Query 016457
Match_columns 389
No_of_seqs 674 out of 1882
Neff 11.6
Searched_HMMs 29240
Date Mon Mar 25 13:54:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016457.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016457hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.1E-51 3.7E-56 367.7 38.0 289 32-358 101-409 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 6.3E-50 2.1E-54 347.7 41.9 289 31-357 47-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 4.5E-50 1.5E-54 345.3 38.2 288 33-359 26-320 (321)
4 2ynn_A Coatomer subunit beta'; 100.0 5E-49 1.7E-53 336.6 41.0 293 31-360 5-302 (304)
5 4gqb_B Methylosome protein 50; 100.0 3.2E-50 1.1E-54 348.6 33.2 298 23-361 16-332 (344)
6 4g56_B MGC81050 protein; prote 100.0 2.4E-50 8.1E-55 352.2 31.9 306 18-361 23-344 (357)
7 2pbi_B Guanine nucleotide-bind 100.0 9.2E-49 3.1E-53 341.9 39.9 291 30-357 55-354 (354)
8 1nr0_A Actin interacting prote 100.0 2.4E-48 8.1E-53 363.4 37.9 313 13-359 162-610 (611)
9 3iz6_a 40S ribosomal protein R 100.0 6E-49 2E-53 346.7 31.8 312 22-361 47-376 (380)
10 4ery_A WD repeat-containing pr 100.0 3.4E-47 1.2E-51 326.9 40.9 291 32-359 16-311 (312)
11 1nr0_A Actin interacting prote 100.0 7.8E-48 2.7E-52 360.0 38.0 307 21-361 129-568 (611)
12 3frx_A Guanine nucleotide-bind 100.0 5.4E-47 1.8E-51 326.2 40.1 289 32-360 10-317 (319)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-47 5.6E-52 333.1 37.0 302 31-361 7-336 (345)
14 2ymu_A WD-40 repeat protein; u 100.0 2.4E-46 8.3E-51 348.6 42.2 301 12-357 275-577 (577)
15 1erj_A Transcriptional repress 100.0 2.1E-46 7.1E-51 332.0 39.5 291 35-360 61-389 (393)
16 2hes_X YDR267CP; beta-propelle 100.0 2.4E-46 8.3E-51 323.6 36.5 295 31-360 6-328 (330)
17 2xzm_R RACK1; ribosome, transl 100.0 1.7E-45 5.8E-50 320.3 39.2 294 31-361 13-341 (343)
18 3ow8_A WD repeat-containing pr 100.0 1.1E-45 3.7E-50 318.0 36.5 267 12-301 49-320 (321)
19 1vyh_C Platelet-activating fac 100.0 6.3E-46 2.2E-50 330.5 35.5 267 12-301 121-410 (410)
20 2pm9_A Protein WEB1, protein t 100.0 5.4E-47 1.9E-51 338.8 27.5 323 18-360 42-414 (416)
21 2ymu_A WD-40 repeat protein; u 100.0 3.2E-44 1.1E-48 334.3 43.5 304 12-360 234-539 (577)
22 1r5m_A SIR4-interacting protei 100.0 1.5E-44 5.2E-49 323.6 37.8 311 13-359 60-424 (425)
23 4aow_A Guanine nucleotide-bind 100.0 5.7E-44 2E-48 310.5 39.1 299 31-361 30-338 (340)
24 1got_B GT-beta; complex (GTP-b 100.0 5.6E-44 1.9E-48 310.2 38.3 265 11-299 67-340 (340)
25 3zwl_B Eukaryotic translation 100.0 1.1E-43 3.7E-48 312.1 40.6 289 33-361 26-347 (369)
26 2ynn_A Coatomer subunit beta'; 100.0 6.9E-44 2.3E-48 304.8 36.9 272 10-302 24-302 (304)
27 1gxr_A ESG1, transducin-like e 100.0 1.1E-43 3.8E-48 308.1 37.8 279 37-358 50-335 (337)
28 4gqb_B Methylosome protein 50; 100.0 2.6E-44 8.9E-49 311.6 33.5 247 38-305 82-334 (344)
29 3ei3_B DNA damage-binding prot 100.0 1.5E-43 5E-48 313.1 36.9 300 32-360 66-382 (383)
30 4gga_A P55CDC, cell division c 100.0 4.1E-43 1.4E-47 313.8 40.2 285 40-361 107-396 (420)
31 3vl1_A 26S proteasome regulato 100.0 9.7E-44 3.3E-48 318.2 33.8 316 13-360 70-419 (420)
32 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-43 7.6E-48 310.6 35.1 295 38-360 8-361 (372)
33 3frx_A Guanine nucleotide-bind 100.0 8.2E-43 2.8E-47 300.1 37.4 273 13-303 32-318 (319)
34 4e54_B DNA damage-binding prot 100.0 8E-44 2.7E-48 319.8 32.3 296 38-361 119-431 (435)
35 3k26_A Polycomb protein EED; W 100.0 2.6E-43 8.8E-48 309.4 33.8 291 38-359 18-365 (366)
36 4ggc_A P55CDC, cell division c 100.0 2.6E-42 8.8E-47 297.2 39.3 285 40-361 27-316 (318)
37 1r5m_A SIR4-interacting protei 100.0 3.8E-43 1.3E-47 314.5 35.0 301 19-361 23-362 (425)
38 3dm0_A Maltose-binding peripla 100.0 1E-42 3.4E-47 330.6 39.8 287 34-359 377-692 (694)
39 2pbi_B Guanine nucleotide-bind 100.0 1.4E-42 4.8E-47 302.8 37.4 266 11-299 76-354 (354)
40 4g56_B MGC81050 protein; prote 100.0 7.5E-43 2.6E-47 304.8 33.5 269 13-303 56-344 (357)
41 1sq9_A Antiviral protein SKI8; 100.0 8.9E-43 3.1E-47 309.5 33.0 302 32-361 9-396 (397)
42 3odt_A Protein DOA1; ubiquitin 100.0 6.9E-42 2.3E-46 293.8 37.4 284 30-362 9-298 (313)
43 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.1E-42 1.7E-46 298.4 36.4 282 11-305 28-338 (345)
44 4ery_A WD repeat-containing pr 100.0 1.3E-41 4.4E-46 292.1 37.3 269 12-301 36-311 (312)
45 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-41 1.5E-45 303.1 42.6 302 13-361 131-443 (445)
46 2xzm_R RACK1; ribosome, transl 100.0 7.9E-42 2.7E-46 297.1 36.2 279 10-303 38-341 (343)
47 2j04_B YDR362CP, TAU91; beta p 100.0 2.7E-43 9.3E-48 319.9 27.4 311 13-361 175-518 (524)
48 3i2n_A WD repeat-containing pr 100.0 9.4E-43 3.2E-47 304.8 29.6 297 38-361 18-354 (357)
49 3dwl_C Actin-related protein 2 100.0 3.9E-44 1.3E-48 316.1 20.6 244 38-301 11-280 (377)
50 4aez_A CDC20, WD repeat-contai 100.0 1.3E-41 4.4E-46 302.3 36.8 282 40-362 95-382 (401)
51 3iz6_a 40S ribosomal protein R 100.0 1.4E-42 4.9E-47 306.0 30.0 276 11-304 78-377 (380)
52 2pm9_A Protein WEB1, protein t 100.0 4.8E-43 1.6E-47 313.2 27.1 287 38-362 12-339 (416)
53 2hes_X YDR267CP; beta-propelle 100.0 1.1E-41 3.8E-46 294.4 33.9 270 13-302 26-328 (330)
54 3vl1_A 26S proteasome regulato 100.0 2.2E-42 7.4E-47 309.4 30.1 286 39-361 57-366 (420)
55 1erj_A Transcriptional repress 100.0 5.4E-41 1.9E-45 297.2 38.6 271 13-303 78-390 (393)
56 3gre_A Serine/threonine-protei 100.0 8.2E-42 2.8E-46 307.3 32.8 306 25-357 47-437 (437)
57 4a11_B DNA excision repair pro 100.0 5.9E-41 2E-45 298.7 37.6 314 19-361 21-366 (408)
58 3v7d_B Cell division control p 100.0 5.5E-41 1.9E-45 304.2 37.9 303 13-359 134-462 (464)
59 3sfz_A APAF-1, apoptotic pepti 100.0 2.6E-41 9E-46 340.8 39.5 326 12-361 628-1035(1249)
60 2oaj_A Protein SNI1; WD40 repe 100.0 8E-42 2.7E-46 330.5 32.7 328 13-361 71-606 (902)
61 4h5i_A Guanine nucleotide-exch 100.0 5.2E-42 1.8E-46 300.3 27.4 285 38-362 14-345 (365)
62 1pgu_A Actin interacting prote 100.0 1.1E-40 3.7E-45 312.7 36.8 310 13-360 175-614 (615)
63 1gxr_A ESG1, transducin-like e 100.0 4.7E-41 1.6E-45 291.6 31.6 282 38-361 9-297 (337)
64 2pm7_B Protein transport prote 100.0 1.2E-40 4E-45 283.8 33.2 254 34-302 4-285 (297)
65 2pm7_B Protein transport prote 100.0 1.5E-40 5E-45 283.2 33.4 256 74-360 3-285 (297)
66 3dw8_B Serine/threonine-protei 100.0 4E-41 1.4E-45 303.6 31.5 307 37-358 27-444 (447)
67 2oaj_A Protein SNI1; WD40 repe 100.0 2.3E-41 7.8E-46 327.3 30.7 330 12-361 30-520 (902)
68 3mkq_A Coatomer beta'-subunit; 100.0 5.1E-40 1.7E-44 318.0 38.9 291 32-361 6-303 (814)
69 3v7d_B Cell division control p 100.0 1.2E-39 4.1E-44 295.4 38.1 284 31-362 113-423 (464)
70 1p22_A F-BOX/WD-repeat protein 100.0 8.5E-40 2.9E-44 293.7 36.7 277 38-361 133-415 (435)
71 3mkq_A Coatomer beta'-subunit; 100.0 2E-39 6.9E-44 313.9 39.9 273 10-303 24-303 (814)
72 4aez_A CDC20, WD repeat-contai 100.0 3.7E-39 1.3E-43 286.5 37.6 269 14-305 106-383 (401)
73 1yfq_A Cell cycle arrest prote 100.0 5.1E-40 1.8E-44 285.8 31.3 286 38-358 11-322 (342)
74 3bg1_A Protein SEC13 homolog; 100.0 1.7E-40 5.7E-45 285.3 26.2 255 75-360 8-293 (316)
75 3mmy_A MRNA export factor; mRN 100.0 6.2E-40 2.1E-44 288.0 29.9 303 30-361 30-347 (368)
76 3sfz_A APAF-1, apoptotic pepti 100.0 3E-39 1E-43 325.9 38.3 288 34-360 610-913 (1249)
77 1pgu_A Actin interacting prote 100.0 2.5E-39 8.5E-44 303.5 34.7 277 20-326 38-345 (615)
78 1sq9_A Antiviral protein SKI8; 100.0 1.5E-39 5.3E-44 288.7 30.5 280 12-303 27-396 (397)
79 3dm0_A Maltose-binding peripla 100.0 6.3E-39 2.1E-43 304.5 36.7 276 13-301 397-692 (694)
80 3k26_A Polycomb protein EED; W 100.0 1.2E-39 4.2E-44 285.9 29.3 270 14-301 37-365 (366)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.6E-38 1.2E-42 284.1 38.2 278 32-361 111-392 (445)
82 3f3f_A Nucleoporin SEH1; struc 100.0 3.7E-39 1.3E-43 280.8 30.7 293 35-363 7-340 (351)
83 3bg1_A Protein SEC13 homolog; 100.0 1.2E-39 4E-44 280.0 26.2 247 38-302 13-293 (316)
84 3jrp_A Fusion protein of prote 100.0 1.3E-38 4.3E-43 280.8 32.5 256 31-303 3-288 (379)
85 4aow_A Guanine nucleotide-bind 100.0 5.7E-38 2E-42 272.6 35.8 276 13-304 53-339 (340)
86 4gga_A P55CDC, cell division c 100.0 1.5E-37 5.2E-42 277.7 39.4 262 19-305 123-398 (420)
87 3jrp_A Fusion protein of prote 100.0 3.8E-38 1.3E-42 277.8 32.1 258 70-360 1-287 (379)
88 3zwl_B Eukaryotic translation 100.0 2.8E-37 9.5E-42 271.2 37.4 269 12-305 45-349 (369)
89 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-38 4E-43 283.5 28.3 282 41-361 37-343 (402)
90 3i2n_A WD repeat-containing pr 100.0 6.4E-38 2.2E-42 274.1 31.3 270 15-304 35-355 (357)
91 4a11_B DNA excision repair pro 100.0 1.4E-37 4.9E-42 276.8 34.1 314 11-359 56-404 (408)
92 3ei3_B DNA damage-binding prot 100.0 2E-37 6.7E-42 273.8 33.7 264 12-302 87-382 (383)
93 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-37 5.7E-42 276.0 31.7 273 14-305 50-345 (402)
94 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-37 5.5E-42 273.2 31.4 281 12-304 21-363 (372)
95 2j04_B YDR362CP, TAU91; beta p 100.0 3.5E-38 1.2E-42 286.4 27.4 271 37-344 132-458 (524)
96 3jro_A Fusion protein of prote 100.0 1.8E-37 6.2E-42 296.1 31.7 259 34-303 4-286 (753)
97 2xyi_A Probable histone-bindin 100.0 4.6E-37 1.6E-41 275.3 31.9 298 38-361 45-411 (430)
98 3dwl_C Actin-related protein 2 100.0 3.8E-38 1.3E-42 277.8 23.3 282 12-300 24-377 (377)
99 3odt_A Protein DOA1; ubiquitin 100.0 4.7E-36 1.6E-40 257.4 35.8 263 12-305 30-299 (313)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-36 8.5E-41 272.3 35.4 296 39-361 5-392 (450)
101 4ggc_A P55CDC, cell division c 100.0 1.9E-35 6.6E-40 254.2 38.8 261 18-303 42-316 (318)
102 4e54_B DNA damage-binding prot 100.0 2E-37 7E-42 278.1 26.2 271 12-305 133-433 (435)
103 3gre_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 276.8 28.0 280 45-361 34-360 (437)
104 3bws_A Protein LP49; two-domai 100.0 4.3E-36 1.5E-40 269.7 34.7 296 22-360 102-432 (433)
105 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-36 2.9E-40 260.1 34.3 306 29-363 9-339 (355)
106 2j04_A TAU60, YPL007P, hypothe 100.0 2.2E-37 7.6E-42 274.7 23.6 265 38-359 15-296 (588)
107 1p22_A F-BOX/WD-repeat protein 100.0 4.1E-36 1.4E-40 269.8 31.8 258 13-305 145-417 (435)
108 1l0q_A Surface layer protein; 100.0 3.3E-34 1.1E-38 253.9 42.6 315 15-362 6-344 (391)
109 3lrv_A PRE-mRNA-splicing facto 100.0 3.1E-36 1.1E-40 262.0 28.4 272 43-359 41-332 (343)
110 4h5i_A Guanine nucleotide-exch 100.0 1.8E-36 6.1E-41 265.1 26.2 263 20-303 42-344 (365)
111 2xyi_A Probable histone-bindin 100.0 1.3E-35 4.5E-40 265.9 31.3 249 38-304 128-412 (430)
112 3jro_A Fusion protein of prote 100.0 3E-36 1E-40 287.8 27.1 256 74-360 3-285 (753)
113 4gq1_A NUP37; propeller, trans 100.0 5.1E-36 1.8E-40 265.1 25.8 301 38-359 15-388 (393)
114 3dw8_B Serine/threonine-protei 100.0 1.9E-35 6.3E-40 266.6 28.2 265 79-361 27-374 (447)
115 1yfq_A Cell cycle arrest prote 100.0 7.9E-35 2.7E-39 253.1 29.0 255 75-361 6-283 (342)
116 2j04_A TAU60, YPL007P, hypothe 100.0 9.7E-35 3.3E-39 257.9 28.4 288 10-348 26-349 (588)
117 1l0q_A Surface layer protein; 100.0 2.6E-33 9E-38 248.1 36.9 267 51-361 3-276 (391)
118 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-34 4.9E-39 251.7 26.6 273 11-305 23-340 (351)
119 3mmy_A MRNA export factor; mRN 100.0 6.1E-33 2.1E-37 243.4 32.8 262 64-361 23-305 (368)
120 2w18_A PALB2, fancn, partner a 100.0 2.6E-32 8.9E-37 227.9 33.6 278 41-358 42-355 (356)
121 3vu4_A KMHSV2; beta-propeller 100.0 5.5E-33 1.9E-37 242.3 29.8 249 64-361 3-272 (355)
122 3lrv_A PRE-mRNA-splicing facto 100.0 4.3E-33 1.5E-37 242.1 28.4 261 13-302 50-333 (343)
123 4gq1_A NUP37; propeller, trans 100.0 3.8E-33 1.3E-37 246.8 26.4 237 47-301 98-388 (393)
124 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-32 9.5E-37 245.9 32.5 240 40-303 104-392 (450)
125 3bws_A Protein LP49; two-domai 100.0 5.5E-31 1.9E-35 236.4 34.6 263 14-302 137-432 (433)
126 1nir_A Nitrite reductase; hemo 100.0 1.3E-30 4.6E-35 238.5 37.7 308 15-362 153-516 (543)
127 2w18_A PALB2, fancn, partner a 100.0 3.8E-30 1.3E-34 214.9 26.5 253 19-300 61-355 (356)
128 1nir_A Nitrite reductase; hemo 100.0 6.8E-29 2.3E-33 227.3 35.6 290 45-362 144-460 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.7E-29 2.3E-33 220.8 31.1 275 22-342 94-410 (415)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 9.3E-30 3.2E-34 226.3 24.5 278 39-361 63-388 (415)
131 3u4y_A Uncharacterized protein 100.0 3.5E-27 1.2E-31 203.9 31.6 290 45-361 4-305 (331)
132 3vgz_A Uncharacterized protein 100.0 4.7E-26 1.6E-30 198.5 32.6 272 38-350 40-334 (353)
133 2ecf_A Dipeptidyl peptidase IV 100.0 9E-27 3.1E-31 223.0 27.4 285 38-360 36-413 (741)
134 1xfd_A DIP, dipeptidyl aminope 100.0 6.9E-27 2.4E-31 223.2 24.1 287 39-361 17-394 (723)
135 1ri6_A Putative isomerase YBHE 100.0 1.6E-25 5.5E-30 194.3 30.2 278 52-360 7-308 (343)
136 1ri6_A Putative isomerase YBHE 100.0 2.3E-25 7.8E-30 193.3 31.0 265 16-301 10-307 (343)
137 2z3z_A Dipeptidyl aminopeptida 100.0 3.2E-26 1.1E-30 218.0 27.4 280 39-361 82-436 (706)
138 2ojh_A Uncharacterized protein 100.0 2.6E-26 8.9E-31 194.8 23.6 256 56-351 18-293 (297)
139 2ecf_A Dipeptidyl peptidase IV 100.0 1E-25 3.5E-30 215.8 30.4 306 14-361 51-460 (741)
140 1pby_B Quinohemoprotein amine 100.0 9.2E-26 3.1E-30 195.3 26.5 268 51-362 2-312 (337)
141 3u4y_A Uncharacterized protein 99.9 1.7E-24 5.8E-29 187.0 33.5 277 14-304 13-306 (331)
142 2ojh_A Uncharacterized protein 99.9 2.7E-25 9.3E-30 188.5 27.3 254 16-292 17-292 (297)
143 1k32_A Tricorn protease; prote 99.9 8.9E-25 3E-29 216.2 32.5 297 20-361 32-462 (1045)
144 1pby_B Quinohemoprotein amine 99.9 4.4E-24 1.5E-28 184.7 28.5 263 15-305 5-313 (337)
145 1xfd_A DIP, dipeptidyl aminope 99.9 2.8E-24 9.6E-29 205.2 28.2 293 18-347 34-427 (723)
146 3o4h_A Acylamino-acid-releasin 99.9 1.6E-24 5.4E-29 201.6 24.9 269 38-359 21-314 (582)
147 1k32_A Tricorn protease; prote 99.9 2.1E-24 7.1E-29 213.6 26.8 290 22-359 184-501 (1045)
148 3hfq_A Uncharacterized protein 99.9 5.9E-23 2E-27 178.6 31.5 268 19-305 14-322 (347)
149 3vgz_A Uncharacterized protein 99.9 2.2E-22 7.4E-27 175.3 34.9 244 20-286 68-330 (353)
150 3hfq_A Uncharacterized protein 99.9 5.3E-23 1.8E-27 178.9 30.8 282 52-360 4-317 (347)
151 1jmx_B Amine dehydrogenase; ox 99.9 4.5E-23 1.5E-27 179.3 28.9 274 43-361 4-326 (349)
152 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-22 4.5E-27 193.1 30.7 263 18-304 98-437 (706)
153 1z68_A Fibroblast activation p 99.9 5.8E-24 2E-28 202.9 18.9 283 42-360 19-391 (719)
154 3scy_A Hypothetical bacterial 99.9 1.6E-21 5.5E-26 170.4 32.1 282 47-360 10-337 (361)
155 3pe7_A Oligogalacturonate lyas 99.9 3.4E-22 1.2E-26 176.5 27.8 292 31-360 22-382 (388)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-22 4.1E-27 181.1 23.1 199 38-247 36-279 (434)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-21 5.1E-26 174.1 29.4 160 38-200 92-279 (434)
158 1z68_A Fibroblast activation p 99.9 5.2E-22 1.8E-26 189.4 25.6 307 18-361 33-444 (719)
159 1jmx_B Amine dehydrogenase; ox 99.9 2.1E-21 7.3E-26 168.7 27.2 266 13-305 13-328 (349)
160 3o4h_A Acylamino-acid-releasin 99.9 5.5E-22 1.9E-26 184.5 22.3 233 80-358 21-274 (582)
161 3scy_A Hypothetical bacterial 99.9 2.3E-20 7.7E-25 163.1 29.4 264 18-305 24-342 (361)
162 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.5E-20 8.6E-25 163.0 28.4 280 52-361 4-342 (365)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.6E-20 2.3E-24 160.3 26.4 264 21-303 14-342 (365)
164 3c5m_A Oligogalacturonate lyas 99.9 1.5E-20 5.1E-25 166.3 22.2 274 41-359 38-381 (396)
165 4a5s_A Dipeptidyl peptidase 4 99.9 3.5E-20 1.2E-24 176.9 25.0 247 39-305 17-356 (740)
166 2oiz_A Aromatic amine dehydrog 99.9 4.9E-19 1.7E-23 154.1 28.3 281 18-342 28-360 (361)
167 2oiz_A Aromatic amine dehydrog 99.9 6.7E-19 2.3E-23 153.3 27.3 282 49-361 14-335 (361)
168 3fvz_A Peptidyl-glycine alpha- 99.8 3.1E-18 1.1E-22 147.4 27.9 246 38-303 23-323 (329)
169 1q7f_A NHL, brain tumor CG1071 99.8 1.8E-17 6.3E-22 139.7 31.3 242 78-361 27-281 (286)
170 1qks_A Cytochrome CD1 nitrite 99.8 1.9E-16 6.5E-21 144.7 40.0 317 17-361 173-539 (567)
171 3fvz_A Peptidyl-glycine alpha- 99.8 5.9E-18 2E-22 145.7 28.3 247 80-361 23-323 (329)
172 1q7f_A NHL, brain tumor CG1071 99.8 3.9E-17 1.3E-21 137.7 31.3 240 38-303 29-281 (286)
173 3pe7_A Oligogalacturonate lyas 99.8 3.2E-18 1.1E-22 150.9 25.1 267 63-361 13-330 (388)
174 3azo_A Aminopeptidase; POP fam 99.8 8.2E-18 2.8E-22 158.9 29.3 299 18-358 44-409 (662)
175 4a5s_A Dipeptidyl peptidase 4 99.8 7.6E-18 2.6E-22 160.9 28.1 306 20-361 35-450 (740)
176 2dg1_A DRP35, lactonase; beta 99.8 1.9E-17 6.4E-22 142.9 27.9 285 39-359 6-313 (333)
177 3azo_A Aminopeptidase; POP fam 99.8 1.1E-18 3.9E-23 164.8 21.7 291 38-359 23-366 (662)
178 2gop_A Trilobed protease; beta 99.8 3.1E-17 1.1E-21 142.4 29.1 258 39-359 15-330 (347)
179 2dg1_A DRP35, lactonase; beta 99.8 2.4E-16 8.2E-21 135.9 34.0 258 16-286 22-296 (333)
180 1qks_A Cytochrome CD1 nitrite 99.8 3.4E-16 1.2E-20 143.0 36.1 287 48-361 165-478 (567)
181 2xdw_A Prolyl endopeptidase; a 99.8 2.3E-16 7.9E-21 150.0 34.3 244 40-304 126-416 (710)
182 2gop_A Trilobed protease; beta 99.8 3.1E-16 1.1E-20 136.1 28.2 239 19-301 41-330 (347)
183 3dsm_A Uncharacterized protein 99.8 5.5E-16 1.9E-20 133.1 28.6 259 59-359 16-301 (328)
184 3sjl_D Methylamine dehydrogena 99.8 7.5E-16 2.6E-20 132.3 28.9 289 43-361 37-364 (386)
185 2z2n_A Virginiamycin B lyase; 99.8 1.2E-14 4.1E-19 123.1 35.9 276 38-360 14-295 (299)
186 2xdw_A Prolyl endopeptidase; a 99.8 7.3E-16 2.5E-20 146.5 31.4 279 47-362 80-416 (710)
187 2bkl_A Prolyl endopeptidase; m 99.8 1.3E-16 4.3E-21 151.4 25.8 275 46-361 75-398 (695)
188 2bkl_A Prolyl endopeptidase; m 99.8 2.4E-16 8.3E-21 149.4 27.5 242 40-305 122-400 (695)
189 3dsm_A Uncharacterized protein 99.8 1.7E-15 5.7E-20 130.1 29.8 261 17-305 13-304 (328)
190 3e5z_A Putative gluconolactona 99.8 1.8E-15 6.2E-20 128.2 29.6 234 72-351 19-278 (296)
191 3e5z_A Putative gluconolactona 99.8 1.5E-15 5E-20 128.7 28.4 239 38-305 27-289 (296)
192 3no2_A Uncharacterized protein 99.8 2.4E-15 8.3E-20 125.4 27.7 219 49-289 4-230 (276)
193 3c5m_A Oligogalacturonate lyas 99.7 2.8E-16 9.7E-21 138.8 22.7 269 21-304 60-386 (396)
194 1rwi_B Serine/threonine-protei 99.7 1E-15 3.6E-20 127.8 24.9 241 40-305 25-267 (270)
195 3no2_A Uncharacterized protein 99.7 2.7E-15 9.2E-20 125.1 27.1 185 95-305 6-198 (276)
196 2mad_H Methylamine dehydrogena 99.7 1.8E-14 6.2E-19 125.4 33.4 287 45-363 27-353 (373)
197 1rwi_B Serine/threonine-protei 99.7 2.9E-15 1E-19 125.0 24.2 240 82-361 25-265 (270)
198 2qc5_A Streptogramin B lactona 99.7 2.5E-13 8.6E-18 115.0 35.0 276 38-358 19-298 (300)
199 3sjl_D Methylamine dehydrogena 99.7 6.7E-14 2.3E-18 120.2 29.2 261 20-305 58-366 (386)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 8.9E-14 3E-18 118.7 28.1 244 38-302 17-299 (314)
201 2mad_H Methylamine dehydrogena 99.7 5.5E-13 1.9E-17 116.1 33.0 258 22-305 48-353 (373)
202 2z2n_A Virginiamycin B lyase; 99.7 1.6E-12 5.3E-17 110.0 35.1 258 20-304 35-297 (299)
203 1yr2_A Prolyl oligopeptidase; 99.7 2.4E-14 8.2E-19 136.7 26.2 277 46-361 114-442 (741)
204 3c75_H MADH, methylamine dehyd 99.7 8.6E-14 2.9E-18 121.8 27.1 286 47-363 81-405 (426)
205 3hrp_A Uncharacterized protein 99.7 1.7E-13 5.7E-18 121.0 29.2 247 39-300 131-408 (409)
206 1yr2_A Prolyl oligopeptidase; 99.7 6.4E-14 2.2E-18 133.8 28.4 243 40-305 164-444 (741)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.3E-13 8E-18 116.1 28.7 244 80-361 17-300 (314)
208 3hrp_A Uncharacterized protein 99.6 1.4E-12 4.7E-17 115.2 31.4 251 81-359 131-409 (409)
209 3g4e_A Regucalcin; six bladed 99.6 1.2E-12 4E-17 110.8 29.0 231 40-290 14-262 (297)
210 1xip_A Nucleoporin NUP159; bet 99.6 2.3E-13 7.8E-18 117.4 24.2 239 39-299 38-309 (388)
211 3c75_H MADH, methylamine dehyd 99.6 5.6E-13 1.9E-17 116.6 26.8 261 21-305 99-405 (426)
212 2qc5_A Streptogramin B lactona 99.6 3E-11 1E-15 102.1 33.7 255 20-301 40-299 (300)
213 2ghs_A AGR_C_1268P; regucalcin 99.6 1.6E-11 5.5E-16 105.2 29.9 225 41-289 51-291 (326)
214 3q7m_A Lipoprotein YFGL, BAMB; 99.6 4.7E-11 1.6E-15 104.6 33.4 259 49-357 102-375 (376)
215 1kb0_A Quinohemoprotein alcoho 99.5 4.6E-12 1.6E-16 118.9 27.1 278 49-361 127-568 (677)
216 3iuj_A Prolyl endopeptidase; h 99.5 3.1E-12 1.1E-16 121.0 26.2 243 40-305 130-408 (693)
217 1mda_H Methylamine dehydrogena 99.5 2.1E-12 7.2E-17 111.2 20.9 263 61-361 47-347 (368)
218 3g4e_A Regucalcin; six bladed 99.5 6E-11 2E-15 100.2 29.6 231 79-347 11-259 (297)
219 1mda_H Methylamine dehydrogena 99.5 2.3E-12 7.8E-17 111.0 20.1 250 22-305 47-349 (368)
220 1kb0_A Quinohemoprotein alcoho 99.5 1.1E-11 3.8E-16 116.4 26.3 284 50-363 77-510 (677)
221 3hxj_A Pyrrolo-quinoline quino 99.5 1.5E-11 5.2E-16 105.6 25.0 288 17-361 36-325 (330)
222 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.6E-17 112.6 18.0 179 82-288 39-230 (388)
223 3iuj_A Prolyl endopeptidase; h 99.5 5.5E-12 1.9E-16 119.4 23.8 243 79-361 127-406 (693)
224 3dr2_A Exported gluconolactona 99.5 2.7E-11 9.3E-16 102.8 25.7 231 32-293 37-298 (305)
225 2qe8_A Uncharacterized protein 99.5 5.3E-11 1.8E-15 102.7 27.6 241 39-298 17-317 (343)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.2E-10 4.2E-15 101.9 29.9 263 49-362 52-339 (376)
227 1yiq_A Quinohemoprotein alcoho 99.5 2.3E-11 7.8E-16 114.5 26.0 262 49-344 120-532 (689)
228 1yiq_A Quinohemoprotein alcoho 99.5 3.9E-11 1.3E-15 112.9 25.6 282 50-362 70-507 (689)
229 3dr2_A Exported gluconolactona 99.4 1.6E-10 5.6E-15 98.0 26.3 239 73-354 37-301 (305)
230 2ghs_A AGR_C_1268P; regucalcin 99.4 6.3E-10 2.1E-14 95.2 29.0 224 82-347 50-289 (326)
231 2hz6_A Endoplasmic reticulum t 99.4 2E-13 7E-18 118.9 4.5 188 49-254 8-200 (369)
232 2hz6_A Endoplasmic reticulum t 99.4 8.6E-13 2.9E-17 115.0 7.7 181 95-305 10-195 (369)
233 2ece_A 462AA long hypothetical 99.4 7.6E-10 2.6E-14 95.9 25.2 232 48-286 93-397 (462)
234 1npe_A Nidogen, entactin; glyc 99.3 9.4E-09 3.2E-13 85.2 29.9 231 51-305 2-241 (267)
235 1fwx_A Nitrous oxide reductase 99.3 3.1E-10 1.1E-14 101.7 21.6 245 48-305 99-434 (595)
236 3hxj_A Pyrrolo-quinoline quino 99.3 8.3E-10 2.8E-14 94.6 23.4 219 50-303 107-325 (330)
237 1npe_A Nidogen, entactin; glyc 99.3 2.2E-08 7.5E-13 83.0 31.1 242 20-281 9-262 (267)
238 2qe8_A Uncharacterized protein 99.3 7.7E-10 2.6E-14 95.4 21.9 237 81-353 17-314 (343)
239 1fwx_A Nitrous oxide reductase 99.3 1.9E-09 6.4E-14 96.8 24.6 242 91-360 100-431 (595)
240 2iwa_A Glutamine cyclotransfer 99.3 6.7E-09 2.3E-13 84.6 24.9 219 70-304 9-239 (266)
241 1kv9_A Type II quinohemoprotei 99.2 8.7E-09 3E-13 96.7 27.8 280 50-362 66-490 (668)
242 2iwa_A Glutamine cyclotransfer 99.2 8.9E-09 3.1E-13 83.8 24.2 205 31-247 11-238 (266)
243 1w6s_A Methanol dehydrogenase 99.2 1.6E-08 5.3E-13 93.0 28.7 154 44-201 111-344 (599)
244 2ece_A 462AA long hypothetical 99.2 3.1E-08 1E-12 86.0 27.9 245 90-348 93-399 (462)
245 1kv9_A Type II quinohemoprotei 99.2 6.8E-09 2.3E-13 97.4 26.0 236 50-305 117-491 (668)
246 2ad6_A Methanol dehydrogenase 99.2 1.8E-08 6.3E-13 92.6 26.6 236 50-305 115-497 (571)
247 2ad6_A Methanol dehydrogenase 99.2 7.1E-08 2.4E-12 88.7 30.2 195 50-255 62-344 (571)
248 3nol_A Glutamine cyclotransfer 99.2 3.6E-08 1.2E-12 79.3 23.5 200 71-289 32-243 (262)
249 4a2l_A BT_4663, two-component 99.2 1E-06 3.6E-11 84.8 38.2 278 38-360 214-526 (795)
250 4a2l_A BT_4663, two-component 99.1 6.2E-07 2.1E-11 86.4 35.3 281 41-361 175-481 (795)
251 3nol_A Glutamine cyclotransfer 99.1 4.6E-08 1.6E-12 78.6 22.6 189 32-235 34-244 (262)
252 1w6s_A Methanol dehydrogenase 99.1 3.5E-07 1.2E-11 84.1 31.1 200 50-254 62-350 (599)
253 2fp8_A Strictosidine synthase; 99.1 2E-07 7E-12 79.4 27.7 242 39-303 19-314 (322)
254 3nok_A Glutaminyl cyclase; bet 99.1 5E-08 1.7E-12 78.4 21.7 188 31-233 45-253 (268)
255 1flg_A Protein (quinoprotein e 99.1 1.9E-07 6.4E-12 86.0 28.3 151 50-201 117-357 (582)
256 3mbr_X Glutamine cyclotransfer 99.0 6.2E-07 2.1E-11 71.5 25.4 189 32-233 12-222 (243)
257 1flg_A Protein (quinoprotein e 99.0 1.6E-06 5.5E-11 79.8 31.2 195 51-255 69-364 (582)
258 3mbr_X Glutamine cyclotransfer 99.0 8.1E-07 2.8E-11 70.9 25.2 201 71-289 10-222 (243)
259 2p4o_A Hypothetical protein; p 99.0 4.3E-06 1.5E-10 70.6 30.4 231 38-289 31-277 (306)
260 3v64_C Agrin; beta propeller, 99.0 8.8E-06 3E-10 70.0 32.0 242 39-305 34-278 (349)
261 3nok_A Glutaminyl cyclase; bet 99.0 2.8E-07 9.5E-12 74.1 20.6 199 71-289 44-253 (268)
262 3v65_B Low-density lipoprotein 98.9 5.7E-06 1.9E-10 72.3 30.8 239 42-305 80-321 (386)
263 3v9f_A Two-component system se 98.9 2.6E-06 9E-11 81.8 31.1 282 38-361 257-569 (781)
264 1ijq_A LDL receptor, low-densi 98.9 1E-05 3.4E-10 68.6 31.3 227 19-254 8-246 (316)
265 1ijq_A LDL receptor, low-densi 98.9 1.6E-05 5.4E-10 67.4 32.3 232 52-305 3-241 (316)
266 3v9f_A Two-component system se 98.9 5.1E-06 1.7E-10 79.9 32.2 278 39-360 211-524 (781)
267 3v64_C Agrin; beta propeller, 98.9 1.1E-05 3.9E-10 69.3 31.1 226 20-254 52-283 (349)
268 3v65_B Low-density lipoprotein 98.9 4.9E-06 1.7E-10 72.6 28.5 227 19-254 94-326 (386)
269 2fp8_A Strictosidine synthase; 98.9 4E-06 1.4E-10 71.4 27.4 237 82-360 20-313 (322)
270 3qqz_A Putative uncharacterize 98.9 7.5E-06 2.5E-10 66.3 26.2 204 33-244 20-251 (255)
271 3qqz_A Putative uncharacterize 98.9 1.5E-05 5.2E-10 64.5 27.9 215 75-300 21-251 (255)
272 3p5b_L Low density lipoprotein 98.8 3.5E-05 1.2E-09 67.6 32.0 229 20-254 91-328 (400)
273 1k3i_A Galactose oxidase precu 98.8 3.2E-07 1.1E-11 86.3 20.2 243 43-305 190-500 (656)
274 3tc9_A Hypothetical hydrolase; 98.8 5.6E-06 1.9E-10 73.3 26.7 255 40-301 138-429 (430)
275 2xe4_A Oligopeptidase B; hydro 98.8 6.9E-06 2.4E-10 78.3 28.7 193 40-244 175-398 (751)
276 4hw6_A Hypothetical protein, I 98.8 1.4E-05 4.6E-10 70.9 28.1 255 40-301 140-432 (433)
277 3p5b_L Low density lipoprotein 98.7 9.4E-05 3.2E-09 64.8 33.5 232 52-305 85-323 (400)
278 2p4o_A Hypothetical protein; p 98.7 4E-05 1.4E-09 64.6 26.6 209 70-301 22-241 (306)
279 3sov_A LRP-6, low-density lipo 98.7 8.8E-05 3E-09 62.7 28.4 228 18-254 10-246 (318)
280 3m0c_C LDL receptor, low-densi 98.6 0.00017 5.7E-09 68.6 31.0 207 38-253 423-639 (791)
281 3sov_A LRP-6, low-density lipo 98.6 0.00017 5.7E-09 61.0 28.2 229 52-305 6-241 (318)
282 1n7d_A LDL receptor, low-densi 98.6 1.7E-06 5.7E-11 81.6 15.8 230 19-254 384-622 (699)
283 3m0c_C LDL receptor, low-densi 98.6 0.00039 1.3E-08 66.1 31.8 232 52-305 397-635 (791)
284 3amr_A 3-phytase; beta-propell 98.5 0.00027 9.4E-09 59.4 29.9 199 49-254 39-272 (355)
285 3kya_A Putative phosphatase; s 98.5 0.00027 9.4E-09 62.8 28.1 257 41-304 141-477 (496)
286 2xzh_A Clathrin heavy chain 1; 98.5 0.00029 1E-08 58.2 29.9 261 22-305 50-335 (365)
287 3ei3_A DNA damage-binding prot 98.5 0.0014 4.7E-08 65.2 38.6 288 38-361 553-914 (1158)
288 1bpo_A Protein (clathrin); cla 98.5 0.00055 1.9E-08 58.9 29.3 262 21-305 48-334 (494)
289 3tc9_A Hypothetical hydrolase; 98.4 0.00022 7.4E-09 63.2 25.4 152 82-245 138-300 (430)
290 4hw6_A Hypothetical protein, I 98.4 0.00025 8.6E-09 62.8 25.6 213 21-245 162-432 (433)
291 1k3i_A Galactose oxidase precu 98.4 8.9E-06 3E-10 76.4 16.5 113 85-200 190-324 (656)
292 1n7d_A LDL receptor, low-densi 98.4 5E-06 1.7E-10 78.3 13.6 225 59-305 385-617 (699)
293 4a0p_A LRP6, LRP-6, low-densit 98.3 0.002 6.9E-08 59.8 32.5 229 52-305 8-240 (628)
294 3amr_A 3-phytase; beta-propell 98.3 0.00013 4.3E-09 61.5 18.8 193 136-360 40-263 (355)
295 2xbg_A YCF48-like protein; pho 98.3 0.0014 4.8E-08 55.7 31.2 275 38-357 35-319 (327)
296 2xe4_A Oligopeptidase B; hydro 98.2 0.00058 2E-08 65.1 24.8 171 21-197 201-398 (751)
297 4a0p_A LRP6, LRP-6, low-densit 98.2 0.004 1.4E-07 57.9 31.8 227 17-253 11-244 (628)
298 3ott_A Two-component system se 98.1 0.0085 2.9E-07 57.3 30.6 232 38-305 21-263 (758)
299 3s94_A LRP-6, low-density lipo 97.9 0.013 4.3E-07 54.4 35.0 288 38-361 170-511 (619)
300 3s94_A LRP-6, low-density lipo 97.9 0.013 4.6E-07 54.2 35.4 158 39-201 84-245 (619)
301 2ism_A Putative oxidoreductase 97.9 0.0091 3.1E-07 51.2 28.2 232 38-293 30-337 (352)
302 2vpj_A Kelch-like protein 12; 97.8 0.0033 1.1E-07 52.5 19.6 188 49-249 14-234 (301)
303 3kya_A Putative phosphatase; s 97.8 0.016 5.6E-07 51.6 28.8 262 83-361 141-476 (496)
304 2p9w_A MAL S 1 allergenic prot 97.8 0.0076 2.6E-07 50.3 20.2 155 82-246 14-215 (334)
305 3ei3_A DNA damage-binding prot 97.8 0.038 1.3E-06 55.1 31.1 219 17-246 711-999 (1158)
306 2xbg_A YCF48-like protein; pho 97.8 0.015 5E-07 49.3 28.2 235 39-300 80-320 (327)
307 2p9w_A MAL S 1 allergenic prot 97.7 0.015 5.1E-07 48.5 28.7 155 40-198 14-214 (334)
308 2xn4_A Kelch-like protein 2; s 97.7 0.012 4E-07 49.2 20.7 185 51-248 17-231 (302)
309 2ism_A Putative oxidoreductase 97.7 0.021 7.2E-07 48.9 28.6 149 81-235 31-222 (352)
310 2g8s_A Glucose/sorbosone dehyd 97.7 0.021 7.3E-07 48.9 28.5 243 39-296 18-348 (353)
311 1xi4_A Clathrin heavy chain; a 97.6 0.0095 3.2E-07 59.3 20.9 261 22-305 49-334 (1630)
312 3ii7_A Kelch-like protein 7; p 97.6 0.016 5.5E-07 48.5 20.4 185 51-248 13-227 (306)
313 2vpj_A Kelch-like protein 12; 97.5 0.026 8.9E-07 47.0 20.3 187 49-248 62-280 (301)
314 3sre_A PON1, serum paraoxonase 97.5 0.031 1.1E-06 47.6 19.9 197 40-244 51-296 (355)
315 3ii7_A Kelch-like protein 7; p 97.4 0.043 1.5E-06 45.8 20.1 187 49-248 55-274 (306)
316 3a9g_A Putative uncharacterize 97.3 0.064 2.2E-06 45.9 28.8 234 38-288 28-329 (354)
317 3pbp_A Nucleoporin NUP82; beta 97.3 0.042 1.4E-06 47.4 18.6 157 135-298 31-208 (452)
318 2xn4_A Kelch-like protein 2; s 97.2 0.066 2.3E-06 44.5 20.2 185 49-248 61-278 (302)
319 1zgk_A Kelch-like ECH-associat 97.2 0.047 1.6E-06 45.6 18.7 187 47-248 22-242 (308)
320 4asc_A Kelch repeat and BTB do 97.2 0.073 2.5E-06 44.6 20.2 181 52-248 7-223 (315)
321 2be1_A Serine/threonine-protei 97.2 0.011 3.6E-07 50.0 14.2 194 51-251 11-236 (339)
322 3a9g_A Putative uncharacterize 97.2 0.088 3E-06 45.0 29.8 147 81-233 29-215 (354)
323 3pbp_A Nucleoporin NUP82; beta 97.2 0.088 3E-06 45.5 19.4 144 46-195 28-208 (452)
324 1tl2_A L10, protein (tachylect 97.2 0.03 1E-06 43.6 14.8 174 168-370 41-218 (236)
325 1bpo_A Protein (clathrin); cla 97.1 0.12 4E-06 44.9 30.5 221 59-305 47-292 (494)
326 2uvk_A YJHT; unknown function, 97.1 0.1 3.6E-06 44.5 19.6 65 49-116 19-98 (357)
327 2xzh_A Clathrin heavy chain 1; 97.0 0.11 3.7E-06 43.2 31.8 220 60-305 49-293 (365)
328 3ott_A Two-component system se 97.0 0.26 9E-06 47.0 32.1 237 40-302 192-448 (758)
329 3das_A Putative oxidoreductase 97.0 0.14 4.8E-06 43.4 28.2 237 38-293 31-330 (347)
330 1zgk_A Kelch-like ECH-associat 97.0 0.097 3.3E-06 43.7 18.0 185 49-248 70-289 (308)
331 2be1_A Serine/threonine-protei 96.8 0.021 7E-07 48.2 12.6 106 95-201 11-132 (339)
332 1tl2_A L10, protein (tachylect 96.8 0.082 2.8E-06 41.2 14.7 143 39-193 41-204 (236)
333 4asc_A Kelch repeat and BTB do 96.7 0.23 7.8E-06 41.6 20.1 144 47-200 43-222 (315)
334 3sre_A PON1, serum paraoxonase 96.6 0.29 9.8E-06 41.7 23.5 191 82-299 51-295 (355)
335 1xi4_A Clathrin heavy chain; a 96.6 0.37 1.3E-05 48.5 20.5 228 59-305 47-292 (1630)
336 3sbq_A Nitrous-oxide reductase 96.5 0.46 1.6E-05 42.7 25.9 242 52-303 72-409 (638)
337 2woz_A Kelch repeat and BTB do 96.2 0.47 1.6E-05 39.7 18.8 146 47-200 54-232 (318)
338 2uvk_A YJHT; unknown function, 95.6 0.89 3E-05 38.6 19.6 142 104-254 168-350 (357)
339 2woz_A Kelch repeat and BTB do 95.6 0.83 2.8E-05 38.1 21.1 139 96-248 18-186 (318)
340 1cru_A Protein (soluble quinop 95.5 1.2 4.1E-05 39.4 30.3 106 38-144 26-163 (454)
341 3das_A Putative oxidoreductase 95.5 1 3.4E-05 38.2 29.0 105 80-187 31-158 (347)
342 2zwa_A Leucine carboxyl methyl 95.3 1.7 5.8E-05 40.9 18.6 198 48-250 396-639 (695)
343 2g8s_A Glucose/sorbosone dehyd 94.9 1.6 5.4E-05 37.2 25.8 147 82-232 19-214 (353)
344 3sbq_A Nitrous-oxide reductase 94.7 2.4 8.2E-05 38.2 20.6 194 49-246 141-408 (638)
345 3qhy_B Beta-lactamase inhibito 94.3 1.9 6.4E-05 35.3 20.0 223 39-302 24-246 (282)
346 3s25_A Hypothetical 7-bladed b 93.6 2.7 9.2E-05 34.8 19.7 142 131-304 59-218 (302)
347 2zwa_A Leucine carboxyl methyl 93.5 5.1 0.00018 37.7 19.8 149 95-248 399-579 (695)
348 3b7f_A Glycosyl hydrolase, BNR 92.0 5.5 0.00019 34.3 24.1 190 38-234 54-297 (394)
349 3qhy_B Beta-lactamase inhibito 91.2 5.3 0.00018 32.6 21.1 185 81-303 24-208 (282)
350 3no0_A DNA gyrase subunit A; D 89.6 7.4 0.00025 31.7 22.6 198 38-245 23-245 (276)
351 4gq2_M Nucleoporin NUP120; bet 89.5 13 0.00044 36.5 15.9 39 82-122 237-275 (950)
352 1cru_A Protein (soluble quinop 88.6 12 0.00042 33.0 24.2 104 81-187 27-162 (454)
353 3uc1_A DNA gyrase subunit A; D 87.6 11 0.00039 31.4 21.0 156 38-198 94-278 (327)
354 3b7f_A Glycosyl hydrolase, BNR 87.0 14 0.00047 31.8 22.8 143 40-187 116-297 (394)
355 3s25_A Hypothetical 7-bladed b 86.8 12 0.00041 30.9 26.1 214 47-304 22-257 (302)
356 4gq2_M Nucleoporin NUP120; bet 85.3 21 0.00072 35.0 14.6 39 216-255 237-275 (950)
357 2wg3_C Hedgehog-interacting pr 82.3 26 0.00089 31.0 30.6 104 39-144 14-158 (463)
358 3uc1_A DNA gyrase subunit A; D 82.1 21 0.00073 29.8 23.6 228 12-245 4-278 (327)
359 4hvt_A Ritya.17583.B, post-pro 80.8 38 0.0013 31.9 28.3 241 41-301 131-429 (711)
360 2wg3_C Hedgehog-interacting pr 80.1 31 0.0011 30.5 14.5 112 168-291 14-159 (463)
361 3q6k_A 43.2 kDa salivary prote 75.4 38 0.0013 29.0 23.7 139 105-246 124-306 (381)
362 4fhn_B Nucleoporin NUP120; pro 70.7 23 0.00079 35.6 10.1 39 82-122 239-277 (1139)
363 4fhn_B Nucleoporin NUP120; pro 66.0 25 0.00085 35.4 9.2 39 216-255 239-277 (1139)
364 3f7f_A Nucleoporin NUP120; nuc 65.1 66 0.0022 30.2 11.0 29 227-255 231-259 (729)
365 3f7f_A Nucleoporin NUP120; nuc 64.8 69 0.0024 30.1 11.0 37 82-122 223-259 (729)
366 3zwu_A Alkaline phosphatase PH 60.1 47 0.0016 30.4 9.1 60 82-143 477-549 (592)
367 1zi0_A DNA gyrase subunit A; b 59.9 72 0.0025 26.2 26.1 225 13-245 5-276 (307)
368 1wp5_A Topoisomerase IV; broke 58.8 78 0.0027 26.3 26.7 185 12-198 6-224 (323)
369 3kci_A Probable E3 ubiquitin-p 56.6 93 0.0032 26.5 23.2 156 82-245 54-240 (389)
370 1sqj_A OXG-RCBH, oligoxylogluc 53.1 1.6E+02 0.0054 28.1 18.3 152 38-193 14-195 (789)
371 4a9v_A PHOX; hydrolase, beta-p 52.8 78 0.0027 28.8 9.0 60 39-100 476-548 (592)
372 4a9v_A PHOX; hydrolase, beta-p 51.4 98 0.0033 28.2 9.4 62 81-144 476-550 (592)
373 1suu_A DNA gyrase subunit A; t 50.9 1E+02 0.0035 25.4 25.9 181 11-198 8-230 (312)
374 3zwu_A Alkaline phosphatase PH 44.9 89 0.003 28.6 8.3 58 127-185 478-547 (592)
375 1sqj_A OXG-RCBH, oligoxylogluc 43.6 2.2E+02 0.0077 27.1 21.4 153 80-236 14-190 (789)
376 1zi0_A DNA gyrase subunit A; b 39.7 1.6E+02 0.0053 24.2 26.5 190 48-245 1-225 (307)
377 3no0_A DNA gyrase subunit A; D 39.3 1.5E+02 0.0051 23.9 23.2 158 81-246 24-196 (276)
378 3l6v_A GYRA, DNA gyrase subuni 38.7 1.8E+02 0.0062 24.7 28.0 186 10-198 6-264 (370)
379 3kci_A Probable E3 ubiquitin-p 36.2 2E+02 0.0068 24.4 27.0 224 12-245 11-292 (389)
380 3al9_A Plexin-A2; beta-propell 34.8 78 0.0027 28.6 6.3 74 272-355 402-476 (539)
381 3l6v_A GYRA, DNA gyrase subuni 34.6 2.1E+02 0.0073 24.2 26.8 146 46-198 3-179 (370)
382 3ol2_B Plexin-B1; beta-propell 34.3 1.2E+02 0.0041 27.3 7.3 60 285-356 402-462 (528)
383 2zux_A YESW protein; beta-prop 33.3 2.8E+02 0.0096 25.2 26.3 180 60-254 151-408 (591)
384 3q6k_A 43.2 kDa salivary prote 32.7 2.3E+02 0.008 24.1 21.4 136 61-199 124-306 (381)
385 2cn3_A Xyloglucanase, beta-1,4 28.8 3.7E+02 0.013 25.3 15.5 165 81-247 23-230 (737)
386 4d9s_A UVB-resistance protein 28.7 2.7E+02 0.0094 23.7 29.1 154 81-245 68-252 (406)
387 1suu_A DNA gyrase subunit A; t 27.7 2.5E+02 0.0087 23.0 27.5 190 48-246 6-231 (312)
388 1zvt_A Topoisomerase IV subuni 27.3 2.3E+02 0.008 22.4 16.2 158 182-361 4-164 (256)
389 1wp5_A Topoisomerase IV; broke 27.0 2.7E+02 0.0092 23.0 26.3 192 48-246 3-225 (323)
390 3al9_A Plexin-A2; beta-propell 24.9 2.4E+02 0.0082 25.5 7.7 69 82-150 401-476 (539)
391 4fww_A Macrophage-stimulating 21.8 2.7E+02 0.0092 25.0 7.5 74 271-355 406-479 (527)
392 2zuy_A YESX protein; beta-prop 21.6 4.7E+02 0.016 24.0 21.8 179 61-255 156-413 (620)
393 1q47_A Semaphorin 3A; beta pro 20.6 3.2E+02 0.011 24.4 7.5 27 269-297 461-487 (495)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-51 Score=367.65 Aligned_cols=289 Identities=19% Similarity=0.289 Sum_probs=267.0
Q ss_pred eeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 32 IQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
...+.+ .+.|++++|+|++.+|++|+.||+|+|||+.+++....+.+|...|.+++|+|++ ++|++|+.|++|++||
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~--~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSG--KLLASCSADMTIKLWD 178 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTS--SEEEEEETTSCCCEEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCC--CEEEEEeCCCeEEEEe
Confidence 344556 8899999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred ccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+.+++++..+.+|...|.+++|+|++..+++++.|+.|++||++++..+..+. +|...|.++.++|++. +|++|+.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~-~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGT-LIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCC-EEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999998 8999999999999995 999999999
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceeeEEEecCC-------------------CcEEEEEecCCcEEEEEcCCCceeE
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET-------------------NKHLWCLTHIETLSIWDWKDGQNVA 251 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------~~~l~~~~~d~~i~i~d~~~~~~~~ 251 (389)
.|++||++++ .....+..|...|.+++|+|.. +.+|++++.|+.|++||+++++++.
