV 774
Query: 366 RSWISNAMVMRSPKTHKK 383
+W S V S + H++
Sbjct: 775 WNWQSEETV--SLQAHQE 790
>UNIPROTKB|H0YLU1 [details] [associations]
symbol:GNB5 "Guanine nucleotide-binding protein subunit
beta-5" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007186
EMBL:AC023906 HGNC:HGNC:4401 ChiTaRS:GNB5 EMBL:AC010674
Ensembl:ENST00000558519 Bgee:H0YLU1 Uniprot:H0YLU1
Length = 103
Score = 95 (38.5 bits), Expect = 0.00049, P = 0.00049
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-- 136
H++ ++ SF+ S +L + S DGT WD S + S ++ C S
Sbjct: 9 HTNYLSACSFTN-SDMQIL-TASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 66
Query: 137 DYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQV 173
+ ++ GC + WD R+ + V E +H D+ V
Sbjct: 67 NTFVSGGCDKKAMVWDMRSGQCVQAFE-THESDINSV 102
WARNING: HSPs involving 25 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 389 389 0.00093 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 275
No. of states in DFA: 622 (66 KB)
Total size of DFA: 307 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.91u 0.18s 34.09t Elapsed: 00:00:01
Total cpu time: 33.95u 0.18s 34.13t Elapsed: 00:00:01
Start: Sat May 11 08:05:55 2013 End: Sat May 11 08:05:56 2013
WARNINGS ISSUED: 2