T Consensus 257 ~v~vwd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 257 TVRVWVVATK----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp CEEEEETTTC----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred eEEEEECCCC----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 9999999854 4556677899999999999532 5689999999999999999999999
Q ss_pred EeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCc
Q 016457 252 SFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPS 331 (389)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 331 (389)
.+.+ |...|.+++|+|+++ +|++|+.||.|++||+.+++. +..+. +|...|.++
T Consensus 333 ~~~~------------h~~~v~~v~~~~~g~--~l~s~s~D~~i~vwd~~~~~~------~~~~~-~h~~~v~~l----- 386 (410)
T 1vyh_C 333 TLVG------------HDNWVRGVLFHSGGK--FILSCADDKTLRVWDYKNKRC------MKTLN-AHEHFVTSL----- 386 (410)
T ss_dssp EEEC------------CSSCEEEEEECSSSS--CEEEEETTTEEEEECCTTSCC------CEEEE-CCSSCEEEE-----
T ss_pred EEEC------------CCCcEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCce------EEEEc-CCCCcEEEE-----
Confidence 8887 779999999999999 889999999999999988765 67775 999999999
Q ss_pred ccCCCCCCCceeEEEecCCCeEEEEec
Q 016457 332 VQGRPAQSHGIFGWTGGEDGRLCCWLS 358 (389)
Q Consensus 332 ~~~~~~s~~~~~l~s~~~dg~v~iW~~ 358 (389)
+|+|++.+|+||+.||+|++|++
T Consensus 387 ----~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 387 ----DFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ----EECSSSSCEEEEETTSEEEEEC-
T ss_pred ----EEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999999999999999999986
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.3e-50 Score=347.71 Aligned_cols=289 Identities=14% Similarity=0.203 Sum_probs=261.2
Q ss_pred eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 31 SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
...++.+ .+.|++++|+|++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++ ++|++|+.|+.|++|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~d~~v~iw 124 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG--NYVACGGLDNICSIY 124 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTS--SEEEEEETTCEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCC--CEEEEEeCCCeEEEE
Confidence 4566777 8999999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred EccCC----eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 110 DTRSF----HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 110 d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
++.+. .....+.+|...|.++.|+++ +.+++++.|+.|++||+++++.+..+. +|...|.+++|+|++. ++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTR-LFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCC-EEEE
Confidence 99865 466778899999999999954 568999999999999999999999998 8999999999999995 9999
Q ss_pred EeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCcc
Q 016457 186 ASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWT 265 (389)
Q Consensus 186 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
|+.|+.|++||++++ .....+..|...|.+++|+ +++.+|++++.|+.|++||+++++.+..+....
T Consensus 202 g~~d~~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-------- 268 (340)
T 1got_B 202 GACDASAKLWDVREG----MCRQTFTGHESDINAICFF-PNGNAFATGSDDATCRLFDLRADQELMTYSHDN-------- 268 (340)
T ss_dssp EETTSCEEEEETTTC----SEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTT--------
T ss_pred EeCCCcEEEEECCCC----eeEEEEcCCcCCEEEEEEc-CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC--------
Confidence 999999999999854 4566777899999999999 788999999999999999999988877765322
Q ss_pred CCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEE
Q 016457 266 LDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGW 345 (389)
Q Consensus 266 ~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~ 345 (389)
+...+.+++|+|+++ +|++|+.||.|++||+.+++. +..+. +|...|.++ +|+|+|.+|+
T Consensus 269 --~~~~v~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~------~~~~~-~h~~~v~~~---------~~s~dg~~l~ 328 (340)
T 1got_B 269 --IICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADR------AGVLA-GHDNRVSCL---------GVTDDGMAVA 328 (340)
T ss_dssp --CCSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCE------EEEEE-CCSSCEEEE---------EECTTSSCEE
T ss_pred --cccceEEEEECCCCC--EEEEECCCCeEEEEEcccCcE------eeEee-cCCCcEEEE---------EEcCCCCEEE
Confidence 345799999999999 899999999999999988765 56665 999999999 9999999999
Q ss_pred EecCCCeEEEEe
Q 016457 346 TGGEDGRLCCWL 357 (389)
Q Consensus 346 s~~~dg~v~iW~ 357 (389)
||+.||.|++|+
T Consensus 329 s~s~D~~i~iWd 340 (340)
T 1got_B 329 TGSWDSFLKIWN 340 (340)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCccEEecC
Confidence 999999999996
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-50 Score=345.26 Aligned_cols=288 Identities=15% Similarity=0.260 Sum_probs=261.0
Q ss_pred eeeec-CcceEEEeecCC----CCeEEEEecCCeEEEEeCCCcee--eeeecCCCCcEEEEEEeCCCCCCEEEEEecCCe
Q 016457 33 QTNFG-DDYVFEIVPKND----WSLMAVSLSTNVVKLYSPVTGQY--SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105 (389)
Q Consensus 33 ~~~~~-~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~ 105 (389)
+.+.+ .+.|++++|+|+ +.+|++|+.|++|+||++.+++. ...+.+|...|.+++|++++ .++++++.|++
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~--~~l~s~s~D~~ 103 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTL--PIAASSSLDAH 103 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSS--SEEEEEETTSE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCC--CEEEEEeCCCc
Confidence 34445 899999999985 56899999999999999887653 45688999999999999998 79999999999
Q ss_pred EEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 106 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
|++||+.+++.+..+..+...+.+++|+|++..+++++.|+.|++||+++++....+. .|...+.+++|+|+++ +|++
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~-~las 181 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGK-YLAS 181 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSS-EEEE
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCC-EEEE
Confidence 9999999999999999998999999999999999999999999999999999988888 7889999999999996 9999
Q ss_pred EeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCcc
Q 016457 186 ASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWT 265 (389)
Q Consensus 186 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
|+.|+.|++||++++ ..+..+..|..+|.+++|+ +++.+|++++.|+.|++||+++++....+.+
T Consensus 182 g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~s-pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------- 246 (321)
T 3ow8_A 182 GAIDGIINIFDIATG----KLLHTLEGHAMPIRSLTFS-PDSQLLVTASDDGYIKIYDVQHANLAGTLSG---------- 246 (321)
T ss_dssp EETTSCEEEEETTTT----EEEEEECCCSSCCCEEEEC-TTSCEEEEECTTSCEEEEETTTCCEEEEECC----------
T ss_pred EcCCCeEEEEECCCC----cEEEEEcccCCceeEEEEc-CCCCEEEEEcCCCeEEEEECCCcceeEEEcC----------
Confidence 999999999999854 4566777899999999999 7889999999999999999999998888876
Q ss_pred CCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEE
Q 016457 266 LDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGW 345 (389)
Q Consensus 266 ~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~ 345 (389)
|...|.+++|+|+++ +|++|+.||.|++||+.+++. +..+. +|...|.++ +|+|++++|+
T Consensus 247 --h~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~~------~~~~~-~h~~~v~~v---------~~s~~g~~l~ 306 (321)
T 3ow8_A 247 --HASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRTC------VHTFF-DHQDQVWGV---------KYNGNGSKIV 306 (321)
T ss_dssp --CSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEE------EEEEC-CCSSCEEEE---------EECTTSSEEE
T ss_pred --CCCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCEE------EEEEc-CCCCcEEEE---------EECCCCCEEE
Confidence 779999999999999 889999999999999998776 66665 899999999 9999999999
Q ss_pred EecCCCeEEEEecc
Q 016457 346 TGGEDGRLCCWLSD 359 (389)
Q Consensus 346 s~~~dg~v~iW~~~ 359 (389)
+++.||.|++|++.
T Consensus 307 s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 307 SVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTCCEEEEECC
T ss_pred EEeCCCeEEEEeCC
Confidence 99999999999974
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5e-49 Score=336.63 Aligned_cols=293 Identities=17% Similarity=0.191 Sum_probs=255.8
Q ss_pred eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 31 SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
..+++.+ .+.|++++|+|++++|++|+.||.|++||+.+++.+..+..|..+|.+++|+|++ ++|++|+.|++|++|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARK--NWIIVGSDDFRIRVF 82 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG--TEEEEEETTSEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCC--CEEEEECCCCEEEEE
Confidence 3456666 8899999999999999999999999999999999999999999999999999999 799999999999999
Q ss_pred EccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce-eeeeeecccCCeeEEEEecCCCCeEEEEeC
Q 016457 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ-VACLEESHVEDVTQVHFVPNNQNKVVSASV 188 (389)
Q Consensus 110 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 188 (389)
|+.+++.+..+.+|...|.+++|+|++..+++++.|+.|++||++++.. ...+. +|...|.+++|+|.+...|++|+.
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEEC-CCCSCEEEEEECTTCTTEEEEEET
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhc-ccCCcEEEEEECCCCCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998744 45565 899999999999964459999999
Q ss_pred CCcEEEEecCCCCCCCccceeeeccCCceeeEEEec-CCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCC
Q 016457 189 DGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFG-ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLD 267 (389)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 267 (389)
|+.|++||+++.. ........+...+..+.|+| +++.+|++++.|++|++||+++++++..+.+
T Consensus 162 D~~v~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~------------ 226 (304)
T 2ynn_A 162 DRTVKVWSLGQST---PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG------------ 226 (304)
T ss_dssp TSEEEEEETTCSS---CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC------------
T ss_pred CCeEEEEECCCCC---ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC------------
Confidence 9999999998542 12222334567889999985 3677999999999999999999999999987
Q ss_pred CCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCce--eEE
Q 016457 268 DVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI--FGW 345 (389)
Q Consensus 268 ~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~--~l~ 345 (389)
|...|..++|+|+++ +|++|+.||.|++||+.+++. +..+. .|...+.++ +|+|++. +++
T Consensus 227 h~~~v~~~~~~p~~~--~l~s~s~Dg~i~iWd~~~~~~------~~~~~-~~~~~~~~~---------~~~~~~~~~~~a 288 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSSTYKV------EKTLN-VGLERSWCI---------ATHPTGRKNYIA 288 (304)
T ss_dssp CSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCCE------EEEEC-CSSSSEEEE---------EECTTCGGGCEE
T ss_pred CCCCEEEEEECCCCC--EEEEEcCCCeEEEEECCCCce------eeecc-CCCccEEEE---------EECCCCCceEEE
Confidence 779999999999999 899999999999999998876 56665 888899999 8888775 578
Q ss_pred EecCCCeEEEEeccC
Q 016457 346 TGGEDGRLCCWLSDD 360 (389)
Q Consensus 346 s~~~dg~v~iW~~~~ 360 (389)
+|+.|| +.+|++..
T Consensus 289 sg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 289 SGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEETTE-EEEEECC-
T ss_pred EecCCc-eEEEEecc
Confidence 877555 66787753
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.2e-50 Score=348.65 Aligned_cols=298 Identities=12% Similarity=0.091 Sum_probs=240.4
Q ss_pred EEEEecCceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc-----------eeeeeecCCCCcEEEEEEeC
Q 016457 23 IKRFGLKNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG-----------QYSGECKGHSSTVNQISFSG 90 (389)
Q Consensus 23 i~~w~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-----------~~~~~~~~~~~~v~~i~~~~ 90 (389)
.+.|++.... ... ...|.+++|+|||++|++++ |+++++||.... ........|...|.+++|+|
T Consensus 16 ~r~w~~~~~~--~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 92 (344)
T 4gqb_B 16 AREWNLPPNA--PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG 92 (344)
T ss_dssp -------CCS--CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET
T ss_pred ccccCCCCCC--cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC
Confidence 4677764321 112 56799999999999998887 778888873211 11112223667899999999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCeEEE----EEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecc
Q 016457 91 PSTPHVLHSCSSDGTIRAWDTRSFHEVW----SVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166 (389)
Q Consensus 91 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (389)
++ .|++|+.||+|+|||+.+++.+. .+.+|...|++++|+|++..|++++.|+.|++||+++++.+..+. +|
T Consensus 93 d~---~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~-~h 168 (344)
T 4gqb_B 93 ER---GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR-AH 168 (344)
T ss_dssp TT---EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CC
T ss_pred CC---eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc-Cc
Confidence 86 78999999999999999886543 345799999999999999999999999999999999999999998 89
Q ss_pred cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceee--eccCCceeeEEEecCCCcEEEEEecCCcEEEEEc
Q 016457 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV--INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDW 244 (389)
Q Consensus 167 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~ 244 (389)
...|++++|+|++..+|++++.|+.|++||++++. ....+ ..+...+.+++|+|.++.+|++++.|+.|++||+
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK----PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS----CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccc----eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 99999999999987689999999999999999653 23322 3355678999999778889999999999999999
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeee
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVR 324 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~ 324 (389)
++++++..+.+ |...|.+++|+|++.+ +|++|+.||.|+|||+.+++. ..+. +|...|+
T Consensus 245 ~~~~~~~~~~~------------h~~~v~~v~fsp~g~~-~lasgs~D~~i~vwd~~~~~~-------~~~~-~H~~~V~ 303 (344)
T 4gqb_B 245 KSTSCVLSSAV------------HSQCVTGLVFSPHSVP-FLASLSEDCSLAVLDSSLSEL-------FRSQ-AHRDFVR 303 (344)
T ss_dssp CC--CCEEEEC------------CSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTCCEE-------EEEC-CCSSCEE
T ss_pred CCCcEEEEEcC------------CCCCEEEEEEccCCCe-EEEEEeCCCeEEEEECCCCcE-------EEEc-CCCCCEE
Confidence 99999999987 7799999999999854 689999999999999998765 5554 9999999
Q ss_pred eccCCCcccCCCCCCCcee-EEEecCCCeEEEEeccCC
Q 016457 325 SVLPMPSVQGRPAQSHGIF-GWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 325 ~~~~~~~~~~~~~s~~~~~-l~s~~~dg~v~iW~~~~~ 361 (389)
++ +|+|+++. |+|||.||+|++|+++..
T Consensus 304 ~v---------~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 304 DA---------TWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EE---------EECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EE---------EEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99 99999874 679999999999999764
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-50 Score=352.23 Aligned_cols=306 Identities=13% Similarity=0.129 Sum_probs=241.1
Q ss_pred CCCCeEEEEecCceeeeeec-CcceEEEeecCCCCeEEEEec------CCeEEEEeCCCceeee----eecCCCCcEEEE
Q 016457 18 DNVNSIKRFGLKNSIQTNFG-DDYVFEIVPKNDWSLMAVSLS------TNVVKLYSPVTGQYSG----ECKGHSSTVNQI 86 (389)
Q Consensus 18 ~~~~~i~~w~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~----~~~~~~~~v~~i 86 (389)
+.+.....|++... ...+ ...|++++|+|||++||+|+. |+.|++|+..++.... ...+|...|.++
T Consensus 23 ~g~~~~~~w~~p~~--~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 100 (357)
T 4g56_B 23 NGSSKGSAWGRPVT--APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDV 100 (357)
T ss_dssp -------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEE
T ss_pred CCCccccccCCCCC--CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEE
Confidence 34455677775421 1223 788999999999999999997 7789999987765433 335688999999
Q ss_pred EEeCCCCCCEEEEEecCCeEEEEEccCCeEEE----EEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeee
Q 016457 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW----SVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACL 162 (389)
Q Consensus 87 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 162 (389)
+|+|++ .+++++.||+|+|||+.+++... ...+|...|++++|+|++..|++++.|+.|++||+++++.+..+
T Consensus 101 ~~s~d~---~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 101 AWVSEK---GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp EEETTT---EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEcCCC---CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999987 67788899999999998876543 34478899999999999999999999999999999999999999
Q ss_pred eecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEE
Q 016457 163 EESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW 242 (389)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~ 242 (389)
. +|...|++++|+|+++.++++++.|+.|++||++++.. ........+...+.+++|+|.++.+|++++.|+.|++|
T Consensus 178 ~-~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 178 N-AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP--ATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp C-CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC--BCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred c-CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce--eeeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 8 89999999999999866899999999999999996531 11223344667899999997677899999999999999
Q ss_pred EcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEeccccee
Q 016457 243 DWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAV 322 (389)
Q Consensus 243 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~ 322 (389)
|+++++.+..+.. |...|.+++|+|++.+ +|++|+.||.|+|||+.+++. .... +|...
T Consensus 255 d~~~~~~~~~~~~------------~~~~v~~l~~sp~~~~-~lasgs~D~~i~iwd~~~~~~-------~~~~-~H~~~ 313 (357)
T 4g56_B 255 NIKNPDSAQTSAV------------HSQNITGLAYSYHSSP-FLASISEDCTVAVLDADFSEV-------FRDL-SHRDF 313 (357)
T ss_dssp ESSCGGGCEEECC------------CSSCEEEEEECSSSSC-CEEEEETTSCEEEECTTSCEE-------EEEC-CCSSC
T ss_pred ECCCCcEeEEEec------------cceeEEEEEEcCCCCC-EEEEEeCCCEEEEEECCCCcE-------eEEC-CCCCC
Confidence 9999999988886 6689999999999754 689999999999999998775 3444 89999
Q ss_pred eeeccCCCcccCCCCCC-CceeEEEecCCCeEEEEeccCC
Q 016457 323 VRSVLPMPSVQGRPAQS-HGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 323 v~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
|+++ +|+| ++.+|+|||.||+|++|++...
T Consensus 314 V~~v---------afsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 314 VTGV---------AWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEE---------EECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEE---------EEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9999 9998 8999999999999999999754
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.2e-49 Score=341.91 Aligned_cols=291 Identities=16% Similarity=0.193 Sum_probs=261.1
Q ss_pred ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEE
Q 016457 30 NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108 (389)
Q Consensus 30 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~i 108 (389)
+...++.+ .+.|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++ .+|++|+.|+.+++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g--~~lasg~~d~~i~v 132 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSG--CAIACGGLDNKCSV 132 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTS--SEEEEESTTSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCC--CEEEEeeCCCCEEE
Confidence 34567777 8999999999999999999999999999999999888899999999999999999 79999999999999
Q ss_pred EEccCC------eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecC--CC
Q 016457 109 WDTRSF------HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN--NQ 180 (389)
Q Consensus 109 wd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~ 180 (389)
|++... .....+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+. +|...|.+++|+|. +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g- 210 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETG- 210 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSC-
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCC-
Confidence 998643 3456778899999999999999999999999999999999999999998 89999999999885 4
Q ss_pred CeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccc
Q 016457 181 NKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLA 260 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 260 (389)
+.|++|+.||.|++||++++ ..+..+..|...|.+++|+ +++.+|++++.|++|++||++.++.+..+....
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~--- 282 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSG----QCVQAFETHESDVNSVRYY-PSGDAFASGSDDATCRLYDLRADREVAIYSKES--- 282 (354)
T ss_dssp CEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCTT---
T ss_pred CEEEEEeCCCeEEEEECCCC----cEEEEecCCCCCeEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC---
Confidence 59999999999999999954 4566777899999999999 778899999999999999999988777665432
Q ss_pred cCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCC
Q 016457 261 SDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSH 340 (389)
Q Consensus 261 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 340 (389)
+...+.+++|+|++. +|++|+.|+.|++||+.+++. +..+. +|...|.++ +|+|+
T Consensus 283 -------~~~~~~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~------~~~l~-~h~~~v~~l---------~~spd 337 (354)
T 2pbi_B 283 -------IIFGASSVDFSLSGR--LLFAGYNDYTINVWDVLKGSR------VSILF-GHENRVSTL---------RVSPD 337 (354)
T ss_dssp -------CCSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCSE------EEEEC-CCSSCEEEE---------EECTT
T ss_pred -------cccceeEEEEeCCCC--EEEEEECCCcEEEEECCCCce------EEEEE-CCCCcEEEE---------EECCC
Confidence 345788999999999 899999999999999988765 56665 999999999 99999
Q ss_pred ceeEEEecCCCeEEEEe
Q 016457 341 GIFGWTGGEDGRLCCWL 357 (389)
Q Consensus 341 ~~~l~s~~~dg~v~iW~ 357 (389)
|++|++|+.||+|++|+
T Consensus 338 g~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 338 GTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEETTSEEEEEC
T ss_pred CCEEEEEcCCCCEEecC
Confidence 99999999999999995
No 8
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.4e-48 Score=363.44 Aligned_cols=313 Identities=16% Similarity=0.178 Sum_probs=259.8
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec-------CCCCc
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK-------GHSST 82 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-------~~~~~ 82 (389)
..++++.|++|++|+.. +...++.+ .+.|++++|+|++++||+|+.|++|++||+.+++.+..+. +|.+.
T Consensus 162 ~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred EEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 37899999999999975 35566776 8899999999999999999999999999999998887774 79999
Q ss_pred EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE-------------------------------------------
Q 016457 83 VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS------------------------------------------- 119 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------------------------------- 119 (389)
|.+++|+|++ ++|++++.|++|++||+.+++.+..
T Consensus 242 V~~v~~spdg--~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 242 VFGLTWSPDG--TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319 (611)
T ss_dssp EEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEE
T ss_pred EEEEEECCCC--CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceE
Confidence 9999999999 7999999999999999988765543
Q ss_pred EEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee-----------------------------------
Q 016457 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE----------------------------------- 164 (389)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~----------------------------------- 164 (389)
+.+|...|++++|+|++..+++++.|+.|++||+.+++....+..
T Consensus 320 ~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~ 399 (611)
T 1nr0_A 320 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSG 399 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSS
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCcc
Confidence 346888999999999999999999999999999987644322100
Q ss_pred ----------------------------------------------cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 165 ----------------------------------------------SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 165 ----------------------------------------------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.|...+.+++|+|+++ +|++|+.|+.|++||+.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~ 478 (611)
T 1nr0_A 400 VDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLS 478 (611)
T ss_dssp SCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEE
T ss_pred ccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEcc
Confidence 1234577899999996 99999999999999998
Q ss_pred CCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC-CceeEEeecccccccCCccCCCCCceeeecc
Q 016457 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD-GQNVASFENARSLASDSWTLDDVDYFVDCHY 277 (389)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 277 (389)
++. ...... ..|...|.+++|+ |++++|++++.|++|++|++.+ ++........ .|...|.+++|
T Consensus 479 ~~~--~~~~~~-~~h~~~v~~v~fs-pdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~----------~H~~~V~~v~f 544 (611)
T 1nr0_A 479 GAS--VSEVKT-IVHPAEITSVAFS-NNGAFLVATDQSRKVIPYSVANNFELAHTNSWT----------FHTAKVACVSW 544 (611)
T ss_dssp TTE--EEEEEE-EECSSCEEEEEEC-TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC----------CCSSCEEEEEE
T ss_pred CCc--eeeeec-cCCCCceEEEEEC-CCCCEEEEEcCCCCEEEEEcCCCCceeeeeeee----------ecccceeEEEE
Confidence 431 111222 6788999999999 7899999999999999999987 5443321100 17799999999
Q ss_pred cCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEeccc-ceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEE
Q 016457 278 PGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGH-TAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCW 356 (389)
Q Consensus 278 ~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW 356 (389)
+|+|+ +|++|+.|+.|++|++.++.. .+.....+| ...|.++ +|+|+++ |++|+.||+|++|
T Consensus 545 spdg~--~lasgs~D~~v~lW~~~~~~~-----~~~~~~~~h~~~~v~~v---------~fs~d~~-l~s~~~D~~i~lW 607 (611)
T 1nr0_A 545 SPDNV--RLATGSLDNSVIVWNMNKPSD-----HPIIIKGAHAMSSVNSV---------IWLNETT-IVSAGQDSNIKFW 607 (611)
T ss_dssp CTTSS--EEEEEETTSCEEEEETTCTTS-----CCEEETTSSTTSCEEEE---------EEEETTE-EEEEETTSCEEEE
T ss_pred CCCCC--EEEEEECCCcEEEEECCCccc-----ccchhhccCcccCeeEE---------EEcCCCE-EEEecCCCCEEEE
Confidence 99999 899999999999999987653 121334589 8999999 9999999 9999999999999
Q ss_pred ecc
Q 016457 357 LSD 359 (389)
Q Consensus 357 ~~~ 359 (389)
++.
T Consensus 608 ~~~ 610 (611)
T 1nr0_A 608 NVP 610 (611)
T ss_dssp ECC
T ss_pred ecc
Confidence 973
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6e-49 Score=346.71 Aligned_cols=312 Identities=14% Similarity=0.175 Sum_probs=264.1
Q ss_pred eEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEE
Q 016457 22 SIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLH 98 (389)
Q Consensus 22 ~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~ 98 (389)
.+..|+.. .+.+++.+ .+.|++++|+|++++|++|+.|++|+|||+.+++....+..|...|.+++|+|++ ++|+
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g--~~la 124 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNG--QSVA 124 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTS--SEEE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCC--CEEE
Confidence 33445543 35567777 8999999999999999999999999999999999999999999999999999999 7999
Q ss_pred EEecCCeEEEEEccCCe-------EEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECcCCceeeeee----ecc
Q 016457 99 SCSSDGTIRAWDTRSFH-------EVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWRNKKQVACLE----ESH 166 (389)
Q Consensus 99 s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~ 166 (389)
+|+.|+.+++||+.+.. ....+.+|...|.++.|.|+++ .+++++.|+.|++||+++++.+..+. .+|
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h 204 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGH 204 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCC
Confidence 99999999999987532 3456778999999999998754 58888889999999999998887662 278
Q ss_pred cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 167 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
...|.+++|++.+.++|++|+.|+.|++||++.. ...+..+.+|...|.+++|+ +++.+|++++.|++|++||+++
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~---~~~~~~~~~h~~~v~~v~~~-p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRIT---SRAVRTYHGHEGDINSVKFF-PDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT---CCCCEEECCCSSCCCEEEEC-TTSSEEEEECSSSCEEEEETTT
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC---CcceEEECCcCCCeEEEEEe-cCCCeEEEEcCCCeEEEEECCC
Confidence 8999999998844469999999999999999832 24566778899999999999 7889999999999999999999
Q ss_pred CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEE---ecccceee
Q 016457 247 GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVL---VGGHTAVV 323 (389)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~---~~~h~~~v 323 (389)
++.+..+........ .+...+.+++|+|+|+ +|++|+.||.|++||+.+++. +..+ ..+|...|
T Consensus 281 ~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~g~--~l~~g~~dg~i~vwd~~~~~~------~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 281 GHQLQVYNREPDRND-----NELPIVTSVAFSISGR--LLFAGYSNGDCYVWDTLLAEM------VLNLGTLQNSHEGRI 347 (380)
T ss_dssp TEEEEEECCCCSSSC-----CSSCSCSEEEECSSSS--EEEEECTTSCEEEEETTTCCE------EEEECCSCSSCCCCC
T ss_pred CcEEEEecccccccc-----cccCceEEEEECCCCC--EEEEEECCCCEEEEECCCCce------EEEEecccCCCCCce
Confidence 998888765321110 1334588999999999 899999999999999987765 3333 24799999
Q ss_pred eeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 324 RSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 324 ~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.++ +|+|+|++|+||+.||+|++|++...
T Consensus 348 ~~l---------~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 348 SCL---------GLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CEE---------EECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EEE---------EECCCCCEEEEeeCCCCEEEEecCCC
Confidence 999 99999999999999999999998753
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.4e-47 Score=326.87 Aligned_cols=291 Identities=23% Similarity=0.410 Sum_probs=256.0
Q ss_pred eeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 32 IQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
..++.+ .+.|++++|+|++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++ ++|++++.|+.|++||
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCC--CEEEEECCCCEEEEEE
Confidence 345556 8899999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred ccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+.+++.+..+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+. .|..+|.+++|+|++. +|++++.|+
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~ 171 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGS-LIVSSSYDG 171 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCC-EEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999888 8999999999999995 999999999
Q ss_pred cEEEEecCCCCCCCccceee-eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCC
Q 016457 191 LICTFDTGGDINDDDLLESV-INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDV 269 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (389)
.|++||++++ ..+..+ ..+...+..++|+ +++++|++++.|+.|++||+.+++.+..+..+. ..
T Consensus 172 ~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~----------~~ 236 (312)
T 4ery_A 172 LCRIWDTASG----QCLKTLIDDDNPPVSFVKFS-PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHK----------NE 236 (312)
T ss_dssp CEEEEETTTC----CEEEEECCSSCCCEEEEEEC-TTSSEEEEEETTTEEEEEETTTTEEEEEECSSC----------CS
T ss_pred cEEEEECCCC----ceeeEEeccCCCceEEEEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecC----------Cc
Confidence 9999999854 233333 3455678999999 788999999999999999999999988887643 11
Q ss_pred Cceeeeccc-CCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEec
Q 016457 270 DYFVDCHYP-GEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGG 348 (389)
Q Consensus 270 ~~i~~~~~~-~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~ 348 (389)
.......++ +++. +|++|+.||.|++||+.+++. +..+. +|...|.++ +|+|++.+|++++
T Consensus 237 ~~~~~~~~~~~~~~--~l~sg~~dg~i~vwd~~~~~~------~~~~~-~h~~~v~~~---------~~~p~~~~l~s~~ 298 (312)
T 4ery_A 237 KYCIFANFSVTGGK--WIVSGSEDNLVYIWNLQTKEI------VQKLQ-GHTDVVIST---------ACHPTENIIASAA 298 (312)
T ss_dssp SSCCCEEEECSSSC--EEEECCTTSCEEEEETTTCCE------EEEEC-CCSSCEEEE---------EECSSSSEEEEEE
T ss_pred eEEEEEEEEeCCCc--EEEEECCCCEEEEEECCCchh------hhhhh-ccCCcEEEE---------eecCcCCceEEEE
Confidence 222233344 4566 889999999999999998776 56665 999999999 9999999999986
Q ss_pred --CCCeEEEEecc
Q 016457 349 --EDGRLCCWLSD 359 (389)
Q Consensus 349 --~dg~v~iW~~~ 359 (389)
.|+.|++|+.+
T Consensus 299 ~~~d~~i~~W~~d 311 (312)
T 4ery_A 299 LENDKTIKLWKSD 311 (312)
T ss_dssp CTTTCCEEEEECC
T ss_pred ccCCccEEEecCC
Confidence 69999999975
No 11
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.8e-48 Score=359.95 Aligned_cols=307 Identities=13% Similarity=0.164 Sum_probs=260.0
Q ss_pred CeEEEEecCceeeeeec-CcceEEEeecCCCC-eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEE
Q 016457 21 NSIKRFGLKNSIQTNFG-DDYVFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLH 98 (389)
Q Consensus 21 ~~i~~w~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~ 98 (389)
+.|++|+.++....+.+ ...|++++|+|++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++ ++|+
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg--~~la 206 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG--SLFA 206 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS--SEEE
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCC--CEEE
Confidence 58999998888888888 88999999999987 59999999999999999999999999999999999999999 7999
Q ss_pred EEecCCeEEEEEccCCeEEEEEE-------cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee--------
Q 016457 99 SCSSDGTIRAWDTRSFHEVWSVT-------AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE-------- 163 (389)
Q Consensus 99 s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-------- 163 (389)
+|+.|++|++||+.+++.+..+. +|...|.+++|+|++..|++++.|++|++||+++++.+.++.
T Consensus 207 s~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~ 286 (611)
T 1nr0_A 207 STGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQ 286 (611)
T ss_dssp EEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGC
T ss_pred EEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccce
Confidence 99999999999999999988884 689999999999999999999999999999998876543321
Q ss_pred ----------------------------------ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCc----
Q 016457 164 ----------------------------------ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD---- 205 (389)
Q Consensus 164 ----------------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---- 205 (389)
.+|...|++++|+|+++ +|++++.|+.|++||+.++.....
T Consensus 287 ~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 287 QLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp EEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred eEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCceeeecccC
Confidence 26889999999999996 999999999999999875421000
Q ss_pred ---cc-----------------------------------------------------------------------eeee
Q 016457 206 ---LL-----------------------------------------------------------------------ESVI 211 (389)
Q Consensus 206 ---~~-----------------------------------------------------------------------~~~~ 211 (389)
.+ ....
T Consensus 366 h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~ 445 (611)
T 1nr0_A 366 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 445 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE
T ss_pred CcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee
Confidence 00 0000
Q ss_pred ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCcee--EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe
Q 016457 212 NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNV--ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG 289 (389)
Q Consensus 212 ~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g 289 (389)
.+...+.+++|+ +++++|++++.|++|++||+.++... .. .. |...|.+++|+|+|+ +|+++
T Consensus 446 ~~~~~v~~va~s-pdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~------------h~~~v~~v~fspdg~--~las~ 509 (611)
T 1nr0_A 446 PISYNSSCVALS-NDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IV------------HPAEITSVAFSNNGA--FLVAT 509 (611)
T ss_dssp ECSSCEEEEEEC-TTSCEEEEEETTSEEEEEEEETTEEEEEEE-EE------------CSSCEEEEEECTTSS--EEEEE
T ss_pred ecCCCceEEEEe-CCCCEEEEeCCCCeEEEEEccCCceeeeec-cC------------CCCceEEEEECCCCC--EEEEE
Confidence 123456789999 78899999999999999999876432 22 22 779999999999999 89999
Q ss_pred cCCceEEEEEecc-CCccccCCCeEE-EecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 290 TGAGTVGYFPVNY-GGAATIGPPEAV-LVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 290 ~~dg~i~i~~~~~-~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+.|+.|++|++.+ ++. +.. +..+|...|.++ +|+|||++|+||+.|++|++|+++..
T Consensus 510 s~d~~v~~w~~~~~~~~------~~~~~~~~H~~~V~~v---------~fspdg~~lasgs~D~~v~lW~~~~~ 568 (611)
T 1nr0_A 510 DQSRKVIPYSVANNFEL------AHTNSWTFHTAKVACV---------SWSPDNVRLATGSLDNSVIVWNMNKP 568 (611)
T ss_dssp ETTSCEEEEEGGGTTEE------SCCCCCCCCSSCEEEE---------EECTTSSEEEEEETTSCEEEEETTCT
T ss_pred cCCCCEEEEEcCCCCce------eeeeeeeecccceeEE---------EECCCCCEEEEEECCCcEEEEECCCc
Confidence 9999999999987 433 121 233599999999 99999999999999999999999864
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.4e-47 Score=326.18 Aligned_cols=289 Identities=15% Similarity=0.221 Sum_probs=249.6
Q ss_pred eeeeec-CcceEEEeecCCC-CeEEEEecCCeEEEEeCCC-----ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCC
Q 016457 32 IQTNFG-DDYVFEIVPKNDW-SLMAVSLSTNVVKLYSPVT-----GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG 104 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg 104 (389)
..++.+ .+.|++++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|++ .+|++|+.|+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~s~D~ 87 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG--AYALSASWDK 87 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS--SEEEEEETTS
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC--CEEEEEeCCC
Confidence 345667 8999999999965 8999999999999999864 34567889999999999999999 7999999999
Q ss_pred eEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCC----
Q 016457 105 TIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQ---- 180 (389)
Q Consensus 105 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~---- 180 (389)
+|++||+.+++.+..+.+|...|.+++|+|++..+++++.|+.|++||++ ++.+..+. +|...|.++.|.|...
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~-~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL-GHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC-CCSSCEEEEEECCC------
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe-ccCCcEEEEEEccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999996 55667776 8999999999998531
Q ss_pred -CeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccccc
Q 016457 181 -NKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSL 259 (389)
Q Consensus 181 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 259 (389)
..+++++.|+.|++||+++. .....+.+|...|.+++|+ +++.+|++++.|+.|++||+.+++.+..+..
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~----~~~~~~~~h~~~v~~~~~s-p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~---- 236 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQF----QIEADFIGHNSNINTLTAS-PDGTLIASAGKDGEIMLWNLAAKKAMYTLSA---- 236 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTT----EEEEEECCCCSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEEC----
T ss_pred ccEEEEEeCCCEEEEEECCcc----hhheeecCCCCcEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCcEEEEecC----
Confidence 38999999999999999843 4556677899999999999 7889999999999999999999998888763
Q ss_pred ccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe-------cccceeeeeccCCCcc
Q 016457 260 ASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV-------GGHTAVVRSVLPMPSV 332 (389)
Q Consensus 260 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~ 332 (389)
...+.+++|+|++. +|++++.+ .+++|++..... +..+. ..|...+.++
T Consensus 237 ---------~~~v~~~~~sp~~~--~la~~~~~-~i~v~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~------ 292 (319)
T 3frx_A 237 ---------QDEVFSLAFSPNRY--WLAAATAT-GIKVFSLDPQYL------VDDLRPEFAGYSKAAEPHAVSL------ 292 (319)
T ss_dssp ---------CSCEEEEEECSSSS--EEEEEETT-EEEEEEETTEEE------EEEECCCCTTCCGGGCCCEEEE------
T ss_pred ---------CCcEEEEEEcCCCC--EEEEEcCC-CcEEEEeCcCee------eeccCccccccccCcCcceeEE------
Confidence 36799999999998 77877655 499999987543 22221 2345667777
Q ss_pred cCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 333 QGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 333 ~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|+|||++|++|+.||.|++|++.+
T Consensus 293 ---~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 293 ---AWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ---EECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ---EECCCCCEEEEeecCceEEEEEEee
Confidence 9999999999999999999999864
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-47 Score=333.08 Aligned_cols=302 Identities=16% Similarity=0.187 Sum_probs=248.7
Q ss_pred eeeeeec-Cc-ceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee---eecCCCCcEEEEEEeCCCCCCEEEEEecCCe
Q 016457 31 SIQTNFG-DD-YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG---ECKGHSSTVNQISFSGPSTPHVLHSCSSDGT 105 (389)
Q Consensus 31 ~~~~~~~-~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~---~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~ 105 (389)
.+.++.+ .+ .|.+++|+|++++||+|+.|++|+|||+.+++... ...+|...|.+++|+|++ ++|++|+.|++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g--~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG--NYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS--SEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC--CEEEEEECCCc
Confidence 4456666 44 89999999999999999999999999998775432 236899999999999999 79999999999
Q ss_pred EEEEEccCC--eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc---eeeeeeecccCCeeEEEEecCCC
Q 016457 106 IRAWDTRSF--HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK---QVACLEESHVEDVTQVHFVPNNQ 180 (389)
Q Consensus 106 i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~ 180 (389)
|++|++..+ +.+..+.+|...|.+++|+|++..|++++.|+.|++||++++. .+..+. +|...|.+++|+|++.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEECCCCC
Confidence 999998876 4677889999999999999999999999999999999998764 345565 8999999999999996
Q ss_pred CeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCc------------
Q 016457 181 NKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQ------------ 248 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------------ 248 (389)
+|++++.|+.|++||.+++. ......+.+|...|.+++|+ +++++|++++.|++|++|+.....
T Consensus 164 -~l~s~s~d~~i~~w~~~~~~--~~~~~~~~~h~~~v~~l~~s-p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 164 -LLASASYDDTVKLYREEEDD--WVCCATLEGHESTVWSLAFD-PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp -CEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred -EEEEEeCCCcEEEEEecCCC--EEEEEEecCCCCceEEEEEC-CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 99999999999999998431 12345677899999999999 788999999999999999964321
Q ss_pred ---eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCC--CeEEEecccceee
Q 016457 249 ---NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGP--PEAVLVGGHTAVV 323 (389)
Q Consensus 249 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~--~~~~~~~~h~~~v 323 (389)
++..+.+ .|...|.+++|+|++. +|++++.|+.|++|+........... .......+|...|
T Consensus 240 ~~~~~~~~~~-----------~h~~~v~~v~~~~~~~--~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V 306 (345)
T 3fm0_A 240 SWKCICTLSG-----------FHSRTIYDIAWCQLTG--ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDV 306 (345)
T ss_dssp EEEEEEEECS-----------SCSSCEEEEEECTTTC--CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCE
T ss_pred ccceeEEecC-----------CCCCcEEEEEEecCCC--EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcE
Confidence 1222222 1678999999999998 78999999999999998654211100 1122234899999
Q ss_pred eeccCCCcccCCCCCCCce-eEEEecCCCeEEEEeccCC
Q 016457 324 RSVLPMPSVQGRPAQSHGI-FGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 324 ~~~~~~~~~~~~~~s~~~~-~l~s~~~dg~v~iW~~~~~ 361 (389)
+++ +|+|++. +|+||+.||+|++|++...
T Consensus 307 ~~v---------~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 307 NCV---------AWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEE---------EECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred eEe---------EEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 999 9999984 8999999999999998765
No 14
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-46 Score=348.61 Aligned_cols=301 Identities=22% Similarity=0.336 Sum_probs=269.9
Q ss_pred CCccccCCCCeEEEEecC-ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 12 PKSQSCDNVNSIKRFGLK-NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
...++++.++.|++|+.. +.+..+.+ ...|.+++|+|+++.|++++.|+.|++||.. ++.+..+.+|...|.+++|+
T Consensus 275 ~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 275 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFS 353 (577)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEEC
Confidence 356778899999999986 45566666 8899999999999999999999999999976 45567788899999999999
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
|++ ++|++++.|+.|++||. +++.+..+..|...|.+++|+|++..+++++.|+.|++||. +++.+..+. +|...
T Consensus 354 ~~g--~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~-~~~~~ 428 (577)
T 2ymu_A 354 PDG--QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSS 428 (577)
T ss_dssp TTS--SEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE-CCSSC
T ss_pred CCC--CEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec-CCCCC
Confidence 999 79999999999999995 57888899999999999999999999999999999999995 577788887 89999
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
|++++|+|++. +|++++.|+.|++||... ..+..+..|...|.+++|+ +++++|++++.|+.|++||. +++.
T Consensus 429 v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~-----~~~~~~~~~~~~v~~~~~s-pd~~~las~~~d~~i~iw~~-~~~~ 500 (577)
T 2ymu_A 429 VWGVAFSPDDQ-TIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-NGQL 500 (577)
T ss_dssp EEEEEECTTSS-EEEEEETTSEEEEEETTS-----CEEEEEECCSSCEEEEEEC-TTSCEEEEEETTSEEEEEET-TSCE
T ss_pred eEEEEECCCCC-EEEEEcCCCEEEEEECCC-----CEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCEEEEEcC-CCCE
Confidence 99999999996 999999999999999763 4567778899999999999 78899999999999999995 6788
Q ss_pred eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCC
Q 016457 250 VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPM 329 (389)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 329 (389)
+..+.+ |...|.+++|+|+++ +|++++.||.|++||.. ++. +..+. +|...|.++
T Consensus 501 ~~~~~~------------h~~~v~~l~~s~dg~--~l~s~~~dg~v~lwd~~-~~~------~~~~~-~h~~~v~~~--- 555 (577)
T 2ymu_A 501 LQTLTG------------HSSSVRGVAFSPDGQ--TIASASDDKTVKLWNRN-GQL------LQTLT-GHSSSVWGV--- 555 (577)
T ss_dssp EEEEEC------------CSSCEEEEEECTTSS--CEEEEETTSEEEEECTT-SCE------EEEEE-CCSSCEEEE---
T ss_pred EEEEeC------------CCCCEEEEEEcCCCC--EEEEEECcCEEEEEeCC-CCE------EEEEc-CCCCCEEEE---
Confidence 888876 779999999999999 88999999999999964 333 57776 999999999
Q ss_pred CcccCCCCCCCceeEEEecCCCeEEEEe
Q 016457 330 PSVQGRPAQSHGIFGWTGGEDGRLCCWL 357 (389)
Q Consensus 330 ~~~~~~~~s~~~~~l~s~~~dg~v~iW~ 357 (389)
+|+|||++|+|++.||+|++||
T Consensus 556 ------~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 556 ------AFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ------EECTTSSCEEEEETTSCEEEEC
T ss_pred ------EEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999999999999997
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-46 Score=331.97 Aligned_cols=291 Identities=19% Similarity=0.282 Sum_probs=246.1
Q ss_pred eecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCC------------------cEEEEEEeCCCCCCE
Q 016457 35 NFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSS------------------TVNQISFSGPSTPHV 96 (389)
Q Consensus 35 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~------------------~v~~i~~~~~~~~~~ 96 (389)
+.+.+.|.+++|+|+|++||+|+ ++.+++|++.+++.+..+..|.. .|.+++|+|++ ++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg--~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG--KF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS--SE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC--CE
Confidence 33488999999999999999987 68999999999988877765532 49999999999 79
Q ss_pred EEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEe
Q 016457 97 LHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFV 176 (389)
Q Consensus 97 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 176 (389)
|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++..+++++.|+.|++||+++++....+. +...+.+++|+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~~ 215 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS--IEDGVTTVAVS 215 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE--cCCCcEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999998888776 67789999999
Q ss_pred c-CCCCeEEEEeCCCcEEEEecCCCCCCCccceee-------eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCc
Q 016457 177 P-NNQNKVVSASVDGLICTFDTGGDINDDDLLESV-------INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQ 248 (389)
Q Consensus 177 ~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 248 (389)
| ++ .+|++|+.|+.|++||++++. .+..+ .+|...|.+++|+ +++.+|++++.|+.|++||+.+..
T Consensus 216 ~~~~-~~l~~~s~d~~v~iwd~~~~~----~~~~~~~~~~~~~~h~~~v~~v~~~-~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 216 PGDG-KYIAAGSLDRAVRVWDSETGF----LVERLDSENESGTGHKDSVYSVVFT-RDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp STTC-CEEEEEETTSCEEEEETTTCC----EEEEEC------CCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEEC----
T ss_pred CCCC-CEEEEEcCCCcEEEEECCCCc----EEEeecccccCCCCCCCCEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCC
Confidence 9 66 599999999999999998653 22222 4688899999999 788999999999999999997643
Q ss_pred e------------eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe
Q 016457 249 N------------VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV 316 (389)
Q Consensus 249 ~------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~ 316 (389)
. ...+.+ |...|.+++|+|++. +|++|+.||.|++||+.+++. +..+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~------------h~~~v~~~~~~~~~~--~l~sgs~D~~v~iwd~~~~~~------~~~l~ 349 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIG------------HKDFVLSVATTQNDE--YILSGSKDRGVLFWDKKSGNP------LLMLQ 349 (393)
T ss_dssp -----------CEEEEEEC------------CSSCEEEEEECGGGC--EEEEEETTSEEEEEETTTCCE------EEEEE
T ss_pred CcccccCCCCCcceEEEec------------ccCcEEEEEECCCCC--EEEEEeCCCeEEEEECCCCeE------EEEEC
Confidence 2 333333 778999999999998 899999999999999998776 56665
Q ss_pred cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 317 GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 317 ~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|...|.++..... ..|+|++.+|+||+.||+|++|++..
T Consensus 350 -~h~~~v~~v~~~~~---~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 350 -GHRNSVISVAVANG---SSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp -CCSSCEEEEEECSS---CTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -CCCCCEEEEEecCC---cCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999931111 13567899999999999999999864
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-46 Score=323.63 Aligned_cols=295 Identities=15% Similarity=0.188 Sum_probs=235.1
Q ss_pred eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc--eeeeee-cC-CCCcEEEEEEeCCCCCCEEEEEecCCe
Q 016457 31 SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG--QYSGEC-KG-HSSTVNQISFSGPSTPHVLHSCSSDGT 105 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~-~~~~v~~i~~~~~~~~~~l~s~~~dg~ 105 (389)
.+..+.+ .+.|++++|+|+ +||+|+.|++|++||+.++ +....+ .+ |...|.+++|+|++ .+|++|+.|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~las~s~D~~ 81 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT--SLLAAGSFDST 81 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTS--SEEEEEETTSC
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCC--CEEEEEeCCCc
Confidence 4566777 889999999998 9999999999999999875 445555 44 99999999999998 79999999999
Q ss_pred EEEEEccC-------CeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCC----ceeeeeeecccCCeeEEE
Q 016457 106 IRAWDTRS-------FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK----KQVACLEESHVEDVTQVH 174 (389)
Q Consensus 106 i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~v~~~~ 174 (389)
|++||+.. .+.+..+.+|...|.+++|+|++.+|++++.|+.|++||++.. +.+..+. +|...|.+++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~ 160 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVI 160 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEE
Confidence 99999853 4567788999999999999999999999999999999999532 4556676 8999999999
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC-CcEEEEEecCCcEEEEEcCCC------
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET-NKHLWCLTHIETLSIWDWKDG------ 247 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~------ 247 (389)
|+|++. +|++++.|+.|++||.+++ ....+..+.+|...|.+++|+|.. +.+|++++.|++|++||+..+
T Consensus 161 ~~p~~~-~l~s~s~D~~i~iW~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 161 WHPSEA-LLASSSYDDTVRIWKDYDD--DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp ECSSSS-EEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCCC--CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 999995 9999999999999998743 123566777899999999999432 568999999999999998654
Q ss_pred --ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccce-eee
Q 016457 248 --QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTA-VVR 324 (389)
Q Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~-~v~ 324 (389)
.+...+.. .|...|.+++|++++ +|++++.||.|++|+..+++. ..+.....+|.. .|.
T Consensus 238 ~~~~~~~~~~-----------~h~~~v~~v~~s~~~---~l~s~~~dg~v~iw~~~~~~~----~~~~~~~~~h~~~~v~ 299 (330)
T 2hes_X 238 EWVCEAILPD-----------VHKRQVYNVAWGFNG---LIASVGADGVLAVYEEVDGEW----KVFAKRALCHGVYEIN 299 (330)
T ss_dssp EEEEEEECCS-----------CCSSCEEEEEECTTS---CEEEEETTSCEEEEEEETTEE----EEEEEESCTTTTSCEE
T ss_pred eeEEeeeccc-----------ccccceEEEEEcCCC---EEEEEeCCCEEEEEEcCCCce----EEEeccccccccceEE
Confidence 22222222 167899999999754 678999999999999987632 012233347876 899
Q ss_pred eccCCCcccCCCCCC--CceeEEEecCCCeEEEEeccC
Q 016457 325 SVLPMPSVQGRPAQS--HGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 325 ~~~~~~~~~~~~~s~--~~~~l~s~~~dg~v~iW~~~~ 360 (389)
++ +|+| ++++|+||+.||+|++|+++.
T Consensus 300 ~v---------~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 300 VV---------KWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EE---------EEC-----CCEEEEETTSEEEEEEC--
T ss_pred EE---------EEecCCCceEEEEecCCCcEEEEEecc
Confidence 99 9999 789999999999999999864
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.7e-45 Score=320.28 Aligned_cols=294 Identities=19% Similarity=0.254 Sum_probs=244.0
Q ss_pred eeeeeec-CcceEEEee-----cC-CCCeEEEEecCCeEEEEeCCC-------ceeeeeecCCCCcEEEEEEeCCCCCCE
Q 016457 31 SIQTNFG-DDYVFEIVP-----KN-DWSLMAVSLSTNVVKLYSPVT-------GQYSGECKGHSSTVNQISFSGPSTPHV 96 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~~~ 96 (389)
....+.+ .+.|++++| ++ ++++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++ .+
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~--~~ 90 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN--CF 90 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST--TE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC--CE
Confidence 4456777 889999999 76 899999999999999999864 34567788999999999999998 79
Q ss_pred EEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeee-eecccCCeeEEEE
Q 016457 97 LHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACL-EESHVEDVTQVHF 175 (389)
Q Consensus 97 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~ 175 (389)
+++|+.|++|++||+++++.+..+.+|...|.+++|+|++..+++++.|+.|++||+......... ...|...|.+++|
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 999999999999999999999999999999999999999999999999999999999843322221 1258889999999
Q ss_pred ecCCC---------CeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 176 VPNNQ---------NKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 176 ~~~~~---------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
+|++. .+|++++.|+.|++||... .....+..|...|.+++|+ +++++|++++.|+.|++||+..
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~h~~~v~~~~~s-~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-----QIRYTFKAHESNVNHLSIS-PNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-----EEEEEEECCSSCEEEEEEC-TTSSEEEEEETTCEEEEEESSC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcCCC-----ceeEEEcCccccceEEEEC-CCCCEEEEEcCCCeEEEEECCC
Confidence 99862 3899999999999999542 3455677899999999999 7889999999999999999944
Q ss_pred -CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe---------
Q 016457 247 -GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV--------- 316 (389)
Q Consensus 247 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--------- 316 (389)
......+. +...|.+++|+|++. ++++| .|+.|++|++.+++... +..+.
T Consensus 245 ~~~~~~~~~-------------~~~~v~~v~~sp~~~--~la~~-~d~~v~iw~~~~~~~~~----~~~~~~~~~~~~~~ 304 (343)
T 2xzm_R 245 LTYPQREFD-------------AGSTINQIAFNPKLQ--WVAVG-TDQGVKIFNLMTQSKAP----VCTIEAEPITKAEG 304 (343)
T ss_dssp CSSCSEEEE-------------CSSCEEEEEECSSSC--EEEEE-ESSCEEEEESSSCCSCS----EEECCCCSGGGBTT
T ss_pred Ccccceeec-------------CCCcEEEEEECCCCC--EEEEE-CCCCEEEEEeCCCCCCc----eEEeecCcchhhhh
Confidence 34444443 335699999999987 66655 67889999998765411 11111
Q ss_pred -cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 317 -GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 317 -~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.+|...|.++ +|+|+|++|++|+.||.|++|+++.+
T Consensus 305 ~~~~~~~v~~~---------~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 305 QKGKNPQCTSL---------AWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp BCCSCCCEEEE---------EECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hcCCCCceEEE---------EECCCCCeEEEecCCceEEEEEEEcc
Confidence 2677888888 99999999999999999999998643
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=317.96 Aligned_cols=267 Identities=17% Similarity=0.244 Sum_probs=246.3
Q ss_pred CCccccCCCCeEEEEecCc----eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEE
Q 016457 12 PKSQSCDNVNSIKRFGLKN----SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQI 86 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i 86 (389)
...++++.|++|++|+... ....+.+ ...|.+++|++++.++++++.|++|++||+.+++.+..+..|...+.++
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~ 128 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTL 128 (321)
T ss_dssp CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCE
T ss_pred CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEE
Confidence 3578999999999999853 2334566 8899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecc
Q 016457 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166 (389)
Q Consensus 87 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (389)
+|+|++ ++|++|+.||.|++|++++++....+..+...|.+++|+|++..+++++.|+.|++||+++++.+..+. +|
T Consensus 129 ~~spdg--~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h 205 (321)
T 3ow8_A 129 AFSPDS--QYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GH 205 (321)
T ss_dssp EECTTS--SEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CC
T ss_pred EECCCC--CEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-cc
Confidence 999999 799999999999999999999999999999999999999999999999999999999999999999998 89
Q ss_pred cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 167 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
..+|++++|+|+++ +|++++.|+.|++||++++ .....+.+|...|.+++|+ +++.+|++++.|++|++||+.+
T Consensus 206 ~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~s-p~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFC-PDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp SSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC----CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTT
T ss_pred CCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc----ceeEEEcCCCCceEEEEEC-CCCCEEEEEeCCCcEEEEeCCC
Confidence 99999999999996 9999999999999999854 4566777899999999999 7888999999999999999999
Q ss_pred CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 247 GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++++..+.+ |...|.+++|+|+++ +|++++.||.|++||..
T Consensus 280 ~~~~~~~~~------------h~~~v~~v~~s~~g~--~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 280 RTCVHTFFD------------HQDQVWGVKYNGNGS--KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TEEEEEECC------------CSSCEEEEEECTTSS--EEEEEETTCCEEEEECC
T ss_pred CEEEEEEcC------------CCCcEEEEEECCCCC--EEEEEeCCCeEEEEeCC
Confidence 999999886 669999999999999 88999999999999963
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.3e-46 Score=330.48 Aligned_cols=267 Identities=19% Similarity=0.235 Sum_probs=246.3
Q ss_pred CCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEE
Q 016457 12 PKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~ 88 (389)
+..++++.|++|++||+. +...++.+ .+.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~ 200 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSI 200 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEE
Confidence 346788999999999985 46677777 889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccC
Q 016457 89 SGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168 (389)
Q Consensus 89 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (389)
+|++ ++|++|+.|++|++||++++.++..+.+|...|.++.++|++..+++++.|+.|++||+++++....+. +|..
T Consensus 201 ~p~~--~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~ 277 (410)
T 1vyh_C 201 MPNG--DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRH 277 (410)
T ss_dssp CSSS--SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSS
T ss_pred eCCC--CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCc
Confidence 9998 799999999999999999999999999999999999999999999999999999999999999999888 8999
Q ss_pred CeeEEEEecC--------------------CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCc
Q 016457 169 DVTQVHFVPN--------------------NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNK 228 (389)
Q Consensus 169 ~v~~~~~~~~--------------------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 228 (389)
.|.+++|+|+ + .+|++|+.|+.|++||++++ ..+..+.+|...|.+++|+ +++.
T Consensus 278 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h~~~v~~v~~~-~~g~ 351 (410)
T 1vyh_C 278 VVECISWAPESSYSSISEATGSETKKSGKPG-PFLLSGSRDKTIKMWDVSTG----MCLMTLVGHDNWVRGVLFH-SGGK 351 (410)
T ss_dssp CEEEEEECCSCGGGGGGGCCSCC-------C-CEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEC-SSSS
T ss_pred eEEEEEEcCcccccchhhhccccccccCCCC-CEEEEEeCCCeEEEEECCCC----ceEEEEECCCCcEEEEEEc-CCCC
Confidence 9999999996 4 38999999999999999954 4667778899999999999 7888
Q ss_pred EEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 229 HLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 229 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
+|++++.|+.|++||+.+++++..+.. |...|.+++|+|++. +|++|+.||.|++|+++
T Consensus 352 ~l~s~s~D~~i~vwd~~~~~~~~~~~~------------h~~~v~~l~~~~~~~--~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 352 FILSCADDKTLRVWDYKNKRCMKTLNA------------HEHFVTSLDFHKTAP--YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEETTTEEEEECCTTSCCCEEEEC------------CSSCEEEEEECSSSS--CEEEEETTSEEEEEC--
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcC------------CCCcEEEEEEcCCCC--EEEEEeCCCcEEEEeCC
Confidence 999999999999999999999998886 779999999999999 88999999999999863
No 20
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-47 Score=338.77 Aligned_cols=323 Identities=14% Similarity=0.174 Sum_probs=260.3
Q ss_pred CCCCeEEEEecCc-----eeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCC----ceeeeeecCCCCcEEEEEE
Q 016457 18 DNVNSIKRFGLKN-----SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT----GQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 18 ~~~~~i~~w~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~i~~ 88 (389)
+.|+.|++|++.. .+..+.+...|++++|+|++++|++|+.||.|++||+.+ .+.+..+.+|...|.+++|
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF 121 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE
Confidence 8899999999863 333344478999999999999999999999999999987 3578888999999999999
Q ss_pred eCC-CCCCEEEEEecCCeEEEEEccCCe------EEEE---EEcCCCCeEEEEEeCC-CCeEEEeecCCeEEEEECcCCc
Q 016457 89 SGP-STPHVLHSCSSDGTIRAWDTRSFH------EVWS---VTAGSQEIFCFSFGGS-TDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 89 ~~~-~~~~~l~s~~~dg~i~iwd~~~~~------~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
+|+ + .+|++++.|+.|++||+.+++ .... +..|...|.+++|+|+ +..+++++.|+.|++||+++++
T Consensus 122 ~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 199 (416)
T 2pm9_A 122 NAKQD--NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK 199 (416)
T ss_dssp CSSST--TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE
T ss_pred cCCCC--CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC
Confidence 998 5 799999999999999999876 3322 3567889999999998 5677888889999999999999
Q ss_pred eeeeeeecc------cCCeeEEEEecCCCCeEEEEeCCC---cEEEEecCCCCCCCccceeee-ccCCceeeEEEecCCC
Q 016457 158 QVACLEESH------VEDVTQVHFVPNNQNKVVSASVDG---LICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFGETN 227 (389)
Q Consensus 158 ~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 227 (389)
.+..+. .+ ...|.+++|+|++..++++++.|+ .|++||+++.. .....+. .|...|.+++|+|.++
T Consensus 200 ~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~---~~~~~~~~~~~~~v~~~~~s~~~~ 275 (416)
T 2pm9_A 200 EVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN---TPLQTLNQGHQKGILSLDWCHQDE 275 (416)
T ss_dssp EEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT---SCSBCCCSCCSSCEEEEEECSSCS
T ss_pred cceEEe-ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC---CCcEEeecCccCceeEEEeCCCCC
Confidence 888887 44 788999999999866999999998 99999999542 3445555 7889999999995488
Q ss_pred cEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCC-CeEEEEEecCCceEEEEEeccCCcc
Q 016457 228 KHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEG-ENLWVIGGTGAGTVGYFPVNYGGAA 306 (389)
Q Consensus 228 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~l~~g~~dg~i~i~~~~~~~~~ 306 (389)
.+|++++.|+.|++||+.+++.+..+.. |...+.+++|+|++ . +|++++.||.|++|++.+....
T Consensus 276 ~~l~s~~~dg~v~~wd~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~--~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 276 HLLLSSGRDNTVLLWNPESAEQLSQFPA------------RGNWCFKTKFAPEAPD--LFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SCEEEEESSSEEEEECSSSCCEEEEEEC------------SSSCCCCEEECTTCTT--EEEECCSSSEEEEEESCCCCCS
T ss_pred CeEEEEeCCCCEEEeeCCCCccceeecC------------CCCceEEEEECCCCCC--EEEEEecCCcEEEEEccCCCCC
Confidence 9999999999999999999999998886 66899999999998 6 7899999999999999877642
Q ss_pred ccCCC--------eEEEe--cc---cceeeeec------cCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 307 TIGPP--------EAVLV--GG---HTAVVRSV------LPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 307 ~~~~~--------~~~~~--~~---h~~~v~~~------~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
..... ...+. .+ |...+..+ +.......++|+|+|++|++++.||.|+||++..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 11000 00000 00 11111111 0011122349999999999999999999999875
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.2e-44 Score=334.29 Aligned_cols=304 Identities=22% Similarity=0.353 Sum_probs=270.2
Q ss_pred CCccccCCCCeEEEEecC-ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 12 PKSQSCDNVNSIKRFGLK-NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
...++++.|+.|++|+.. +.+..+.+ ...|.+++|+|+++.|++++.|+.|++|+.. ++.+..+.+|...|.+++|+
T Consensus 234 ~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~ 312 (577)
T 2ymu_A 234 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFS 312 (577)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEEC
Confidence 356788899999999976 45666666 8899999999999999999999999999964 67788899999999999999
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
|++ .+|++++.|++|++||.. +..+..+..|...|.+++|+|++..+++++.|+.|++||. +++.+..+. +|...
T Consensus 313 ~~~--~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~-~~~~~ 387 (577)
T 2ymu_A 313 PDG--QTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSS 387 (577)
T ss_dssp TTS--SEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEE-CCSSC
T ss_pred CCC--CEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEec-CCCCC
Confidence 999 799999999999999976 4566778889999999999999999999999999999995 577788887 89999
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
|++++|+|+++ +|++++.|+.|++||... ..+..+..|...|.+++|+ +++++|++++.|+.|++||. +++.
T Consensus 388 v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~-----~~~~~~~~~~~~v~~~~~s-~d~~~l~~~~~d~~v~~w~~-~~~~ 459 (577)
T 2ymu_A 388 VRGVAFSPDGQ-TIASASDDKTVKLWNRNG-----QLLQTLTGHSSSVWGVAFS-PDDQTIASASDDKTVKLWNR-NGQL 459 (577)
T ss_dssp EEEEEECTTSS-CEEEEETTSEEEEECTTC-----CEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEET-TSCE
T ss_pred eEEEEECCCCC-EEEEEeCCCEEEEEeCCC-----CEEEEecCCCCCeEEEEEC-CCCCEEEEEcCCCEEEEEEC-CCCE
Confidence 99999999996 999999999999999652 3466778899999999999 78889999999999999996 5677
Q ss_pred eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCC
Q 016457 250 VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPM 329 (389)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 329 (389)
+..+.. |...+.+++|+|+++ +|++++.|+.|++|+.. ++. +..+. +|...|+++
T Consensus 460 ~~~~~~------------~~~~v~~~~~spd~~--~las~~~d~~i~iw~~~-~~~------~~~~~-~h~~~v~~l--- 514 (577)
T 2ymu_A 460 LQTLTG------------HSSSVRGVAFSPDGQ--TIASASDDKTVKLWNRN-GQL------LQTLT-GHSSSVRGV--- 514 (577)
T ss_dssp EEEEEC------------CSSCEEEEEECTTSC--EEEEEETTSEEEEEETT-SCE------EEEEE-CCSSCEEEE---
T ss_pred EEEEcC------------CCCCEEEEEEcCCCC--EEEEEeCCCEEEEEcCC-CCE------EEEEe-CCCCCEEEE---
Confidence 777776 669999999999999 89999999999999964 333 56776 999999999
Q ss_pred CcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 330 PSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 330 ~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|+|+|++|++++.||.|++|+...
T Consensus 515 ------~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 515 ------AFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp ------EECTTSSCEEEEETTSEEEEECTTS
T ss_pred ------EEcCCCCEEEEEECcCEEEEEeCCC
Confidence 9999999999999999999999754
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-44 Score=323.56 Aligned_cols=311 Identities=11% Similarity=0.066 Sum_probs=267.7
Q ss_pred CccccCCCCeEEEEec----Cce--------eeeeec-----------CcceEEEeecCCCCeEEEEecCCeEEEEeCCC
Q 016457 13 KSQSCDNVNSIKRFGL----KNS--------IQTNFG-----------DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT 69 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~----~~~--------~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~ 69 (389)
..++++.|+.|++|++ ... ...+.. .+.|++++|+|++++|++|+.||.|++|| .+
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~ 138 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KT 138 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TT
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CC
Confidence 5788999999999999 532 222322 34899999999999999999999999999 66
Q ss_pred ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCC---------------eEEEEEeC
Q 016457 70 GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQE---------------IFCFSFGG 134 (389)
Q Consensus 70 ~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------v~~~~~~~ 134 (389)
++.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+..+..+... +.+++|+|
T Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (425)
T 1r5m_A 139 GALLNVLNFHRAPIVSVKWNKDG--THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD 216 (425)
T ss_dssp SCEEEEECCCCSCEEEEEECTTS--SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE
T ss_pred CCeeeeccCCCccEEEEEECCCC--CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC
Confidence 88888999999999999999998 79999999999999999999999999887666 99999996
Q ss_pred CCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccC
Q 016457 135 STDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVG 214 (389)
Q Consensus 135 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 214 (389)
+ +.+++++.++.|++||+++++.+..+. .|...|.+++|+|++. +|++++.|+.|++||++++ ..+..+..|.
T Consensus 217 ~-~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~ 289 (425)
T 1r5m_A 217 D-DKFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG----NSQNCFYGHS 289 (425)
T ss_dssp T-TEEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB----SCSEEECCCS
T ss_pred C-CEEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC----ccceEecCCC
Confidence 4 678899999999999999999888887 8999999999999996 9999999999999999854 4566667789
Q ss_pred CceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCce
Q 016457 215 TSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGT 294 (389)
Q Consensus 215 ~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~ 294 (389)
..|.+++|+ +++ ++++++.|+.|++||+.+++.+..+.. |...+.+++|+|+++ +|++++.||.
T Consensus 290 ~~i~~~~~~-~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~s~~~~--~l~~~~~dg~ 353 (425)
T 1r5m_A 290 QSIVSASWV-GDD-KVISCSMDGSVRLWSLKQNTLLALSIV------------DGVPIFAGRISQDGQ--KYAVAFMDGQ 353 (425)
T ss_dssp SCEEEEEEE-TTT-EEEEEETTSEEEEEETTTTEEEEEEEC------------TTCCEEEEEECTTSS--EEEEEETTSC
T ss_pred ccEEEEEEC-CCC-EEEEEeCCCcEEEEECCCCcEeEeccc------------CCccEEEEEEcCCCC--EEEEEECCCe
Confidence 999999999 566 999999999999999999998888876 668999999999999 8899999999
Q ss_pred EEEEEeccCCccc--------------cCCCeEEEecccce--eeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEec
Q 016457 295 VGYFPVNYGGAAT--------------IGPPEAVLVGGHTA--VVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLS 358 (389)
Q Consensus 295 i~i~~~~~~~~~~--------------~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~ 358 (389)
|++|++.+++... ...++..+. +|.. .|.++ +|+|++++|++++.||.|++|++
T Consensus 354 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~---------~~s~~~~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 354 VNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ-SSQDNDYIFDL---------SWNCAGNKISVAYSLQEGSVVAI 423 (425)
T ss_dssp EEEEECHHHHC--------------CEECCEEEEEC-CTTCCCCEEEE---------EECTTSSEEEEEESSSCCEEEEC
T ss_pred EEEEECCCCccceeeeecccccccCcccchhhhhhc-CcccCCceEEE---------EccCCCceEEEEecCceEEEEee
Confidence 9999998766100 001245554 7765 89999 99999999999999999999998
Q ss_pred c
Q 016457 359 D 359 (389)
Q Consensus 359 ~ 359 (389)
+
T Consensus 424 ~ 424 (425)
T 1r5m_A 424 P 424 (425)
T ss_dssp C
T ss_pred c
Confidence 6
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.7e-44 Score=310.47 Aligned_cols=299 Identities=15% Similarity=0.192 Sum_probs=251.2
Q ss_pred eeeeeec-CcceEEEeecCC-CCeEEEEecCCeEEEEeCCCc-----eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC
Q 016457 31 SIQTNFG-DDYVFEIVPKND-WSLMAVSLSTNVVKLYSPVTG-----QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD 103 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d 103 (389)
...+++| .+.|++++|+|+ +++|++|+.|++|+|||+.++ .+...+.+|...|.+++|+|++ .+|++++.|
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg--~~l~s~~~d 107 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG--QFALSGSWD 107 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS--SEEEEEETT
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC--CEEEEEccc
Confidence 3446778 899999999998 589999999999999998764 3566788999999999999999 799999999
Q ss_pred CeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCC-Ce
Q 016457 104 GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQ-NK 182 (389)
Q Consensus 104 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~ 182 (389)
+.|++|+............+...+..+.+++.+..+++++.|+.+++||+...........+|...+.+++|++++. .+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 99999999999999999988899999999999999999999999999999876554443347899999999998753 36
Q ss_pred EEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccC
Q 016457 183 VVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASD 262 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 262 (389)
+++++.|+.|++||++++ .....+..|...|.+++|+ +++++|++++.|+.|++||+.+.+.+..+..
T Consensus 188 ~~s~~~d~~i~i~d~~~~----~~~~~~~~h~~~v~~~~~s-~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~------- 255 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANC----KLKTNHIGHTGYLNTVTVS-PDGSLCASGGKDGQAMLWDLNEGKHLYTLDG------- 255 (340)
T ss_dssp EEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEC-TTSSEEEEEETTCEEEEEETTTTEEEEEEEC-------
T ss_pred EEEEcCCCEEEEEECCCC----ceeeEecCCCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEeccCceeeeecC-------
Confidence 789999999999999954 4566777899999999999 7889999999999999999999998888763
Q ss_pred CccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccc--cCCCeEEEecccceeeeeccCCCcccCCCCCCC
Q 016457 263 SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAAT--IGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSH 340 (389)
Q Consensus 263 ~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 340 (389)
...+..+.|+|++. +++++.|+.|++||+.++.... ..........+|...|+++ +|+|+
T Consensus 256 ------~~~v~~~~~~~~~~---~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l---------~~s~d 317 (340)
T 4aow_A 256 ------GDIINALCFSPNRY---WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSL---------AWSAD 317 (340)
T ss_dssp ------SSCEEEEEECSSSS---EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEE---------EECTT
T ss_pred ------CceEEeeecCCCCc---eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEE---------EECCC
Confidence 36799999999875 4566689999999998765410 0011111223688889999 99999
Q ss_pred ceeEEEecCCCeEEEEeccCC
Q 016457 341 GIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 341 ~~~l~s~~~dg~v~iW~~~~~ 361 (389)
|++|++|+.||.|+||++..+
T Consensus 318 g~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 318 GQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SSEEEEEETTSCEEEEEEEC-
T ss_pred CCEEEEEeCCCEEEEEeCCCc
Confidence 999999999999999999864
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.6e-44 Score=310.24 Aligned_cols=265 Identities=17% Similarity=0.224 Sum_probs=236.6
Q ss_pred CCCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc----eeeeeecCCCCcE
Q 016457 11 QPKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG----QYSGECKGHSSTV 83 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v 83 (389)
....++++.|++|++||.. +.+..+.. ...|.+++|+|++++|++|+.|+.|++|++.++ +....+.+|...|
T Consensus 67 ~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v 146 (340)
T 1got_B 67 SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYL 146 (340)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCE
T ss_pred CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccE
Confidence 3457889999999999975 45666666 888999999999999999999999999999865 3556778999999
Q ss_pred EEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee
Q 016457 84 NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE 163 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 163 (389)
.++.|++++ .+++++.|++|++||+.+++.+..+.+|...|.+++|+|++..+++++.|+.|++||++++..+..+.
T Consensus 147 ~~~~~~~~~---~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 147 SCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp EEEEEEETT---EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred EEEEECCCC---cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 999999887 69999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee--ccCCceeeEEEecCCCcEEEEEecCCcEEE
Q 016457 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI--NVGTSVGKVGFFGETNKHLWCLTHIETLSI 241 (389)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i 241 (389)
+|...|++++|+|++. .|++|+.|+.|++||++++. .+..+. .+...|.+++|+ +++.+|++++.|+.|++
T Consensus 224 -~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~----~~~~~~~~~~~~~v~~~~~s-~~g~~l~~g~~d~~i~v 296 (340)
T 1got_B 224 -GHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQ----ELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp -CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE----EEEEECCTTCCSCEEEEEEC-TTSSEEEEEETTSEEEE
T ss_pred -CCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCc----EEEEEccCCcccceEEEEEC-CCCCEEEEECCCCeEEE
Confidence 8999999999999995 99999999999999998542 222222 223479999999 78899999999999999
Q ss_pred EEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 242 WDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 242 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
||+.+++.+..+.+ |...|.+++|+|++. +|++|+.||.|++||
T Consensus 297 wd~~~~~~~~~~~~------------h~~~v~~~~~s~dg~--~l~s~s~D~~i~iWd 340 (340)
T 1got_B 297 WDALKADRAGVLAG------------HDNRVSCLGVTDDGM--AVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTCCEEEEEEC------------CSSCEEEEEECTTSS--CEEEEETTSCEEEEC
T ss_pred EEcccCcEeeEeec------------CCCcEEEEEEcCCCC--EEEEEcCCccEEecC
Confidence 99999999888887 779999999999999 889999999999996
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-43 Score=312.06 Aligned_cols=289 Identities=16% Similarity=0.196 Sum_probs=258.4
Q ss_pred eeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEc
Q 016457 33 QTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111 (389)
Q Consensus 33 ~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~ 111 (389)
..+.+ .+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.||.|++||+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT--KYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTTEEEEEET
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCC--CEEEEEeCCCeEEEEEC
Confidence 34556 8899999999999999999999999999999999999999999999999999998 79999999999999999
Q ss_pred cCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCce-----------eeeeeecccC--CeeEE
Q 016457 112 RSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQ-----------VACLEESHVE--DVTQV 173 (389)
Q Consensus 112 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~-----------~~~~~~~~~~--~v~~~ 173 (389)
.+++.+..+. +...+.+++|+|++..+++++.+ +.|++||++.... +..+. .|.. .+.++
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 181 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAATVA 181 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCEEEE
T ss_pred CCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccceeEE
Confidence 9999999888 77999999999999999999988 9999999987643 23333 4555 89999
Q ss_pred EEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEe
Q 016457 174 HFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF 253 (389)
Q Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 253 (389)
+|+|++. .|++++.||.|++||+++. ...+..+..|...|.+++|+ +++.+|++++.|+.|++||+.+++.+..+
T Consensus 182 ~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 182 GWSTKGK-YIIAGHKDGKISKYDVSNN---YEYVDSIDLHEKSISDMQFS-PDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EECGGGC-EEEEEETTSEEEEEETTTT---TEEEEEEECCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEcCCCC-EEEEEcCCCEEEEEECCCC---cEeEEEEecCCCceeEEEEC-CCCCEEEEecCCceEEEEECCCCceeeee
Confidence 9999995 9999999999999999952 35566777789999999999 68899999999999999999999988887
Q ss_pred ecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc--------------eEEEEEeccCCccccCCCeEEEeccc
Q 016457 254 ENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG--------------TVGYFPVNYGGAATIGPPEAVLVGGH 319 (389)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg--------------~i~i~~~~~~~~~~~~~~~~~~~~~h 319 (389)
. +...+..++|+|+++ ++++++.++ .+++||..+++. +..+. +|
T Consensus 257 ~-------------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~------~~~~~-~~ 314 (369)
T 3zwl_B 257 E-------------TDCPLNTAVITPLKE--FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE------IGRVQ-GH 314 (369)
T ss_dssp E-------------CSSCEEEEEECSSSS--EEEEEECCC-------------CEEEEEETTTCCE------EEEEE-CC
T ss_pred c-------------CCCCceeEEecCCCc--eEEEeecCCCceEEEEecCCCcceeEEEecCCCcc------hhhee-cc
Confidence 7 347899999999999 888888887 899999998776 56665 89
Q ss_pred ceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 320 TAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 320 ~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
...|.++ +|+|++++|++++.||.|++|+++..
T Consensus 315 ~~~v~~~---------~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 315 FGPLNTV---------AISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp SSCEEEE---------EECTTSSEEEEEETTSEEEEEEECHH
T ss_pred cCcEEEE---------EECCCCCEEEEEcCCCeEEEEECccc
Confidence 9999999 99999999999999999999999875
No 26
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.9e-44 Score=304.76 Aligned_cols=272 Identities=13% Similarity=0.145 Sum_probs=239.2
Q ss_pred CCCCccccCCCCeEEEEecCc--eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEE
Q 016457 10 SQPKSQSCDNVNSIKRFGLKN--SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQI 86 (389)
Q Consensus 10 ~~~~~~s~~~~~~i~~w~~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i 86 (389)
+.+..++++.|++|++||+.+ .+..+.+ ...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.++
T Consensus 24 ~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~ 103 (304)
T 2ynn_A 24 TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (304)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEE
Confidence 445678999999999999863 5666776 8899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCEEEEEecCCeEEEEEccCC-eEEEEEEcCCCCeEEEEEeCC-CCeEEEeecCCeEEEEECcCCceeeeeee
Q 016457 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSF-HEVWSVTAGSQEIFCFSFGGS-TDYLLAAGCGSQIQFWDWRNKKQVACLEE 164 (389)
Q Consensus 87 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 164 (389)
+|+|++ .+|++|+.|++|++||++++ .....+.+|...|.+++|+|. +..+++++.|+.|++||+++......+..
T Consensus 104 ~~~~~~--~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 181 (304)
T 2ynn_A 104 AVHPTK--PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (304)
T ss_dssp EECSSS--SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEcCCC--CEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc
Confidence 999999 79999999999999999987 556778899999999999984 57788888999999999998887777765
Q ss_pred cccCCeeEEEEec--CCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEE
Q 016457 165 SHVEDVTQVHFVP--NNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW 242 (389)
Q Consensus 165 ~~~~~v~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~ 242 (389)
.|...+..+.|+| ++ .+|++++.|+.|++||++++ ..+..+.+|...|..++|+ +++.+|++++.|++|++|
T Consensus 182 ~~~~~v~~~~~~~~~~~-~~l~s~s~D~~i~iWd~~~~----~~~~~~~~h~~~v~~~~~~-p~~~~l~s~s~Dg~i~iW 255 (304)
T 2ynn_A 182 GQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFH-PTLPIIISGSEDGTLKIW 255 (304)
T ss_dssp CCTTCEEEEEECCSTTC-CEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSCEEEE
T ss_pred CCcCcEEEEEEEEcCCC-CEEEEEcCCCeEEEEeCCCC----ccceeeCCCCCCEEEEEEC-CCCCEEEEEcCCCeEEEE
Confidence 6778899999987 55 49999999999999999954 5677788899999999999 778899999999999999
Q ss_pred EcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 243 DWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 243 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
|+.+++.+..+.. |...+.+++|+|++...++++|+.|| +.+|++..
T Consensus 256 d~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 256 NSSTYKVEKTLNV------------GLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp ETTTCCEEEEECC------------SSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred ECCCCceeeeccC------------CCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999999999876 55889999999988765678887666 77777654
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-43 Score=308.13 Aligned_cols=279 Identities=11% Similarity=0.165 Sum_probs=245.5
Q ss_pred cCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeee---ec--CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEc
Q 016457 37 GDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGE---CK--GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111 (389)
Q Consensus 37 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~---~~--~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~ 111 (389)
+.+.|++++|+|++++|++++ ||.|++||+.+++.... +. +|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG--CTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS--SEEEEEESSSEEEEEEC
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC--CEEEEEcCCCcEEEEEC
Confidence 388999999999999999999 99999999987654333 32 789999999999998 79999999999999999
Q ss_pred cCCe--EEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC
Q 016457 112 RSFH--EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189 (389)
Q Consensus 112 ~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 189 (389)
.+++ ....+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+. .|...+.+++|+|++. .|++++.|
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~d 204 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ-GHTDGASCIDISNDGT-KLWTGGLD 204 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSS-EEEEEETT
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee-cccCceEEEEECCCCC-EEEEEecC
Confidence 9877 667788889999999999999999999999999999999999998888 8999999999999995 99999999
Q ss_pred CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCC
Q 016457 190 GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDV 269 (389)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (389)
+.|++||++++. ......+...+.+++|+ +++.++++++.++.|++||+.+++.. .+.. |.
T Consensus 205 g~i~~~d~~~~~-----~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~------------~~ 265 (337)
T 1gxr_A 205 NTVRSWDLREGR-----QLQQHDFTSQIFSLGYC-PTGEWLAVGMESSNVEVLHVNKPDKY-QLHL------------HE 265 (337)
T ss_dssp SEEEEEETTTTE-----EEEEEECSSCEEEEEEC-TTSSEEEEEETTSCEEEEETTSSCEE-EECC------------CS
T ss_pred CcEEEEECCCCc-----eEeeecCCCceEEEEEC-CCCCEEEEEcCCCcEEEEECCCCCeE-EEcC------------Cc
Confidence 999999999542 23334577889999999 78899999999999999999987654 3333 67
Q ss_pred CceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecC
Q 016457 270 DYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGE 349 (389)
Q Consensus 270 ~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~ 349 (389)
..+.+++|+|+++ +|++++.||.|++|++.+++. +. . ..|...|.++ +|+|++++|++++.
T Consensus 266 ~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~------~~-~-~~~~~~v~~~---------~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 266 SCVLSLKFAYCGK--WFVSTGKDNLLNAWRTPYGAS------IF-Q-SKESSSVLSC---------DISVDDKYIVTGSG 326 (337)
T ss_dssp SCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCE------EE-E-EECSSCEEEE---------EECTTSCEEEEEET
T ss_pred cceeEEEECCCCC--EEEEecCCCcEEEEECCCCeE------EE-E-ecCCCcEEEE---------EECCCCCEEEEecC
Confidence 8999999999999 889999999999999998775 32 2 2588899999 99999999999999
Q ss_pred CCeEEEEec
Q 016457 350 DGRLCCWLS 358 (389)
Q Consensus 350 dg~v~iW~~ 358 (389)
||.|++|++
T Consensus 327 dg~i~iw~~ 335 (337)
T 1gxr_A 327 DKKATVYEV 335 (337)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999997
No 28
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=311.60 Aligned_cols=247 Identities=16% Similarity=0.119 Sum_probs=211.9
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeee----ecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGE----CKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~ 113 (389)
...|.+++|+|++ .|++|+.||+|+|||+.+++.+.. +.+|.+.|++++|+|++ ++|++|+.|++|++||+.+
T Consensus 82 ~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg--~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 82 EAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG--TQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp SSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC--CEEEEEeCCCeEEEEECCC
Confidence 5679999999986 788999999999999998876543 35899999999999999 7999999999999999999
Q ss_pred CeEEEEEEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEEECcCCceeeeee-ecccCCeeEEEEecCCCCeEEEEeCCCc
Q 016457 114 FHEVWSVTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFWDWRNKKQVACLE-ESHVEDVTQVHFVPNNQNKVVSASVDGL 191 (389)
Q Consensus 114 ~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 191 (389)
++++..+.+|...|.+++|+|++.. +++++.|+.|++||+++++....+. ..+...+.+++|+|++.++|++|+.||.
T Consensus 159 ~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 159 QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc
Confidence 9999999999999999999998864 6677789999999999998887764 2455679999999977668999999999
Q ss_pred EEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCc
Q 016457 192 ICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDY 271 (389)
Q Consensus 192 i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (389)
|++||++++ +.+..+..|...|.+++|+|....+|++++.|++|++||+.+++.+. +.+ |...
T Consensus 239 v~~wd~~~~----~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~------------H~~~ 301 (344)
T 4gqb_B 239 VSLVDTKST----SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA------------HRDF 301 (344)
T ss_dssp EEEEESCC------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC------------CSSC
T ss_pred EEEEECCCC----cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC------------CCCC
Confidence 999999954 56778889999999999995445789999999999999999887653 444 7899
Q ss_pred eeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 272 FVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 272 i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
|.+++|+|+++. +|++|+.||+|++|++.+...
T Consensus 302 V~~v~~sp~~~~-llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 302 VRDATWSPLNHS-LLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEEEEECSSSTT-EEEEEETTSCEEEEECCC---
T ss_pred EEEEEEeCCCCe-EEEEEcCCCeEEEEECCCCCC
Confidence 999999999875 467999999999999987543
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-43 Score=313.11 Aligned_cols=300 Identities=13% Similarity=0.114 Sum_probs=245.8
Q ss_pred eeeeec-CcceEEEeecCCC-CeEEEEecCCeEEEEeCCCceeeeeec--CCCCcEEEEEEeC-CCCCCEEEEEecCCeE
Q 016457 32 IQTNFG-DDYVFEIVPKNDW-SLMAVSLSTNVVKLYSPVTGQYSGECK--GHSSTVNQISFSG-PSTPHVLHSCSSDGTI 106 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~~l~s~~~dg~i 106 (389)
...+.+ ...|++++|+|++ ++|++|+.||.|+|||+.+++....+. +|...|.+++|+| ++ .+|++++.|+.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~~l~s~~~d~~i 143 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT--NQLFVSSIRGAT 143 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE--EEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC--CEEEEEeCCCEE
Confidence 445556 8899999999999 999999999999999999887776665 6999999999999 55 799999999999
Q ss_pred EEEEccCCeEEEEEEcC---CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeE
Q 016457 107 RAWDTRSFHEVWSVTAG---SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKV 183 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 183 (389)
++||+.+ ..+..+..+ ...|.+++|+|++..+++++.|+.|++||+ +++.+..+. .|...|.+++|+|+++.+|
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~-~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK-LHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE-CSSSCEEEEEECSSCTTEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec-cCCCcEEEEEECCCCCCEE
Confidence 9999985 566666655 378999999999999999999999999999 577888887 8999999999999996589
Q ss_pred EEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccccccc--
Q 016457 184 VSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLAS-- 261 (389)
Q Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-- 261 (389)
++++.|+.|++||+++.......+. ...|...|.+++|+|.++.+|++++.|+.|++||+++++.+..+..+.....
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIA-EMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEE-EEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEeCCCEEEEEeCCCCCcccceEE-EecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 9999999999999996432223333 3478999999999942889999999999999999999887776664321110
Q ss_pred -----CCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecc--cceeeeeccCCCcccC
Q 016457 262 -----DSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGG--HTAVVRSVLPMPSVQG 334 (389)
Q Consensus 262 -----~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~ 334 (389)
..|. ....+..++|+|+++ + +|+.||.|++||+.+++. +..+. + |...+..+
T Consensus 300 ~~~~~~~~~--p~~~~~~~~~s~dg~--~--s~s~d~~i~iwd~~~~~~------~~~l~-~~~~~~~~~~~-------- 358 (383)
T 3ei3_B 300 LTPIKATWH--PMYDLIVAGRYPDDQ--L--LLNDKRTIDIYDANSGGL------VHQLR-DPNAAGIISLN-------- 358 (383)
T ss_dssp SCCCCCEEC--SSSSEEEEECBCCTT--T--CTTCCCCEEEEETTTCCE------EEEEC-BTTBCSCCCEE--------
T ss_pred ccceEEecc--CCCCceEEEecCCcc--c--ccCCCCeEEEEecCCCce------eeeec-CCCCCceEEEE--------
Confidence 0111 123455577777776 4 888999999999998776 56665 4 45777777
Q ss_pred CCCCCCceeEEEecCCCeEEEEeccC
Q 016457 335 RPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|+|++++|++|+ ||.|++|+++.
T Consensus 359 -~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 359 -KFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp -EECTTSSEEEEEE-TTEEEEEECC-
T ss_pred -EEecCccEEEEec-CCcEEEEecCC
Confidence 9999999999997 99999999875
No 30
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.1e-43 Score=313.78 Aligned_cols=285 Identities=18% Similarity=0.215 Sum_probs=249.3
Q ss_pred ceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec--CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE
Q 016457 40 YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK--GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 117 (389)
.++.|+|++++ +||+|. |++|+|||..+|+....+. +|...|++|+|+|++ ++|++|+.||+|++||+.+++.+
T Consensus 107 y~~~l~wS~~n-~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg--~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 107 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG--NYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEE
T ss_pred cceeEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC--CEEEEEECCCeEEEEEcCCCcEE
Confidence 46779999864 888876 9999999999998877654 678889999999999 79999999999999999999999
Q ss_pred EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc-eeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEe
Q 016457 118 WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK-QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196 (389)
Q Consensus 118 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 196 (389)
..+.+|...+.+++++ +..+++++.|+.+++||.+... .+..+. +|...+..+.++|++. .+++++.|+.+++||
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGR-HLASGGNDNLVNVWP 258 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCC-eeeeeeccccceEEe
Confidence 9999999999999985 5788888899999999998754 456666 8999999999999996 999999999999999
Q ss_pred cCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEE--ecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceee
Q 016457 197 TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCL--THIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
..++......+.....|...|.+++|+|.+..+++++ +.|+.|++||+.++++...+.. ...+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~-------------~~~v~~ 325 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA-------------HSQVCS 325 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-------------SSCEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-------------ccceee
Confidence 9977655566777788999999999997777777765 4689999999999999888774 367899
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEE
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLC 354 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~ 354 (389)
+.|+++++.+++++|+.||.|+|||+.+++. +..+. +|...|+++ +|+|||++|+|||.||+|+
T Consensus 326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~------v~~l~-gH~~~V~~l---------~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 326 ILWSPHYKELISGHGFAQNQLVIWKYPTMAK------VAELK-GHTSRVLSL---------TMSPDGATVASAAADETLR 389 (420)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCE------EEEEC-CCSSCEEEE---------EECTTSSCEEEEETTTEEE
T ss_pred eeecCCCCeEEEEEecCCCEEEEEECCCCcE------EEEEc-CCCCCEEEE---------EEcCCCCEEEEEecCCeEE
Confidence 9999999965445566899999999998776 67776 999999999 9999999999999999999
Q ss_pred EEeccCC
Q 016457 355 CWLSDDS 361 (389)
Q Consensus 355 iW~~~~~ 361 (389)
||++.+.
T Consensus 390 iWdv~~~ 396 (420)
T 4gga_A 390 LWRCFEL 396 (420)
T ss_dssp EECCSCS
T ss_pred EEECCCC
Confidence 9999765
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.7e-44 Score=318.15 Aligned_cols=316 Identities=11% Similarity=0.083 Sum_probs=255.6
Q ss_pred CccccCCCCeEEEEecCcee--eeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeC
Q 016457 13 KSQSCDNVNSIKRFGLKNSI--QTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSG 90 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~ 90 (389)
..++++.|+.|++|++.... ..+.....+....|+|++++|++|+.||.|++||+.+++....+.+|...|.+++|+|
T Consensus 70 ~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~ 149 (420)
T 3vl1_A 70 HLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFP 149 (420)
T ss_dssp TEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECT
T ss_pred eEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECC
Confidence 45678889999999986432 2222344455567899999999999999999999999999888889999999999999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee--cccC
Q 016457 91 PSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE--SHVE 168 (389)
Q Consensus 91 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~ 168 (389)
++ ++|++|+.|+.|++||+.+++.+..+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+.. .+..
T Consensus 150 ~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~ 227 (420)
T 3vl1_A 150 SG--EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHD 227 (420)
T ss_dssp TS--SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTC
T ss_pred CC--CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCC
Confidence 98 7999999999999999999999999999999999999999999999999999999999999988887762 2333
Q ss_pred CeeE---------------------EEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceee-eccCCceeeEEEecCC
Q 016457 169 DVTQ---------------------VHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV-INVGTSVGKVGFFGET 226 (389)
Q Consensus 169 ~v~~---------------------~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 226 (389)
.+.+ ++|+|++. +|++++.||.|++||++++. ....+ ..|...|.+++|+ ++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~-~~ 301 (420)
T 3vl1_A 228 GVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKE----QTIQLPSKFTCSCNSLTVD-GN 301 (420)
T ss_dssp CEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCC----EEEEECCTTSSCEEEEEEC-SS
T ss_pred CccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCc----eeEEcccccCCCceeEEEe-CC
Confidence 4444 45577885 99999999999999998542 23333 3577899999999 55
Q ss_pred Cc-EEEEEecCCcEEEEEcCCCce-eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 227 NK-HLWCLTHIETLSIWDWKDGQN-VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 227 ~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
+. +|++++.||.|++||+++++. +..+..+ |...+..+.+ ++++ +|++++.||.|++|++....
T Consensus 302 ~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~-~~~~--~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 302 NANYIYAGYENGMLAQWDLRSPECPVGEFLIN-----------EGTPINNVYF-AAGA--LFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp CTTEEEEEETTSEEEEEETTCTTSCSEEEEES-----------TTSCEEEEEE-ETTE--EEEEETTTEEEEEEEECCTT
T ss_pred CCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc-----------CCCCceEEEe-CCCC--EEEEecCCccEEEEeccCCC
Confidence 55 999999999999999998754 6666652 4466777755 5666 88999999999999998743
Q ss_pred ccc---cCCCeEEEecccceeeeeccCCCcccCCCCCCCce---eEEEecCCCeEEEEeccC
Q 016457 305 AAT---IGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI---FGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 305 ~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~---~l~s~~~dg~v~iW~~~~ 360 (389)
... .......+ .+|...|.++ +|+|+++ .|++++.+|.+.+|+++.
T Consensus 368 ~~~~~~~~~~~~~~-~~~~~~v~~~---------~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 368 SERPAIEFETPTFL-VSNDDAVSQF---------CYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSCEECTTSCEEE-CCSSCCCCEE---------EEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CCccceeccCccEE-ccCCcceEEE---------EEccCCCCcceEEEEcCCceEEEEeccC
Confidence 210 00111223 3777888888 9999999 677777799999999875
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.2e-43 Score=310.60 Aligned_cols=295 Identities=15% Similarity=0.146 Sum_probs=249.3
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce--eeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ--YSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH 115 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 115 (389)
.++|++++|+|++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++ ++|++++.||.|++||+.+++
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS--NRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT--TEEEEEETTSCEEEEEEETTE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC--CEEEEEcCCCeEEEEECCCCe
Confidence 6889999999999999999999999999999887 888899999999999999998 799999999999999999887
Q ss_pred EEEEE--EcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce---eeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 116 EVWSV--TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 116 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
....+ ..|...|.+++|+|++..+++++.|+.|++||++.+.. ...+..+|...|.+++|+|++. +|++++.|+
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg 164 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LLAAGSCDF 164 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EEEEEETTS
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EEEEEcCCC
Confidence 65554 55788999999999999999999999999999998763 3444337889999999999995 999999999
Q ss_pred cEEEEecCCCC--------------CCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecc
Q 016457 191 LICTFDTGGDI--------------NDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENA 256 (389)
Q Consensus 191 ~i~i~d~~~~~--------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 256 (389)
.|++||++... .....+..+..|...|.+++|+ +++.+|++++.|+.|++||+++++.+..+..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~- 242 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS-ANGSRVAWVSHDSTVCLADADKKMAVATLAS- 242 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC-SSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC-CCCCEEEEEeCCCEEEEEECCCCceeEEEcc-
Confidence 99999975321 1234455566788999999999 7788999999999999999999999988886
Q ss_pred cccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc--CCccc--------------------------c
Q 016457 257 RSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY--GGAAT--------------------------I 308 (389)
Q Consensus 257 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~--~~~~~--------------------------~ 308 (389)
|...+.+++|+|++. +|++| .|+.|++|++.+ ++... .
T Consensus 243 -----------~~~~v~~~~~~~~~~--~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (372)
T 1k8k_C 243 -----------ETLPLLAVTFITESS--LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKK 308 (372)
T ss_dssp -----------SSCCEEEEEEEETTE--EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCC
T ss_pred -----------CCCCeEEEEEecCCC--EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccc
Confidence 668999999999987 77777 899999999988 42100 0
Q ss_pred CCCe------EEEecccceeeeeccCCCcccCCCCC-CCc---eeEEEecCCCeEEEEeccC
Q 016457 309 GPPE------AVLVGGHTAVVRSVLPMPSVQGRPAQ-SHG---IFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 309 ~~~~------~~~~~~h~~~v~~~~~~~~~~~~~~s-~~~---~~l~s~~~dg~v~iW~~~~ 360 (389)
+... ..+..+|...|+++ +|. ++| .+|+||+.||.|++|++..
T Consensus 309 ~~~~~~~~~~~~~~~~h~~~v~~~---------~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 309 ASSEGSAAAGAGLDSLHKNSVSQI---------SVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp C---------CCCSSSSSSCEEEE---------EEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cccccCccccccccccccCCccee---------EEecCCCcceeeEEEecCCCceEEEEecC
Confidence 0111 22334899999999 755 676 8999999999999999875
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.2e-43 Score=300.08 Aligned_cols=273 Identities=14% Similarity=0.183 Sum_probs=233.6
Q ss_pred CccccCCCCeEEEEecCc-------eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEE
Q 016457 13 KSQSCDNVNSIKRFGLKN-------SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVN 84 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~-------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~ 84 (389)
..++++.|++|++|++.. ++..+.+ ...|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~ 111 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM 111 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE
Confidence 578999999999999742 4566777 88999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCC------CeEEEeecCCeEEEEECcCCce
Q 016457 85 QISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST------DYLLAAGCGSQIQFWDWRNKKQ 158 (389)
Q Consensus 85 ~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~~~d~~i~iwd~~~~~~ 158 (389)
+++|+|++ .+|++|+.|++|++||++ ++.+..+.+|...|.+++|.|.. ..+++++.|+.|++||+++.+.
T Consensus 112 ~~~~~~~~--~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~ 188 (319)
T 3frx_A 112 SVDIDKKA--SMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188 (319)
T ss_dssp EEEECTTS--CEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEcCCC--CEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh
Confidence 99999998 799999999999999996 56778889999999999999854 3788899999999999999988
Q ss_pred eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCc
Q 016457 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIET 238 (389)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~ 238 (389)
...+. +|...|.+++|+|++. +|++++.||.|++||++++ ..+..+ .+...|.+++|+ +++.+|++++. +.
T Consensus 189 ~~~~~-~h~~~v~~~~~sp~g~-~l~s~~~dg~i~iwd~~~~----~~~~~~-~~~~~v~~~~~s-p~~~~la~~~~-~~ 259 (319)
T 3frx_A 189 EADFI-GHNSNINTLTASPDGT-LIASAGKDGEIMLWNLAAK----KAMYTL-SAQDEVFSLAFS-PNRYWLAAATA-TG 259 (319)
T ss_dssp EEEEC-CCCSCEEEEEECTTSS-EEEEEETTCEEEEEETTTT----EEEEEE-ECCSCEEEEEEC-SSSSEEEEEET-TE
T ss_pred heeec-CCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCC----cEEEEe-cCCCcEEEEEEc-CCCCEEEEEcC-CC
Confidence 88888 8999999999999996 9999999999999999954 333333 345789999999 67888877765 45
Q ss_pred EEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 239 LSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 239 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+++|++.....+..+...... ....|...+.+++|+|+|+ +|++|+.||.|++||+.++
T Consensus 260 i~v~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~spdg~--~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 260 IKVFSLDPQYLVDDLRPEFAG----YSKAAEPHAVSLAWSADGQ--TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTEEEEEEECCCCTT----CCGGGCCCEEEEEECTTSS--EEEEEETTSCEEEEEEEEC
T ss_pred cEEEEeCcCeeeeccCccccc----cccCcCcceeEEEECCCCC--EEEEeecCceEEEEEEeec
Confidence 999999887776665432110 1112557789999999999 8999999999999999864
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=8e-44 Score=319.76 Aligned_cols=296 Identities=13% Similarity=0.055 Sum_probs=232.3
Q ss_pred CcceEEEeecC-CCCeEEEEecCCeEEEEeCCCcee--eeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC
Q 016457 38 DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQY--SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF 114 (389)
Q Consensus 38 ~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 114 (389)
...|+|++|+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|++|+|+|.+. .+|++|+.||+|++||++++
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~-~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNT-NQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCT-TEEEEECSSSCEEEEETTSC
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCC-CEEEEEeCCCEEEEeeccCC
Confidence 67799999999 567999999999999999987654 345568999999999998432 79999999999999999876
Q ss_pred eEEEEEEcC--CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcE
Q 016457 115 HEVWSVTAG--SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLI 192 (389)
Q Consensus 115 ~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 192 (389)
........+ ...+.+++|+|++..+++++.||.|++||++ ++.+..+. +|...|++++|+|+++.+|++++.|+.|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEe-cccceEEeeeecCCCceEEEEecCccee
Confidence 544333333 4467899999999999999999999999986 45667777 8999999999999987789999999999
Q ss_pred EEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCce
Q 016457 193 CTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 193 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (389)
++||+++... ...+.....|...|.+++|+ +++.+|++++.|+.|++||+.+++....+..+..... ....+
T Consensus 276 ~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~s-pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~ 347 (435)
T 4e54_B 276 KIWDLRQVRG-KASFLYSLPHRHPVNAACFS-PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF------QHLTP 347 (435)
T ss_dssp CEEETTTCCS-SSCCSBCCBCSSCEEECCBC-TTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC------SSSCC
T ss_pred eEEecccccc-cceEEEeeeccccccceeEC-CCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc------cccee
Confidence 9999986532 22333445788999999999 7889999999999999999999988777665321110 01122
Q ss_pred eeecccCCCCeEEEEE------------ecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCC
Q 016457 273 VDCHYPGEGENLWVIG------------GTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSH 340 (389)
Q Consensus 273 ~~~~~~~~~~~~~l~~------------g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 340 (389)
..+.|+|++. ++++ +..++.|++||..+++. +..+..+|...|.++. +|+|+
T Consensus 348 ~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~------~~~l~~~~~~~v~s~~--------~fspd 411 (435)
T 4e54_B 348 IKAAWHPRYN--LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM------MCQLYDPESSGISSLN--------EFNPM 411 (435)
T ss_dssp CBCEECSSSS--CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE------EEEECCSSCCCCCCEE--------EECTT
T ss_pred EEEEEcCCCC--EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE------EEEEeCCCCCcEEEEE--------EECCC
Confidence 3344555444 2333 33446899999998876 6777667888888872 69999
Q ss_pred ceeEEEecCCCeEEEEeccCC
Q 016457 341 GIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 341 ~~~l~s~~~dg~v~iW~~~~~ 361 (389)
|++|++|+ |+.|+||+++++
T Consensus 412 g~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 412 GDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp SSCEEEEC-SSEEEECCCC--
T ss_pred CCEEEEEc-CCcEEEEECCcC
Confidence 99999987 889999998865
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-43 Score=309.37 Aligned_cols=291 Identities=13% Similarity=0.150 Sum_probs=243.1
Q ss_pred CcceEEEeecCC----CCeEEEEecCCeEEEEeCCCceeeeeecC-----CCCcEEEEEEeCCCC--CCEEEEEecCCeE
Q 016457 38 DDYVFEIVPKND----WSLMAVSLSTNVVKLYSPVTGQYSGECKG-----HSSTVNQISFSGPST--PHVLHSCSSDGTI 106 (389)
Q Consensus 38 ~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~i~~~~~~~--~~~l~s~~~dg~i 106 (389)
.+.|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|++. +.+|++|+.||.|
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEE
Confidence 889999999984 45666666788999999998877766653 557899999999942 1699999999999
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECcCCceeeee---eecccCCeeEEEEecCCCCe
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWRNKKQVACL---EESHVEDVTQVHFVPNNQNK 182 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~ 182 (389)
++||+.+++.+..+..|...|.+++|+| ++..+++++.||.|++||+++++.+..+ . .|...|.+++|+|++. .
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~ 175 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE-GHRDEVLSADYDLLGE-K 175 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT-SCSSCEEEEEECTTSS-E
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc-cccCceeEEEECCCCC-E
Confidence 9999999999999999999999999999 7888999999999999999999988887 4 7999999999999995 9
Q ss_pred EEEEeCCCcEEEEecCCCCCCC------------------------ccceeeeccCCceeeEEEecCCCcEEEEEecCCc
Q 016457 183 VVSASVDGLICTFDTGGDINDD------------------------DLLESVINVGTSVGKVGFFGETNKHLWCLTHIET 238 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~ 238 (389)
|++++.||.|++||++++.... ........|...|.+++|+ ++++++++.|+.
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~ 252 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENA 252 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSE
T ss_pred EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCE
Confidence 9999999999999998542100 0011222388899999998 459999999999
Q ss_pred EEEEEcCCCce--------------eEEeecccccccCCccCCCCCceeeecccCC--CCeEEEEEecCCceEEEEEecc
Q 016457 239 LSIWDWKDGQN--------------VASFENARSLASDSWTLDDVDYFVDCHYPGE--GENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 239 i~i~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
|++||+.++.. +..+.. |...+.+++|+|+ ++ +|++|+.||.|++||+.+
T Consensus 253 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~~--~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 253 IVCWKPGKMEDDIDKIKPSESNVTILGRFDY------------SQCDIWYMRFSMDFWQK--MLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC------------SSCCSSCCCCEECTTSS--EEEEECTTSCEEEEECCS
T ss_pred EEEEeCCCccccccccccCCcchheeccccc------------cCCcEEEEEEcCCCCCc--EEEEEecCCcEEEEECCC
Confidence 99999987654 445544 6688999999999 88 899999999999999998
Q ss_pred CCccccCCCeEEEeccc--ceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 303 GGAATIGPPEAVLVGGH--TAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 303 ~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
++... .....+. +| ...|.++ +|+|++++|++|+.||.|++|++.
T Consensus 319 ~~~~~--~~~~~~~-~~~~~~~v~~~---------~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 EDPHK--AKCTTLT-HHKCGAAIRQT---------SFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSGGG--CEEEEEC-CTTCCSCEEEE---------EECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCcc--ccceEEc-ccccCCceEEE---------EeCCCCCeEEEEeCCCEEEEEEec
Confidence 76411 1123454 66 6899999 999999999999999999999985
No 36
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=297.19 Aligned_cols=285 Identities=18% Similarity=0.214 Sum_probs=244.9
Q ss_pred ceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec--CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE
Q 016457 40 YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK--GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 117 (389)
..++|+||+++ +||+|. |++|+|||+++++.+..+. +|...|++++|+|++ ++|++|+.||+|++||+++++.+
T Consensus 27 y~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~--~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG--NYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp TCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEE
T ss_pred cceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC--CEEEEEECCCcEEEeecCCceeE
Confidence 45789999986 788775 9999999999999887664 678889999999999 79999999999999999999999
Q ss_pred EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce-eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEe
Q 016457 118 WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ-VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFD 196 (389)
Q Consensus 118 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 196 (389)
..+.+|...+.++.+. +..+++++.++.+++|+...... +..+. +|...+.++.+.+++. .+++++.|+.|++||
T Consensus 103 ~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGR-HLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEECCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred EEecCccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEc-CccCceEEEEEcCCCC-EEEEEecCcceeEEE
Confidence 9999998888887764 67888888899999999987644 45555 8999999999999996 999999999999999
Q ss_pred cCCCCCCCccceeeeccCCceeeEEEecCCCcEEE--EEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceee
Q 016457 197 TGGDINDDDLLESVINVGTSVGKVGFFGETNKHLW--CLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
++++............+...|..+++++.+...+. +++.++.|++||........... +...+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-------------~~~~v~~ 245 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-------------AHSQVCS 245 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-------------CSSCEEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-------------ceeeeee
Confidence 99776555566667778889999999966666554 45678899999999887766654 4577899
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEE
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLC 354 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~ 354 (389)
+.|+++++.+++++|+.|+.|++||+.+++. +..+. +|...|+++ +|+|+|++|+|||.||+|+
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~------~~~l~-gH~~~V~~l---------~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAK------VAELK-GHTSRVLSL---------TMSPDGATVASAAADETLR 309 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCE------EEEEC-CCSSCEEEE---------EECTTSSCEEEEETTTEEE
T ss_pred eeecccccceEEEEEcCCCEEEEEECCCCcE------EEEEc-CCCCCEEEE---------EEcCCCCEEEEEecCCeEE
Confidence 9999999966556677899999999998876 67776 999999999 9999999999999999999
Q ss_pred EEeccCC
Q 016457 355 CWLSDDS 361 (389)
Q Consensus 355 iW~~~~~ 361 (389)
|||+.+.
T Consensus 310 iWd~~~~ 316 (318)
T 4ggc_A 310 LWRCFEL 316 (318)
T ss_dssp EECCSCC
T ss_pred EEECCCC
Confidence 9998653
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-43 Score=314.48 Aligned_cols=301 Identities=14% Similarity=0.161 Sum_probs=251.3
Q ss_pred CCCeEEEEecCceeeeeec---CcceEEEeecCCCC-eEEEEecCCeEEEEeC----CCce------eeeeecC------
Q 016457 19 NVNSIKRFGLKNSIQTNFG---DDYVFEIVPKNDWS-LMAVSLSTNVVKLYSP----VTGQ------YSGECKG------ 78 (389)
Q Consensus 19 ~~~~i~~w~~~~~~~~~~~---~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~----~~~~------~~~~~~~------ 78 (389)
....+.+|+.......+.. .+.|++++|+|+++ +||+|+.||.|++|++ .+++ ....+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (425)
T 1r5m_A 23 TNSIDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSA 102 (425)
T ss_dssp -----------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-
T ss_pred cccccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccc
Confidence 3445678887766665554 58999999999999 9999999999999999 8877 4444443
Q ss_pred ----CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECc
Q 016457 79 ----HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR 154 (389)
Q Consensus 79 ----~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 154 (389)
|...|.+++|+|++ ++|++++.||.|++|| .+++.+..+..|...|.+++|+|++..+++++.|+.|++||++
T Consensus 103 ~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 103 SSGKTTNQVTCLAWSHDG--NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp -----CBCEEEEEECTTS--SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred cccCCCCceEEEEEcCCC--CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 67899999999998 7999999999999999 6788889999999999999999999999999999999999999
Q ss_pred CCceeeeeeecccCC---------------eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceee
Q 016457 155 NKKQVACLEESHVED---------------VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGK 219 (389)
Q Consensus 155 ~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~ 219 (389)
+++.+..+. .+... +.+++|+|++ .+++++.++.|++||++++ ..+..+..|...|.+
T Consensus 180 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~----~~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 180 SGTVMQHFE-LKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEK----TPTGKLIGHHGPISV 252 (425)
T ss_dssp TTEEEEEEC-CC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCS----SCSEEECCCSSCEEE
T ss_pred CCcEEEEee-ccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCC----ceeeeeccCCCceEE
Confidence 999888887 56655 9999999985 7999999999999999954 456667788999999
Q ss_pred EEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 220 VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 220 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
++|+ +++.+|++++.|+.|++||+.+++.+..+.. |...+.+++|+|++ ++++++.||.|++||
T Consensus 253 ~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~~~~~---~l~~~~~d~~i~i~d 316 (425)
T 1r5m_A 253 LEFN-DTNKLLLSASDDGTLRIWHGGNGNSQNCFYG------------HSQSIVSASWVGDD---KVISCSMDGSVRLWS 316 (425)
T ss_dssp EEEE-TTTTEEEEEETTSCEEEECSSSBSCSEEECC------------CSSCEEEEEEETTT---EEEEEETTSEEEEEE
T ss_pred EEEC-CCCCEEEEEcCCCEEEEEECCCCccceEecC------------CCccEEEEEECCCC---EEEEEeCCCcEEEEE
Confidence 9999 6788999999999999999999988888876 66899999999987 678999999999999
Q ss_pred eccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 300 VNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+.+++. +..+. .|...|.++ +|+|++++|++++.||.|++|++...
T Consensus 317 ~~~~~~------~~~~~-~~~~~i~~~---------~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 317 LKQNTL------LALSI-VDGVPIFAG---------RISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TTTTEE------EEEEE-CTTCCEEEE---------EECTTSSEEEEEETTSCEEEEECHHH
T ss_pred CCCCcE------eEecc-cCCccEEEE---------EEcCCCCEEEEEECCCeEEEEECCCC
Confidence 988765 55565 889999999 99999999999999999999999754
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1e-42 Score=330.57 Aligned_cols=287 Identities=18% Similarity=0.231 Sum_probs=241.7
Q ss_pred eeec-CcceEEEeecCCC-CeEEEEecCCeEEEEeCCCc-----eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeE
Q 016457 34 TNFG-DDYVFEIVPKNDW-SLMAVSLSTNVVKLYSPVTG-----QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTI 106 (389)
Q Consensus 34 ~~~~-~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i 106 (389)
.+.+ .+.|++++|+|++ ++|++|+.|++|++|++.+. .....+.+|...|.+++|+|++ ++|++|+.||+|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g--~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG--QFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS--SEEEEEETTSEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC--CEEEEEeCCCcE
Confidence 4556 8999999999875 79999999999999998753 3456788999999999999999 799999999999
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee--ecccCCeeEEEEecCCC-CeE
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE--ESHVEDVTQVHFVPNNQ-NKV 183 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-~~l 183 (389)
++||+.+++.+..+.+|...|.+++|+|++..+++++.|+.|++||+.......... .+|...|.+++|+|++. ..+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 999999999999999999999999999999999999999999999986543332221 26888999999999862 379
Q ss_pred EEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCC
Q 016457 184 VSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDS 263 (389)
Q Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 263 (389)
++++.|+.|++||+++. .....+..|...|.+++|+ +++.+|++++.|+.|++||+.+++.+..+.
T Consensus 535 ~s~s~d~~v~vwd~~~~----~~~~~~~~h~~~v~~v~~s-pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~--------- 600 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNC----KLRSTLAGHTGYVSTVAVS-PDGSLCASGGKDGVVLLWDLAEGKKLYSLE--------- 600 (694)
T ss_dssp EEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSBCEEEETTTTEEEECCB---------
T ss_pred EEEeCCCeEEEEECCCC----cEEEEEcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEec---------
Confidence 99999999999999854 4566777899999999999 788999999999999999999998877665
Q ss_pred ccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEeccc-------------------ceeee
Q 016457 264 WTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGH-------------------TAVVR 324 (389)
Q Consensus 264 ~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h-------------------~~~v~ 324 (389)
+...+.+++|+|++. +|++++ ++.|++||+.+++. +..+. .+ ...+.
T Consensus 601 ----~~~~v~~~~~sp~~~--~l~~~~-~~~i~iwd~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (694)
T 3dm0_A 601 ----ANSVIHALCFSPNRY--WLCAAT-EHGIKIWDLESKSI------VEDLK-VDLKAEAEKADNSGPAATKRKVIYCT 666 (694)
T ss_dssp ----CSSCEEEEEECSSSS--EEEEEE-TTEEEEEETTTTEE------EEEEC-CCCC----------------CCCCEE
T ss_pred ----CCCcEEEEEEcCCCc--EEEEEc-CCCEEEEECCCCCC------hhhhc-cccccccccccccccccCCceeEEee
Confidence 346799999999987 666664 56699999998765 23332 11 11244
Q ss_pred eccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 325 SVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 325 ~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
++ +|+|+|++|+||+.||.|++|++.
T Consensus 667 ~l---------~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 667 SL---------NWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EE---------EECTTSSEEEEEETTSEEEEEEC-
T ss_pred eE---------EEcCCCCEEEEEcCCCeEEEEecc
Confidence 55 899999999999999999999985
No 39
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.4e-42 Score=302.84 Aligned_cols=266 Identities=18% Similarity=0.251 Sum_probs=233.6
Q ss_pred CCCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc------eeeeeecCCCC
Q 016457 11 QPKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG------QYSGECKGHSS 81 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------~~~~~~~~~~~ 81 (389)
....++++.|++|++||.. +....+.. ...|.+++|+|++.+|++|+.|+.+++|++... .....+.+|..
T Consensus 76 ~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~ 155 (354)
T 2pbi_B 76 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTN 155 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSS
T ss_pred CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCC
Confidence 3467899999999999975 34555555 788999999999999999999999999998643 34556778999
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCcee
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQV 159 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~ 159 (389)
.|.+++|+|++ ..|++++.|++|++||+++++.+..+.+|...|.+++|+|. +..+++++.||.|++||+++++.+
T Consensus 156 ~v~~~~~~~~~--~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~ 233 (354)
T 2pbi_B 156 YLSACSFTNSD--MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV 233 (354)
T ss_dssp CEEEEEECSSS--SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE
T ss_pred cEEEEEEeCCC--CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 99999999998 79999999999999999999999999999999999999874 578999999999999999999999
Q ss_pred eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee--ccCCceeeEEEecCCCcEEEEEecCC
Q 016457 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI--NVGTSVGKVGFFGETNKHLWCLTHIE 237 (389)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~d~ 237 (389)
..+. .|...|++++|+|++. .|++++.|+.|++||+++. ..+..+. .+...+.+++|+ +++.+|++++.|+
T Consensus 234 ~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~v~lwd~~~~----~~~~~~~~~~~~~~~~~~~~s-~~g~~l~~g~~d~ 306 (354)
T 2pbi_B 234 QAFE-THESDVNSVRYYPSGD-AFASGSDDATCRLYDLRAD----REVAIYSKESIIFGASSVDFS-LSGRLLFAGYNDY 306 (354)
T ss_dssp EEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT----EEEEEECCTTCCSCEEEEEEC-TTSSEEEEEETTS
T ss_pred EEec-CCCCCeEEEEEeCCCC-EEEEEeCCCeEEEEECCCC----cEEEEEcCCCcccceeEEEEe-CCCCEEEEEECCC
Confidence 9988 8999999999999995 9999999999999999854 2222222 223468899999 7889999999999
Q ss_pred cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 238 TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 238 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.||.|++|+
T Consensus 307 ~i~vwd~~~~~~~~~l~~------------h~~~v~~l~~spdg~--~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFG------------HENRVSTLRVSPDGT--AFCSGSWDHTLRVWA 354 (354)
T ss_dssp CEEEEETTTCSEEEEECC------------CSSCEEEEEECTTSS--CEEEEETTSEEEEEC
T ss_pred cEEEEECCCCceEEEEEC------------CCCcEEEEEECCCCC--EEEEEcCCCCEEecC
Confidence 999999999998888876 779999999999999 889999999999995
No 40
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.5e-43 Score=304.77 Aligned_cols=269 Identities=14% Similarity=0.133 Sum_probs=219.6
Q ss_pred CccccCC------CCeEEEEecCce------eeeee-cCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee----e
Q 016457 13 KSQSCDN------VNSIKRFGLKNS------IQTNF-GDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG----E 75 (389)
Q Consensus 13 ~~~s~~~------~~~i~~w~~~~~------~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~----~ 75 (389)
..++++. |+.|++|+.... ..... +...|.+++|+|++. +++++.||+|+|||+.+++... .
T Consensus 56 ~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~ 134 (357)
T 4g56_B 56 LLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFA 134 (357)
T ss_dssp EEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEE
T ss_pred EEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeec
Confidence 3556665 678999986431 12222 377899999999985 5567789999999998876543 3
Q ss_pred ecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECc
Q 016457 76 CKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWR 154 (389)
Q Consensus 76 ~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~ 154 (389)
..+|...|++++|+|++ ++|++|+.|++|++||+++++.+..+..|...|++++|+|++. .+++++.|+.|++||++
T Consensus 135 ~~~h~~~V~~v~~spdg--~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDG--TQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp ECCCSSCEEEEEECSSS--SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred cCCCCCCEEEEEECCCC--CEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 34799999999999999 7999999999999999999999999999999999999998875 57778889999999999
Q ss_pred CCceeeeee-ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEE
Q 016457 155 NKKQVACLE-ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCL 233 (389)
Q Consensus 155 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 233 (389)
+++++..+. ..+...+++++|+|++..+|++|+.|+.|++||++++ ..+..+..|...|.+++|+|+++.+|+++
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~----~~~~~~~~~~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP----DSAQTSAVHSQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG----GGCEEECCCSSCEEEEEECSSSSCCEEEE
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCC----cEeEEEeccceeEEEEEEcCCCCCEEEEE
Confidence 988776554 2466789999999987668999999999999999954 56677788999999999996666789999
Q ss_pred ecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC-CCCeEEEEEecCCceEEEEEeccC
Q 016457 234 THIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG-EGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 234 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+.|++|+|||+++++.+..+ + |...|.+++|+| ++. +|++|+.||.|++|++.+.
T Consensus 289 s~D~~i~iwd~~~~~~~~~~-~------------H~~~V~~vafsP~d~~--~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 289 SEDCTVAVLDADFSEVFRDL-S------------HRDFVTGVAWSPLDHS--KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ETTSCEEEECTTSCEEEEEC-C------------CSSCEEEEEECSSSTT--EEEEEETTSCEEEEECC--
T ss_pred eCCCEEEEEECCCCcEeEEC-C------------CCCCEEEEEEeCCCCC--EEEEEcCCCeEEEEECCCC
Confidence 99999999999998877655 2 779999999998 677 7899999999999999754
No 41
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.9e-43 Score=309.54 Aligned_cols=302 Identities=12% Similarity=0.105 Sum_probs=251.0
Q ss_pred eeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce------eeeeecCCCCcEEEEEEeCC----C---CCCEE
Q 016457 32 IQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ------YSGECKGHSSTVNQISFSGP----S---TPHVL 97 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~i~~~~~----~---~~~~l 97 (389)
...+.+ .+.|++++|+| ++|++|+.||.|++|++.+++ .+..+.+|...|.+++|+|+ + . +|
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~--~l 84 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC--LV 84 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE--EE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc--EE
Confidence 344555 88999999999 799999999999999999887 78888899999999999998 4 4 89
Q ss_pred EEEecCCeEEEEEccCCeE-----EEEEEcC-----CCCeEEEEEe----CCCCe-EEEeecCCeEEEEECcC------C
Q 016457 98 HSCSSDGTIRAWDTRSFHE-----VWSVTAG-----SQEIFCFSFG----GSTDY-LLAAGCGSQIQFWDWRN------K 156 (389)
Q Consensus 98 ~s~~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~iwd~~~------~ 156 (389)
++++.||.|++||+.+++. +..+..| ...|.+++|+ |++.. +++++.||.|++||+++ +
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998886 8888888 4899999999 99999 99999999999999998 6
Q ss_pred ceee-----eee------ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec---c---CCceee
Q 016457 157 KQVA-----CLE------ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN---V---GTSVGK 219 (389)
Q Consensus 157 ~~~~-----~~~------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~---~~~i~~ 219 (389)
+.+. .+. ..|...|.+++|+|++ .+++++.|+.|++||++++ ..+..+.. | ...|.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL----RPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT----EEEEEEECCC---CCCCCEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC----ceeEEEeccccccccCCccce
Confidence 6665 663 1488899999999988 9999999999999999953 45666666 7 889999
Q ss_pred EEEecCCCcEEEEEecC---CcEEEEEcCCCceeEEeecccccccC-CccCCCCCceeeecccCCCCeEEEEEecCCceE
Q 016457 220 VGFFGETNKHLWCLTHI---ETLSIWDWKDGQNVASFENARSLASD-SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTV 295 (389)
Q Consensus 220 ~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i 295 (389)
++|+ +++.+|++++.| +.|++||+.+++.+..+......... .....|...|.+++|+|+++ +|++++.||.|
T Consensus 239 i~~~-~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i 315 (397)
T 1sq9_A 239 VKFS-PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE--TLCSAGWDGKL 315 (397)
T ss_dssp EEEC-SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS--EEEEEETTSEE
T ss_pred EEEC-CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC--EEEEEeCCCeE
Confidence 9999 678899999999 99999999999988888751100000 00001558899999999999 89999999999
Q ss_pred EEEEeccCCccccCCCeEEEec-----cc---------------ceeeeeccCCCcccCCCCCCCc----------eeEE
Q 016457 296 GYFPVNYGGAATIGPPEAVLVG-----GH---------------TAVVRSVLPMPSVQGRPAQSHG----------IFGW 345 (389)
Q Consensus 296 ~i~~~~~~~~~~~~~~~~~~~~-----~h---------------~~~v~~~~~~~~~~~~~~s~~~----------~~l~ 345 (389)
++||+.+++. +..+.. +| ...|.++ +|+|++ ++|+
T Consensus 316 ~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~---------~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 316 RFWDVKTKER------ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV---------KFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp EEEETTTTEE------EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE---------EEECTTTSBSTTCTTSCEEE
T ss_pred EEEEcCCCce------eEEEecccCcccchhhhhccccccccccCCceeEE---------EeccccccccccccccceEE
Confidence 9999998765 455531 45 8889999 999998 7999
Q ss_pred EecCCCeEEEEeccCC
Q 016457 346 TGGEDGRLCCWLSDDS 361 (389)
Q Consensus 346 s~~~dg~v~iW~~~~~ 361 (389)
+|+.||.|++|+++.+
T Consensus 381 s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 381 CVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEETTTEEEEEEEEC-
T ss_pred EecCCCcEEEEEcCCC
Confidence 9999999999998753
No 42
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-42 Score=293.80 Aligned_cols=284 Identities=16% Similarity=0.210 Sum_probs=249.5
Q ss_pred ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEE
Q 016457 30 NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108 (389)
Q Consensus 30 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~i 108 (389)
+....+.+ .+.|++++| |++++|++|+.||.|++||+.+++....+..|...|.+++|+|++ .+|++++.||.|++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEK--ELLLFGGKDTMING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTT--TEEEEEETTSCEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCC--CEEEEecCCCeEEE
Confidence 35566777 899999999 999999999999999999999999999999999999999999998 79999999999999
Q ss_pred EEccCC---eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEec-CCCCeEE
Q 016457 109 WDTRSF---HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVP-NNQNKVV 184 (389)
Q Consensus 109 wd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~ 184 (389)
|++... +.+..+..|...|.+++| +++.+++++.|+.|++|| .++.+..+. .|...+.++.|.| ++ +.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~-~~~~~v~~~~~~~~~~-~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ-AHNASVWDAKVVSFSE-NKFL 159 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE-CCSSCEEEEEEEETTT-TEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc-cCCCceeEEEEccCCC-CEEE
Confidence 998754 667888899999999999 477999999999999999 667777777 8999999999999 66 5999
Q ss_pred EEeCCCcEEEEecCCCCCCCccceeeec-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCC
Q 016457 185 SASVDGLICTFDTGGDINDDDLLESVIN-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDS 263 (389)
Q Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 263 (389)
+++.|+.|++||.. .....+.. +...+.+++|+ +++. +++++.|+.|++||+++++.+..+..
T Consensus 160 ~~~~d~~i~i~d~~------~~~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~-------- 223 (313)
T 3odt_A 160 TASADKTIKLWQND------KVIKTFSGIHNDVVRHLAVV-DDGH-FISCSNDGLIKLVDMHTGDVLRTYEG-------- 223 (313)
T ss_dssp EEETTSCEEEEETT------EEEEEECSSCSSCEEEEEEE-ETTE-EEEEETTSEEEEEETTTCCEEEEEEC--------
T ss_pred EEECCCCEEEEecC------ceEEEEeccCcccEEEEEEc-CCCe-EEEccCCCeEEEEECCchhhhhhhhc--------
Confidence 99999999999955 34455555 88899999999 5666 99999999999999999999998886
Q ss_pred ccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCcee
Q 016457 264 WTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIF 343 (389)
Q Consensus 264 ~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~ 343 (389)
|...+.+++|+|++. |++++.||.|++||+.+++. +..+. .|...|.++ +|+|+++
T Consensus 224 ----~~~~i~~~~~~~~~~---l~~~~~dg~v~iwd~~~~~~------~~~~~-~~~~~i~~~---------~~~~~~~- 279 (313)
T 3odt_A 224 ----HESFVYCIKLLPNGD---IVSCGEDRTVRIWSKENGSL------KQVIT-LPAISIWSV---------DCMSNGD- 279 (313)
T ss_dssp ----CSSCEEEEEECTTSC---EEEEETTSEEEEECTTTCCE------EEEEE-CSSSCEEEE---------EECTTSC-
T ss_pred ----CCceEEEEEEecCCC---EEEEecCCEEEEEECCCCce------eEEEe-ccCceEEEE---------EEccCCC-
Confidence 669999999999983 57889999999999998876 56665 888999999 9999998
Q ss_pred EEEecCCCeEEEEeccCCc
Q 016457 344 GWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 344 l~s~~~dg~v~iW~~~~~~ 362 (389)
+++++.||.|++|+++...
T Consensus 280 ~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEEEETTSCEEEEESCGGG
T ss_pred EEEEeCCCcEEEEeCCCCc
Confidence 5678889999999998653
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-42 Score=298.42 Aligned_cols=282 Identities=13% Similarity=0.180 Sum_probs=228.4
Q ss_pred CCCccccCCCCeEEEEecCce----eeee-ec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc--eeeeeecCCCCc
Q 016457 11 QPKSQSCDNVNSIKRFGLKNS----IQTN-FG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG--QYSGECKGHSST 82 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~~~----~~~~-~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~ 82 (389)
....++++.|++|++|++... ...+ .+ ...|.+++|+|++++|++|+.|++|++|++.++ +.+..+.+|...
T Consensus 28 g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~ 107 (345)
T 3fm0_A 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENE 107 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSC
T ss_pred CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCC
Confidence 346889999999999998642 1222 34 789999999999999999999999999998766 457788999999
Q ss_pred EEEEEEeCCCCCCEEEEEecCCeEEEEEccCC---eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc--
Q 016457 83 VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF---HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK-- 157 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-- 157 (389)
|.+++|+|++ ++|++|+.|++|++||+.++ ..+..+..|...|.+++|+|++..+++++.|+.|++||+++++
T Consensus 108 v~~v~~sp~~--~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 108 VKSVAWAPSG--NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEEEEECTTS--SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred ceEEEEeCCC--CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 9999999999 79999999999999999865 4566788899999999999999999999999999999998775
Q ss_pred eeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCC-----------ccceeeec-cCCceeeEEEecC
Q 016457 158 QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDD-----------DLLESVIN-VGTSVGKVGFFGE 225 (389)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-----------~~~~~~~~-~~~~i~~~~~~~~ 225 (389)
....+. +|...|++++|+|++. +|++++.|+.|++||........ ..+..+.. |...|.+++|+ +
T Consensus 186 ~~~~~~-~h~~~v~~l~~sp~g~-~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~-~ 262 (345)
T 3fm0_A 186 CCATLE-GHESTVWSLAFDPSGQ-RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC-Q 262 (345)
T ss_dssp EEEEEC-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC-T
T ss_pred EEEEec-CCCCceEEEEECCCCC-EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe-c
Confidence 346676 8999999999999995 99999999999999975322111 11222222 77889999999 6
Q ss_pred CCcEEEEEecCCcEEEEEcCCCce----eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 226 TNKHLWCLTHIETLSIWDWKDGQN----VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 226 ~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++..|++++.|+.|++|+...... ...+..+. ...|...|.+++|+|++.. +|++|+.||.|++|++.
T Consensus 263 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~-------~~~h~~~V~~v~~~p~~~~-~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 263 LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHL-------HQAHSQDVNCVAWNPKEPG-LLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEE-------TTSSSSCEEEEEECSSSTT-EEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeee-------cccccCcEeEeEEeCCCce-EEEEcCCCCcEEEEEec
Confidence 778899999999999999875421 11111100 0127899999999998743 68999999999999998
Q ss_pred cCCc
Q 016457 302 YGGA 305 (389)
Q Consensus 302 ~~~~ 305 (389)
+++.
T Consensus 335 ~~~~ 338 (345)
T 3fm0_A 335 RPEG 338 (345)
T ss_dssp C---
T ss_pred CCCC
Confidence 8664
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-41 Score=292.09 Aligned_cols=269 Identities=17% Similarity=0.228 Sum_probs=238.1
Q ss_pred CCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEE
Q 016457 12 PKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~ 88 (389)
...++++.|+.|++|+.. +....+.+ ...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~ 115 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 115 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 357889999999999985 45566666 889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccC
Q 016457 89 SGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168 (389)
Q Consensus 89 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (389)
+|++ ++|++|+.|+.|++||+++++.+..+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+...+..
T Consensus 116 ~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 193 (312)
T 4ery_A 116 NPQS--NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 193 (312)
T ss_dssp CSSS--SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC
T ss_pred cCCC--CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC
Confidence 9998 79999999999999999999999999999999999999999999999999999999999999888777646777
Q ss_pred CeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCce--eeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 169 DVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSV--GKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
.+.+++|+|+++ +|++++.|+.|++||++++ ..+..+..|.... ....++++++.+|++++.|+.|++||+.+
T Consensus 194 ~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 194 PVSFVKFSPNGK-YILAATLDNTLKLWDYSKG----KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp CEEEEEECTTSS-EEEEEETTTEEEEEETTTT----EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTT
T ss_pred ceEEEEECCCCC-EEEEEcCCCeEEEEECCCC----cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCC
Confidence 899999999996 9999999999999999854 3455555555443 33456657788999999999999999999
Q ss_pred CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec--CCceEEEEEec
Q 016457 247 GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT--GAGTVGYFPVN 301 (389)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~--~dg~i~i~~~~ 301 (389)
++.+..+.+ |...|.+++|+|+++ ++++++ .|+.|++|+.+
T Consensus 269 ~~~~~~~~~------------h~~~v~~~~~~p~~~--~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 269 KEIVQKLQG------------HTDVVISTACHPTEN--IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CCEEEEECC------------CSSCEEEEEECSSSS--EEEEEECTTTCCEEEEECC
T ss_pred chhhhhhhc------------cCCcEEEEeecCcCC--ceEEEEccCCccEEEecCC
Confidence 999988887 779999999999998 777775 69999999864
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-41 Score=303.07 Aligned_cols=302 Identities=20% Similarity=0.302 Sum_probs=267.0
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
..++++.|+.|++|++. +.+..+.+ .+.|.+++|+ +++|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 131 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 208 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH 208 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred EEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec
Confidence 46788999999999985 56677777 8899999998 5699999999999999999999999999999999999996
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+ +.+++|+.||+|++||+.+++.+..+..|...|.++++ ++..+++++.||.|++||+++++.+..+. +|...
T Consensus 209 --~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~ 281 (445)
T 2ovr_B 209 --E--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNR 281 (445)
T ss_dssp --T--TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEEC-CCSSC
T ss_pred --C--CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEec-CCCCc
Confidence 3 48999999999999999999999999999999999999 67889999999999999999999999998 89999
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
|.++.| ++ ..+++++.|+.|++||++++ ..+..+..|...+.++.+. +.++++++.||.|++||+.+++.
T Consensus 282 v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 282 VYSLQF--DG-IHVVSGSLDTSIRVWDVETG----NCIHTLTGHQSLTSGMELK---DNILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp EEEEEE--CS-SEEEEEETTSCEEEEETTTC----CEEEEECCCCSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEE--CC-CEEEEEeCCCeEEEEECCCC----CEEEEEcCCcccEEEEEEe---CCEEEEEeCCCeEEEEECCCCcE
Confidence 999999 55 49999999999999999954 4566777888888888875 45899999999999999999999
Q ss_pred eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe----cccceeeee
Q 016457 250 VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV----GGHTAVVRS 325 (389)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~----~~h~~~v~~ 325 (389)
+..+.... .|...|.+++|++ + +|++|+.||.|++||+.+++. +..+. .+|...|.+
T Consensus 352 ~~~~~~~~---------~~~~~v~~~~~~~--~--~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~~~~v~~ 412 (445)
T 2ovr_B 352 LQTLQGPN---------KHQSAVTCLQFNK--N--FVITSSDDGTVKLWDLKTGEF------IRNLVTLESGGSGGVVWR 412 (445)
T ss_dssp EEEECSTT---------SCSSCEEEEEECS--S--EEEEEETTSEEEEEETTTCCE------EEEEEECTTGGGTCEEEE
T ss_pred EEEEccCC---------CCCCCEEEEEECC--C--EEEEEeCCCeEEEEECCCCce------eeeeeccccCCCCceEEE
Confidence 88887532 2668899999964 5 889999999999999998876 55552 367889999
Q ss_pred ccCCCcccCCCCCCCceeEEEecCCCe----EEEEeccCC
Q 016457 326 VLPMPSVQGRPAQSHGIFGWTGGEDGR----LCCWLSDDS 361 (389)
Q Consensus 326 ~~~~~~~~~~~~s~~~~~l~s~~~dg~----v~iW~~~~~ 361 (389)
+ +|+|++.+|++|+.||+ |.+||++..
T Consensus 413 ~---------~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 413 I---------RASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp E---------EECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred E---------EecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 9 99999999999999998 999999854
No 46
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.9e-42 Score=297.15 Aligned_cols=279 Identities=14% Similarity=0.250 Sum_probs=225.9
Q ss_pred CCCCccccCCCCeEEEEecCc---------eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCC
Q 016457 10 SQPKSQSCDNVNSIKRFGLKN---------SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGH 79 (389)
Q Consensus 10 ~~~~~~s~~~~~~i~~w~~~~---------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 79 (389)
+.+..++++.|++|++|++.. +...+.+ ...|.+++|+|++.+|++|+.|++|++||+.+++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 445688999999999999852 3455666 889999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEE---cCCCCeEEEEEeCCC----------CeEEEeecCC
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVT---AGSQEIFCFSFGGST----------DYLLAAGCGS 146 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~d~ 146 (389)
...|.+++|+|++ .+|++++.|++|++||+.. ....... .|...|.+++|+|.+ ..+++++.|+
T Consensus 118 ~~~v~~v~~sp~~--~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 194 (343)
T 2xzm_R 118 QSEVYSVAFSPDN--RQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG 194 (343)
T ss_dssp CSCEEEEEECSST--TEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS
T ss_pred CCcEEEEEECCCC--CEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC
Confidence 9999999999999 7999999999999999974 3333333 578899999999876 6788899999
Q ss_pred eEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 147 QIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
.|++|| ...+....+. +|...|.+++|+|++. +|++|+.|+.|++||++... .......+...|.+++|+ ++
T Consensus 195 ~i~iwd-~~~~~~~~~~-~h~~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~~----~~~~~~~~~~~v~~v~~s-p~ 266 (343)
T 2xzm_R 195 RLKVWN-TNFQIRYTFK-AHESNVNHLSISPNGK-YIATGGKDKKLLIWDILNLT----YPQREFDAGSTINQIAFN-PK 266 (343)
T ss_dssp EEEEEE-TTTEEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTCEEEEEESSCCS----SCSEEEECSSCEEEEEEC-SS
T ss_pred EEEEEc-CCCceeEEEc-CccccceEEEECCCCC-EEEEEcCCCeEEEEECCCCc----ccceeecCCCcEEEEEEC-CC
Confidence 999999 4456667777 8999999999999996 99999999999999996321 122233456679999999 66
Q ss_pred CcEEEEEecCCcEEEEEcCCCceeE--EeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 227 NKHLWCLTHIETLSIWDWKDGQNVA--SFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 227 ~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+.+++ ++.|+.|++||+.+++... .+.... .....-..+|...+.+++|+|+|+ +|++|+.||.|++|++.++
T Consensus 267 ~~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~sp~g~--~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 267 LQWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEP-ITKAEGQKGKNPQCTSLAWNALGK--KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SCEEE-EEESSCEEEEESSSCCSCSEEECCCCS-GGGBTTBCCSCCCEEEEEECSSSC--CEEEEETTSEEEEEEEEEE
T ss_pred CCEEE-EECCCCEEEEEeCCCCCCceEEeecCc-chhhhhhcCCCCceEEEEECCCCC--eEEEecCCceEEEEEEEcc
Confidence 76665 5568889999998776543 333110 000000113778899999999999 8899999999999999764
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-43 Score=319.93 Aligned_cols=311 Identities=9% Similarity=0.041 Sum_probs=230.9
Q ss_pred CccccCCCCeEEEEecCc--e----eeeeec-CcceEEEeecCC------CCeEEEEecCCeEEEEeCCCcee-------
Q 016457 13 KSQSCDNVNSIKRFGLKN--S----IQTNFG-DDYVFEIVPKND------WSLMAVSLSTNVVKLYSPVTGQY------- 72 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~--~----~~~~~~-~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~~~~------- 72 (389)
..++++.|++|++|++.. . ..++.+ .+.|.+++|+|+ +.+||+|+.||+|+|||+.+++.
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 458899999999999852 2 133445 688999999997 57999999999999999986642
Q ss_pred ----eeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe-EEEEEEcCCCCeEEE--EEeCCC-CeEEEeec
Q 016457 73 ----SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH-EVWSVTAGSQEIFCF--SFGGST-DYLLAAGC 144 (389)
Q Consensus 73 ----~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~ 144 (389)
...+.+|...|++++|++++ .|++|+.||+|++||++++. +...+..|...|.++ +|+|++ ..|++++.
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~~---~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSPT---TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSSS---EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred ecCceEEEEcCCCCEEEEEecCCC---eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 23677899999999999754 89999999999999999763 456788999999999 567666 67888889
Q ss_pred CCeEEEEECcCCceeeeeeecccC--CeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEE
Q 016457 145 GSQIQFWDWRNKKQVACLEESHVE--DVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGF 222 (389)
Q Consensus 145 d~~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (389)
|++|++||+++++.+..+. +|.. .|.+++|+|++. .+++++.|+.|++||++++ ..+..+.+|...|.+++|
T Consensus 332 D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~----~~~~~l~gH~~~V~sva~ 405 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA----FAVHPLVSRETTITAIGV 405 (524)
T ss_dssp TSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCT----TCCEEEEECSSCEEEEEC
T ss_pred CCeEEEEECCCCCcccccc-cccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccc----ccceeeecCCCceEEEEe
Confidence 9999999999988877776 5653 588999999986 8999999999999999954 345667789999999999
Q ss_pred ecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 223 FGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 223 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
+ +++.+|++|+.|++|++||+... .+..+.... .| .+...+.+++|+|+++ .+ ....+..+..|+. +
T Consensus 406 S-p~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~-----~~--~~~~~v~~v~~sp~g~--~~-~~~~~~~~~~~~~-~ 472 (524)
T 2j04_B 406 S-RLHPMVLAGSADGSLIITNAARR-LLHGIKNSS-----AT--QKSLRLWKWDYSIKDD--KY-RIDSSYEVYPLTV-N 472 (524)
T ss_dssp C-SSCCBCEEEETTTEEECCBSCSS-TTTCC-------------CCCCEEEECBCCSSSC--EE-EECCCCCCCC-----
T ss_pred C-CCCCeEEEEECCCEEEEEechHh-hccccccCc-----cc--eeeeEEEEeccCCCCC--eE-EccCCceeccccc-C
Confidence 9 78889999999999999998643 221111000 00 0223578999999998 33 2222222322332 2
Q ss_pred CCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCce---eEEEecCCCeEEEEeccCC
Q 016457 303 GGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI---FGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 303 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~---~l~s~~~dg~v~iW~~~~~ 361 (389)
+.. +..+. +|...|.+| +|+|++. +||+|+.||.||||+++..
T Consensus 473 g~~------~~~l~-gh~~~V~~V---------afsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 473 DVS------KAKID-AHGINITCT---------KWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp ----------------CCCSCCCE---------EECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred Ccc------eeeec-CCCceEEEE---------ECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 222 45665 899999999 9999964 9999999999999998754
No 48
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.4e-43 Score=304.81 Aligned_cols=297 Identities=15% Similarity=0.138 Sum_probs=240.4
Q ss_pred CcceEEEeecCCCCeE-EEEec---CCeEEEEeCCCceeeeee-cCCCCcEEEEEEeCC---CCCCEEEEEecCCeEEEE
Q 016457 38 DDYVFEIVPKNDWSLM-AVSLS---TNVVKLYSPVTGQYSGEC-KGHSSTVNQISFSGP---STPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l-~~~~~---d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~~~~---~~~~~l~s~~~dg~i~iw 109 (389)
.+.|++++|+|++..+ ++|+. |+.|++||+.+++..... .+|...|.+++|+|+ + .+|++|+.||.|++|
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQ--RYLATGDFGGNLHIW 95 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTT--CCEEEEETTSCEEEE
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCC--ceEEEecCCCeEEEE
Confidence 8899999999999654 56655 899999999988765443 369999999999998 5 699999999999999
Q ss_pred EccCCe-EEEEEEcCCCCeEEEEE------eCCCCeEEEeecCCeEEEEECcCCc-eeeeeeecccC----CeeEEE---
Q 016457 110 DTRSFH-EVWSVTAGSQEIFCFSF------GGSTDYLLAAGCGSQIQFWDWRNKK-QVACLEESHVE----DVTQVH--- 174 (389)
Q Consensus 110 d~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~----~v~~~~--- 174 (389)
|+.+++ .+..+..|...|.+++| +|++..+++++.|+.|++||+++++ .+..+. .|.. .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME-PVQGENKRDCWTVAFGN 174 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC-CCTTSCCCCEEEEEEEC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc-ccCCCCCCceEEEEEEe
Confidence 999888 88899999999999955 6788899999999999999999887 666665 4443 789998
Q ss_pred -EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecC--CCcEEEEEecCCcEEEEEcCCCceeE
Q 016457 175 -FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE--TNKHLWCLTHIETLSIWDWKDGQNVA 251 (389)
Q Consensus 175 -~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~ 251 (389)
|+|++. ++++++.|+.|++||++++. ......+...|.+++|+|. ++.+|++++.|+.|++||+++++...
T Consensus 175 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 175 AYNQEER-VVCAGYDNGDIKLFDLRNMA-----LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp CCC-CCC-EEEEEETTSEEEEEETTTTE-----EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred ccCCCCC-EEEEEccCCeEEEEECccCc-----eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 678885 99999999999999999642 3445678899999999942 78899999999999999998776554
Q ss_pred EeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCcccc-------------CCCeEEEecc
Q 016457 252 SFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATI-------------GPPEAVLVGG 318 (389)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~-------------~~~~~~~~~~ 318 (389)
.+..... ..|...|.+++|+|+++. +|++|+.||.|++||+..+..... ..++..+. +
T Consensus 249 ~~~~~~~-------~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 319 (357)
T 3i2n_A 249 GFASVSE-------KAHKSTVWQVRHLPQNRE-LFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT-L 319 (357)
T ss_dssp EEEEEEE-------ECCSSCEEEEEEETTEEE-EEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE-C
T ss_pred ceeeecc-------CCCcCCEEEEEECCCCCc-EEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc-c
Confidence 4431000 017799999999998764 578999999999999987653110 01345555 8
Q ss_pred cceeeeeccCCCcccCCCCCCCceeEE-EecCCCeEEEEeccCC
Q 016457 319 HTAVVRSVLPMPSVQGRPAQSHGIFGW-TGGEDGRLCCWLSDDS 361 (389)
Q Consensus 319 h~~~v~~~~~~~~~~~~~~s~~~~~l~-s~~~dg~v~iW~~~~~ 361 (389)
|...|.++ +|+|++++|+ +++.||.|++|++...
T Consensus 320 ~~~~v~~~---------~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 320 STQPISSL---------DWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CSSCEEEE---------EECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCCeeEE---------EEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 89999999 9999999998 8999999999999753
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-44 Score=316.12 Aligned_cols=244 Identities=13% Similarity=0.128 Sum_probs=202.8
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc--eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG--QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH 115 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 115 (389)
.+.|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++ ++|++++.|++|++||+.+++
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS--NRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT--CCEEEEETTSSEEEC------
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC--CEEEEEeCCCeEEEEEcCCCC
Confidence 678999999999999999999999999999988 7888999999999999999998 799999999999999999877
Q ss_pred ---EEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc---eeeeeeecccCCeeEEEEecCCCCeEEEEeCC
Q 016457 116 ---EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK---QVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189 (389)
Q Consensus 116 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 189 (389)
....+..|...|.+++|+|++..+++++.|+.|++||+++++ ....+...|...|++++|+|++. +|++++.|
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~d 167 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LLAAGCAD 167 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EEEEEESS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EEEEEeCC
Confidence 677778899999999999999999999999999999999887 36667623999999999999995 99999999
Q ss_pred CcEEEEecCCCCC--------------CCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce----eE
Q 016457 190 GLICTFDTGGDIN--------------DDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN----VA 251 (389)
Q Consensus 190 ~~i~i~d~~~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~ 251 (389)
+.|++||++.... ....+..+ .|...|.+++|+ +++++|++++.|+.|++||+.+++. +.
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s-p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS-PSGNALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC-TTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC-CCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 9999999964321 11223333 788999999999 7888999999999999999999877 55
Q ss_pred EeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 252 SFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
.+.. |...+.+++|+|+++ +|++|+.++.+ +|+..
T Consensus 246 ~~~~------------~~~~v~~~~~s~~~~--~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 246 TVKL------------SQLPLRSLLWANESA--IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEC------------SSSCEEEEEEEETTE--EEEEESSSSEE-EECCC
T ss_pred eecC------------CCCceEEEEEcCCCC--EEEEEcCCcEE-EEEeC
Confidence 5555 678999999999998 88888777655 66654
No 50
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-41 Score=302.32 Aligned_cols=282 Identities=15% Similarity=0.197 Sum_probs=242.2
Q ss_pred ceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecC-CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 40 YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG-HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
.+.+++|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|++ .+|++|+.||.|++||+.+++.+.
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 170 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDG--SFLSVGLGNGLVDIYDVESQTKLR 170 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC--CEEEEECCCCeEEEEECcCCeEEE
Confidence 355577765 4577788899999999999988877765 88999999999998 799999999999999999999999
Q ss_pred EEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECc-CCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEec
Q 016457 119 SVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR-NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT 197 (389)
Q Consensus 119 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 197 (389)
.+..|...|.+++|+ +..+++++.||.|++||++ ....+..+. +|...|.+++|+|++. +|++++.|+.|++||+
T Consensus 171 ~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~ 246 (401)
T 4aez_A 171 TMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGL-QLASGGNDNVVQIWDA 246 (401)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSCEEEEET
T ss_pred EecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCC-EEEEEeCCCeEEEccC
Confidence 999999999999995 5789999999999999999 456677776 8999999999999985 9999999999999999
Q ss_pred CCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe--cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeee
Q 016457 198 GGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT--HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDC 275 (389)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 275 (389)
+++ .....+..|...|.+++|+|.+..++++++ .|+.|++||+.+++.+..+. +...+.++
T Consensus 247 ~~~----~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-------------~~~~v~~~ 309 (401)
T 4aez_A 247 RSS----IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-------------AGSQVTSL 309 (401)
T ss_dssp TCS----SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-------------CSSCEEEE
T ss_pred CCC----CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-------------CCCcEEEE
Confidence 953 455667788999999999965667777766 79999999999999888876 44789999
Q ss_pred cccCCCCeEEEEE--ecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeE
Q 016457 276 HYPGEGENLWVIG--GTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRL 353 (389)
Q Consensus 276 ~~~~~~~~~~l~~--g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v 353 (389)
+|+|+++ ++++ |+.||.|++|++.+++. .....+. +|...|.++ +|+|++++|++++.||.|
T Consensus 310 ~~s~~~~--~l~~~~g~~dg~i~v~~~~~~~~----~~~~~~~-~h~~~v~~~---------~~s~dg~~l~s~~~dg~i 373 (401)
T 4aez_A 310 IWSPHSK--EIMSTHGFPDNNLSIWSYSSSGL----TKQVDIP-AHDTRVLYS---------ALSPDGRILSTAASDENL 373 (401)
T ss_dssp EECSSSS--EEEEEECTTTCEEEEEEEETTEE----EEEEEEE-CCSSCCCEE---------EECTTSSEEEEECTTSEE
T ss_pred EECCCCC--eEEEEeecCCCcEEEEecCCccc----eeEEEec-CCCCCEEEE---------EECCCCCEEEEEeCCCcE
Confidence 9999999 5566 66999999999998654 1123344 899999999 999999999999999999
Q ss_pred EEEeccCCc
Q 016457 354 CCWLSDDSS 362 (389)
Q Consensus 354 ~iW~~~~~~ 362 (389)
++|++....
T Consensus 374 ~iw~~~~~~ 382 (401)
T 4aez_A 374 KFWRVYDGD 382 (401)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCc
Confidence 999998763
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-42 Score=305.99 Aligned_cols=276 Identities=14% Similarity=0.186 Sum_probs=233.7
Q ss_pred CCCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce-------eeeeecCCC
Q 016457 11 QPKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ-------YSGECKGHS 80 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-------~~~~~~~~~ 80 (389)
....++++.|++|++||.. +....+.. ...|.+++|+|++++|++|+.|+.|++|++.+.. ....+.+|.
T Consensus 78 ~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~ 157 (380)
T 3iz6_a 78 KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK 157 (380)
T ss_dssp SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCS
T ss_pred CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCC
Confidence 3468899999999999985 45666666 7889999999999999999999999999986532 345678999
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEE-----EcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECc
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV-----TAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWR 154 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~ 154 (389)
+.|.++.|.|++. ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|++ ++..+++++.|+.|++||++
T Consensus 158 ~~v~~~~~~~~~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 158 GYASSCQYVPDQE-TRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp SCCCCCBCCSSSS-SCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred cceEEEEEecCCC-CEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECC
Confidence 9999999999763 57999999999999999999998888 56888999999987 56778888889999999998
Q ss_pred -CCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec-------cCCceeeEEEecCC
Q 016457 155 -NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN-------VGTSVGKVGFFGET 226 (389)
Q Consensus 155 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~ 226 (389)
..+.+..+. +|...|++++|+|++. +|++|+.|+.|++||++++. .+..+.. +...|.+++|+ ++
T Consensus 237 ~~~~~~~~~~-~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s-~~ 309 (380)
T 3iz6_a 237 ITSRAVRTYH-GHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH----QLQVYNREPDRNDNELPIVTSVAFS-IS 309 (380)
T ss_dssp TTCCCCEEEC-CCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE----EEEEECCCCSSSCCSSCSCSEEEEC-SS
T ss_pred CCCcceEEEC-CcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc----EEEEecccccccccccCceEEEEEC-CC
Confidence 456777777 8999999999999995 99999999999999999652 2222222 22358899999 78
Q ss_pred CcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 227 NKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 227 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
+.+|++++.||.|++||+..++.+..+.... .+|...|.+++|+|+|+ +|++|+.||.|++|++...+
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~--------~~h~~~v~~l~~s~dg~--~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQ--------NSHEGRISCLGLSSDGS--ALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSC--------SSCCCCCCEEEECSSSS--EEEEECTTSCEEEEECCSSS
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEeccc--------CCCCCceEEEEECCCCC--EEEEeeCCCCEEEEecCCCc
Confidence 8999999999999999999988887764211 12789999999999999 89999999999999998654
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-43 Score=313.20 Aligned_cols=287 Identities=10% Similarity=0.140 Sum_probs=245.3
Q ss_pred CcceEEEeecCCCC-eEEEE----------ecCCeEEEEeCCCce---eeeeecCCCCcEEEEEEeCCCCCCEEEEEecC
Q 016457 38 DDYVFEIVPKNDWS-LMAVS----------LSTNVVKLYSPVTGQ---YSGECKGHSSTVNQISFSGPSTPHVLHSCSSD 103 (389)
Q Consensus 38 ~~~v~~~~~~~~~~-~l~~~----------~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d 103 (389)
...|.+++|+|+++ +|++| +.|+.|+|||+.+++ .+..+ .|...|.+++|+|++ .+|++++.|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~--~~l~~~~~d 88 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNN--KIIAGALDN 88 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSS--SCEEEEESS
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCC--CeEEEEccC
Confidence 35688999999987 99999 889999999999875 34444 488999999999999 799999999
Q ss_pred CeEEEEEccC----CeEEEEEEcCCCCeEEEEEeCC-CCeEEEeecCCeEEEEECcCCc------eeeee---eecccCC
Q 016457 104 GTIRAWDTRS----FHEVWSVTAGSQEIFCFSFGGS-TDYLLAAGCGSQIQFWDWRNKK------QVACL---EESHVED 169 (389)
Q Consensus 104 g~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~------~~~~~---~~~~~~~ 169 (389)
|.|++||+.+ .+.+..+..|...|.+++|+|+ +..+++++.|+.|++||+++++ ....+ . .|...
T Consensus 89 g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~ 167 (416)
T 2pm9_A 89 GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDE 167 (416)
T ss_dssp SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCC
T ss_pred CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc-CCCCC
Confidence 9999999987 4588888999999999999998 7888888899999999999876 33332 3 68899
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc------CCceeeEEEecCCCcEEEEEecCC---cEE
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV------GTSVGKVGFFGETNKHLWCLTHIE---TLS 240 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~l~~~~~d~---~i~ 240 (389)
|.+++|+|++..+|++++.|+.|++||++++ ..+..+..+ ...+.+++|+|.+..++++++.|+ .|+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAK----KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTT----EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCC----CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 9999999995469999999999999999954 334444444 788999999955457999999998 999
Q ss_pred EEEcCCC-ceeEEee-cccccccCCccCCCCCceeeecccC-CCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec
Q 016457 241 IWDWKDG-QNVASFE-NARSLASDSWTLDDVDYFVDCHYPG-EGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG 317 (389)
Q Consensus 241 i~d~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 317 (389)
+||++++ ..+..+. . |...+.+++|+| +++ +|++++.||.|++||+.+++. +..+.
T Consensus 244 ~~d~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~--~l~s~~~dg~v~~wd~~~~~~------~~~~~- 302 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQG------------HQKGILSLDWCHQDEH--LLLSSGRDNTVLLWNPESAEQ------LSQFP- 302 (416)
T ss_dssp EEETTSTTSCSBCCCSC------------CSSCEEEEEECSSCSS--CEEEEESSSEEEEECSSSCCE------EEEEE-
T ss_pred EEeCCCCCCCcEEeecC------------ccCceeEEEeCCCCCC--eEEEEeCCCCEEEeeCCCCcc------ceeec-
Confidence 9999986 4555554 4 678999999999 777 889999999999999998776 66675
Q ss_pred ccceeeeeccCCCcccCCCCCCCc-eeEEEecCCCeEEEEeccCCc
Q 016457 318 GHTAVVRSVLPMPSVQGRPAQSHG-IFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 318 ~h~~~v~~~~~~~~~~~~~~s~~~-~~l~s~~~dg~v~iW~~~~~~ 362 (389)
+|...|.++ +|+|++ .+|++++.||.|++|++....
T Consensus 303 ~~~~~v~~~---------~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 303 ARGNWCFKT---------KFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSSCCCCE---------EECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCCceEEE---------EECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 899999999 999999 899999999999999998763
No 53
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-41 Score=294.45 Aligned_cols=270 Identities=17% Similarity=0.181 Sum_probs=215.9
Q ss_pred CccccCCCCeEEEEecCc----eeeee-e--cCcceEEEeecCCCCeEEEEecCCeEEEEeCCC-------ceeeeeecC
Q 016457 13 KSQSCDNVNSIKRFGLKN----SIQTN-F--GDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT-------GQYSGECKG 78 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~----~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-------~~~~~~~~~ 78 (389)
..++++.|++|++|++.. ....+ . +...|.+++|+|++++|++|+.|++|+|||+.. .+.+..+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC
Confidence 678999999999999863 33344 2 267899999999999999999999999999853 356677889
Q ss_pred CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC----CeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECc
Q 016457 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS----FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR 154 (389)
Q Consensus 79 ~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 154 (389)
|...|.+++|+|++ ++|++|+.|++|++||++. .+++..+..|...|.+++|+|++..|++++.|+.|++||.+
T Consensus 106 h~~~V~~v~~sp~g--~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 106 HENEVKGVAWSNDG--YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp ---CEEEEEECTTS--CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEECCCC--CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999998 7999999999999999943 35678889999999999999999999999999999999998
Q ss_pred CC--ceeeeeeecccCCeeEEEEecC--CCCeEEEEeCCCcEEEEecCCCCCCC----ccceeeec-cCCceeeEEEecC
Q 016457 155 NK--KQVACLEESHVEDVTQVHFVPN--NQNKVVSASVDGLICTFDTGGDINDD----DLLESVIN-VGTSVGKVGFFGE 225 (389)
Q Consensus 155 ~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~-~~~~i~~~~~~~~ 225 (389)
++ +++..+. +|...|.+++|+|+ + ..|++++.|+.|++||++++.... .....+.. |...|.+++|+ +
T Consensus 184 ~~~~~~~~~~~-~h~~~v~~~~~~~~~~~-~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s-~ 260 (330)
T 2hes_X 184 DDDWECVAVLN-GHEGTVWSSDFDKTEGV-FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG-F 260 (330)
T ss_dssp TTEEEEEEEEC-CCSSCEEEEEECCSSSS-CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC-T
T ss_pred CCCeeEEEEcc-CCCCcEEEEEecCCCCe-eEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEc-C
Confidence 76 5677787 89999999999998 5 389999999999999997432111 11222333 78899999998 4
Q ss_pred CCcEEEEEecCCcEEEEEcCCCc--eeEEe-ecccccccCCccCCCCC-ceeeecccC--CCCeEEEEEecCCceEEEEE
Q 016457 226 TNKHLWCLTHIETLSIWDWKDGQ--NVASF-ENARSLASDSWTLDDVD-YFVDCHYPG--EGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 226 ~~~~l~~~~~d~~i~i~d~~~~~--~~~~~-~~~~~~~~~~~~~~~~~-~i~~~~~~~--~~~~~~l~~g~~dg~i~i~~ 299 (389)
++ +|++++.|+.|++||..+++ ..... .. |.. .|.+++|+| +++ +|++|+.||.|++|+
T Consensus 261 ~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~------------h~~~~v~~v~~~~~~~~~--~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 261 NG-LIASVGADGVLAVYEEVDGEWKVFAKRALC------------HGVYEINVVKWLELNGKT--ILATGGDDGIVNFWS 325 (330)
T ss_dssp TS-CEEEEETTSCEEEEEEETTEEEEEEEESCT------------TTTSCEEEEEEC-----C--CEEEEETTSEEEEEE
T ss_pred CC-EEEEEeCCCEEEEEEcCCCceEEEeccccc------------cccceEEEEEEecCCCce--EEEEecCCCcEEEEE
Confidence 44 79999999999999998764 22222 22 555 899999999 566 789999999999999
Q ss_pred ecc
Q 016457 300 VNY 302 (389)
Q Consensus 300 ~~~ 302 (389)
+..
T Consensus 326 ~~~ 328 (330)
T 2hes_X 326 LEK 328 (330)
T ss_dssp C--
T ss_pred ecc
Confidence 864
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-42 Score=309.40 Aligned_cols=286 Identities=14% Similarity=0.100 Sum_probs=242.4
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
..+++++|+|++++|++|+.|+.|++||+.+++....+..| ..+....|++++ ++|++|+.||.|++||+.+++...
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQM--RRFILGTTEGDIKVLDSNFNLQRE 133 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSS--CEEEEEETTSCEEEECTTSCEEEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCC--CEEEEEECCCCEEEEeCCCcceee
Confidence 44568999999999999999999999999998887777766 455556788888 799999999999999999999988
Q ss_pred EEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 119 SVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 119 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.+..|...|++++|+|++..+++++.|+.|++||+++++.+..+. +|...|.+++|+|++. +|++++.|+.|++||++
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-GHRATVTDIAIIDRGR-NVLSASLDGTIRLWECG 211 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETT
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-CCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECC
Confidence 888999999999999999999999999999999999999999998 8999999999999995 99999999999999999
Q ss_pred CCCCCCccceeeec---cC---------------------CceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 199 GDINDDDLLESVIN---VG---------------------TSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 199 ~~~~~~~~~~~~~~---~~---------------------~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
++ ..+..+.. +. ..+.+++|+ +++.+|++++.||.|++||+++++.+..+.
T Consensus 212 ~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 212 TG----TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG-TYGKYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp TT----EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS-CTTEEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CC----ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc-CCCCEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 54 23333332 23 344455556 678899999999999999999998877765
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccC
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQG 334 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 334 (389)
.. |...+.+++|+|+++. +|++|+.||.|++||+.+++. ++..+...|...|.++
T Consensus 287 ~~-----------~~~~v~~~~~~~~~~~-~l~~g~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~-------- 341 (420)
T 3vl1_A 287 SK-----------FTCSCNSLTVDGNNAN-YIYAGYENGMLAQWDLRSPEC-----PVGEFLINEGTPINNV-------- 341 (420)
T ss_dssp CT-----------TSSCEEEEEECSSCTT-EEEEEETTSEEEEEETTCTTS-----CSEEEEESTTSCEEEE--------
T ss_pred cc-----------cCCCceeEEEeCCCCC-EEEEEeCCCeEEEEEcCCCcC-----chhhhhccCCCCceEE--------
Confidence 42 6689999999999875 578999999999999998643 2466663477788887
Q ss_pred CCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 335 RPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.+ +++++|++++.||.|++|++...
T Consensus 342 -~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 342 -YF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp -EE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred -Ee-CCCCEEEEecCCccEEEEeccCC
Confidence 44 57789999999999999999874
No 55
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-41 Score=297.24 Aligned_cols=271 Identities=15% Similarity=0.207 Sum_probs=229.6
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-------------------CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-------------------DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ 71 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-------------------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~ 71 (389)
..++++ ++.+++|++. +.+..+.+ ...|.+++|+|++++|++|+.|+.|++||+.+++
T Consensus 78 ~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~ 156 (393)
T 1erj_A 78 YLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK 156 (393)
T ss_dssp EEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 345544 6889999975 34444432 1249999999999999999999999999999999
Q ss_pred eeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEE
Q 016457 72 YSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQF 150 (389)
Q Consensus 72 ~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i 150 (389)
.+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++....+.. ...+.+++|+| ++..+++++.|+.|++
T Consensus 157 ~~~~~~~h~~~v~~~~~~p~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~s~d~~v~i 233 (393)
T 1erj_A 157 IVMILQGHEQDIYSLDYFPSG--DKLVSGSGDRTVRIWDLRTGQCSLTLSI-EDGVTTVAVSPGDGKYIAAGSLDRAVRV 233 (393)
T ss_dssp EEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSTTCCEEEEEETTSCEEE
T ss_pred EEEEEccCCCCEEEEEEcCCC--CEEEEecCCCcEEEEECCCCeeEEEEEc-CCCcEEEEEECCCCCEEEEEcCCCcEEE
Confidence 999999999999999999999 7999999999999999999998888875 57899999999 6788888889999999
Q ss_pred EECcCCceeeeee------ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCC--------CCccceeeeccCCc
Q 016457 151 WDWRNKKQVACLE------ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN--------DDDLLESVINVGTS 216 (389)
Q Consensus 151 wd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~~~~~~ 216 (389)
||+++++.+..+. .+|...|.+++|+|++. +|++++.|+.|++||+++... .......+.+|...
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 312 (393)
T 1erj_A 234 WDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 312 (393)
T ss_dssp EETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSC
T ss_pred EECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCc
Confidence 9999988777662 26889999999999996 999999999999999985421 11234456788999
Q ss_pred eeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC------CCCeEEEEEec
Q 016457 217 VGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG------EGENLWVIGGT 290 (389)
Q Consensus 217 i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~l~~g~ 290 (389)
|.+++|+ +++.+|++++.|+.|++||+.+++.+..+.+ |...|.+++|++ +++ +|++|+
T Consensus 313 v~~~~~~-~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~------------h~~~v~~v~~~~~~~~~p~~~--~l~sgs 377 (393)
T 1erj_A 313 VLSVATT-QNDEYILSGSKDRGVLFWDKKSGNPLLMLQG------------HRNSVISVAVANGSSLGPEYN--VFATGS 377 (393)
T ss_dssp EEEEEEC-GGGCEEEEEETTSEEEEEETTTCCEEEEEEC------------CSSCEEEEEECSSCTTCTTCE--EEEEEE
T ss_pred EEEEEEC-CCCCEEEEEeCCCeEEEEECCCCeEEEEECC------------CCCCEEEEEecCCcCcCCCCC--EEEEEC
Confidence 9999999 6788999999999999999999999988887 668999998876 556 899999
Q ss_pred CCceEEEEEeccC
Q 016457 291 GAGTVGYFPVNYG 303 (389)
Q Consensus 291 ~dg~i~i~~~~~~ 303 (389)
.||.|++|++...
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 9999999998753
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-42 Score=307.26 Aligned_cols=306 Identities=14% Similarity=0.157 Sum_probs=244.5
Q ss_pred EEecC-ceeeee-ec-CcceEEEeecC-CCCeEEEEecCCeEEEEeCCC---ce---eeeeecCCCCcEEEEEEeCCCCC
Q 016457 25 RFGLK-NSIQTN-FG-DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVT---GQ---YSGECKGHSSTVNQISFSGPSTP 94 (389)
Q Consensus 25 ~w~~~-~~~~~~-~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~---~~---~~~~~~~~~~~v~~i~~~~~~~~ 94 (389)
.|+.. +.+..+ .+ .+.|++++|+| ++++|++|+.||+|+|||+.+ +. ....+ +|...|.+++|+|++
T Consensus 47 ~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~-- 123 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNF-- 123 (437)
T ss_dssp GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTS--
T ss_pred cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCC--
Confidence 47754 566667 55 79999999999 999999999999999999876 43 22233 499999999999988
Q ss_pred CEEEEEecCCeEEEEEcc---CCeEEEEEEc------------CCCCeEEEE--EeCCCCeEEEeecCCeEEEEECcCCc
Q 016457 95 HVLHSCSSDGTIRAWDTR---SFHEVWSVTA------------GSQEIFCFS--FGGSTDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 95 ~~l~s~~~dg~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
.+|++|+.||+|++||+. +++.+..+.. +...+.++. +++++..+++++.|+.|++||+++++
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 203 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE 203 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe
Confidence 799999999999999995 5544444332 345566666 55678889999999999999999999
Q ss_pred eeeeeeec--ccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-ccCCceeeEEEec---CCCcEEE
Q 016457 158 QVACLEES--HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFG---ETNKHLW 231 (389)
Q Consensus 158 ~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~---~~~~~l~ 231 (389)
.+..+. . |...|++++|+|++. +|++|+.||.|++||++++ ..+..+. .+...|.+++|+| +++.+|+
T Consensus 204 ~~~~~~-~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~ 277 (437)
T 3gre_A 204 RLQIIE-NSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYGKNSVIVV 277 (437)
T ss_dssp EEEEEE-CCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTCTTEEEEE
T ss_pred eeEEEc-cCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccCCCccEEE
Confidence 999988 5 889999999999985 9999999999999999953 3444443 6777999998774 4677999
Q ss_pred EEecCCcEEEEEcCCCceeEEeeccccccc-CCcc-------------CCCCCceeeecccCCCCeEEEEEecCCceEEE
Q 016457 232 CLTHIETLSIWDWKDGQNVASFENARSLAS-DSWT-------------LDDVDYFVDCHYPGEGENLWVIGGTGAGTVGY 297 (389)
Q Consensus 232 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i 297 (389)
+++.|+.|++||+.+++++..+..+..... ..+. ..|...|.+++|+ +++ +|++|+.||.|++
T Consensus 278 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~--~l~s~~~d~~i~~ 354 (437)
T 3gre_A 278 GGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK--ILLTDEATSSIVM 354 (437)
T ss_dssp EESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE--EEEEEGGGTEEEE
T ss_pred EEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce--EEEecCCCCeEEE
Confidence 999999999999999999988886532111 1111 1277789999999 566 8999999999999
Q ss_pred EEeccCCccccCCCeEEEe------------------------------------cccceeeeeccCCCcccCCCCCCC-
Q 016457 298 FPVNYGGAATIGPPEAVLV------------------------------------GGHTAVVRSVLPMPSVQGRPAQSH- 340 (389)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~------------------------------------~~h~~~v~~~~~~~~~~~~~~s~~- 340 (389)
||+.+++. +..+. ..|...|+++ +|+++
T Consensus 355 wd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i---------~~~~~~ 419 (437)
T 3gre_A 355 FSLNELSS------SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSI---------STCEVD 419 (437)
T ss_dssp EETTCGGG------CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEE---------EEEESS
T ss_pred EECCCccc------ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeE---------eeeccC
Confidence 99998765 23332 1277788888 88877
Q ss_pred -ceeEEEecCCCeEEEEe
Q 016457 341 -GIFGWTGGEDGRLCCWL 357 (389)
Q Consensus 341 -~~~l~s~~~dg~v~iW~ 357 (389)
+.+|+||+.||.|+||+
T Consensus 420 ~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 420 ETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SSEEEEEEETTSCEEEEC
T ss_pred CceEEEEEcCCceEEEeC
Confidence 88999999999999995
No 57
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=298.71 Aligned_cols=314 Identities=15% Similarity=0.180 Sum_probs=251.3
Q ss_pred CCCeEEEEecC--ceeeeeec-CcceEEEeecC-CCCeEEEEecCCeEEEEeCCCceeeeeec-------------CCCC
Q 016457 19 NVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQYSGECK-------------GHSS 81 (389)
Q Consensus 19 ~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-------------~~~~ 81 (389)
.++.+++|+.. +....+.+ .+.|++++|+| ++++|++|+.||.|++||+.+++....+. +|..
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 34556666653 55666666 89999999999 99999999999999999999876655543 5999
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCC---eEEEeecCCeEEEEECcCCce
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD---YLLAAGCGSQIQFWDWRNKKQ 158 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~iwd~~~~~~ 158 (389)
.|.+++|+|++. .+|++++.||.|++||+.+++.+..+. +...+.++.++|.+. .+++++.|+.|++||+++++.
T Consensus 101 ~v~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 101 SVETVQWYPHDT-GMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp CEEEEEECTTCT-TCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred cEEEEEEccCCC-cEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 999999999432 699999999999999999999988887 568899999998544 788888899999999999999
Q ss_pred eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC------------CccceeeeccCCceeeEEEecCC
Q 016457 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND------------DDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
+..+. .|...|.+++|+|+++.+|++++.||.|++||+++.... .........|...|.+++|+ ++
T Consensus 179 ~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~ 256 (408)
T 4a11_B 179 SHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT-SD 256 (408)
T ss_dssp CEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC-TT
T ss_pred eeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc-CC
Confidence 98888 899999999999999656999999999999999865311 11112225678899999999 78
Q ss_pred CcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCcc
Q 016457 227 NKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAA 306 (389)
Q Consensus 227 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~ 306 (389)
+.+|++++.|+.|++||+.+++....+........ ............ +. .+++++.++.|++||+.+++.
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~--~~~~~~~~~~i~v~d~~~~~~- 326 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS------KKGLKFTVSCGC-SS--EFVFVPYGSTIAVYTVYSGEQ- 326 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC------SSCCCCEECCSS-SS--CEEEEEETTEEEEEETTTCCE-
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccc------cccceeEEecCC-Cc--eEEEEecCCEEEEEECcCCcc-
Confidence 89999999999999999998876654433211000 111112222222 33 356667899999999998776
Q ss_pred ccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 307 TIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 307 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+..+. +|...|.++ +|+|++++|++|+.||.|++|++...
T Consensus 327 -----~~~~~-~~~~~v~~~---------~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 327 -----ITMLK-GHYKTVDCC---------VFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp -----EEEEC-CCSSCEEEE---------EEETTTTEEEEEETTSCEEEEEECC-
T ss_pred -----eeeec-cCCCeEEEE---------EEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 66665 899999999 99999999999999999999999876
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.5e-41 Score=304.21 Aligned_cols=303 Identities=15% Similarity=0.182 Sum_probs=259.7
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
..++++.|++|++||+. +.+..+.+ .+.|.+++|+|++ +|++|+.||+|++||+.+++.+..+.+|...|.+++|+
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 212 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIV 212 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEe
Confidence 56788999999999985 46667777 8999999999988 99999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCe-----------------------EEEEEEcCCCCeEEEEEeCCCCeEEEeecCC
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFH-----------------------EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~-----------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 146 (389)
+...+.++++|+.||+|++||+.++. .+..+.+|...+.++. +++..+++++.|+
T Consensus 213 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~d~ 290 (464)
T 3v7d_B 213 EYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDN 290 (464)
T ss_dssp ESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EETTEEEEEETTS
T ss_pred cCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCCCEEEEEeCCC
Confidence 53222799999999999999998764 2556778888888875 4688999999999
Q ss_pred eEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 147 QIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
.|++||+++++.+..+. +|...|.+++|+|++. .+++|+.||.|++||++++ ..+..+..|...|.+++|+
T Consensus 291 ~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~--- 361 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENG----ELMYTLQGHTALVGLLRLS--- 361 (464)
T ss_dssp CEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEC---
T ss_pred eEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC----cEEEEEeCCCCcEEEEEEc---
Confidence 99999999999999998 8999999999999996 9999999999999999854 5677778899999999997
Q ss_pred CcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCcc
Q 016457 227 NKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAA 306 (389)
Q Consensus 227 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~ 306 (389)
+.+|++++.||.|++||+.++.....+. +...+..++|+++++ ++++|+ ||.|++||+.+++.
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~~~~~~-------------~~~~~~~~~~~~~~~--~l~~~~-dg~i~iwd~~~g~~- 424 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSRKFSYH-------------HTNLSAITTFYVSDN--ILVSGS-ENQFNIYNLRSGKL- 424 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEE-------------CTTCCCEEEEEECSS--EEEEEE-TTEEEEEETTTCCE-
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeeec-------------CCCCccEEEEEeCCC--EEEEec-CCeEEEEECCCCcE-
Confidence 3699999999999999999887666554 446677889999998 888887 89999999999876
Q ss_pred ccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 307 TIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 307 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
+.....+|...|.++ +|+ +..++++++.||.+.+|-++
T Consensus 425 -----~~~~~~~~~~~v~~v---------~~~-~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 425 -----VHANILKDADQIWSV---------NFK-GKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp -----EESCTTTTCSEEEEE---------EEE-TTEEEEEEEETTEEEEEEEE
T ss_pred -----EehhhccCCCcEEEE---------Eec-CCEEEEEEEeCCeEEEEEee
Confidence 554445788999999 886 45566777788877776554
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.6e-41 Score=340.83 Aligned_cols=326 Identities=17% Similarity=0.215 Sum_probs=274.2
Q ss_pred CCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEE
Q 016457 12 PKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~ 88 (389)
...++++.|++|++|+.. +.+..+.+ .+.|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~ 707 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHF 707 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEE
Confidence 356788999999999985 46677777 899999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeee------
Q 016457 89 SGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACL------ 162 (389)
Q Consensus 89 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~------ 162 (389)
+|++...++++|+.|+.|++||+.+++.+..+.+|...|++++|+|++..+++++.||.|++||+++++....+
T Consensus 708 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~ 787 (1249)
T 3sfz_A 708 TNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFF 787 (1249)
T ss_dssp CSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC
T ss_pred ecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccc
Confidence 99654468999999999999999999999999999999999999999999999999999999999876543322
Q ss_pred ------------------------------------------------eecccCCeeEEEEecCCCCeEEEEeCCCcEEE
Q 016457 163 ------------------------------------------------EESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 163 ------------------------------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
..+|...+.+++|+|++. .+++++.||.|++
T Consensus 788 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~v 866 (1249)
T 3sfz_A 788 LSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVEL 866 (1249)
T ss_dssp --------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEE
T ss_pred cccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEE
Confidence 125778899999999996 9999999999999
Q ss_pred EecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCcee------E--------------Eee
Q 016457 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNV------A--------------SFE 254 (389)
Q Consensus 195 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------~--------------~~~ 254 (389)
||+.++ ..+..+..|...|.+++|+ +++.++++++.|+.|++|++.+.... . ...
T Consensus 867 wd~~~~----~~~~~~~~h~~~v~~v~~s-pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1249)
T 3sfz_A 867 WNIDSR----LKVADCRGHLSWVHGVMFS-PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVD 941 (1249)
T ss_dssp EETTTT----EEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEE
T ss_pred EEcCCC----ceeeecCCCccceEEEEEC-CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEec
Confidence 999954 5567778899999999999 78899999999999999997532110 0 000
Q ss_pred cccc-----cccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCC
Q 016457 255 NARS-----LASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPM 329 (389)
Q Consensus 255 ~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 329 (389)
.... .........+...+.+++|+|+++ ++++|+.+|.|++|++.+++. +..+. +|...|.++
T Consensus 942 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~--~l~~g~~~g~i~i~d~~~~~~------~~~~~-~h~~~v~~l--- 1009 (1249)
T 3sfz_A 942 NIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLE--YVAFGDEDGAIKIIELPNNRV------FSSGV-GHKKAVRHI--- 1009 (1249)
T ss_dssp SSSSEEEEEESSCCEEEECCSCEEEEEECTTSS--EEEEEETTSCCEEEETTTTSC------EEECC-CCSSCCCCE---
T ss_pred CCcceEEEecCcceEEEcccCcEEEEEEcCCCC--EEEEEcCCCCEEEEEcCCCce------eeecc-cCCCceEEE---
Confidence 0000 000000111346789999999999 899999999999999998776 45554 899999999
Q ss_pred CcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 330 PSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 330 ~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|+|+|++|++++.||.|++|++...
T Consensus 1010 ------~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 1010 ------QFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp ------EECSSSSCEEEECSSSBEEEEETTTT
T ss_pred ------EECCCCCEEEEEcCCCEEEEEECCCC
Confidence 99999999999999999999999875
No 60
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-42 Score=330.52 Aligned_cols=328 Identities=11% Similarity=0.051 Sum_probs=243.6
Q ss_pred CccccCCCCeEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceee-----------eeecCC
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYS-----------GECKGH 79 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-----------~~~~~~ 79 (389)
..++++.|++|++||+. +.+..+...+.|++++|+|++++|++|+.||.|++||+.+++.. ..+.+|
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred EEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC
Confidence 47889999999999985 45666666778999999999999999999999999999988753 345679
Q ss_pred CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC------------------CCCeEEEEEeCCCCeEEE
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG------------------SQEIFCFSFGGSTDYLLA 141 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~ 141 (389)
.+.|.+++|+|++. ..|++|+.||.| +||+++++.+..+..| ...|++++|+|++..|++
T Consensus 151 ~~~V~sl~~sp~~~-~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 151 LSPIVSIQWNPRDI-GTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp CCCCCEEEEETTEE-EEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred CCCeEEEEEccCCC-CEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 99999999999642 589999999999 9999999999888765 467999999999999999
Q ss_pred eecCCeEEEEECcCCceeee--ee--ec-------------ccCCeeEEEEec----CCCCeEEEEeCC-----CcEEEE
Q 016457 142 AGCGSQIQFWDWRNKKQVAC--LE--ES-------------HVEDVTQVHFVP----NNQNKVVSASVD-----GLICTF 195 (389)
Q Consensus 142 ~~~d~~i~iwd~~~~~~~~~--~~--~~-------------~~~~v~~~~~~~----~~~~~l~~~~~d-----~~i~i~ 195 (389)
++.||.|++||+++++++.. +. .. |...|++++|++ ++..++++|+.+ ..+.+|
T Consensus 229 gs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~ 308 (902)
T 2oaj_A 229 IHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMI 308 (902)
T ss_dssp EETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEE
T ss_pred EECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEE
Confidence 99999999999999887653 21 01 244789999954 332356666544 245555
Q ss_pred e-----------------------------------------------------------------------cCCCCCCC
Q 016457 196 D-----------------------------------------------------------------------TGGDINDD 204 (389)
Q Consensus 196 d-----------------------------------------------------------------------~~~~~~~~ 204 (389)
+ +.++....
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~ 388 (902)
T 2oaj_A 309 DLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTD 388 (902)
T ss_dssp EEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEEC
T ss_pred ecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccc
Confidence 5 22110000
Q ss_pred c---cceeeeccCCcee----------------------------------eEEEecCCCcEEEEEecCCcEEEEEcCCC
Q 016457 205 D---LLESVINVGTSVG----------------------------------KVGFFGETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 205 ~---~~~~~~~~~~~i~----------------------------------~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
. ....+..|...|+ .++|+ +++++|++++.|++|++||+.++
T Consensus 389 ~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~s-pdg~~laSgs~DgtVrlWd~~~g 467 (902)
T 2oaj_A 389 KASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPA-EYGTAFITGHSNGSVRIYDASHG 467 (902)
T ss_dssp CGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCC-SEEEEEEEEETTSEEEEEESSCC
T ss_pred ccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCccccc-ccCcEEEEecCCCcEEEEECCCc
Confidence 0 0000011112333 34455 67889999999999999999877
Q ss_pred cee----EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccc-------c--------
Q 016457 248 QNV----ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAAT-------I-------- 308 (389)
Q Consensus 248 ~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~-------~-------- 308 (389)
... ......+.+ ..+|...|.+++|+|+++ +||+|+.||+|+||++.+++... .
T Consensus 468 ~~~~~~~~~~~l~~~~-----~~~h~~~V~svafspdg~--~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 540 (902)
T 2oaj_A 468 DIQDNASFEVNLSRTL-----NKAKELAVDKISFAAETL--ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRR 540 (902)
T ss_dssp TTTTTBCEEEEHHHHT-----TCSSSCCEEEEEEETTTT--EEEEEETTSCEEEEEEEECCC---------------CCS
T ss_pred cccCCceEEeechhhc-----CCCCCCceeEEEecCCCC--eEEEEecCcEEEEEEecCccccCccccCCCcccceeeee
Confidence 421 111100000 013778999999999999 89999999999999998763200 0
Q ss_pred ------------------------CCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 309 ------------------------GPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 309 ------------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..++..+. +|.+.|+++ +||||| +||+|+.||+|++||++..
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~sv---------afSpdG-~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 541 FSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAI---------NNSNIG-FVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp CCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEE---------EECBTS-EEEEEETTSEEEEEETTTT
T ss_pred ccccCCccccccccccCCCCCCCccceeEEEE-cCCCcEEEE---------EecCCc-EEEEEeCCCcEEEEECCCC
Confidence 01244554 799999999 999999 9999999999999998765
No 61
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.2e-42 Score=300.26 Aligned_cols=285 Identities=10% Similarity=0.054 Sum_probs=223.2
Q ss_pred CcceEEEeecCCCCeEEEEecC-------CeEEEEeCCCcee----------eeeecCCCCcEEEEEEeCCCCCCEEEEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLST-------NVVKLYSPVTGQY----------SGECKGHSSTVNQISFSGPSTPHVLHSC 100 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d-------~~i~iw~~~~~~~----------~~~~~~~~~~v~~i~~~~~~~~~~l~s~ 100 (389)
.-+|++++|+||+++|++|+.+ +.|++|++..+.. ...+.+|...|.++++.. ..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~----~~~~~g 89 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK----GIILVG 89 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET----TEEEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC----CEEEEE
Confidence 5689999999999999999753 3599999875432 123567888999988864 355554
Q ss_pred -----------ecCCeEEEEEccCCeE----EEEEE-----cCCCCeEEEEEeCCCCeEEEee--cCCeEEEEECcCCce
Q 016457 101 -----------SSDGTIRAWDTRSFHE----VWSVT-----AGSQEIFCFSFGGSTDYLLAAG--CGSQIQFWDWRNKKQ 158 (389)
Q Consensus 101 -----------~~dg~i~iwd~~~~~~----~~~~~-----~~~~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~ 158 (389)
+.|+.+++|++..... ..... .+...+.+++|+|++..+++++ .|+.|++||+++++.
T Consensus 90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE
Confidence 4578899999875432 11221 1245688999999999987654 489999999999999
Q ss_pred eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCC-
Q 016457 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE- 237 (389)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~- 237 (389)
+..+. |...|.+++|+|++. ++++++.+ .+.+|+..++. .........|...|.+++|+ +++.++++++.|+
T Consensus 170 ~~~~~--~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~--~~~~~~~~~~~~~v~~v~fs-pdg~~l~~~s~d~~ 242 (365)
T 4h5i_A 170 KFEIE--TRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGS--CIARKTDFDKNWSLSKINFI-ADDTVLIAASLKKG 242 (365)
T ss_dssp EEEEE--CSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCC--EEEEECCCCTTEEEEEEEEE-ETTEEEEEEEESSS
T ss_pred EEEeC--CCCceEEEEEccCCc-eEEeccce-eEEEEEeccCc--ceeeeecCCCCCCEEEEEEc-CCCCEEEEEecCCc
Confidence 98886 788899999999996 88888855 56666665432 11122334577889999999 7888999998887
Q ss_pred ---cEEEEEcCCCcee----EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCC
Q 016457 238 ---TLSIWDWKDGQNV----ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGP 310 (389)
Q Consensus 238 ---~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~ 310 (389)
.+++|++...... ..+.. |...|.+++|+|+|+ +|++|+.|+.|+|||+.+++.
T Consensus 243 ~~~~i~~~~~~~~~~~~~~~~~~~~------------~~~~V~~~~~Spdg~--~lasgs~D~~V~iwd~~~~~~----- 303 (365)
T 4h5i_A 243 KGIVLTKISIKSGNTSVLRSKQVTN------------RFKGITSMDVDMKGE--LAVLASNDNSIALVKLKDLSM----- 303 (365)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEEES------------SCSCEEEEEECTTSC--EEEEEETTSCEEEEETTTTEE-----
T ss_pred ceeEEeecccccceecceeeeeecC------------CCCCeEeEEECCCCC--ceEEEcCCCEEEEEECCCCcE-----
Confidence 6888998766432 23333 778999999999999 999999999999999998776
Q ss_pred CeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCc
Q 016457 311 PEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 311 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~ 362 (389)
+..+..+|...|+++ +|||||++|||||.|++||||++....
T Consensus 304 -~~~~~~gH~~~V~~v---------~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 304 -SKIFKQAHSFAITEV---------TISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp -EEEETTSSSSCEEEE---------EECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred -EEEecCcccCCEEEE---------EECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 667666999999999 999999999999999999999997553
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-40 Score=312.75 Aligned_cols=310 Identities=12% Similarity=0.109 Sum_probs=256.3
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-Cc---ceEEEeecCC-CCeEEEEecCCeEEEEeCCCceeeeee-c---CCCC
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-DD---YVFEIVPKND-WSLMAVSLSTNVVKLYSPVTGQYSGEC-K---GHSS 81 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-~~---~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~-~---~~~~ 81 (389)
..++++.|+.|++|+.. +.+..+.+ .. .|.+++|+|+ +++|++++.|+.|++||+.+++.+..+ . +|..
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 254 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 254 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC
Confidence 47788999999999986 35566665 66 8999999999 999999999999999999999999988 6 8999
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC----CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG----SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
.|.+++|+ ++ .+|++++.|+.|++||+.+++.+..+..+ ...+.++.|. ++..+++++.|+.|++||+++++
T Consensus 255 ~v~~~~~~-~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 255 GIFALSWL-DS--QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE 330 (615)
T ss_dssp CEEEEEES-SS--SEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE
T ss_pred ceEEEEEc-CC--CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc
Confidence 99999999 77 79999999999999999999999999877 3678888887 88999999999999999999888
Q ss_pred eeeeeeecccCCeeEEEEecC---------------------------------CCCeEEEEeCCCcEEEEecCCCCC--
Q 016457 158 QVACLEESHVEDVTQVHFVPN---------------------------------NQNKVVSASVDGLICTFDTGGDIN-- 202 (389)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~---------------------------------~~~~l~~~~~d~~i~i~d~~~~~~-- 202 (389)
.+..+. +|...|++++| |+ +. .+++++.|+.|++||+.++..
T Consensus 331 ~~~~~~-~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~~~~~~~~~~~~ 407 (615)
T 1pgu_A 331 VLKTIS-GHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGS 407 (615)
T ss_dssp EEEEEC-CCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSS
T ss_pred EEEEEe-CCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCc-EEEEEeCCCCEEEEEcccCcccC
Confidence 777775 55555555544 32 42 566666666666666542100
Q ss_pred --------------------------------------------------------------------CCccc-eeeecc
Q 016457 203 --------------------------------------------------------------------DDDLL-ESVINV 213 (389)
Q Consensus 203 --------------------------------------------------------------------~~~~~-~~~~~~ 213 (389)
..... ..+..|
T Consensus 408 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 487 (615)
T 1pgu_A 408 QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 487 (615)
T ss_dssp CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCC
T ss_pred CceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCc
Confidence 00000 334457
Q ss_pred CCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC----------CCCe
Q 016457 214 GTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG----------EGEN 283 (389)
Q Consensus 214 ~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~ 283 (389)
...|.+++|+ +++++|++++.|+.|++||+.+++.+..+... |...|.+++|+| +++
T Consensus 488 ~~~v~~~~~s-~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------h~~~v~~~~~sp~~~~~~~~~~~~~- 554 (615)
T 1pgu_A 488 RAKPSYISIS-PSETYIAAGDVMGKILLYDLQSREVKTSRWAF-----------RTSKINAISWKPAEKGANEEEIEED- 554 (615)
T ss_dssp SSCEEEEEEC-TTSSEEEEEETTSCEEEEETTTTEEEECCSCC-----------CSSCEEEEEECCCC------CCSCC-
T ss_pred cCceEEEEEC-CCCCEEEEcCCCCeEEEeeCCCCcceeEeecC-----------CCCceeEEEEcCccccccccccCCC-
Confidence 7899999999 78899999999999999999999888776641 568999999999 888
Q ss_pred EEEEEecCCceEEEEEeccC-CccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 284 LWVIGGTGAGTVGYFPVNYG-GAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 284 ~~l~~g~~dg~i~i~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|++|+.||.|++|++.++ +. +..+ .+|...|.++ +|+|+++ |++++.||.|++|+++.
T Consensus 555 -~l~~~~~dg~i~iw~~~~~~~~------~~~~-~~h~~~v~~l---------~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 555 -LVATGSLDTNIFIYSVKRPMKI------IKAL-NAHKDGVNNL---------LWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp -EEEEEETTSCEEEEESSCTTCC------EEET-TSSTTCEEEE---------EEEETTE-EEEEETTSCEEEEEEC-
T ss_pred -EEEEEcCCCcEEEEECCCCcee------chhh-hcCccceEEE---------EEcCCCC-eEEecCCceEEEEeeec
Confidence 8999999999999999986 33 4555 4899999999 9999999 99999999999999874
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=4.7e-41 Score=291.56 Aligned_cols=282 Identities=17% Similarity=0.240 Sum_probs=244.8
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE-
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE- 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~- 116 (389)
.+.|.+++|+|||+.++++..++.+.+|............+|...|.+++|+|++ ++|++++ ||.|++||+.+++.
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPT--RHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSS--SEEEEEC-BSEEEEEETTSTTCC
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCC--cEEEEcC-CCeEEEEECCCCCce
Confidence 6789999999999999999888877777666554444455799999999999999 7999998 99999999987643
Q ss_pred --EEEEE--cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc--eeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 117 --VWSVT--AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK--QVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 117 --~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+..+. .|...|.+++|+|++..+++++.|+.|++||+++++ ....+. .|...+.+++|+|++. .+++++.||
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~dg 163 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSK-VCFSCCSDG 163 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSS-EEEEEETTS
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCC-EEEEEeCCC
Confidence 33444 678999999999999999999999999999999877 455666 7889999999999995 999999999
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCC
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVD 270 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (389)
.|++||++++ ..+..+..|...+.+++|+ +++.+|++++.|+.|++||+++++.+..+. +..
T Consensus 164 ~v~~~d~~~~----~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-------------~~~ 225 (337)
T 1gxr_A 164 NIAVWDLHNQ----TLVRQFQGHTDGASCIDIS-NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------------FTS 225 (337)
T ss_dssp CEEEEETTTT----EEEEEECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEE-------------CSS
T ss_pred cEEEEeCCCC----ceeeeeecccCceEEEEEC-CCCCEEEEEecCCcEEEEECCCCceEeeec-------------CCC
Confidence 9999999854 4566677789999999999 678899999999999999999998887765 557
Q ss_pred ceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC
Q 016457 271 YFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED 350 (389)
Q Consensus 271 ~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d 350 (389)
.+.+++|+|+++ ++++++.+|.|++|++.+++. ..+. .|...|.++ +|+|++++|++++.|
T Consensus 226 ~v~~~~~s~~~~--~l~~~~~~~~i~~~~~~~~~~-------~~~~-~~~~~v~~~---------~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 226 QIFSLGYCPTGE--WLAVGMESSNVEVLHVNKPDK-------YQLH-LHESCVLSL---------KFAYCGKWFVSTGKD 286 (337)
T ss_dssp CEEEEEECTTSS--EEEEEETTSCEEEEETTSSCE-------EEEC-CCSSCEEEE---------EECTTSSEEEEEETT
T ss_pred ceEEEEECCCCC--EEEEEcCCCcEEEEECCCCCe-------EEEc-CCccceeEE---------EECCCCCEEEEecCC
Confidence 899999999999 889999999999999998764 4554 899999999 999999999999999
Q ss_pred CeEEEEeccCC
Q 016457 351 GRLCCWLSDDS 361 (389)
Q Consensus 351 g~v~iW~~~~~ 361 (389)
|.|++|++...
T Consensus 287 g~i~~~~~~~~ 297 (337)
T 1gxr_A 287 NLLNAWRTPYG 297 (337)
T ss_dssp SEEEEEETTTC
T ss_pred CcEEEEECCCC
Confidence 99999999876
No 64
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.2e-40 Score=283.77 Aligned_cols=254 Identities=16% Similarity=0.245 Sum_probs=211.7
Q ss_pred eeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCC--ceeeeeecCCCCcEEEEEEeCC--CCCCEEEEEecCCeEEE
Q 016457 34 TNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT--GQYSGECKGHSSTVNQISFSGP--STPHVLHSCSSDGTIRA 108 (389)
Q Consensus 34 ~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~i~~~~~--~~~~~l~s~~~dg~i~i 108 (389)
.+.+ .+.|++++|+|+|++||+|+.|++|+|||+.+ ++.+..+.+|.+.|.+++|+++ + ++|++|+.|++|++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g--~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG--TILASCSYDGKVMI 81 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC--SEEEEEETTTEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC--CEEEEEcCCCEEEE
Confidence 3445 78999999999999999999999999999974 4678889999999999999864 5 79999999999999
Q ss_pred EEccCCe--EEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCce--eeeeeecccCCeeEEEEecCC---
Q 016457 109 WDTRSFH--EVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQ--VACLEESHVEDVTQVHFVPNN--- 179 (389)
Q Consensus 109 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~--- 179 (389)
||+.+++ .+..+..|...|.+++|+|+ +..+++++.|+.|++||++++.. ...+. +|...|.+++|+|++
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CCSSCEEEEEECCCC---
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cccCccceEeecCCcccc
Confidence 9998874 56677889999999999987 77899999999999999987642 34455 899999999999973
Q ss_pred ---------CCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC--CcEEEEEecCCcEEEEEcCCCc
Q 016457 180 ---------QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET--NKHLWCLTHIETLSIWDWKDGQ 248 (389)
Q Consensus 180 ---------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~ 248 (389)
..+|++|+.|+.|++||++++.........+.+|...|.+++|+|.. +.+|++++.|++|++||+.+..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 14899999999999999985432223455677899999999999542 5899999999999999998643
Q ss_pred e---eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 249 N---VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 249 ~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
. ...+... .|...+.+++|+|+++ +|++++.||.|++|+...
T Consensus 241 ~~~~~~~~~~~----------~~~~~v~~~~~s~~g~--~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 241 GPWKKTLLKEE----------KFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SCCEEEESSSS----------CCSSCEEEEEECSSSC--CEEEEETTSCEEEEEECT
T ss_pred Cccceeeeecc----------cCCCcEEEEEECCCCC--EEEEEcCCCcEEEEEECC
Confidence 1 1222111 1668899999999999 889999999999999864
No 65
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-40 Score=283.17 Aligned_cols=256 Identities=14% Similarity=0.210 Sum_probs=211.7
Q ss_pred eeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC--CeEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEE
Q 016457 74 GECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS--FHEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQ 149 (389)
Q Consensus 74 ~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~ 149 (389)
..+.+|.+.|.+++|+|++ ++|++|+.|++|+|||+.. .+.+.++.+|...|.+++|+|+ +..|++++.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g--~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG--KRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTS--SEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCC--CEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 4567899999999999999 7999999999999999974 4677899999999999999864 77889999999999
Q ss_pred EEECcCCc--eeeeeeecccCCeeEEEEecC--CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecC
Q 016457 150 FWDWRNKK--QVACLEESHVEDVTQVHFVPN--NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE 225 (389)
Q Consensus 150 iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 225 (389)
+||+++++ .+..+. .|...|.+++|+|+ +. +|++++.|+.|++||+++... .....+..|...|.+++|+|.
T Consensus 81 iWd~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~--~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGT--TSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEBSSSCBCCCEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSC--BCCEEEECCSSCEEEEEECCC
T ss_pred EEEcCCCceEEEEEee-cCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCc--eeeeeeecccCccceEeecCC
Confidence 99998874 455565 79999999999997 64 999999999999999985421 123456788999999999953
Q ss_pred ------------CCcEEEEEecCCcEEEEEcCCCc----eeEEeecccccccCCccCCCCCceeeecccCCCC-eEEEEE
Q 016457 226 ------------TNKHLWCLTHIETLSIWDWKDGQ----NVASFENARSLASDSWTLDDVDYFVDCHYPGEGE-NLWVIG 288 (389)
Q Consensus 226 ------------~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~l~~ 288 (389)
++.+|++++.|+.|++||+++++ ....+.+ |...|.+++|+|++. ..+|++
T Consensus 157 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~------------H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp C------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSEEEEE
T ss_pred cccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC------------CCCceEEEEECCCCCCceEEEE
Confidence 25689999999999999998765 4455555 779999999999851 128899
Q ss_pred ecCCceEEEEEeccCCccccCCCeEEEe--cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 289 GTGAGTVGYFPVNYGGAATIGPPEAVLV--GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 289 g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
|+.|+.|++||+.+... .....+. .+|...|.++ +|+|+|++|++++.||.|++|+...
T Consensus 225 ~s~D~~v~iWd~~~~~~----~~~~~~~~~~~~~~~v~~~---------~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQDRTCIIWTQDNEQG----PWKKTLLKEEKFPDVLWRA---------SWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETTSCEEEEEESSTTS----CCEEEESSSSCCSSCEEEE---------EECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECCCcEEEEEeCCCCC----ccceeeeecccCCCcEEEE---------EECCCCCEEEEEcCCCcEEEEEECC
Confidence 99999999999987532 0111222 3677889999 9999999999999999999999864
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4e-41 Score=303.60 Aligned_cols=307 Identities=16% Similarity=0.187 Sum_probs=232.0
Q ss_pred cCcceEEEeecCCCCeEEEEecCCeEEEEeCCCce-----------eeeeecCCC------------CcEEEEEEeCCCC
Q 016457 37 GDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ-----------YSGECKGHS------------STVNQISFSGPST 93 (389)
Q Consensus 37 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~i~~~~~~~ 93 (389)
..+.|++++|+|++++||+|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 37899999999999999999999999999998776 577888998 8899999999873
Q ss_pred CCEEEEEecCCeEEEEEccCCeEE---------------------------------------EE-EEcCCCCeEEEEEe
Q 016457 94 PHVLHSCSSDGTIRAWDTRSFHEV---------------------------------------WS-VTAGSQEIFCFSFG 133 (389)
Q Consensus 94 ~~~l~s~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 133 (389)
..+|++++.|++|++||+.++... .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 348999999999999999865432 12 25689999999999
Q ss_pred CCCCeEEEeecCCeEEEEECcC-Cceee-------eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCc
Q 016457 134 GSTDYLLAAGCGSQIQFWDWRN-KKQVA-------CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD 205 (389)
Q Consensus 134 ~~~~~l~~~~~d~~i~iwd~~~-~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 205 (389)
|++..++++ .|+.|++||+++ ++.+. .+. +|...|++++|+|+++++|++|+.||.|++||++++.....
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANME-ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGG-GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeeccccccc-ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 998888887 899999999994 44444 244 78999999999999844999999999999999996643222
Q ss_pred cceeeeccCC------------ceeeEEEecCCCcEEEEEecCCcEEEEEcCC-CceeEEeecccccccCCccCCCCC--
Q 016457 206 LLESVINVGT------------SVGKVGFFGETNKHLWCLTHIETLSIWDWKD-GQNVASFENARSLASDSWTLDDVD-- 270 (389)
Q Consensus 206 ~~~~~~~~~~------------~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~-- 270 (389)
....+..+.. .|.+++|+ +++.+|++++. +.|++||+++ ++++..+..+...........+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFS-HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEEC-TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEEC-CCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 3455556654 89999999 68899999998 9999999997 788877776431110000000001
Q ss_pred -ceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeee------------------------e
Q 016457 271 -YFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVR------------------------S 325 (389)
Q Consensus 271 -~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~------------------------~ 325 (389)
.+..++|+|+++ +|++|+.||.|++||+.+++. ..+. +|..+.. .
T Consensus 343 ~~~~~~~~s~~~~--~l~s~s~dg~v~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (447)
T 3dw8_B 343 FDKFECCWNGSDS--VVMTGSYNNFFRMFDRNTKRD-------ITLE-ASRENNKPRTVLKPRKVCASGKRKKDEISVDS 412 (447)
T ss_dssp GCCCCEEECTTSS--EEEEECSTTEEEEEETTTCCE-------EEEE-CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGG
T ss_pred ccceEEEECCCCC--EEEEeccCCEEEEEEcCCCcc-------eeee-ecccccccccccCCccccccCCcccccccccc
Confidence 133489999999 889999999999999998765 2222 2221110 1
Q ss_pred ccCCCcccCCCCCCCceeEEEecCCCeEEEEec
Q 016457 326 VLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLS 358 (389)
Q Consensus 326 ~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~ 358 (389)
+-....+..++|+|++.+||+++.++ +++|..
T Consensus 413 ~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 413 LDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred cccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 11222334459999999999999775 778764
No 67
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-41 Score=327.35 Aligned_cols=330 Identities=11% Similarity=0.051 Sum_probs=242.1
Q ss_pred CCccccCCCCeEEEEecCceee--eeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 12 PKSQSCDNVNSIKRFGLKNSIQ--TNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
...|+++.|++|++|+...... .+.+...|.+++|+| +++|++++.|++|+|||+.+++.+..+. |...|++++|+
T Consensus 30 ~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~s 107 (902)
T 2oaj_A 30 NLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTD 107 (902)
T ss_dssp TEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECC
T ss_pred CEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEEC
Confidence 4678999999999999865332 233378899999999 8899999999999999999999888886 77899999999
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCeEE-----------EEEEcCCCCeEEEEEeCCC-CeEEEeecCCeEEEEECcCCc
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFHEV-----------WSVTAGSQEIFCFSFGGST-DYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~ 157 (389)
|++ ++|++|+.||+|++||+++++.. ..+.+|...|.+++|+|++ ..+++++.|+.| +||+++++
T Consensus 108 p~g--~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 108 ASL--DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp TTC--SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTE
T ss_pred CCC--CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCc
Confidence 999 79999999999999999988764 1235578899999999965 577777789999 99999998
Q ss_pred eeeeeeecc------------------cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCc-cceeee-------
Q 016457 158 QVACLEESH------------------VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD-LLESVI------- 211 (389)
Q Consensus 158 ~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~------- 211 (389)
.+..+. .| ...|++++|+|++. +|++++.||.|++||++++..... .+....
T Consensus 185 ~~~~~~-~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~ 262 (902)
T 2oaj_A 185 IKQSFI-YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPD 262 (902)
T ss_dssp EEEEEC-CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTT
T ss_pred eEEEEe-cccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCc
Confidence 887776 44 47799999999995 999999999999999986531100 000000
Q ss_pred ------ccCCceeeEEEec---CC-CcEEEEEecC-----CcEEEEEc--------------------------------
Q 016457 212 ------NVGTSVGKVGFFG---ET-NKHLWCLTHI-----ETLSIWDW-------------------------------- 244 (389)
Q Consensus 212 ------~~~~~i~~~~~~~---~~-~~~l~~~~~d-----~~i~i~d~-------------------------------- 244 (389)
.+...|.+++|++ ++ +.+|++++.+ ..+.+|++
T Consensus 263 ~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 342 (902)
T 2oaj_A 263 YIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTN 342 (902)
T ss_dssp CCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSS
T ss_pred CCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCC
Confidence 1234688888863 22 2455666554 25666663
Q ss_pred ---------------------------------------CCCceeEEe-eccccc-------------------------
Q 016457 245 ---------------------------------------KDGQNVASF-ENARSL------------------------- 259 (389)
Q Consensus 245 ---------------------------------------~~~~~~~~~-~~~~~~------------------------- 259 (389)
.++...... ..+..+
T Consensus 343 ~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~ 422 (902)
T 2oaj_A 343 VPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALS 422 (902)
T ss_dssp SCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHH
T ss_pred CceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHh
Confidence 111100000 000000
Q ss_pred --ccCCc-cCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe------cccceeeeeccCCC
Q 016457 260 --ASDSW-TLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV------GGHTAVVRSVLPMP 330 (389)
Q Consensus 260 --~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~ 330 (389)
....+ -.+|...+..++|+|+++ +|++|+.||+|++||+.++..... ....+. .+|...|.++
T Consensus 423 ~~~~~~~~l~G~~~~v~sv~~spdg~--~laSgs~DgtVrlWd~~~g~~~~~--~~~~~~l~~~~~~~h~~~V~sv---- 494 (902)
T 2oaj_A 423 AAQNKDYLLKGGVRTKRQKLPAEYGT--AFITGHSNGSVRIYDASHGDIQDN--ASFEVNLSRTLNKAKELAVDKI---- 494 (902)
T ss_dssp TTBCCCCSCCCSBCCCCCCCCCSEEE--EEEEEETTSEEEEEESSCCTTTTT--BCEEEEHHHHTTCSSSCCEEEE----
T ss_pred cccCCCCcccCCcCCCCcccccccCc--EEEEecCCCcEEEEECCCccccCC--ceEEeechhhcCCCCCCceeEE----
Confidence 00000 012445566678889888 899999999999999998754110 111111 2788999999
Q ss_pred cccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 331 SVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 331 ~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|+|||++||+|+.||+|+||+++..
T Consensus 495 -----afspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 495 -----SFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp -----EEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred -----EecCCCCeEEEEecCcEEEEEEecCc
Confidence 99999999999999999999999865
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.1e-40 Score=318.05 Aligned_cols=291 Identities=16% Similarity=0.184 Sum_probs=256.3
Q ss_pred eeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 32 IQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
.+.+.+ .+.|.+++|+|++++||+|+.+|.|+|||+.+++.+..+.+|...|.+++|+|++ ++|++++.||.|++||
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARK--NWIIVGSDDFRIRVFN 83 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGG--TEEEEEETTSEEEEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCC--CEEEEEeCCCeEEEEE
Confidence 455666 8899999999999999999999999999999999999999999999999999999 7999999999999999
Q ss_pred ccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCC-ceeeeeeecccCCeeEEEEec-CCCCeEEEEeC
Q 016457 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK-KQVACLEESHVEDVTQVHFVP-NNQNKVVSASV 188 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~ 188 (389)
+.+++.+..+..|...|++++|+|++..+++++.||.|++||++++ .....+. +|...|.+++|+| ++ ..|++++.
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~-~~l~~~~~ 161 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDP-STFASGCL 161 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEE-EEEEEEET
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCC-CEEEEEeC
Confidence 9999999999999999999999999999999999999999999987 5556666 8999999999999 66 49999999
Q ss_pred CCcEEEEecCCCCCCCccceeeec-cCCceeeEEEec-CCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccC
Q 016457 189 DGLICTFDTGGDINDDDLLESVIN-VGTSVGKVGFFG-ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTL 266 (389)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 266 (389)
||.|++||+.++ ........ +...+..++|+| +++.++++++.|+.|++||+.+++.+..+..
T Consensus 162 dg~v~vwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----------- 226 (814)
T 3mkq_A 162 DRTVKVWSLGQS----TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG----------- 226 (814)
T ss_dssp TSEEEEEETTCS----SCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC-----------
T ss_pred CCeEEEEECCCC----cceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC-----------
Confidence 999999999854 23334443 348899999994 1788999999999999999999999888876
Q ss_pred CCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCce--eE
Q 016457 267 DDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI--FG 344 (389)
Q Consensus 267 ~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~--~l 344 (389)
|...+.+++|+|+++ +|++|+.||.|++||+.+++. +..+. .|...|.++ +|+|++. ++
T Consensus 227 -~~~~v~~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~------~~~~~-~~~~~v~~~---------~~~~~~~~~~~ 287 (814)
T 3mkq_A 227 -HMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSSTYKV------EKTLN-VGLERSWCI---------ATHPTGRKNYI 287 (814)
T ss_dssp -CSSCEEEEEECSSSS--EEEEEETTSCEEEEETTTCSE------EEEEC-CSSSSEEEE---------EECTTCGGGEE
T ss_pred -CCCCEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCcE------EEEee-cCCCcEEEE---------EEccCCCceEE
Confidence 668999999999999 889999999999999998776 55554 788899999 9999987 34
Q ss_pred EEecCCCeEEEEeccCC
Q 016457 345 WTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 345 ~s~~~dg~v~iW~~~~~ 361 (389)
++++ |+.+.+|++...
T Consensus 288 ~~~~-~~~~~~~~~~~~ 303 (814)
T 3mkq_A 288 ASGF-DNGFTVLSLGND 303 (814)
T ss_dssp EEEE-TTEEEEEECSCC
T ss_pred EEEe-CCCEEEEEcCCC
Confidence 5544 777889987654
No 69
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.2e-39 Score=295.41 Aligned_cols=284 Identities=14% Similarity=0.222 Sum_probs=242.9
Q ss_pred eeeeeec-Ccc-eEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEE
Q 016457 31 SIQTNFG-DDY-VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108 (389)
Q Consensus 31 ~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~i 108 (389)
....+.+ .+. +.++.+ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.||+|++
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~---~l~s~s~dg~i~v 187 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG---ILVSGSTDRTVRV 187 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT---EEEEEETTSCEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC---EEEEEeCCCCEEE
Confidence 3445666 444 577666 45799999999999999999999999999999999999999876 9999999999999
Q ss_pred EEccCCeEEEEEEcCCCCeEEEEEe--CCCCeEEEeecCCeEEEEECcCCce-----------------------eeeee
Q 016457 109 WDTRSFHEVWSVTAGSQEIFCFSFG--GSTDYLLAAGCGSQIQFWDWRNKKQ-----------------------VACLE 163 (389)
Q Consensus 109 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~-----------------------~~~~~ 163 (389)
||+.+++.+..+.+|...|.+++|+ +++..+++++.|+.|++||++++.. +..+.
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9999999999999999999999998 4667888899999999999987653 33444
Q ss_pred ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEE
Q 016457 164 ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWD 243 (389)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d 243 (389)
+|...+.++ ++++. .+++++.|+.|++||++++ ..+..+..|...|.+++|+ +++.++++++.|+.|++||
T Consensus 268 -~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~-~~~~~l~sg~~dg~i~vwd 338 (464)
T 3v7d_B 268 -GHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQM----KCLYILSGHTDRIYSTIYD-HERKRCISASMDTTIRIWD 338 (464)
T ss_dssp -CCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEE-TTTTEEEEEETTSCEEEEE
T ss_pred -CccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCC----cEEEEecCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEE
Confidence 788888877 45564 9999999999999999854 5567777899999999999 7888999999999999999
Q ss_pred cCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceee
Q 016457 244 WKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVV 323 (389)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v 323 (389)
+.+++++..+.. |...+.++.|++ + +|++|+.||.|++||+.++.. .... .|...+
T Consensus 339 ~~~~~~~~~~~~------------h~~~v~~~~~~~--~--~l~s~s~dg~v~vwd~~~~~~------~~~~--~~~~~~ 394 (464)
T 3v7d_B 339 LENGELMYTLQG------------HTALVGLLRLSD--K--FLVSAAADGSIRGWDANDYSR------KFSY--HHTNLS 394 (464)
T ss_dssp TTTTEEEEEECC------------CSSCEEEEEECS--S--EEEEEETTSEEEEEETTTCCE------EEEE--ECTTCC
T ss_pred CCCCcEEEEEeC------------CCCcEEEEEEcC--C--EEEEEeCCCcEEEEECCCCce------eeee--cCCCCc
Confidence 999999999886 668999999984 5 889999999999999998654 2222 355666
Q ss_pred eeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCc
Q 016457 324 RSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 324 ~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~ 362 (389)
..+ +|++++++|++|+ ||.|++|++..+.
T Consensus 395 ~~~---------~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 395 AIT---------TFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CEE---------EEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred cEE---------EEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 666 8999999999999 9999999998763
No 70
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8.5e-40 Score=293.72 Aligned_cols=277 Identities=17% Similarity=0.271 Sum_probs=238.1
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 117 (389)
...|.+++| ++++|++|+.||.|++||+.+++....+.+|...|.+++| ++ ++|++|+.||+|++||+.+++.+
T Consensus 133 ~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~--~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 133 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DE--RVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp CCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CS--SEEEEEETTSCEEEEESSSCCEE
T ss_pred CCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CC--CEEEEEcCCCeEEEEECCCCcEE
Confidence 567888887 7889999999999999999999999999999999999999 55 69999999999999999999999
Q ss_pred EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCcee---eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEE
Q 016457 118 WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV---ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 118 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
..+..|...|.+++|+ ++.+++++.||.|++||+++++.. ..+. +|...|.+++| ++ +.+++|+.||.|++
T Consensus 207 ~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~--~~-~~l~s~~~dg~i~v 280 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDF--DD-KYIVSASGDRTIKV 280 (435)
T ss_dssp EEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEE--ET-TEEEEEETTSEEEE
T ss_pred EEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEe--CC-CEEEEEeCCCeEEE
Confidence 9999999999999996 468999999999999999987765 4555 89999999999 44 49999999999999
Q ss_pred EecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceee
Q 016457 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 195 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
||++++ ..+..+..|...|.++.+. +.++++++.|+.|++||+++++++..+.. |...+.+
T Consensus 281 wd~~~~----~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~------------h~~~v~~ 341 (435)
T 1p22_A 281 WNTSTC----EFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEG------------HEELVRC 341 (435)
T ss_dssp EETTTC----CEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECC------------CSSCEEE
T ss_pred EECCcC----cEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeC------------CcCcEEE
Confidence 999954 5567777899999999985 45999999999999999999999998886 6689999
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEeccCCcccc--C-CCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCC
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATI--G-PPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDG 351 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~--~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg 351 (389)
++| ++. +|++|+.||.|++||+.+++.... . .++..+. +|...|.++ +| ++.+|++|+.||
T Consensus 342 ~~~--~~~--~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l---------~~--~~~~l~s~s~Dg 405 (435)
T 1p22_A 342 IRF--DNK--RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-EHSGRVFRL---------QF--DEFQIVSSSHDD 405 (435)
T ss_dssp EEC--CSS--EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-CCSSCCCCE---------EE--CSSCEEECCSSS
T ss_pred EEe--cCC--EEEEEeCCCcEEEEECCCCCCccccccchheeecc-CCCCCeEEE---------Ee--CCCEEEEEeCCC
Confidence 999 566 889999999999999987652110 0 1245554 899999999 77 788899999999
Q ss_pred eEEEEeccCC
Q 016457 352 RLCCWLSDDS 361 (389)
Q Consensus 352 ~v~iW~~~~~ 361 (389)
.|++|++...
T Consensus 406 ~i~iwd~~~~ 415 (435)
T 1p22_A 406 TILIWDFLND 415 (435)
T ss_dssp EEEEEC----
T ss_pred EEEEEECCCC
Confidence 9999999865
No 71
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2e-39 Score=313.87 Aligned_cols=273 Identities=12% Similarity=0.133 Sum_probs=240.9
Q ss_pred CCCCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEE
Q 016457 10 SQPKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQI 86 (389)
Q Consensus 10 ~~~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i 86 (389)
+.+..++++.+|.|++|+.. ..+..+.+ ...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.++
T Consensus 24 ~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~ 103 (814)
T 3mkq_A 24 TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI 103 (814)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEE
Confidence 44567888999999999975 46667776 8899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCEEEEEecCCeEEEEEccCC-eEEEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECcCCceeeeeee
Q 016457 87 SFSGPSTPHVLHSCSSDGTIRAWDTRSF-HEVWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWRNKKQVACLEE 164 (389)
Q Consensus 87 ~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 164 (389)
+|+|++ .+|++++.||.|++||+.++ .....+..|...|.+++|+| ++..+++++.||.|++||++++.....+..
T Consensus 104 ~~s~~~--~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 181 (814)
T 3mkq_A 104 AVHPTK--PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT 181 (814)
T ss_dssp EECSSS--SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC
T ss_pred EEeCCC--CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec
Confidence 999999 79999999999999999987 77788899999999999999 677888888899999999998888888774
Q ss_pred cccCCeeEEEEec--CCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEE
Q 016457 165 SHVEDVTQVHFVP--NNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIW 242 (389)
Q Consensus 165 ~~~~~v~~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~ 242 (389)
.+...+.+++|+| ++. .+++++.||.|++||++++ ..+..+..|...|.+++|+ +++.++++++.||.|++|
T Consensus 182 ~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 182 GQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVFH-PTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp CCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTT----EEEEEEECCSSCEEEEEEC-SSSSEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCC----cEEEEEcCCCCCEEEEEEc-CCCCEEEEEeCCCeEEEE
Confidence 4558999999999 885 9999999999999999854 4566777889999999999 788899999999999999
Q ss_pred EcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 243 DWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 243 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
|+.+++.+..+.. |...+.+++|+|++..+++++++ ++.+.+|++...
T Consensus 256 d~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 303 (814)
T 3mkq_A 256 NSSTYKVEKTLNV------------GLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGND 303 (814)
T ss_dssp ETTTCSEEEEECC------------SSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCC
T ss_pred ECCCCcEEEEeec------------CCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCC
Confidence 9999999888876 55899999999998865566665 566888887654
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.7e-39 Score=286.48 Aligned_cols=269 Identities=17% Similarity=0.262 Sum_probs=231.3
Q ss_pred ccccCCCCeEEEEecC--ceeeeeec--CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 14 SQSCDNVNSIKRFGLK--NSIQTNFG--DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 14 ~~s~~~~~~i~~w~~~--~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
..+++.++.|++|+.. .....+.. ...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 106 l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 185 (401)
T 4aez_A 106 VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN 185 (401)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC
Confidence 5567789999999986 34444443 7889999999999999999999999999999999999999999999999994
Q ss_pred CCCCCCEEEEEecCCeEEEEEcc-CCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccC
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTR-SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE 168 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (389)
+ ++|++++.||.|++||++ ....+..+..|...|.+++|+|++..+++++.|+.|++||+++++.+..+. .|..
T Consensus 186 --~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~-~~~~ 260 (401)
T 4aez_A 186 --R--HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT-NHNA 260 (401)
T ss_dssp --T--TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC-CCSS
T ss_pred --C--CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec-CCcc
Confidence 3 599999999999999998 567788999999999999999999999999999999999999999998887 8999
Q ss_pred CeeEEEEecCCCCeEEEEe--CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe--cCCcEEEEEc
Q 016457 169 DVTQVHFVPNNQNKVVSAS--VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT--HIETLSIWDW 244 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~i~i~d~ 244 (389)
.|.+++|+|++..++++++ .|+.|++||++++. .+. ...+...+.+++|+ +++.++++++ .|+.|++||+
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~----~~~-~~~~~~~v~~~~~s-~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA----RVN-TVDAGSQVTSLIWS-PHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC----EEE-EEECSSCEEEEEEC-SSSSEEEEEECTTTCEEEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC----EEE-EEeCCCcEEEEEEC-CCCCeEEEEeecCCCcEEEEec
Confidence 9999999998876788766 79999999999542 333 33577889999999 6778888854 8999999999
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
.+++......... |...|.+++|+|+++ +|++++.||.|++|++.+++.
T Consensus 335 ~~~~~~~~~~~~~----------h~~~v~~~~~s~dg~--~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 335 SSSGLTKQVDIPA----------HDTRVLYSALSPDGR--ILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp ETTEEEEEEEEEC----------CSSCCCEEEECTTSS--EEEEECTTSEEEEEECCC---
T ss_pred CCccceeEEEecC----------CCCCEEEEEECCCCC--EEEEEeCCCcEEEEECCCCcc
Confidence 9876655533211 778999999999999 899999999999999998765
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.1e-40 Score=285.79 Aligned_cols=286 Identities=11% Similarity=0.035 Sum_probs=242.0
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce---eeeeecCCCCcEEEEEEeCCCCCC-EEEEEecCCeEEEEEc-c
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ---YSGECKGHSSTVNQISFSGPSTPH-VLHSCSSDGTIRAWDT-R 112 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~i~~~~~~~~~-~l~s~~~dg~i~iwd~-~ 112 (389)
.+.|++++|+|++++|++++.|+.|++|++.+++ ....+.+|...|.+++|+|++ . +|++|+.||.|++||+ .
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT--DLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS--SEEEEEEETTSCEEEECSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC--CcEEEEEcCCCeEEEEEecc
Confidence 7889999999999999999999999999998776 344556799999999999998 8 9999999999999999 7
Q ss_pred CCeEEEEEEc--CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcC---------CceeeeeeecccCCeeEEEEecCCCC
Q 016457 113 SFHEVWSVTA--GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRN---------KKQVACLEESHVEDVTQVHFVPNNQN 181 (389)
Q Consensus 113 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~ 181 (389)
+++. ..+.. |...|.+++|+| +..+++++.|+.|++||+++ ++++..+. |...+.+++|+|++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSSE--
T ss_pred CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCCc--
Confidence 7655 67788 999999999999 99999999999999999998 77777775 88999999999874
Q ss_pred eEEEEeCCCcEEEEecCC-CCCCCccceeeeccCCceeeEEEecC-CCcEEEEEecCCcEEEEEcCCC------ceeEEe
Q 016457 182 KVVSASVDGLICTFDTGG-DINDDDLLESVINVGTSVGKVGFFGE-TNKHLWCLTHIETLSIWDWKDG------QNVASF 253 (389)
Q Consensus 182 ~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~------~~~~~~ 253 (389)
+++++.|+.|++||+++ .. .........+...+.+++|+ + ++.++++++.||.|++|++... +....+
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~i~~~-~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCED--DNGTIEESGLKYQIRDVALL-PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTT--CCCEEEECSCSSCEEEEEEC-SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred -EEEEeCCCeEEEEECCcccc--ccceeeecCCCCceeEEEEC-CCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 99999999999999995 32 11233445678899999999 6 7889999999999999999877 777777
Q ss_pred ecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEeccc-ceeeeeccCCCcc
Q 016457 254 ENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGH-TAVVRSVLPMPSV 332 (389)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~ 332 (389)
..+..... ..+|...|.+++|+|+++ +|++|+.||.|++||+.+++. +..+. +| ...|.++
T Consensus 239 ~~~~~~~~---~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~vwd~~~~~~------~~~~~-~~h~~~v~~~------ 300 (342)
T 1yfq_A 239 RCHRLNLK---DTNLAYPVNSIEFSPRHK--FLYTAGSDGIISCWNLQTRKK------IKNFA-KFNEDSVVKI------ 300 (342)
T ss_dssp ECCCCCTT---CCSSCCCEEEEEECTTTC--CEEEEETTSCEEEEETTTTEE------EEECC-CCSSSEEEEE------
T ss_pred eccccccc---ccccceeEEEEEEcCCCC--EEEEecCCceEEEEcCccHhH------hhhhh-cccCCCceEe------
Confidence 76432111 012445999999999998 889999999999999998776 56665 77 9999999
Q ss_pred cCCCCCCCceeEEEecCCCe-EEEEec
Q 016457 333 QGRPAQSHGIFGWTGGEDGR-LCCWLS 358 (389)
Q Consensus 333 ~~~~~s~~~~~l~s~~~dg~-v~iW~~ 358 (389)
+ |++++|++|+.||. .+.|..
T Consensus 301 ---~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 301 ---A--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp ---E--ECSSEEEEEEECTHHHHCSSS
T ss_pred ---c--CCCCeEEEEecCCcccccccc
Confidence 7 99999999999998 555553
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.7e-40 Score=285.30 Aligned_cols=255 Identities=14% Similarity=0.181 Sum_probs=204.9
Q ss_pred eecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe--EEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEE
Q 016457 75 ECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH--EVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQF 150 (389)
Q Consensus 75 ~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i 150 (389)
.+.+|.+.|++++|+|++ ++|++|+.|++|++||+.++. .+..+.+|...|.+++|+|+ +..|++++.|+.|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g--~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG--TRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGG--CEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCC--CEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 456899999999999999 799999999999999998775 46789999999999999753 788999999999999
Q ss_pred EECcCCc--eeeeeeecccCCeeEEEEecC--CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 151 WDWRNKK--QVACLEESHVEDVTQVHFVPN--NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 151 wd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
||+++++ .+..+. +|...|.+++|+|+ + .+|++|+.|+.|++||++... ..........|...+.+++|+|..
T Consensus 86 Wd~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g-~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 86 WREENGTWEKSHEHA-GHDSSVNSVCWAPHDYG-LILACGSSDGAISLLTYTGEG-QWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp ECCSSSCCCEEEEEC-CCSSCCCEEEECCTTTC-SCEEEECSSSCEEEEEECSSS-CEEECCBTTSSSSCBCCCEECCCC
T ss_pred EECCCCcceEEEEcc-CCCCceEEEEECCCCCC-cEEEEEcCCCCEEEEecCCCC-CcceeeeeccccCCcceEEEcccc
Confidence 9999874 556666 89999999999998 5 499999999999999998542 111123345678889999998531
Q ss_pred ----------------CcEEEEEecCCcEEEEEcCCC---ceeEEeecccccccCCccCCCCCceeeecccCCC----Ce
Q 016457 227 ----------------NKHLWCLTHIETLSIWDWKDG---QNVASFENARSLASDSWTLDDVDYFVDCHYPGEG----EN 283 (389)
Q Consensus 227 ----------------~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~ 283 (389)
+.+|++++.|+.|++||++.. +.+..+.+ |...|.+++|+|++ .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~------------h~~~V~~v~~sp~~~~~~~- 229 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA------------HSDWVRDVAWAPSIGLPTS- 229 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC------------CSSCEEEEECCCCSSCSCC-
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc------------CCCceEEEEecCCCCCCCc-
Confidence 468999999999999999755 34445554 77999999999986 5
Q ss_pred EEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 284 LWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 284 ~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|++|+.||.|++|++.+..... .....+ .+|...|.++ +|+|++++|++|+.||.|++|+...
T Consensus 230 -~las~s~D~~v~iw~~~~~~~~~--~~~~~~-~~~~~~v~~v---------~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 230 -TIASCSQDGRVFIWTCDDASSNT--WSPKLL-HKFNDVVWHV---------SWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp -EEEEEETTCEEEEEECSSTTCCC--CBCCEE-EECSSCEEEE---------EECTTTCCEEEEESSSCEEEEEECT
T ss_pred -eEEEEcCCCeEEEEEccCccccc--hhhhhh-hcCCCcEEEE---------EEcCCCCEEEEEcCCCeEEEEEECC
Confidence 78999999999999998632100 001223 3788899999 9999999999999999999999863
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-40 Score=287.96 Aligned_cols=303 Identities=11% Similarity=0.088 Sum_probs=239.8
Q ss_pred ceeeeeec-CcceEEEeecCC---CCeEEEEecCCeEEEEeCCC-ceee-eeecCCCCcEEEEEEeCCCCCCEEEEEecC
Q 016457 30 NSIQTNFG-DDYVFEIVPKND---WSLMAVSLSTNVVKLYSPVT-GQYS-GECKGHSSTVNQISFSGPSTPHVLHSCSSD 103 (389)
Q Consensus 30 ~~~~~~~~-~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~-~~~~-~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d 103 (389)
..+..+.+ .+.|++++|+|+ |++|++|+.||.|++||+.+ ++.+ ..+.+|...|.+++|+|++ ++|++++.|
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~d 107 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG--SKVFTASCD 107 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS--SEEEEEETT
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC--CEEEEEcCC
Confidence 35556666 899999999999 59999999999999999987 5444 7788899999999999998 799999999
Q ss_pred CeEEEEEccCCeEEEEEEcCCCCeEEEEE--eCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCC
Q 016457 104 GTIRAWDTRSFHEVWSVTAGSQEIFCFSF--GGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQN 181 (389)
Q Consensus 104 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 181 (389)
|.|++||+.+++.+. +..|...|.+++| +|++..+++++.||.|++||+++++.+..+. . ...+.++.+.+.
T Consensus 108 g~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~-~~~~~~~~~~~~--- 181 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-L-PERCYCADVIYP--- 181 (368)
T ss_dssp SEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-C-SSCEEEEEEETT---
T ss_pred CcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-c-CCCceEEEecCC---
Confidence 999999999988776 5568899999999 8888889999999999999999999998887 3 446777777753
Q ss_pred eEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCC----cEEEEEecCCcEEEEEcCCC---ceeEEee
Q 016457 182 KVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN----KHLWCLTHIETLSIWDWKDG---QNVASFE 254 (389)
Q Consensus 182 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~l~~~~~d~~i~i~d~~~~---~~~~~~~ 254 (389)
.+++++.++.+.+||++.......... ..+...+..+++. .+. ..+++++.|+.|++||+... ..+..+.
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~ 258 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIE--SPLKHQHRCVAIF-KDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK 258 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECC--CSCSSCEEEEEEE-ECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE
T ss_pred eeEEEeCCCcEEEEEeccccchhhhcc--ccccCCCceEEEc-ccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee
Confidence 788889999999999985421111111 1233445555554 222 23999999999999999887 5566666
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccC
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQG 334 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 334 (389)
.+...........|...|.+++|+|+++ +|++|+.||.|++||+.+++. +..+. +|...|.++
T Consensus 259 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~s~~~dg~i~iwd~~~~~~------~~~~~-~~~~~v~~~-------- 321 (368)
T 3mmy_A 259 CHRSNGTNTSAPQDIYAVNGIAFHPVHG--TLATVGSDGRFSFWDKDARTK------LKTSE-QLDQPISAC-------- 321 (368)
T ss_dssp CSEEC----CCCEEECCEEEEEECTTTC--CEEEEETTSCEEEEETTTTEE------EEECC-CCSSCEEEE--------
T ss_pred eeecccccccccccccceEEEEEecCCC--EEEEEccCCeEEEEECCCCcE------EEEec-CCCCCceEE--------
Confidence 5432111111112334799999999998 889999999999999998776 56665 899999999
Q ss_pred CCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 335 RPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|+|+|++|++|+.|+..+.|++-..
T Consensus 322 -~~s~~g~~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 322 -CFNHNGNIFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp -EECTTSSCEEEEECCCSTTCGGGCCT
T ss_pred -EECCCCCeEEEEecccccccccccCC
Confidence 99999999999999987777766544
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3e-39 Score=325.91 Aligned_cols=288 Identities=17% Similarity=0.245 Sum_probs=255.4
Q ss_pred eeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc
Q 016457 34 TNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR 112 (389)
Q Consensus 34 ~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~ 112 (389)
.+.+ .+.|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.||+|++||+.
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD--SYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEETT
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC--CEEEEEeCCCeEEEEECC
Confidence 3445 8899999999999999999999999999999999999999999999999999999 799999999999999999
Q ss_pred CCeEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 113 SFHEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 113 ~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+++.+..+..|...|.+++|+|+ ...+++++.|+.|++||+++++.+..+. +|...|++++|+|++. .+++++.||
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~sp~~~-~l~s~s~dg 765 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-GHTNSVNHCRFSPDDE-LLASCSADG 765 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-CCSSCEEEEEECSSTT-EEEEEESSS
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-CCCCCEEEEEEecCCC-EEEEEECCC
Confidence 99999999999999999999984 4467778889999999999999999998 8999999999999996 999999999
Q ss_pred cEEEEecCCCCCCCccceee-------------eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccc
Q 016457 191 LICTFDTGGDINDDDLLESV-------------INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENAR 257 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~-------------~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 257 (389)
.|++||++++. ....+ ......+.+++|+ +++..+++++ ++.+.+||+.++..+..+...
T Consensus 766 ~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~- 838 (1249)
T 3sfz_A 766 TLRLWDVRSAN----ERKSINVKRFFLSSEDPPEDVEVIVKCCSWS-ADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTG- 838 (1249)
T ss_dssp EEEEEEGGGTE----EEEEEECCCCC--------CCCCCBCCCCBC-TTSSEEEEEE-TTEEEEEETTTCCEEEEEECS-
T ss_pred eEEEEeCCCCc----ccceecccccccccCCccccccceEEEEEEC-CCCCEEEEEc-CCcEEEEEecCCCceeEEcCC-
Confidence 99999998542 11111 1123478899999 7788888776 689999999999888777632
Q ss_pred ccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCC
Q 016457 258 SLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPA 337 (389)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 337 (389)
|...+.+++|+|++. ++++++.||.|++|++.++.. +..+. +|...|.++ +|
T Consensus 839 ----------~~~~v~~~~~sp~~~--~l~~~~~dg~v~vwd~~~~~~------~~~~~-~h~~~v~~v---------~~ 890 (1249)
T 3sfz_A 839 ----------HHSTIQYCDFSPYDH--LAVIALSQYCVELWNIDSRLK------VADCR-GHLSWVHGV---------MF 890 (1249)
T ss_dssp ----------SSSCCCEEEECSSTT--EEEEECSSSCEEEEETTTTEE------EEEEC-CCSSCEEEE---------EE
T ss_pred ----------CCCceEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCce------eeecC-CCccceEEE---------EE
Confidence 778999999999999 889999999999999998765 55564 999999999 99
Q ss_pred CCCceeEEEecCCCeEEEEeccC
Q 016457 338 QSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 338 s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|+|++|++++.||.|++|++..
T Consensus 891 spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 891 SPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEEHHH
T ss_pred CCCCCEEEEEeCCCeEEEEEccc
Confidence 99999999999999999999764
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.5e-39 Score=303.53 Aligned_cols=277 Identities=16% Similarity=0.183 Sum_probs=238.3
Q ss_pred CCeEEEEecC------ceeeeeec-Ccc-eEEEeecC--CCCeEEEEecCCeEEEEeCCCc--------eeeeeecCCCC
Q 016457 20 VNSIKRFGLK------NSIQTNFG-DDY-VFEIVPKN--DWSLMAVSLSTNVVKLYSPVTG--------QYSGECKGHSS 81 (389)
Q Consensus 20 ~~~i~~w~~~------~~~~~~~~-~~~-v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~--------~~~~~~~~~~~ 81 (389)
++.|++|++. +....+.+ .+. |++++|+| ++++|++|+.||.|++||+.++ +....+..|..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~ 117 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG 117 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc
Confidence 7899999986 35666776 788 99999999 9999999999999999999754 67778888999
Q ss_pred cEEEEEEeCCCCCCEEEEEecC----CeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECcCC
Q 016457 82 TVNQISFSGPSTPHVLHSCSSD----GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWRNK 156 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~ 156 (389)
.|.+++|+|++ ++|++++.+ +.|.+|| .++.+..+..|...|.+++|+|++. .+++++.|+.|++||++++
T Consensus 118 ~v~~~~~s~~~--~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~ 193 (615)
T 1pgu_A 118 PISDISWDFEG--RRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF 193 (615)
T ss_dssp CEEEEEECTTS--SEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB
T ss_pred cEEEEEEeCCC--CEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc
Confidence 99999999999 799999987 6888888 6778889999999999999999987 6888888999999999999
Q ss_pred ceeeeeeecccC---CeeEEEEecC-CCCeEEEEeCCCcEEEEecCCCCCCCccceee-e---ccCCceeeEEEecCCCc
Q 016457 157 KQVACLEESHVE---DVTQVHFVPN-NQNKVVSASVDGLICTFDTGGDINDDDLLESV-I---NVGTSVGKVGFFGETNK 228 (389)
Q Consensus 157 ~~~~~~~~~~~~---~v~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~ 228 (389)
+.+..+. .|.. .|++++|+|+ +. +|++++.|+.|++||++++ ..+..+ . .|...|.+++|+ ++.
T Consensus 194 ~~~~~~~-~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~~v~~~~~~--~~~ 265 (615)
T 1pgu_A 194 KFSASDR-THHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSG----EFLKYIEDDQEPVQGGIFALSWL--DSQ 265 (615)
T ss_dssp EEEEEEC-SSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTTC----CEEEECCBTTBCCCSCEEEEEES--SSS
T ss_pred ceeeeec-ccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCC----CEeEEecccccccCCceEEEEEc--CCC
Confidence 9999988 8888 9999999999 85 9999999999999999854 344444 4 788999999998 778
Q ss_pred EEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCcccc
Q 016457 229 HLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATI 308 (389)
Q Consensus 229 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~ 308 (389)
+|++++.|+.|++||+.+++.+..+..... .+...+..+.|. +++ ++++++.||.|++||+.+++.
T Consensus 266 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~--~l~~~~~~g~i~~~d~~~~~~--- 331 (615)
T 1pgu_A 266 KFATVGADATIRVWDVTTSKCVQKWTLDKQ--------QLGNQQVGVVAT-GNG--RIISLSLDGTLNFYELGHDEV--- 331 (615)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCTT--------CGGGCEEEEEEE-ETT--EEEEEETTSCEEEEETTEEEE---
T ss_pred EEEEEcCCCcEEEEECCCCcEEEEEcCCCC--------cccCceeEEEeC-CCC--eEEEEECCCCEEEEECCCCcE---
Confidence 999999999999999999999888875320 023667788886 677 889999999999999988665
Q ss_pred CCCeEEEecccceeeeec
Q 016457 309 GPPEAVLVGGHTAVVRSV 326 (389)
Q Consensus 309 ~~~~~~~~~~h~~~v~~~ 326 (389)
+..+. +|...|.++
T Consensus 332 ---~~~~~-~~~~~v~~~ 345 (615)
T 1pgu_A 332 ---LKTIS-GHNKGITAL 345 (615)
T ss_dssp ---EEEEC-CCSSCEEEE
T ss_pred ---EEEEe-CCCCCEEEE
Confidence 45554 788888887
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-39 Score=288.69 Aligned_cols=280 Identities=13% Similarity=0.116 Sum_probs=235.7
Q ss_pred CCccccCCCCeEEEEecCc--------eeeeeec-CcceEEEeecCC----C---CeEEEEecCCeEEEEeCCCcee---
Q 016457 12 PKSQSCDNVNSIKRFGLKN--------SIQTNFG-DDYVFEIVPKND----W---SLMAVSLSTNVVKLYSPVTGQY--- 72 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~--------~~~~~~~-~~~v~~~~~~~~----~---~~l~~~~~d~~i~iw~~~~~~~--- 72 (389)
...++++.|+.|++|++.. .+..+.+ ...|.+++|+|+ + ++|++++.|+.|++||+.+++.
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 106 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc
Confidence 5678899999999999863 4666666 889999999999 9 9999999999999999998876
Q ss_pred --eeeecCC-----CCcEEEEEEe----CCCCCCE-EEEEecCCeEEEEEccC------CeEEE-----EEEc-------
Q 016457 73 --SGECKGH-----SSTVNQISFS----GPSTPHV-LHSCSSDGTIRAWDTRS------FHEVW-----SVTA------- 122 (389)
Q Consensus 73 --~~~~~~~-----~~~v~~i~~~----~~~~~~~-l~s~~~dg~i~iwd~~~------~~~~~-----~~~~------- 122 (389)
+..+..| ...|.+++|+ |++ .+ |++++.||.|++||+.+ ++.+. .+..
T Consensus 107 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSFWALKWGASNDRLL--SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 184 (397)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS
T ss_pred ccceeecccccccCCCcEEEEEEeeccCCCC--ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccC
Confidence 7888888 5899999999 888 68 99999999999999998 66655 6743
Q ss_pred CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeec---c---cCCeeEEEEecCCCCeEEEEeCC---CcEE
Q 016457 123 GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES---H---VEDVTQVHFVPNNQNKVVSASVD---GLIC 193 (389)
Q Consensus 123 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~l~~~~~d---~~i~ 193 (389)
|...|.+++|+|++ .+++++.|+.|++||+++++.+..+. . | ...|.+++|+|++. +|++++.| +.|+
T Consensus 185 ~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 185 PSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-SQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCIT 261 (397)
T ss_dssp SCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEE
T ss_pred CCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe-ccccccccCCccceEEECCCCC-EEEEEecCCCCceEE
Confidence 78899999999999 88888889999999999999998888 7 8 99999999999995 99999999 9999
Q ss_pred EEecCCCCCCCccceeeec-------------cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee------
Q 016457 194 TFDTGGDINDDDLLESVIN-------------VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE------ 254 (389)
Q Consensus 194 i~d~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------ 254 (389)
+||++++ ..+..+.. |...|.+++|+ +++.+|++++.|+.|++||+.+++.+..+.
T Consensus 262 i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 336 (397)
T 1sq9_A 262 LYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN-DSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 336 (397)
T ss_dssp EEETTTC----CEEEEECBC--------CCBSBSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred EEECCCC----cccceeccCcccccccccccccCCcEEEEEEC-CCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcc
Confidence 9999854 45566666 88999999999 788899999999999999999999998887
Q ss_pred cccccc---cCCccCCCCCceeeecccCCC----------CeEEEEEecCCceEEEEEeccC
Q 016457 255 NARSLA---SDSWTLDDVDYFVDCHYPGEG----------ENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 255 ~~~~~~---~~~~~~~~~~~i~~~~~~~~~----------~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
.+.... .......|...|.+++|+|++ + +|++|+.||.|++|++.++
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~--~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 337 EIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNE--SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp SSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSC--EEEEEETTTEEEEEEEEC-
T ss_pred cchhhhhccccccccccCCceeEEEeccccccccccccccc--eEEEecCCCcEEEEEcCCC
Confidence 320000 000000127899999999998 5 7899999999999999875
No 79
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.3e-39 Score=304.53 Aligned_cols=276 Identities=19% Similarity=0.277 Sum_probs=225.9
Q ss_pred CccccCCCCeEEEEecCc-------eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEE
Q 016457 13 KSQSCDNVNSIKRFGLKN-------SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVN 84 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~-------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~ 84 (389)
..++++.|++|++|++.. ....+.+ ...|.+++|+|++++|++|+.|++|+|||+.+++....+.+|...|.
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~ 476 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL 476 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE
Confidence 578999999999999853 3445666 88999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEE---EcCCCCeEEEEEeCCC--CeEEEeecCCeEEEEECcCCcee
Q 016457 85 QISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV---TAGSQEIFCFSFGGST--DYLLAAGCGSQIQFWDWRNKKQV 159 (389)
Q Consensus 85 ~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~ 159 (389)
+++|+|++ .+|++|+.|++|++||+......... .+|...|.+++|+|++ ..+++++.|+.|++||+++++..
T Consensus 477 ~~~~s~~~--~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 477 SVAFSLDN--RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLR 554 (694)
T ss_dssp EEEECTTS--SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEeCCC--CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEE
Confidence 99999999 79999999999999998754433322 3577889999999876 56888889999999999999999
Q ss_pred eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcE
Q 016457 160 ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETL 239 (389)
Q Consensus 160 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i 239 (389)
..+. +|...|++++|+|++. +|++++.||.|++||++++. .+.. ..+...+.+++|+ +++.+++++ .++.|
T Consensus 555 ~~~~-~h~~~v~~v~~spdg~-~l~sg~~Dg~i~iwd~~~~~----~~~~-~~~~~~v~~~~~s-p~~~~l~~~-~~~~i 625 (694)
T 3dm0_A 555 STLA-GHTGYVSTVAVSPDGS-LCASGGKDGVVLLWDLAEGK----KLYS-LEANSVIHALCFS-PNRYWLCAA-TEHGI 625 (694)
T ss_dssp EEEC-CCSSCEEEEEECTTSS-EEEEEETTSBCEEEETTTTE----EEEC-CBCSSCEEEEEEC-SSSSEEEEE-ETTEE
T ss_pred EEEc-CCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc----eEEE-ecCCCcEEEEEEc-CCCcEEEEE-cCCCE
Confidence 8888 8999999999999995 99999999999999999652 2322 2356689999999 666666555 56679
Q ss_pred EEEEcCCCceeEEeecccccccC-------CccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 240 SIWDWKDGQNVASFENARSLASD-------SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 240 ~i~d~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++||+++++.+..+......... .....+...+.+++|+|+|+ +|++|+.||.|++|++.
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~--~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS--TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS--EEEEEETTSEEEEEEC-
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC--EEEEEcCCCeEEEEecc
Confidence 99999999888777532111000 00011223578899999999 89999999999999986
No 80
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-39 Score=285.92 Aligned_cols=270 Identities=16% Similarity=0.256 Sum_probs=228.8
Q ss_pred ccccCCCCeEEEEecC--ceeeeeec------CcceEEEeecCC----CCeEEEEecCCeEEEEeCCCceeeeeecCCCC
Q 016457 14 SQSCDNVNSIKRFGLK--NSIQTNFG------DDYVFEIVPKND----WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSS 81 (389)
Q Consensus 14 ~~s~~~~~~i~~w~~~--~~~~~~~~------~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 81 (389)
...++.++.|++|+.. +.+..+.. ...|++++|+|+ +.+|++|+.||.|++||+.+++.+..+.+|..
T Consensus 37 ~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 116 (366)
T 3k26_A 37 VFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGN 116 (366)
T ss_dssp EEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCS
T ss_pred EEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCC
Confidence 4455567799999986 34444432 477999999999 67999999999999999999999999999999
Q ss_pred cEEEEEEeC-CCCCCEEEEEecCCeEEEEEccCCeEEEEE---EcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc
Q 016457 82 TVNQISFSG-PSTPHVLHSCSSDGTIRAWDTRSFHEVWSV---TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 82 ~v~~i~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
.|.+++|+| ++ .+|++++.||.|++||+++++.+..+ ..|...|.+++|+|++..+++++.||.|++||+++++
T Consensus 117 ~i~~~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 117 AINELKFHPRDP--NLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp CEEEEEECSSCT--TEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred cEEEEEECCCCC--CEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 999999999 77 79999999999999999999999888 6789999999999999999999999999999999876
Q ss_pred eeeeee---------------------------ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC-------
Q 016457 158 QVACLE---------------------------ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND------- 203 (389)
Q Consensus 158 ~~~~~~---------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------- 203 (389)
.+..+. ..|...|.+++|+ + .++++++.|+.|++||+++....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 271 (366)
T 3k26_A 195 MMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPS 271 (366)
T ss_dssp HHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTT
T ss_pred cccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccC
Confidence 554433 1288999999999 4 49999999999999999865321
Q ss_pred ---CccceeeeccCCceeeEEEecCC--CcEEEEEecCCcEEEEEcCCCcee----EEeecccccccCCccCCCCCceee
Q 016457 204 ---DDLLESVINVGTSVGKVGFFGET--NKHLWCLTHIETLSIWDWKDGQNV----ASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 204 ---~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
...+..+..|...|.+++|+ ++ +.+|++++.||.|++||+.+++.. ..+..+. |...|.+
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s-~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~----------~~~~v~~ 340 (366)
T 3k26_A 272 ESNVTILGRFDYSQCDIWYMRFS-MDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHK----------CGAAIRQ 340 (366)
T ss_dssp CCCEEEEEEEECSSCCSSCCCCE-ECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTT----------CCSCEEE
T ss_pred CcchheeccccccCCcEEEEEEc-CCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccc----------cCCceEE
Confidence 12355666788899999999 56 889999999999999999987543 3555432 4689999
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEec
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++|+|+++ +|++++.||.|++||+.
T Consensus 341 ~~~s~~~~--~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 341 TSFSRDSS--ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSS--EEEEEETTSEEEEEEC-
T ss_pred EEeCCCCC--eEEEEeCCCEEEEEEec
Confidence 99999999 89999999999999985
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.6e-38 Score=284.07 Aligned_cols=278 Identities=18% Similarity=0.307 Sum_probs=241.6
Q ss_pred eeeeec-Ccc-eEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 32 IQTNFG-DDY-VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 32 ~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
...+.+ .+. +.++++ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ + +++++|+.||+|++|
T Consensus 111 ~~~l~~h~~~v~~~~~~--~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~--~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--D--NIIISGSTDRTLKVW 184 (445)
T ss_dssp CEEEECSTTSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--T--TEEEEEETTSCEEEE
T ss_pred eEEecccCCCcEEEEEE--cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--C--CEEEEEeCCCeEEEE
Confidence 445666 444 565554 68899999999999999999999999999999999999998 3 599999999999999
Q ss_pred EccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC
Q 016457 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189 (389)
Q Consensus 110 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 189 (389)
|+.+++.+..+.+|...|.+++|+ ++.+++++.||.|++||+++++.+..+. +|...|.++++ ++ ..+++++.|
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~--~~-~~l~~~~~d 258 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQY--DG-RRVVSGAYD 258 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEE--CS-SCEEEEETT
T ss_pred ECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEE--CC-CEEEEEcCC
Confidence 999999999999999999999996 5789999999999999999999999998 89999999999 45 489999999
Q ss_pred CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCC
Q 016457 190 GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDV 269 (389)
Q Consensus 190 ~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (389)
|.|++||++++ ..+..+..|...|.++.| ++.++++++.|+.|++||+.+++.+..+.. |.
T Consensus 259 g~i~iwd~~~~----~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------~~ 319 (445)
T 2ovr_B 259 FMVKVWDPETE----TCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTG------------HQ 319 (445)
T ss_dssp SCEEEEEGGGT----EEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECC------------CC
T ss_pred CEEEEEECCCC----cEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcC------------Cc
Confidence 99999999854 556677788899999998 467899999999999999999999988876 55
Q ss_pred CceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec--ccceeeeeccCCCcccCCCCCCCceeEEEe
Q 016457 270 DYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG--GHTAVVRSVLPMPSVQGRPAQSHGIFGWTG 347 (389)
Q Consensus 270 ~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~ 347 (389)
..+.++.++ ++ ++++|+.||.|++||+.+++. +..+.. .|...|.++ +|+ +.+|++|
T Consensus 320 ~~v~~~~~~--~~--~l~~~~~dg~i~vwd~~~~~~------~~~~~~~~~~~~~v~~~---------~~~--~~~l~s~ 378 (445)
T 2ovr_B 320 SLTSGMELK--DN--ILVSGNADSTVKIWDIKTGQC------LQTLQGPNKHQSAVTCL---------QFN--KNFVITS 378 (445)
T ss_dssp SCEEEEEEE--TT--EEEEEETTSCEEEEETTTCCE------EEEECSTTSCSSCEEEE---------EEC--SSEEEEE
T ss_pred ccEEEEEEe--CC--EEEEEeCCCeEEEEECCCCcE------EEEEccCCCCCCCEEEE---------EEC--CCEEEEE
Confidence 778877775 45 889999999999999988765 555541 278889999 774 5789999
Q ss_pred cCCCeEEEEeccCC
Q 016457 348 GEDGRLCCWLSDDS 361 (389)
Q Consensus 348 ~~dg~v~iW~~~~~ 361 (389)
+.||.|++|++...
T Consensus 379 ~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 379 SDDGTVKLWDLKTG 392 (445)
T ss_dssp ETTSEEEEEETTTC
T ss_pred eCCCeEEEEECCCC
Confidence 99999999999876
No 82
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.7e-39 Score=280.76 Aligned_cols=293 Identities=13% Similarity=0.171 Sum_probs=220.0
Q ss_pred eec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc----eeeeeecCCCCcEEEEEEeC--CCCCCEEEEEecCCeEE
Q 016457 35 NFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG----QYSGECKGHSSTVNQISFSG--PSTPHVLHSCSSDGTIR 107 (389)
Q Consensus 35 ~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~~~--~~~~~~l~s~~~dg~i~ 107 (389)
+.+ .+.|++++|+|++++|++|+.||.|++||+.++ +....+.+|...|.+++|+| ++ .+|++++.||.|+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~--~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYG--RIIASASYDKTVK 84 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGC--SEEEEEETTSCEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCC--CEEEEEcCCCeEE
Confidence 344 789999999999999999999999999999876 46677789999999999999 46 7999999999999
Q ss_pred EEEccCC---------eEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCceeeeee------------e
Q 016457 108 AWDTRSF---------HEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQVACLE------------E 164 (389)
Q Consensus 108 iwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~------------~ 164 (389)
+||+.++ +.+..+..|...|.+++|+|+ +..+++++.||.|++||+++++.+..+. .
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999877 668888899999999999998 8899999999999999999887654433 1
Q ss_pred cccCCeeEEEEecC---CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCC----cEEEEEecCC
Q 016457 165 SHVEDVTQVHFVPN---NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN----KHLWCLTHIE 237 (389)
Q Consensus 165 ~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~l~~~~~d~ 237 (389)
.|...+.+++|+|+ + ..+++++.++.+.+|+...+ ....+..+..|...|.+++|+ +++ .+|++++.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~-~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~i~~~~~~-p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSP-EKLAVSALEQAIIYQRGKDG--KLHVAAKLPGHKSLIRSISWA-PSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SCSCCCEEEEECCCSSSC-CEEEEEETTEEEEEEECTTS--CEEEEEECCCCCSCEEEEEEC-CCSSCSSEEEEEEETTS
T ss_pred CcccceeEEEeccCCCCC-cEEEEecCCCcEEEEccCCC--ceeeeeecCCCCcceeEEEEC-CCCCCcceEEEEEcCCC
Confidence 57788999999997 6 49999999999988877743 122355666789999999999 555 7999999999
Q ss_pred cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe----cCCceEEEEEeccCCccccCCCeE
Q 016457 238 TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG----TGAGTVGYFPVNYGGAATIGPPEA 313 (389)
Q Consensus 238 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g----~~dg~i~i~~~~~~~~~~~~~~~~ 313 (389)
.|++||++.+........ +..........+... ++..+ .....+.+|+....+. +.
T Consensus 241 ~i~iwd~~~~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 300 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEE------------SLTNSNMFDNSADVD--MDAQGRSDSNTEEKAELQSNLQVEL------LS 300 (351)
T ss_dssp CEEEEEEEECC-----------------------------------------------------CCSEEEEE------EE
T ss_pred eEEEEeCCCCcCccccCC------------cccceeccCCCcccc--cccccccccccceeeeecccccccE------EE
Confidence 999999987655443332 112222333333322 22333 2334455555554443 45
Q ss_pred EEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCcc
Q 016457 314 VLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSE 363 (389)
Q Consensus 314 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~~ 363 (389)
.+. +|...|+++ +|+|++++|++|+.||.|++|++....+
T Consensus 301 ~~~-~h~~~v~~~---------~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 301 EHD-DHNGEVWSV---------SWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEC-TTSSCEEEE---------EECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred EEe-cccccEEEE---------EEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 554 899999999 9999999999999999999999987543
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-39 Score=280.00 Aligned_cols=247 Identities=15% Similarity=0.195 Sum_probs=205.7
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce--eeeeecCCCCcEEEEEEeCC--CCCCEEEEEecCCeEEEEEccC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ--YSGECKGHSSTVNQISFSGP--STPHVLHSCSSDGTIRAWDTRS 113 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~~~l~s~~~dg~i~iwd~~~ 113 (389)
.+.|++++|+|+|++||+|+.|++|+|||+.+++ .+..+.+|...|.+++|+++ + ++|++|+.|++|++||+++
T Consensus 13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~--~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG--NILASCSYDRKVIIWREEN 90 (316)
T ss_dssp -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS--SCEEEEETTSCEEEECCSS
T ss_pred cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC--CEEEEEECCCEEEEEECCC
Confidence 7899999999999999999999999999998764 46788999999999999864 5 6999999999999999998
Q ss_pred C--eEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCce---eeeeeecccCCeeEEEEecCC-------
Q 016457 114 F--HEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQ---VACLEESHVEDVTQVHFVPNN------- 179 (389)
Q Consensus 114 ~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~------- 179 (389)
+ +....+.+|...|.+++|+|+ +..+++++.|+.|++||++.+.. ...+. +|...+.+++|+|+.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN-AHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT-SSSSCBCCCEECCCCCC-----
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec-cccCCcceEEEccccCCccccc
Confidence 7 466778889999999999997 66888888999999999987632 33444 789999999999973
Q ss_pred ---------CCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC---CcEEEEEecCCcEEEEEcCCC
Q 016457 180 ---------QNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET---NKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 180 ---------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~ 247 (389)
..+|++|+.|+.|++||++... .......+..|...|.+++|+|.. +.+|++++.|++|++|++.+.
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDG-QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTS-CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCC-ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 1389999999999999997431 113445667899999999999432 378999999999999998763
Q ss_pred c----eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 248 Q----NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 248 ~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
. ....+.. |...|.+++|+|+++ +|++++.||.|++|+...
T Consensus 249 ~~~~~~~~~~~~------------~~~~v~~v~~sp~g~--~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 249 SSNTWSPKLLHK------------FNDVVWHVSWSITAN--ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp TCCCCBCCEEEE------------CSSCEEEEEECTTTC--CEEEEESSSCEEEEEECT
T ss_pred cccchhhhhhhc------------CCCcEEEEEEcCCCC--EEEEEcCCCeEEEEEECC
Confidence 1 1222332 668999999999999 889999999999999863
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=280.85 Aligned_cols=256 Identities=16% Similarity=0.253 Sum_probs=219.0
Q ss_pred eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCC--CceeeeeecCCCCcEEEEEEeCC--CCCCEEEEEecCCe
Q 016457 31 SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV--TGQYSGECKGHSSTVNQISFSGP--STPHVLHSCSSDGT 105 (389)
Q Consensus 31 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~~~l~s~~~dg~ 105 (389)
.+..+.+ .+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|...|.+++|+++ + .+|++++.||.
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--~~l~s~~~dg~ 80 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG--TILASCSYDGK 80 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC--SEEEEEETTSC
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC--CEEEEeccCCE
Confidence 3455666 8899999999999999999999999999998 56778889999999999999977 6 79999999999
Q ss_pred EEEEEccCCe--EEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCce--eeeeeecccCCeeEEEEec--
Q 016457 106 IRAWDTRSFH--EVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKKQ--VACLEESHVEDVTQVHFVP-- 177 (389)
Q Consensus 106 i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~-- 177 (389)
|++||+.+++ .+..+..|...|.+++|+|+ +..+++++.|+.|++||+++... ...+. .|...|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcCcc
Confidence 9999999987 77788889999999999998 88999999999999999998743 34454 7999999999999
Q ss_pred -----------CCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC---CcEEEEEecCCcEEEEE
Q 016457 178 -----------NNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET---NKHLWCLTHIETLSIWD 243 (389)
Q Consensus 178 -----------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~i~d 243 (389)
++ .+|++++.|+.|++||++++.........+..|...|.+++|+ ++ +.+|++++.|+.|++||
T Consensus 160 ~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s-p~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 160 IEEDGEHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS-PTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ----------CTT-CEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC-CCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccccCCCCC-CEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC-CCCCCCCeEEEEeCCCEEEEEe
Confidence 46 4999999999999999986543344556677889999999999 55 89999999999999999
Q ss_pred cCCCce---eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 244 WKDGQN---VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 244 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+.++.. ...+... .|...+.+++|+|+++ +|++++.||.|++|++...
T Consensus 238 ~~~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~g~--~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEE----------KFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp ESSTTSCCEEEESSSS----------CCSSCEEEEEECSSSC--CEEEEESSSSEEEEEEEET
T ss_pred CCCCCccceeeeeccc----------cCCCcEEEEEEcCCCC--EEEEecCCCcEEEEeCCCC
Confidence 988642 2222221 1668899999999999 8899999999999999854
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.7e-38 Score=272.60 Aligned_cols=276 Identities=18% Similarity=0.272 Sum_probs=229.8
Q ss_pred CccccCCCCeEEEEecCc-------eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEE
Q 016457 13 KSQSCDNVNSIKRFGLKN-------SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVN 84 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~-------~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~ 84 (389)
..+|++.|++|++|++.. +...+.+ ...|.+++|+|++++|++|+.|+.|++|+............+...+.
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~ 132 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL 132 (340)
T ss_dssp EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee
Confidence 578999999999999852 4556666 88999999999999999999999999999999988888888899999
Q ss_pred EEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE-EEEEcCCCCeEEEEEeCCC--CeEEEeecCCeEEEEECcCCceeee
Q 016457 85 QISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV-WSVTAGSQEIFCFSFGGST--DYLLAAGCGSQIQFWDWRNKKQVAC 161 (389)
Q Consensus 85 ~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~ 161 (389)
.+.+++++ .+|++++.|+.+++||+...... .....|...+.+++|++++ ..+++++.|+.|++||+++++.+..
T Consensus 133 ~~~~~~~~--~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~ 210 (340)
T 4aow_A 133 SVAFSSDN--RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN 210 (340)
T ss_dssp EEEECTTS--SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEeecC--ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE
Confidence 99999998 79999999999999999765543 3445678899999998764 3566777899999999999999999
Q ss_pred eeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEE
Q 016457 162 LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI 241 (389)
Q Consensus 162 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i 241 (389)
+. +|...|++++|+|++. +|++|+.|+.|++||+++. ..+.. ..+...+..++|+ +++ .+++++.|+.|++
T Consensus 211 ~~-~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~----~~~~~-~~~~~~v~~~~~~-~~~-~~~~~~~d~~i~i 281 (340)
T 4aow_A 211 HI-GHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEG----KHLYT-LDGGDIINALCFS-PNR-YWLCAATGPSIKI 281 (340)
T ss_dssp EC-CCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTT----EEEEE-EECSSCEEEEEEC-SSS-SEEEEEETTEEEE
T ss_pred ec-CCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccC----ceeee-ecCCceEEeeecC-CCC-ceeeccCCCEEEE
Confidence 88 8999999999999996 9999999999999999954 33333 3456789999998 555 4667778999999
Q ss_pred EEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 242 WDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 242 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
||++++..+..+....... ....|...|.+++|+|+++ +|++|+.||.|+|||+.+|.
T Consensus 282 wd~~~~~~~~~~~~~~~~~---~~~~h~~~v~~l~~s~dg~--~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVIST---SSKAEPPQCTSLAWSADGQ--TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTTTEEEEEECCC----------CCCCCEEEEEECTTSS--EEEEEETTSCEEEEEEEC--
T ss_pred EECCCCeEEEeccccceee---eccCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEeCCCcC
Confidence 9999888877765422111 1113778999999999999 89999999999999999874
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-37 Score=277.74 Aligned_cols=262 Identities=19% Similarity=0.241 Sum_probs=224.2
Q ss_pred CCCeEEEEecC--ceeeeee--c-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCC
Q 016457 19 NVNSIKRFGLK--NSIQTNF--G-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPST 93 (389)
Q Consensus 19 ~~~~i~~w~~~--~~~~~~~--~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 93 (389)
.|++|++||.. +....+. + ...|++++|+|+|++||+|+.||.|+|||+++++.+..+.+|...+.++.++ +
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~- 199 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--S- 199 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--T-
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--C-
Confidence 48999999986 3455444 3 6789999999999999999999999999999999999999999999999886 3
Q ss_pred CCEEEEEecCCeEEEEEccC-CeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce----eeeeeecccC
Q 016457 94 PHVLHSCSSDGTIRAWDTRS-FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ----VACLEESHVE 168 (389)
Q Consensus 94 ~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~ 168 (389)
.+|++|+.|+.+++||... ...+..+.+|...+..+.++|.+..+++++.|+.|++||..+++. +.... .|..
T Consensus 200 -~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~ 277 (420)
T 4gga_A 200 -YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQG 277 (420)
T ss_dssp -TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSS
T ss_pred -CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeec-ccCC
Confidence 5899999999999999886 456778899999999999999999999999999999999987653 34444 7889
Q ss_pred CeeEEEEecCCCCeEEEE--eCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe--cCCcEEEEEc
Q 016457 169 DVTQVHFVPNNQNKVVSA--SVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT--HIETLSIWDW 244 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~i~i~d~ 244 (389)
.|.+++|+|.+.++++++ +.|+.|++||++++. .. ....+...+.++.|+ +++..+++++ .|+.|++||+
T Consensus 278 ~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~----~~-~~~~~~~~v~~~~~~-~~~~~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 278 AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA----CL-SAVDAHSQVCSILWS-PHYKELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE----EE-EEEECSSCEEEEEEE-TTTTEEEEEECTTTCCEEEEET
T ss_pred ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc----cc-eeeccccceeeeeec-CCCCeEEEEEecCCCEEEEEEC
Confidence 999999999987777764 479999999999652 33 334456788999999 5556666554 6899999999
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
.+++++..+.+ |...|.+++|+|+|+ +|++|+.||+|+|||+.....
T Consensus 352 ~~~~~v~~l~g------------H~~~V~~l~~spdg~--~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 352 PTMAKVAELKG------------HTSRVLSLTMSPDGA--TVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp TTCCEEEEECC------------CSSCEEEEEECTTSS--CEEEEETTTEEEEECCSCSSC
T ss_pred CCCcEEEEEcC------------CCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCCCCc
Confidence 99999999987 779999999999999 889999999999999976543
No 87
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-38 Score=277.76 Aligned_cols=258 Identities=14% Similarity=0.223 Sum_probs=217.0
Q ss_pred ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc--CCeEEEEEEcCCCCeEEEEEeCC--CCeEEEeecC
Q 016457 70 GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR--SFHEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCG 145 (389)
Q Consensus 70 ~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d 145 (389)
|+++..+.+|...|++++|+|++ ++|++|+.||.|++||+. +++.+..+..|...|++++|+|+ +..+++++.|
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d 78 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYG--KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD 78 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSS--SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCccEEecCCcccEEEEEEcCCC--CEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC
Confidence 45677889999999999999999 799999999999999998 66778889999999999999877 8899999999
Q ss_pred CeEEEEECcCCc--eeeeeeecccCCeeEEEEecC--CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEE
Q 016457 146 SQIQFWDWRNKK--QVACLEESHVEDVTQVHFVPN--NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVG 221 (389)
Q Consensus 146 ~~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (389)
|.|++||+++++ .+..+. .|...|.+++|+|+ +. +|++++.|+.|++||+++.. ......+..|...|.+++
T Consensus 79 g~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENG--TTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp SCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTS--CCCEEEEECCTTCEEEEE
T ss_pred CEEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCC--ceeeEEecCCCCceEEEE
Confidence 999999999887 666666 79999999999999 74 99999999999999999642 233445667889999999
Q ss_pred EecC------------CCcEEEEEecCCcEEEEEcCCCcee----EEeecccccccCCccCCCCCceeeecccCC---CC
Q 016457 222 FFGE------------TNKHLWCLTHIETLSIWDWKDGQNV----ASFENARSLASDSWTLDDVDYFVDCHYPGE---GE 282 (389)
Q Consensus 222 ~~~~------------~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~ 282 (389)
|+|. ++.+|++++.|+.|++||++++... ..+.. |...|.+++|+|+ ++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------h~~~v~~~~~sp~~~~~~ 222 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRS 222 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSE
T ss_pred EcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec------------ccCcEeEEEECCCCCCCC
Confidence 9953 6889999999999999999876533 34443 7799999999999 66
Q ss_pred eEEEEEecCCceEEEEEeccCCccccCCCeEEEe--cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 283 NLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV--GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 283 ~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
+|++++.||.|++||+.++... ....+. ..|...|.++ +|+|++++|++++.||.|++|++..
T Consensus 223 --~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~v~~~---------~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 223 --YLASVSQDRTCIIWTQDNEQGP----WKKTLLKEEKFPDVLWRA---------SWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp --EEEEEETTSCEEEEEESSTTSC----CEEEESSSSCCSSCEEEE---------EECSSSCCEEEEESSSSEEEEEEEE
T ss_pred --eEEEEeCCCEEEEEeCCCCCcc----ceeeeeccccCCCcEEEE---------EEcCCCCEEEEecCCCcEEEEeCCC
Confidence 8899999999999999986420 012222 2377889999 9999999999999999999999984
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-37 Score=271.16 Aligned_cols=269 Identities=12% Similarity=0.127 Sum_probs=236.9
Q ss_pred CCccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEE
Q 016457 12 PKSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~ 88 (389)
...++++.|+.|++|++. +.+..+.+ ...|.+++|+|++++|++++.||.|++||+.+++.+..+. |...|.+++|
T Consensus 45 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~ 123 (369)
T 3zwl_B 45 DLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEF 123 (369)
T ss_dssp CEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEE
Confidence 357788899999999975 56677776 8899999999999999999999999999999999988888 8899999999
Q ss_pred eCCCCCCEEEEEecC-----CeEEEEEccCCe-----------EEEEEEcCCC--CeEEEEEeCCCCeEEEeecCCeEEE
Q 016457 89 SGPSTPHVLHSCSSD-----GTIRAWDTRSFH-----------EVWSVTAGSQ--EIFCFSFGGSTDYLLAAGCGSQIQF 150 (389)
Q Consensus 89 ~~~~~~~~l~s~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~i 150 (389)
+|++ .++++++.+ +.|++||+.... .+..+..|.. .+.+++|+|++..+++++.||.|++
T Consensus 124 ~~~~--~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i 201 (369)
T 3zwl_B 124 SPCG--NYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISK 201 (369)
T ss_dssp CTTS--SEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEE
T ss_pred ccCC--CEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEE
Confidence 9999 799999998 999999998653 3445556655 9999999999999999999999999
Q ss_pred EECcC-CceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcE
Q 016457 151 WDWRN-KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKH 229 (389)
Q Consensus 151 wd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 229 (389)
||+++ .+.+..+. .|...|.+++|+|++. +|++++.|+.|++||++++. .+. ...+...+..++|+ +++.+
T Consensus 202 ~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~----~~~-~~~~~~~~~~~~~~-~~~~~ 273 (369)
T 3zwl_B 202 YDVSNNYEYVDSID-LHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTLQ----VLK-KYETDCPLNTAVIT-PLKEF 273 (369)
T ss_dssp EETTTTTEEEEEEE-CCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC----EEE-EEECSSCEEEEEEC-SSSSE
T ss_pred EECCCCcEeEEEEe-cCCCceeEEEECCCCC-EEEEecCCceEEEEECCCCc----eee-eecCCCCceeEEec-CCCce
Confidence 99998 67777887 8999999999999995 99999999999999999542 333 33478899999999 78889
Q ss_pred EEEEecCC--------------cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceE
Q 016457 230 LWCLTHIE--------------TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTV 295 (389)
Q Consensus 230 l~~~~~d~--------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i 295 (389)
+++++.++ .+++||..+++.+..+.. |...|.+++|+|+++ +|++++.||.|
T Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~------------~~~~v~~~~~s~~~~--~l~s~~~dg~v 339 (369)
T 3zwl_B 274 IILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG------------HFGPLNTVAISPQGT--SYASGGEDGFI 339 (369)
T ss_dssp EEEEECCC-------------CEEEEEETTTCCEEEEEEC------------CSSCEEEEEECTTSS--EEEEEETTSEE
T ss_pred EEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec------------ccCcEEEEEECCCCC--EEEEEcCCCeE
Confidence 99999888 899999999999998887 669999999999999 89999999999
Q ss_pred EEEEeccCCc
Q 016457 296 GYFPVNYGGA 305 (389)
Q Consensus 296 ~i~~~~~~~~ 305 (389)
++|++..+..
T Consensus 340 ~iw~~~~~~~ 349 (369)
T 3zwl_B 340 RLHHFEKSYF 349 (369)
T ss_dssp EEEEECHHHH
T ss_pred EEEECccccc
Confidence 9999987543
No 89
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-38 Score=283.46 Aligned_cols=282 Identities=14% Similarity=0.160 Sum_probs=231.6
Q ss_pred eEEEeecCCCCeE-EEEecCCeEEEEeCCCc-e---eeeeecCCCCcEEEEEEeC-CCCCCEEEEEecCCeEEEEEccCC
Q 016457 41 VFEIVPKNDWSLM-AVSLSTNVVKLYSPVTG-Q---YSGECKGHSSTVNQISFSG-PSTPHVLHSCSSDGTIRAWDTRSF 114 (389)
Q Consensus 41 v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~-~---~~~~~~~~~~~v~~i~~~~-~~~~~~l~s~~~dg~i~iwd~~~~ 114 (389)
...++++|+...+ ++++.+|.|+||++... + .+..+.+|...|.+++|+| ++ .+|++|+.||+|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND--NVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT--TEEEEEETTSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC--CEEEEEeCCCeEEEEEccCC
Confidence 4467888877444 45788999999998654 2 3456788999999999999 77 79999999999999999987
Q ss_pred -------eEEEEEEcCCCCeEEEEEeCCC-CeEEEeecCCeEEEEECcCCceeeee--eecccCCeeEEEEecCCCCeEE
Q 016457 115 -------HEVWSVTAGSQEIFCFSFGGST-DYLLAAGCGSQIQFWDWRNKKQVACL--EESHVEDVTQVHFVPNNQNKVV 184 (389)
Q Consensus 115 -------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~ 184 (389)
+.+..+.+|...|.+++|+|++ ..+++++.|+.|++||+++++.+..+ . .|...|.+++|+|++. +|+
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~ 192 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD-VHPDTIYSVDWSRDGA-LIC 192 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT-TCCSCEEEEEECTTSS-CEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC-CCCCceEEEEECCCCC-EEE
Confidence 6688899999999999999997 57888888999999999999999888 5 7999999999999995 999
Q ss_pred EEeCCCcEEEEecCCCCCCCccceee-eccCCc-eeeEEEecCCCcEEEEE---ecCCcEEEEEcCCCce-eEEeecccc
Q 016457 185 SASVDGLICTFDTGGDINDDDLLESV-INVGTS-VGKVGFFGETNKHLWCL---THIETLSIWDWKDGQN-VASFENARS 258 (389)
Q Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~-~~~~~~~~~ 258 (389)
+++.|+.|++||++++ ..+..+ ..|... +..++|+ +++.+|+++ +.|+.|++||+++++. +.....
T Consensus 193 ~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--- 264 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKG----TVVAEKDRPHEGTRPVHAVFV-SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--- 264 (402)
T ss_dssp EEETTSEEEEEETTTT----EEEEEEECSSCSSSCCEEEEC-STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC---
T ss_pred EEecCCcEEEEeCCCC----ceeeeeccCCCCCcceEEEEc-CCCcEEEEeccCCCCceEEEEcCccccCCceEEec---
Confidence 9999999999999954 344555 456655 8999999 778889888 7899999999998764 333321
Q ss_pred cccCCccCCCCCceeeecccCCCCeEEE-EEecCCceEEEEEeccCCccccCCCeEEEecc--cceeeeeccCCCcccCC
Q 016457 259 LASDSWTLDDVDYFVDCHYPGEGENLWV-IGGTGAGTVGYFPVNYGGAATIGPPEAVLVGG--HTAVVRSVLPMPSVQGR 335 (389)
Q Consensus 259 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l-~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~ 335 (389)
.|...+..++|+|+++ +| ++|+.||.|++|++.+++. .+..+. . |...|.++
T Consensus 265 --------~~~~~v~~~~~s~~~~--~l~~~g~~dg~i~i~d~~~~~~-----~~~~l~-~~~~~~~v~~~--------- 319 (402)
T 2aq5_A 265 --------DTSSGVLLPFFDPDTN--IVYLCGKGDSSIRYFEITSEAP-----FLHYLS-MFSSKESQRGM--------- 319 (402)
T ss_dssp --------CCCSSCEEEEEETTTT--EEEEEETTCSCEEEEEECSSTT-----CEEEEE-EECCSSCCSEE---------
T ss_pred --------cCCCceeEEEEcCCCC--EEEEEEcCCCeEEEEEecCCCc-----ceEeec-ccccCCcccce---------
Confidence 1557899999999998 55 4677899999999998762 123333 3 45889999
Q ss_pred CCCCCceeEEEecCCCeEEEEeccCC
Q 016457 336 PAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 336 ~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|+|++.++++ .|+.+++|++...
T Consensus 320 ~~sp~~~~~~s--~~~~~~~~~l~~~ 343 (402)
T 2aq5_A 320 GYMPKRGLEVN--KCEIARFYKLHER 343 (402)
T ss_dssp EECCGGGSCGG--GTEEEEEEEEETT
T ss_pred EEeccccccee--cceeEEEEEcCCC
Confidence 99999998875 4679999999875
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=274.12 Aligned_cols=270 Identities=14% Similarity=0.112 Sum_probs=219.7
Q ss_pred cccCC---CCeEEEEecCc--eeee--eecCcceEEEeecCC---CCeEEEEecCCeEEEEeCCCce-eeeeecCCCCcE
Q 016457 15 QSCDN---VNSIKRFGLKN--SIQT--NFGDDYVFEIVPKND---WSLMAVSLSTNVVKLYSPVTGQ-YSGECKGHSSTV 83 (389)
Q Consensus 15 ~s~~~---~~~i~~w~~~~--~~~~--~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~~~-~~~~~~~~~~~v 83 (389)
++++. |+.|++|++.. .... ..+...|.+++|+|+ +.+|++|+.||.|++||+.+++ .+..+.+|...|
T Consensus 35 ~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 114 (357)
T 3i2n_A 35 TMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEII 114 (357)
T ss_dssp EEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCE
T ss_pred EecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccce
Confidence 44554 89999999864 2222 223889999999998 6999999999999999999887 888999999999
Q ss_pred EEEEE------eCCCCCCEEEEEecCCeEEEEEccCCe-EEEEEEcCCC----CeEEEE----EeCCCCeEEEeecCCeE
Q 016457 84 NQISF------SGPSTPHVLHSCSSDGTIRAWDTRSFH-EVWSVTAGSQ----EIFCFS----FGGSTDYLLAAGCGSQI 148 (389)
Q Consensus 84 ~~i~~------~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~d~~i 148 (389)
.+++| +|++ .+|++++.||.|++||+.+++ .+..+..+.. .+.+++ |+|++..+++++.|+.|
T Consensus 115 ~~~~~~~~~~~s~~~--~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i 192 (357)
T 3i2n_A 115 NAIDGIGGLGIGEGA--PEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDI 192 (357)
T ss_dssp EEEEEESGGGCC-CC--CEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEE
T ss_pred EEEeeccccccCCCc--cEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeE
Confidence 99965 5667 799999999999999999886 6777776544 899998 67889999999999999
Q ss_pred EEEECcCCceeeeeeecccCCeeEEEEec---CCCCeEEEEeCCCcEEEEecCCCCCCCcc-ceeeeccCCceeeEEEec
Q 016457 149 QFWDWRNKKQVACLEESHVEDVTQVHFVP---NNQNKVVSASVDGLICTFDTGGDINDDDL-LESVINVGTSVGKVGFFG 224 (389)
Q Consensus 149 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~i~~~~~~~ 224 (389)
++||+++++..... .|...|.+++|+| ++. .|++++.||.|++||++++...... ......|...|.+++|+
T Consensus 193 ~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 268 (357)
T 3i2n_A 193 KLFDLRNMALRWET--NIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHL- 268 (357)
T ss_dssp EEEETTTTEEEEEE--ECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEE-
T ss_pred EEEECccCceeeec--CCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEEC-
Confidence 99999998876554 5889999999999 775 9999999999999999854311111 11233789999999999
Q ss_pred CCCc-EEEEEecCCcEEEEEcCCCc-------------------eeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 225 ETNK-HLWCLTHIETLSIWDWKDGQ-------------------NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 225 ~~~~-~l~~~~~d~~i~i~d~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
+++. +|++++.||.|++||++++. .+..+.. |...|.+++|+|+++
T Consensus 269 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~-- 334 (357)
T 3i2n_A 269 PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL------------STQPISSLDWSPDKR-- 334 (357)
T ss_dssp TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC------------CSSCEEEEEECSSST--
T ss_pred CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecccc------------CCCCeeEEEEcCCCC--
Confidence 5666 89999999999999998653 3334443 778999999999998
Q ss_pred EEE-EecCCceEEEEEeccCC
Q 016457 285 WVI-GGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 285 ~l~-~g~~dg~i~i~~~~~~~ 304 (389)
+|+ +++.||.|++|++.+.+
T Consensus 335 ~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 335 GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp TEEEEEETTSEEEEEEECC--
T ss_pred eEEEEecCCCcEEEEECCCcc
Confidence 666 89999999999998654
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=276.83 Aligned_cols=314 Identities=15% Similarity=0.116 Sum_probs=223.2
Q ss_pred CCCccccCCCCeEEEEecCc--eeeeee--------------cCcceEEEeecC-CCCeEEEEecCCeEEEEeCCCceee
Q 016457 11 QPKSQSCDNVNSIKRFGLKN--SIQTNF--------------GDDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQYS 73 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~~--~~~~~~--------------~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~ 73 (389)
....++++.|+.|++|++.. ....+. +...|.+++|+| ++.+|++++.||.|++||+.+++..
T Consensus 56 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 135 (408)
T 4a11_B 56 GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA 135 (408)
T ss_dssp CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc
Confidence 34578899999999999863 222222 378899999999 7789999999999999999999888
Q ss_pred eeecCCCCcEEEEEEeCCCC-CCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEE
Q 016457 74 GECKGHSSTVNQISFSGPST-PHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFW 151 (389)
Q Consensus 74 ~~~~~~~~~v~~i~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw 151 (389)
..+. +...+.++.|++.+. ..++++++.|+.|++||+++++.+..+..|...|.+++|+|++.. +++++.||.|++|
T Consensus 136 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~ 214 (408)
T 4a11_B 136 DVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLW 214 (408)
T ss_dssp EEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred eecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEE
Confidence 8877 778899999998651 149999999999999999999999999999999999999999886 7778889999999
Q ss_pred ECcCCc-eeeeee--------------ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCc
Q 016457 152 DWRNKK-QVACLE--------------ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTS 216 (389)
Q Consensus 152 d~~~~~-~~~~~~--------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 216 (389)
|++++. .+..+. ..|...|.+++|+|++. +|++++.||.|++||++++................
T Consensus 215 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 293 (408)
T 4a11_B 215 DVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKK 293 (408)
T ss_dssp ETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSS
T ss_pred ECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceeccccccccccc
Confidence 998765 333331 26889999999999995 99999999999999999654221111111111111
Q ss_pred eeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEE
Q 016457 217 VGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVG 296 (389)
Q Consensus 217 i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~ 296 (389)
.....+.......+++++.++.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.||.|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------------~~~~v~~~~~s~~~~--~l~s~~~dg~i~ 359 (408)
T 4a11_B 294 GLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG------------HYKTVDCCVFQSNFQ--ELYSGSRDCNIL 359 (408)
T ss_dssp CCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC------------CSSCEEEEEEETTTT--EEEEEETTSCEE
T ss_pred cceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc------------CCCeEEEEEEcCCCC--EEEEECCCCeEE
Confidence 222233324456778888999999999999999999886 669999999999999 899999999999
Q ss_pred EEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCC-CceeEEEecCCCeEEEEecc
Q 016457 297 YFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQS-HGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 297 i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~-~~~~l~s~~~dg~v~iW~~~ 359 (389)
+|++.+++. +.... .+. ....+ ++ ....+.+++.|+.+++|+..
T Consensus 360 iw~~~~~~~------~~~~~-~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 360 AWVPSLYEP------VPDDD-ETT-TKSQL-----------NPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EEEECC----------------------------------------------------------
T ss_pred EEeCCCCCc------cCCCC-ceE-ecccc-----------ccccceeecccCccCceeecCCc
Confidence 999998765 22221 111 11111 11 22234677789999999865
No 92
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2e-37 Score=273.84 Aligned_cols=264 Identities=14% Similarity=0.154 Sum_probs=215.1
Q ss_pred CCccccCCCCeEEEEecC--ceeeeee--c-CcceEEEeecC-CCCeEEEEecCCeEEEEeCCCceeeeeecC---CCCc
Q 016457 12 PKSQSCDNVNSIKRFGLK--NSIQTNF--G-DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQYSGECKG---HSST 82 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~--~~~~~~~--~-~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~ 82 (389)
...++++.|+.|++|++. .....+. + ...|.+++|+| ++.+|++++.|+.|++||+.+ +.+..+.. |...
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYW 165 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCC
T ss_pred CEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCC
Confidence 467889999999999986 3444443 3 88999999999 779999999999999999985 44445543 4588
Q ss_pred EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECcC----Cc
Q 016457 83 VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWRN----KK 157 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~----~~ 157 (389)
|.+++|+|++ .+|++|+.|+.|++||+ +++.+..+..|...|.+++|+|++. .+++++.|+.|++||+++ +.
T Consensus 166 v~~~~~~~~~--~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 242 (383)
T 3ei3_B 166 YCCVDVSVSR--QMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNS 242 (383)
T ss_dssp EEEEEEETTT--TEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTC
T ss_pred eEEEEECCCC--CEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccc
Confidence 9999999999 79999999999999999 5788899999999999999999998 788888899999999998 55
Q ss_pred eeeeeeecccCCeeEEEEec-CCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc-------CC----------ceee
Q 016457 158 QVACLEESHVEDVTQVHFVP-NNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV-------GT----------SVGK 219 (389)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------~~----------~i~~ 219 (389)
.+..+ +|...|.+++|+| ++. +|++++.|+.|++||++++.. ...+..| .. .+..
T Consensus 243 ~~~~~--~~~~~v~~~~~s~~~~~-~l~~~~~d~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 315 (383)
T 3ei3_B 243 YIAEM--PHEKPVNAAYFNPTDST-KLLTTDQRNEIRVYSSYDWSK----PDQIIIHPHRQFQHLTPIKATWHPMYDLIV 315 (383)
T ss_dssp EEEEE--ECSSCEEEEEECTTTSC-EEEEEESSSEEEEEETTBTTS----CSEEEECCBCCCTTSCCCCCEECSSSSEEE
T ss_pred eEEEe--cCCCceEEEEEcCCCCC-EEEEEcCCCcEEEEECCCCcc----ccccccccccccccccceEEeccCCCCceE
Confidence 55555 4899999999999 885 999999999999999996532 2222222 22 2333
Q ss_pred EEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 220 VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 220 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
++++ +++++ +++.|+.|++||+.+++.+..+..+. |...+..++|+|+++ +|++|+ ||.|++||
T Consensus 316 ~~~s-~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~----------~~~~~~~~~~s~~g~--~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 316 AGRY-PDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN----------AAGIISLNKFSPTGD--VLASGM-GFNILIWN 379 (383)
T ss_dssp EECB-CCTTT--CTTCCCCEEEEETTTCCEEEEECBTT----------BCSCCCEEEECTTSS--EEEEEE-TTEEEEEE
T ss_pred EEec-CCccc--ccCCCCeEEEEecCCCceeeeecCCC----------CCceEEEEEEecCcc--EEEEec-CCcEEEEe
Confidence 4555 34444 66789999999999999999988643 456677779999999 889996 99999999
Q ss_pred ecc
Q 016457 300 VNY 302 (389)
Q Consensus 300 ~~~ 302 (389)
+++
T Consensus 380 ~~~ 382 (383)
T 3ei3_B 380 RED 382 (383)
T ss_dssp CC-
T ss_pred cCC
Confidence 874
No 93
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-37 Score=276.02 Aligned_cols=273 Identities=12% Similarity=0.140 Sum_probs=228.4
Q ss_pred ccccCCCCeEEEEecCc------eeeeeec-CcceEEEeecC-CCCeEEEEecCCeEEEEeCCCc-------eeeeeecC
Q 016457 14 SQSCDNVNSIKRFGLKN------SIQTNFG-DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTG-------QYSGECKG 78 (389)
Q Consensus 14 ~~s~~~~~~i~~w~~~~------~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~ 78 (389)
.++++.+|.|++|++.+ .+..+.+ .+.|++++|+| ++.+|++|+.||.|++||+.++ +.+..+.+
T Consensus 50 ~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~ 129 (402)
T 2aq5_A 50 ICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG 129 (402)
T ss_dssp EBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC
T ss_pred EEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC
Confidence 34578899999999853 3344555 88999999999 8999999999999999999987 56788899
Q ss_pred CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEE--EcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCC
Q 016457 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV--TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK 156 (389)
Q Consensus 79 ~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 156 (389)
|...|.+++|+|++. .+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++..+++++.|+.|++||++++
T Consensus 130 h~~~v~~~~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 208 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQ-NVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKG 208 (402)
T ss_dssp CSSCEEEEEECSSBT-TEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTT
T ss_pred CCCeEEEEEECcCCC-CEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCC
Confidence 999999999999973 59999999999999999999999999 789999999999999999999999999999999999
Q ss_pred ceeeeeeecccCC-eeEEEEecCCCCeEEEE---eCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEE-
Q 016457 157 KQVACLEESHVED-VTQVHFVPNNQNKVVSA---SVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLW- 231 (389)
Q Consensus 157 ~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~- 231 (389)
+.+..+...|... +.++.|+|++. +|++| +.|+.|++||+++... ........+...+..++|+ +++.+|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s-~~~~~l~~ 284 (402)
T 2aq5_A 209 TVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEE--PLSLQELDTSSGVLLPFFD-PDTNIVYL 284 (402)
T ss_dssp EEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSS--CSEEEECCCCSSCEEEEEE-TTTTEEEE
T ss_pred ceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccC--CceEEeccCCCceeEEEEc-CCCCEEEE
Confidence 9988883267765 89999999985 88888 7899999999995431 1112223567789999999 6667775
Q ss_pred EEecCCcEEEEEcCCCce-eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 232 CLTHIETLSIWDWKDGQN-VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 232 ~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+++.|+.|++||+.+++. +..+.... |...+.+++|+|++. ++++ .++.+++|++.++..
T Consensus 285 ~g~~dg~i~i~d~~~~~~~~~~l~~~~----------~~~~v~~~~~sp~~~--~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSEAPFLHYLSMFS----------SKESQRGMGYMPKRG--LEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EETTCSCEEEEEECSSTTCEEEEEEEC----------CSSCCSEEEECCGGG--SCGG--GTEEEEEEEEETTEE
T ss_pred EEcCCCeEEEEEecCCCcceEeecccc----------cCCcccceEEecccc--ccee--cceeEEEEEcCCCcE
Confidence 555799999999998874 55555433 568899999999987 5554 567999999998654
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-37 Score=273.16 Aligned_cols=281 Identities=9% Similarity=0.055 Sum_probs=228.6
Q ss_pred CCccccCCCCeEEEEecCc----eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeee--ecCCCCcEE
Q 016457 12 PKSQSCDNVNSIKRFGLKN----SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGE--CKGHSSTVN 84 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~ 84 (389)
...++++.++.|++|++.. .+..+.+ ...|.+++|+|++++|++++.|+.|++||+.+++.... +..|...|.
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 100 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR 100 (372)
T ss_dssp SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE
T ss_pred CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee
Confidence 4577888999999999864 5666766 88999999999999999999999999999988865443 467999999
Q ss_pred EEEEeCCCCCCEEEEEecCCeEEEEEccCCeE---EEEE-EcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECc------
Q 016457 85 QISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE---VWSV-TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR------ 154 (389)
Q Consensus 85 ~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~------ 154 (389)
+++|+|++ .+|++++.|+.|++||++.+.. ...+ ..|...|.+++|+|++..+++++.|+.|++||++
T Consensus 101 ~~~~~~~~--~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 178 (372)
T 1k8k_C 101 CVRWAPNE--KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEE 178 (372)
T ss_dssp EEEECTTS--SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSC
T ss_pred EEEECCCC--CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccc
Confidence 99999998 7999999999999999988762 3333 4578999999999999999999999999999954
Q ss_pred ------------CCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEE
Q 016457 155 ------------NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGF 222 (389)
Q Consensus 155 ------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (389)
.++.+..+. .|...|.+++|+|++. +|++++.|+.|++||++++ ..+..+..|...|.+++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~ 252 (372)
T 1k8k_C 179 RPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKK----MAVATLASETLPLLAVTF 252 (372)
T ss_dssp CCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGT----TEEEEEECSSCCEEEEEE
T ss_pred cccccccccccchhhheEecC-CCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCC----ceeEEEccCCCCeEEEEE
Confidence 567788887 7999999999999995 9999999999999999854 456777788889999999
Q ss_pred ecCCCcEEEEEecCCcEEEEEcCC--Cc--eeEEeeccc-------------------cccc------CCccCCCCCcee
Q 016457 223 FGETNKHLWCLTHIETLSIWDWKD--GQ--NVASFENAR-------------------SLAS------DSWTLDDVDYFV 273 (389)
Q Consensus 223 ~~~~~~~l~~~~~d~~i~i~d~~~--~~--~~~~~~~~~-------------------~~~~------~~~~~~~~~~i~ 273 (389)
+ +++.+++++ .|+.|++|++.+ ++ .+..+.... .... .....+|...|.
T Consensus 253 ~-~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 330 (372)
T 1k8k_C 253 I-TESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVS 330 (372)
T ss_dssp E-ETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEE
T ss_pred e-cCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcc
Confidence 9 677777766 999999999987 42 111111000 0000 111125889999
Q ss_pred eeccc-CCC---CeEEEEEecCCceEEEEEeccCC
Q 016457 274 DCHYP-GEG---ENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 274 ~~~~~-~~~---~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
+++|. ++| . +|++|+.||.|++|++.+++
T Consensus 331 ~~~~~~~~g~~~~--~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 331 QISVLSGGKAKCS--QFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp EEEEEESTTTSCS--EEEEEETTSEEEEEEHHHHH
T ss_pred eeEEecCCCccee--eEEEecCCCceEEEEecChh
Confidence 99966 665 7 89999999999999998754
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-38 Score=286.41 Aligned_cols=271 Identities=11% Similarity=0.026 Sum_probs=211.6
Q ss_pred cCcceEEEeecCCC---------CeEEEE-------------------ecCCeEEEEeCCCceee----eeecCCCCcEE
Q 016457 37 GDDYVFEIVPKNDW---------SLMAVS-------------------LSTNVVKLYSPVTGQYS----GECKGHSSTVN 84 (389)
Q Consensus 37 ~~~~v~~~~~~~~~---------~~l~~~-------------------~~d~~i~iw~~~~~~~~----~~~~~~~~~v~ 84 (389)
..+.|.+|+|+|++ ++||+| +.|++|+||++.+++.. ..+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 36788899999876 567664 46789999999877642 34567889999
Q ss_pred EEEEeCCC----CCCEEEEEecCCeEEEEEccCCeE-----------EEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEE
Q 016457 85 QISFSGPS----TPHVLHSCSSDGTIRAWDTRSFHE-----------VWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQ 149 (389)
Q Consensus 85 ~i~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 149 (389)
+++|+|++ .+.+|++++.||+|++||+.++.. ...+.+|...|++++|+++ ..|++++.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 99999971 126999999999999999976531 2467888999999999964 5889999999999
Q ss_pred EEECcCCc-eeeeeeecccCCeeEE--EEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCC--ceeeEEEec
Q 016457 150 FWDWRNKK-QVACLEESHVEDVTQV--HFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGT--SVGKVGFFG 224 (389)
Q Consensus 150 iwd~~~~~-~~~~~~~~~~~~v~~~--~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~--~i~~~~~~~ 224 (389)
+||++++. +...+. +|...|++| +|+|+++++|++++.|++|++||++++ .....+..|.. .|.+++|+
T Consensus 291 lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~----~~~~~~~~~~~~~~v~~v~fs- 364 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI----ATTKTTVSRFRGSNLVPVVYC- 364 (524)
T ss_dssp EEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH----HHHCEEEEECSCCSCCCEEEE-
T ss_pred EEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC----CcccccccccccCcccceEeC-
Confidence 99999774 445566 899999999 567776349999999999999999843 33344444543 57899999
Q ss_pred CCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 225 ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 225 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
|+++.+++++.|++|++||++++.++..+.+ |...|.+++|+|+++ +|++|+.||+|++|++..+.
T Consensus 365 p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g------------H~~~V~sva~Sp~g~--~l~Sgs~Dgtv~lwd~~~~~ 430 (524)
T 2j04_B 365 PQIYSYIYSDGASSLRAVPSRAAFAVHPLVS------------RETTITAIGVSRLHP--MVLAGSADGSLIITNAARRL 430 (524)
T ss_dssp TTTTEEEEECSSSEEEEEETTCTTCCEEEEE------------CSSCEEEEECCSSCC--BCEEEETTTEEECCBSCSST
T ss_pred CCcCeEEEeCCCCcEEEEECcccccceeeec------------CCCceEEEEeCCCCC--eEEEEECCCEEEEEechHhh
Confidence 6778899999999999999999988888876 779999999999999 88999999999999987542
Q ss_pred ccccCCCeEEEec----ccceeeeeccCCCcccCCCCCCCceeE
Q 016457 305 AATIGPPEAVLVG----GHTAVVRSVLPMPSVQGRPAQSHGIFG 344 (389)
Q Consensus 305 ~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~s~~~~~l 344 (389)
. ..... .+...|.++ +|+|++..+
T Consensus 431 ~-------~~~~~~~~~~~~~~v~~v---------~~sp~g~~~ 458 (524)
T 2j04_B 431 L-------HGIKNSSATQKSLRLWKW---------DYSIKDDKY 458 (524)
T ss_dssp T-------TCC------CCCCEEEEC---------BCCSSSCEE
T ss_pred c-------cccccCccceeeeEEEEe---------ccCCCCCeE
Confidence 2 11110 112256777 999999854
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=296.14 Aligned_cols=259 Identities=16% Similarity=0.213 Sum_probs=216.1
Q ss_pred eeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCC--CceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 34 TNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV--TGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 34 ~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
.+.+ .+.|++++|+|++++|++|+.||.|+|||+. +++.+..+.+|...|.+++|+|+..+++|++|+.||.|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 4555 8899999999999999999999999999998 567788899999999999999882127999999999999999
Q ss_pred ccCCe--EEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEEEEECcCCc--eeeeeeecccCCeeEEEEecC------
Q 016457 111 TRSFH--EVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQFWDWRNKK--QVACLEESHVEDVTQVHFVPN------ 178 (389)
Q Consensus 111 ~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~------ 178 (389)
+.+++ .+..+..|...|++++|+|+ +..+++++.||.|++||++++. ....+. +|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEECCCC-----
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEecCccccccc
Confidence 99987 77788889999999999998 8899999999999999999873 334454 79999999999994
Q ss_pred -------CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC--CcEEEEEecCCcEEEEEcCCCce
Q 016457 179 -------NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET--NKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 179 -------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
+ ..+++|+.||.|++||++++.........+..|...|.+++|+|.. +.++++++.||.|++||+.++..
T Consensus 163 ~~~~~~d~-~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 163 EHNGTKES-RKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----CGGG-CCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred ccccCCCC-CEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 6 4999999999999999996644345556677899999999999433 89999999999999999987642
Q ss_pred eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 250 VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
....... ....|...+.+++|+|+++ ++++|+.||.|++|++..+
T Consensus 242 ~~~~~~~-------~~~~~~~~v~~l~~spdg~--~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 242 PWKKTLL-------KEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCBCCBS-------SSSCCSSCCCCEEECTTTC--CEEEECSSSCEECCBCCSS
T ss_pred cceeEEe-------ccCCCCCceEEEEEcCCCC--EEEEEcCCCEEEEEecCCC
Confidence 2111100 0012678999999999999 8899999999999999854
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.6e-37 Score=275.31 Aligned_cols=298 Identities=15% Similarity=0.173 Sum_probs=237.1
Q ss_pred CcceEEEeecCCC----------CeEEEEec----CCeEEEEeCC--------------------------Ccee-eeee
Q 016457 38 DDYVFEIVPKNDW----------SLMAVSLS----TNVVKLYSPV--------------------------TGQY-SGEC 76 (389)
Q Consensus 38 ~~~v~~~~~~~~~----------~~l~~~~~----d~~i~iw~~~--------------------------~~~~-~~~~ 76 (389)
.-+..++.|.|+. .++++|+. ...|.++++. +++. ....
T Consensus 45 ~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 124 (430)
T 2xyi_A 45 EWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIK 124 (430)
T ss_dssp SSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEE
T ss_pred CCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEE
Confidence 4566788888865 35777765 3467777542 1111 2334
Q ss_pred cCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC----------CeEEEEEEcCCCCeEEEEEeCCCC-eEEEeecC
Q 016457 77 KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS----------FHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCG 145 (389)
Q Consensus 77 ~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 145 (389)
..|.+.|++++|+|++. .+|++++.||.|++|++.+ ...+..+..|...|.+++|+|.+. .|++++.|
T Consensus 125 ~~h~~~v~~l~~~p~~~-~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d 203 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNA-CVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD 203 (430)
T ss_dssp EEESSCCSEEEEETTEE-EEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT
T ss_pred EcCCCcEEEEEECCCCC-cEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC
Confidence 56999999999999732 6999999999999999987 677888999999999999999888 88888889
Q ss_pred CeEEEEECcCCce-------eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCcee
Q 016457 146 SQIQFWDWRNKKQ-------VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVG 218 (389)
Q Consensus 146 ~~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~ 218 (389)
|.|++||++++.. ...+. +|...|.+++|+|++.++|++++.|+.|++||+++.. ....+..+..|...|.
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~-~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNN-TSKPSHTVDAHTAEVN 281 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSC-SSSCSEEEECCSSCEE
T ss_pred CeEEEEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCC-CCcceeEeecCCCCeE
Confidence 9999999987422 34454 7999999999999655699999999999999999642 2245566678999999
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCC-CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEE
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKD-GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGY 297 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i 297 (389)
+++|+|....++++++.||.|++||+++ ...+..+.. |...|.+++|+|+++. +|++++.||.|++
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~------------h~~~v~~i~~sp~~~~-~l~s~~~d~~i~i 348 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES------------HKDEIFQVQWSPHNET-ILASSGTDRRLHV 348 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC------------CSSCEEEEEECSSCTT-EEEEEETTSCCEE
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec------------CCCCEEEEEECCCCCC-EEEEEeCCCcEEE
Confidence 9999954445899999999999999998 456777776 6689999999999864 5789999999999
Q ss_pred EEeccCCcccc--------CCCeEEEecccceeeeeccCCCcccCCCCCCCce-eEEEecCCCeEEEEeccCC
Q 016457 298 FPVNYGGAATI--------GPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI-FGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 298 ~~~~~~~~~~~--------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~-~l~s~~~dg~v~iW~~~~~ 361 (389)
||+........ ..++..+ .+|...|+++ +|+|++. +|++++.||.|++|++...
T Consensus 349 wd~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~---------~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 349 WDLSKIGEEQSTEDAEDGPPELLFIH-GGHTAKISDF---------SWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEGGGTTCCCCHHHHHHCCTTEEEEC-CCCSSCEEEE---------EECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EeCCCCccccCccccccCCcceEEEc-CCCCCCceEE---------EECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99987321000 1123344 4889999999 9999999 8999999999999999865
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-38 Score=277.80 Aligned_cols=282 Identities=9% Similarity=-0.019 Sum_probs=213.9
Q ss_pred CCccccCCCCeEEEEecCc----eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce---eeeeecCCCCcE
Q 016457 12 PKSQSCDNVNSIKRFGLKN----SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ---YSGECKGHSSTV 83 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v 83 (389)
...++++.|+.|++|++.. .+..+.+ ...|.+++|+|++++|++++.|+.|++||+.+++ ....+.+|...|
T Consensus 24 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v 103 (377)
T 3dwl_C 24 TEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAA 103 (377)
T ss_dssp SEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCE
T ss_pred CEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCce
Confidence 3578888999999999863 4555666 8899999999999999999999999999999877 666778899999
Q ss_pred EEEEEeCCCCCCEEEEEecCCeEEEEEccCCe---EEEEEEc-CCCCeEEEEEeCCCCeEEEeecCCeEEEEECc-----
Q 016457 84 NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH---EVWSVTA-GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR----- 154 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~----- 154 (389)
.+++|+|++ ++|++++.|+.|++||+++++ ....+.. |...|.+++|+|++..+++++.|+.|++||++
T Consensus 104 ~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 181 (377)
T 3dwl_C 104 TFVRWSPNE--DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVD 181 (377)
T ss_dssp EEEECCTTS--SCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC
T ss_pred EEEEECCCC--CEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccC
Confidence 999999998 799999999999999999877 3677887 89999999999999999999999999999985
Q ss_pred -------------CCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEE
Q 016457 155 -------------NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVG 221 (389)
Q Consensus 155 -------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (389)
.++.+..+ .|...|++++|+|+++ +|++++.|+.|++||++++......+..+..|...|.+++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 258 (377)
T 3dwl_C 182 AKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLL 258 (377)
T ss_dssp -CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEE
T ss_pred CCccccccccccchhhhhhcc--cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEE
Confidence 24445555 6899999999999996 9999999999999999966432223667788999999999
Q ss_pred EecCCCcEEEEEecCCcEEEEEcCCCc--eeEEeeccccc--------------------------------------cc
Q 016457 222 FFGETNKHLWCLTHIETLSIWDWKDGQ--NVASFENARSL--------------------------------------AS 261 (389)
Q Consensus 222 ~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~--------------------------------------~~ 261 (389)
|+ +++.+|++++.++.+ +|+..... ....+...... ..
T Consensus 259 ~s-~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 336 (377)
T 3dwl_C 259 WA-NESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSI 336 (377)
T ss_dssp EE-ETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------
T ss_pred Ec-CCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 99 678888888766655 77665221 11111100000 00
Q ss_pred CCccCCCCCceeeecccCCCCe--EEEEEecCCceEEEEEe
Q 016457 262 DSWTLDDVDYFVDCHYPGEGEN--LWVIGGTGAGTVGYFPV 300 (389)
Q Consensus 262 ~~~~~~~~~~i~~~~~~~~~~~--~~l~~g~~dg~i~i~~~ 300 (389)
......|...|.++.+.+.... ..|++|+.||.|++||+
T Consensus 337 ~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 337 SSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1112238899999997664431 24799999999999985
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-36 Score=257.40 Aligned_cols=263 Identities=17% Similarity=0.217 Sum_probs=228.0
Q ss_pred CCccccCCCCeEEEEecCc--eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCc---eeeeeecCCCCcEEE
Q 016457 12 PKSQSCDNVNSIKRFGLKN--SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTG---QYSGECKGHSSTVNQ 85 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~ 85 (389)
...++++.|+.|++|++.. ....+.. ...|.+++|+|++++|++|+.|+.|++|++... +.+..+.+|...|.+
T Consensus 30 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~ 109 (313)
T 3odt_A 30 SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCS 109 (313)
T ss_dssp TEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEE
T ss_pred CEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEE
Confidence 3578899999999999864 3444555 889999999999999999999999999998654 567788899999999
Q ss_pred EEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECcCCceeeeeee
Q 016457 86 ISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWRNKKQVACLEE 164 (389)
Q Consensus 86 i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 164 (389)
++|. + .++++++.||.|++|| .++.+..+..|...+.+++|.| ++..+++++.|+.|++|| ..+....+..
T Consensus 110 ~~~~--~--~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~ 181 (313)
T 3odt_A 110 LSFQ--D--GVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSG 181 (313)
T ss_dssp EEEE--T--TEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECS
T ss_pred EEec--C--CEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEec
Confidence 9993 4 5999999999999999 6788889999999999999988 788899999999999999 4556666663
Q ss_pred cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEc
Q 016457 165 SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDW 244 (389)
Q Consensus 165 ~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~ 244 (389)
.|...+.+++|+|++ .+++++.||.|++||++++ ..+..+..|...|.+++|+ +++ .|++++.|+.|++||+
T Consensus 182 ~~~~~i~~~~~~~~~--~~~~~~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~~~-~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 182 IHNDVVRHLAVVDDG--HFISCSNDGLIKLVDMHTG----DVLRTYEGHESFVYCIKLL-PNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp SCSSCEEEEEEEETT--EEEEEETTSEEEEEETTTC----CEEEEEECCSSCEEEEEEC-TTS-CEEEEETTSEEEEECT
T ss_pred cCcccEEEEEEcCCC--eEEEccCCCeEEEEECCch----hhhhhhhcCCceEEEEEEe-cCC-CEEEEecCCEEEEEEC
Confidence 489999999999998 3999999999999999954 5667777899999999999 555 5899999999999999
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
.+++.+..+.. |...+.+++|+|+++ + ++++.||.|++|++.+++.
T Consensus 254 ~~~~~~~~~~~------------~~~~i~~~~~~~~~~--~-~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 254 ENGSLKQVITL------------PAISIWSVDCMSNGD--I-IVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp TTCCEEEEEEC------------SSSCEEEEEECTTSC--E-EEEETTSCEEEEESCGGGC
T ss_pred CCCceeEEEec------------cCceEEEEEEccCCC--E-EEEeCCCcEEEEeCCCCce
Confidence 99999988876 668999999999987 4 4688999999999998765
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-36 Score=272.33 Aligned_cols=296 Identities=13% Similarity=0.063 Sum_probs=233.7
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCce---eeeeecC-------------------------------------
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ---YSGECKG------------------------------------- 78 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~------------------------------------- 78 (389)
.++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468899999999966665 58899999999888 5555543
Q ss_pred -----------------CCCcEEEEEEeCCCCCCEE-EEEecCCeEEEEEcc--CCeEEEEEE--cCCCCeEEEEEeCCC
Q 016457 79 -----------------HSSTVNQISFSGPSTPHVL-HSCSSDGTIRAWDTR--SFHEVWSVT--AGSQEIFCFSFGGST 136 (389)
Q Consensus 79 -----------------~~~~v~~i~~~~~~~~~~l-~s~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~ 136 (389)
|.+.|.+++|+|++ .+| ++++.||.|++||+. +++.+..+. .+...|.+++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDE--SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECTTS--SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCC--CEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 33379999999999 675 899999999999999 888888876 557899999999999
Q ss_pred CeEEEeecCCeEEEEECcCCceee----eeeecccCCeeEEEEecC---CCCeEEEEeCCCcEEEEecCCCCCCCcccee
Q 016457 137 DYLLAAGCGSQIQFWDWRNKKQVA----CLEESHVEDVTQVHFVPN---NQNKVVSASVDGLICTFDTGGDINDDDLLES 209 (389)
Q Consensus 137 ~~l~~~~~d~~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 209 (389)
..|++++.+|.|++|++.+++... .+. +|...|++++|+|+ +. +|++++.|+.|++||++++ ..+..
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~----~~~~~ 235 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQC----FIVDK 235 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCT----TCEEE
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeee-cccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCC----ceeee
Confidence 999999999999999998876554 666 79999999999999 75 9999999999999999854 33444
Q ss_pred -eeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCc-------------cCCCCCceeee
Q 016457 210 -VINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSW-------------TLDDVDYFVDC 275 (389)
Q Consensus 210 -~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~~ 275 (389)
..+|...|.+++|+ ++.+|++++.|+.|++||+.+++++..+........... .......+.++
T Consensus 236 ~~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 313 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKI 313 (450)
T ss_dssp ECCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEE
T ss_pred eecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEE
Confidence 44788999999998 788999999999999999999998888764321110000 00134578999
Q ss_pred cccCCCCeEEEEEec-CCceEEEEEe--ccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecC---
Q 016457 276 HYPGEGENLWVIGGT-GAGTVGYFPV--NYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGE--- 349 (389)
Q Consensus 276 ~~~~~~~~~~l~~g~-~dg~i~i~~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~--- 349 (389)
+|+|+++ +|++++ .++.|++|++ ..+.. ..++..+. +| ..|.++ +|+|++.++++++.
T Consensus 314 ~~~~~~~--~l~~~~~~d~~i~iw~~~~~~~~~---l~~~~~~~-~~-~~v~~~---------~~~~~~~~v~~~~~~~~ 377 (450)
T 2vdu_B 314 IKSKNLP--FVAFFVEATKCIIILEMSEKQKGD---LALKQIIT-FP-YNVISL---------SAHNDEFQVTLDNKESS 377 (450)
T ss_dssp EECSSSS--EEEEEETTCSEEEEEEECSSSTTC---EEEEEEEE-CS-SCEEEE---------EEETTEEEEEECCTTCC
T ss_pred EEeCCCC--EEEEEECCCCeEEEEEeccCCCCc---eeeccEec-cC-CceEEE---------EecCCcEEEEEecccCC
Confidence 9999998 777777 8999999999 44311 01245554 66 788899 89997655555543
Q ss_pred ---CCeEEEEeccCC
Q 016457 350 ---DGRLCCWLSDDS 361 (389)
Q Consensus 350 ---dg~v~iW~~~~~ 361 (389)
+..|.+|.++..
T Consensus 378 ~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 378 GVQKNFAKFIEYNLN 392 (450)
T ss_dssp SSCCCSEEEEEEETT
T ss_pred CCCCcceEEEEEEcC
Confidence 556899988754
No 101
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=254.21 Aligned_cols=261 Identities=18% Similarity=0.223 Sum_probs=220.6
Q ss_pred CCCCeEEEEecC--ceeeeeec---CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCC
Q 016457 18 DNVNSIKRFGLK--NSIQTNFG---DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPS 92 (389)
Q Consensus 18 ~~~~~i~~w~~~--~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~ 92 (389)
+.|++|++||+. +.++.+.. ...|++++|+|++++|++|+.||+|++||+++++.+..+.+|...+.++.+. +
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~ 119 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--S 119 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--T
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--C
Confidence 358999999985 45565543 6789999999999999999999999999999999999999999998877765 4
Q ss_pred CCCEEEEEecCCeEEEEEccCC-eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCcee----eeeeeccc
Q 016457 93 TPHVLHSCSSDGTIRAWDTRSF-HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQV----ACLEESHV 167 (389)
Q Consensus 93 ~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~----~~~~~~~~ 167 (389)
..+++++.++.+++|+.... ..+..+.+|...+.++.+.+.+..+++++.|+.|++||+++++.. .... .+.
T Consensus 120 --~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~ 196 (318)
T 4ggc_A 120 --YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQ 196 (318)
T ss_dssp --TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC-CCC
T ss_pred --CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec-ccC
Confidence 58999999999999998865 566788899999999999999999999999999999999987542 2333 677
Q ss_pred CCeeEEEEecCCCCeEE--EEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe--cCCcEEEEE
Q 016457 168 EDVTQVHFVPNNQNKVV--SASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT--HIETLSIWD 243 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~d~~i~i~d 243 (389)
..|.+++++|.+.+.+. +++.++.|++||.+... ......+...+..+.|. +.+..+++++ .|+.|++||
T Consensus 197 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-----~~~~~~~~~~v~~~~~~-~~~~~~~~~sg~~d~~i~iwd 270 (318)
T 4ggc_A 197 GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-----CLSAVDAHSQVCSILWS-PHYKELISGHGFAQNQLVIWK 270 (318)
T ss_dssp SCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-----EEEEEECSSCEEEEEEE-TTTTEEEEEECTTTCCEEEEE
T ss_pred CceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-----ccccccceeeeeeeeec-ccccceEEEEEcCCCEEEEEE
Confidence 88999999998875553 45678999999998542 34445677789999999 4555555543 789999999
Q ss_pred cCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 244 WKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+.+++++..+.+ |...|.+++|+|+++ +|++|+.||+|+|||+...
T Consensus 271 ~~~~~~~~~l~g------------H~~~V~~l~~spdg~--~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 271 YPTMAKVAELKG------------HTSRVLSLTMSPDGA--TVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEECC------------CSSCEEEEEECTTSS--CEEEEETTTEEEEECCSCC
T ss_pred CCCCcEEEEEcC------------CCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCCC
Confidence 999999999987 779999999999999 8899999999999998753
No 102
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-37 Score=278.11 Aligned_cols=271 Identities=10% Similarity=0.126 Sum_probs=208.3
Q ss_pred CCccccCCCCeEEEEecCc----eeeeeec-CcceEEEeecC-CCCeEEEEecCCeEEEEeCCCceeeeeec--CCCCcE
Q 016457 12 PKSQSCDNVNSIKRFGLKN----SIQTNFG-DDYVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQYSGECK--GHSSTV 83 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~----~~~~~~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v 83 (389)
...|+++.||+|++||+.. ....+.+ .+.|++++|+| ++.+|++|+.||+|++||++++....... .+...+
T Consensus 133 ~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 212 (435)
T 4e54_B 133 STVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWF 212 (435)
T ss_dssp TCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCC
T ss_pred CEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccE
Confidence 3588999999999999852 2333445 88999999998 67899999999999999998765433333 344568
Q ss_pred EEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEEECcCCceeeee
Q 016457 84 NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFWDWRNKKQVACL 162 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~ 162 (389)
.+++|+|++ .+|++|+.||.|++||++ ++.+..+.+|...|++++|+|++.. +++++.|+.|++||+++.+....+
T Consensus 213 ~~~~~~~~~--~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~ 289 (435)
T 4e54_B 213 CSLDVSASS--RMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF 289 (435)
T ss_dssp CCEEEETTT--TEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC
T ss_pred EEEEECCCC--CEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE
Confidence 899999999 799999999999999986 4667788899999999999998875 456677999999999987654333
Q ss_pred e--ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccC------CceeeEEEecCCCcEEEEEe
Q 016457 163 E--ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVG------TSVGKVGFFGETNKHLWCLT 234 (389)
Q Consensus 163 ~--~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~l~~~~ 234 (389)
. .+|...|++++|+|++. +|++++.||.|++||++++. ....+..|. ..+....|+ +++..++++.
T Consensus 290 ~~~~~h~~~v~~~~~spdg~-~l~s~~~D~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 363 (435)
T 4e54_B 290 LYSLPHRHPVNAACFSPDGA-RLLTTDQKSEIRVYSASQWD----CPLGLIPHPHRHFQHLTPIKAAWH-PRYNLIVVGR 363 (435)
T ss_dssp SBCCBCSSCEEECCBCTTSS-EEEEEESSSCEEEEESSSSS----SEEEECCCCCCCCSSSCCCBCEEC-SSSSCEEEEC
T ss_pred EEeeeccccccceeECCCCC-eeEEEcCCCEEEEEECCCCc----cceEEecccccccccceeEEEEEc-CCCCEEEEEE
Confidence 1 26899999999999995 99999999999999998653 222222222 123345566 4444555443
Q ss_pred ------------cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeee-cccCCCCeEEEEEecCCceEEEEEec
Q 016457 235 ------------HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDC-HYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 235 ------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
.++.|++||..+++.+..+... |...|.++ +|+|+|. +|++|+ |+.|+||+++
T Consensus 364 ~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~-----------~~~~v~s~~~fspdg~--~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 364 YPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP-----------ESSGISSLNEFNPMGD--TLASAM-GYHILIWSQQ 429 (435)
T ss_dssp CCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS-----------SCCCCCCEEEECTTSS--CEEEEC-SSEEEECCCC
T ss_pred cCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC-----------CCCcEEEEEEECCCCC--EEEEEc-CCcEEEEECC
Confidence 3357999999999988887542 66778887 6999998 788875 8899999999
Q ss_pred cCCc
Q 016457 302 YGGA 305 (389)
Q Consensus 302 ~~~~ 305 (389)
+++.
T Consensus 430 ~gk~ 433 (435)
T 4e54_B 430 EART 433 (435)
T ss_dssp ----
T ss_pred cCee
Confidence 8764
No 103
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-37 Score=276.82 Aligned_cols=280 Identities=13% Similarity=0.125 Sum_probs=221.8
Q ss_pred eecCCCCeEEEEecCCeEEEEeCCCceeeeee-cCCCCcEEEEEEeC-CCCCCEEEEEecCCeEEEEEccC---Ce---E
Q 016457 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGEC-KGHSSTVNQISFSG-PSTPHVLHSCSSDGTIRAWDTRS---FH---E 116 (389)
Q Consensus 45 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~~~-~~~~~~l~s~~~dg~i~iwd~~~---~~---~ 116 (389)
.|+|++..+++++ .|+ .+++.+..+ .+|.+.|++++|+| ++ .+|++|+.||+|++||+.+ +. .
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~--~~l~s~s~dg~v~vwd~~~~~~~~~~~~ 104 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGET--PYLITGSDQGVIKIWNLKEIIVGEVYSS 104 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSS--CEEEEEETTSEEEEEEHHHHHTTCCCSC
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCC--CEEEEecCCceEEEeECcccccCcccce
Confidence 4788888887765 488 457888888 88999999999999 88 7999999999999999976 43 2
Q ss_pred EEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECc---CCceeeeee--------e-c--ccCCeeEEE--EecCCC
Q 016457 117 VWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR---NKKQVACLE--------E-S--HVEDVTQVH--FVPNNQ 180 (389)
Q Consensus 117 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~--------~-~--~~~~v~~~~--~~~~~~ 180 (389)
...+ .|...|.+++|+|++..+++++.||.|++||++ +++.+..+. . . +...+.++. +++++.
T Consensus 105 ~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 105 SLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp SEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 3333 488999999999999999999999999999995 454443332 0 1 445666766 457774
Q ss_pred CeEEEEeCCCcEEEEecCCCCCCCccceeeec--cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccc
Q 016457 181 NKVVSASVDGLICTFDTGGDINDDDLLESVIN--VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARS 258 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 258 (389)
+|++++.|+.|++||++++ ..+..+.. |...|.+++|+ +++.+|++++.||.|++||+++++++..+...
T Consensus 184 -~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~h~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-- 255 (437)
T 3gre_A 184 -LLVALTNLSRVIIFDIRTL----ERLQIIENSPRHGAVSSICID-EECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-- 255 (437)
T ss_dssp -EEEEEETTSEEEEEETTTC----CEEEEEECCGGGCCEEEEEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEEBCT--
T ss_pred -EEEEEeCCCeEEEEeCCCC----eeeEEEccCCCCCceEEEEEC-CCCCEEEEEcCCCeEEEEEcCCccEEEEEecC--
Confidence 9999999999999999954 45566665 78899999999 77899999999999999999999988887521
Q ss_pred cccCCccCCCCCceeee----cccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeec-c-CCC--
Q 016457 259 LASDSWTLDDVDYFVDC----HYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSV-L-PMP-- 330 (389)
Q Consensus 259 ~~~~~~~~~~~~~i~~~----~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~-~-~~~-- 330 (389)
|...|.++ .|++++. +|++|+.||.|++||+.+++. +..+. +|...+..+ + +.+
T Consensus 256 ---------~~~~v~~~~~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~ 317 (437)
T 3gre_A 256 ---------DHAPITHVEVCQFYGKNSV--IVVGGSSKTFLTIWNFVKGHC------QYAFI-NSDEQPSMEHFLPIEKG 317 (437)
T ss_dssp ---------TCEEEEEEEECTTTCTTEE--EEEEESTTEEEEEEETTTTEE------EEEEE-SSSSCCCGGGGSCBCSS
T ss_pred ---------CCCceEEEEeccccCCCcc--EEEEEcCCCcEEEEEcCCCcE------EEEEE-cCCCCCccceecccccc
Confidence 55789999 5556666 899999999999999998775 45554 565555544 1 211
Q ss_pred -------------cccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 331 -------------SVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 331 -------------~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.+..++|+ ++++|++|+.||.|++|++...
T Consensus 318 l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 318 LEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp GGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred cccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 12233788 7799999999999999999876
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.3e-36 Score=269.65 Aligned_cols=296 Identities=10% Similarity=0.052 Sum_probs=239.7
Q ss_pred eEEEEecC----ceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee-----eecCCCCcEEEEEEeCCC
Q 016457 22 SIKRFGLK----NSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG-----ECKGHSSTVNQISFSGPS 92 (389)
Q Consensus 22 ~i~~w~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~~~v~~i~~~~~~ 92 (389)
.|..++.. ..+..+.....+.+++|+|++.++++++.++.|++||+.+++... .+.+|...|.+++|++++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~ 181 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN 181 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC
Confidence 44445442 233344445667799999977788888888999999999988776 456799999999999988
Q ss_pred CCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEee-cCCeEEEEECcCCceeeeeeecccCCee
Q 016457 93 TPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQVACLEESHVEDVT 171 (389)
Q Consensus 93 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~v~ 171 (389)
.++++++.|+.|++||+.+++.+..+..|...+.+++|+|++..+++++ .++.|++||+++++.+..+. +...+.
T Consensus 182 --~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~ 257 (433)
T 3bws_A 182 --ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD--KIGLPR 257 (433)
T ss_dssp --EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC--CCSEEE
T ss_pred --EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec--CCCCce
Confidence 7999999999999999999999999998889999999999999987776 58999999999998888876 345699
Q ss_pred EEEEecCCCCeEEEEe--------CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCC-cEEEEEecCCcEEEE
Q 016457 172 QVHFVPNNQNKVVSAS--------VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETN-KHLWCLTHIETLSIW 242 (389)
Q Consensus 172 ~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~~~~~d~~i~i~ 242 (389)
+++|+|+++ .+++++ .|+.|++||++++. ......+...+..++|+ +++ .++++++.++.|++|
T Consensus 258 ~~~~~~~g~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~-~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 258 GLLLSKDGK-ELYIAQFSASNQESGGGRLGIYSMDKEK-----LIDTIGPPGNKRHIVSG-NTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp EEEECTTSS-EEEEEEEESCTTCSCCEEEEEEETTTTE-----EEEEEEEEECEEEEEEC-SSTTEEEEEETTTTEEEEE
T ss_pred EEEEcCCCC-EEEEEECCCCccccCCCeEEEEECCCCc-----EEeeccCCCCcceEEEC-CCCCEEEEEecCCCEEEEE
Confidence 999999996 888877 48899999998542 33334555688899999 555 456777899999999
Q ss_pred EcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC---------------CceEEEEEeccCCccc
Q 016457 243 DWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG---------------AGTVGYFPVNYGGAAT 307 (389)
Q Consensus 243 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~---------------dg~i~i~~~~~~~~~~ 307 (389)
|+.+++.+..+. +...+.+++|+|+++ +|++++. ||.|++||+.+++.
T Consensus 331 d~~~~~~~~~~~-------------~~~~~~~~~~s~dg~--~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~-- 393 (433)
T 3bws_A 331 DLKEKKVQKSIP-------------VFDKPNTIALSPDGK--YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV-- 393 (433)
T ss_dssp ETTTTEEEEEEE-------------CSSSEEEEEECTTSS--EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE--
T ss_pred ECCCCcEEEEec-------------CCCCCCeEEEcCCCC--EEEEEecCCCccccccccccccceEEEEEECCCCcE--
Confidence 999988887765 346788999999998 5555544 57999999988765
Q ss_pred cCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEec-CCCeEEEEeccC
Q 016457 308 IGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGG-EDGRLCCWLSDD 360 (389)
Q Consensus 308 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~v~iW~~~~ 360 (389)
+..+. . ...+.++ +|+|+|++|++++ .|+.|++|+++.
T Consensus 394 ----~~~~~-~-~~~~~~~---------~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 394 ----KEFWE-A-GNQPTGL---------DVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ----EEEEE-C-SSSEEEE---------EECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ----EEEec-C-CCCCceE---------EEcCCCCEEEEEECCCCeEEEEEecC
Confidence 45554 3 4567888 9999999998876 599999999874
No 105
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.5e-36 Score=260.05 Aligned_cols=306 Identities=11% Similarity=0.021 Sum_probs=221.8
Q ss_pred Cceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEE-EEEecCCeE
Q 016457 29 KNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVL-HSCSSDGTI 106 (389)
Q Consensus 29 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l-~s~~~dg~i 106 (389)
..++.+... .+.|++++|+|||++|++|+.++ ++||++++++....... ..+..+++.+++ +.+ ++++.|++|
T Consensus 9 ~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d~~v 83 (355)
T 3vu4_A 9 RNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRT--NYVAFVTGVKEVV 83 (355)
T ss_dssp ----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTS--SEEEEECSSTTEE
T ss_pred cCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCC--CEEEEEECCccEE
Confidence 344544555 88999999999999999998665 78999988776655432 247788888877 455 678888999
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCC-ceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK-KQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
++||+.+++.+..+. +...|.+++++++ .+++ +.++.|++||+.++ +.+..+. . +...+++++ . .+++
T Consensus 84 ~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~~~~-~~~~~i~i~d~~~~~~~~~~~~-~---~~~~~~~s~--~-~la~ 152 (355)
T 3vu4_A 84 HIWDDVKKQDVSRIK-VDAPVKDLFLSRE--FIVV-SYGDVISVFKFGNPWKRITDDI-R---FGGVCEFSN--G-LLVY 152 (355)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECSS--EEEE-EETTEEEEEESSTTCCBSSCCE-E---EEEEEEEET--T-EEEE
T ss_pred EEEECCCCcEEEEEE-CCCceEEEEEcCC--EEEE-EEcCEEEEEECCCCceeeEEec-c---CCceEEEEc--c-EEEE
Confidence 999999999999888 4579999999853 3433 45799999999988 7777776 3 455566777 2 5555
Q ss_pred --EeCCCcEEEEecCCCCCC-----------Ccc-ceeeeccCCceeeEEEecCCCcEEEEEecCCc-EEEEEcCCCcee
Q 016457 186 --ASVDGLICTFDTGGDIND-----------DDL-LESVINVGTSVGKVGFFGETNKHLWCLTHIET-LSIWDWKDGQNV 250 (389)
Q Consensus 186 --~~~d~~i~i~d~~~~~~~-----------~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~ 250 (389)
|+.||.|++||++++... ..+ +..+.+|...|.+++|+ +++.+|++++.|++ |++||+++++++
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s-~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN-RKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC-TTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred eCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 588999999999964200 012 56778899999999999 78899999999998 999999999999
Q ss_pred EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeec----
Q 016457 251 ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSV---- 326 (389)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~---- 326 (389)
..+.... |...|.+++|+|+++ +|++++.|+.|++||+..............+...+...+.++
T Consensus 232 ~~~~~g~----------h~~~v~~~~~s~~~~--~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 3vu4_A 232 REFRRGL----------DRADVVDMKWSTDGS--KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFK 299 (355)
T ss_dssp EEEECTT----------CCSCEEEEEECTTSC--EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEE
T ss_pred EEEEcCC----------CCCcEEEEEECCCCC--EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEE
Confidence 9887321 668999999999999 899999999999999987643110000000000111111111
Q ss_pred cCCC---cccCCCCCCCceeEEEecCCCeEEEEeccCCcc
Q 016457 327 LPMP---SVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSE 363 (389)
Q Consensus 327 ~~~~---~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~~ 363 (389)
.+.. +...++|++|+++|++++.||.+++|++....+
T Consensus 300 ~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 300 LSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp CCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred eccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 0111 112348999999999999999999999876543
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-37 Score=274.72 Aligned_cols=265 Identities=10% Similarity=0.057 Sum_probs=212.4
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 117 (389)
...|.+++|+|||+++|+++.|++|+ |...+ ..+.+|...|.+++|+|++ .++.+.+|+.+.. .+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg---------~~~~~~~~~~~~~-~~ 79 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE---------FENKLDFELAQQN-GL 79 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC---------CCCTTTTSCCCSS-CS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC---------CcceEEEEeCCCc-eE
Confidence 78899999999999999999999999 64444 4557999999999999987 4555555554322 22
Q ss_pred EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccC-----CeeEEEEecCCCCeEEEEeCCCcE
Q 016457 118 WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVE-----DVTQVHFVPNNQNKVVSASVDGLI 192 (389)
Q Consensus 118 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d~~i 192 (389)
..+ .|...|.+++|+|++..+++++.||.|++||... .+..+. |.. .+.+++|+|+|+ +|++|+.||+|
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~--~~~~~~~~sv~svafSPDG~-~LAsgs~DGtV 153 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD--SKGNLSSRTYHCFEWNPIES-SIVVGNEDGEL 153 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC--CSSCSTTTCEEEEEECSSSS-CEEEEETTSEE
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc--CCCccccccEEEEEEcCCCC-EEEEEcCCCEE
Confidence 222 3478899999999999999999999999999544 444444 443 599999999996 99999999999
Q ss_pred EEEecCCCCCCC---ccceee----eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce---eEEeecccccccC
Q 016457 193 CTFDTGGDINDD---DLLESV----INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN---VASFENARSLASD 262 (389)
Q Consensus 193 ~i~d~~~~~~~~---~~~~~~----~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~ 262 (389)
++||+.++.... ..+..+ .+|...|.+++|+ |++ +++++.|+++++||+..+.. .+++...
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS-Pdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~------ 224 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY-EDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNA------ 224 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE-TTE--EEEEETTCCEEEECCCSSSSCCCEEEEECC------
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEc-CCc--EEEEeCCCeEEEEECCCCccccceeeeccc------
Confidence 999999653101 123444 5567899999999 666 88999999999999987763 3455321
Q ss_pred CccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCC--CCC
Q 016457 263 SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPA--QSH 340 (389)
Q Consensus 263 ~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~--s~~ 340 (389)
|...|.+++|+ |+ +|++++ ++.|++||+.+++. ..+..+|...|.++ +| +||
T Consensus 225 -----h~~~V~svaFs--g~--~LASa~-~~tIkLWd~~~~~~-------~~~~~gh~~~V~~v---------a~~~s~d 278 (588)
T 2j04_A 225 -----SRRKITDLKIV--DY--KVVLTC-PGYVHKIDLKNYSI-------SSLKTGSLENFHII---------PLNHEKE 278 (588)
T ss_dssp -----CSSCCCCEEEE--TT--EEEEEC-SSEEEEEETTTTEE-------EEEECSCCSCCCEE---------EETTCSS
T ss_pred -----ccCcEEEEEEE--CC--EEEEEe-CCeEEEEECCCCeE-------EEEEcCCCceEEEE---------EeeeCCC
Confidence 66889999999 56 778886 69999999998764 34444899999999 99 999
Q ss_pred ceeEEEecCCCeEEEEecc
Q 016457 341 GIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 341 ~~~l~s~~~dg~v~iW~~~ 359 (389)
+..|+++++||+ ++|..+
T Consensus 279 ~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 279 STILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEEECSSCEE-EEEESS
T ss_pred CCEEEEEcCCCC-EEEeec
Confidence 999999999999 999986
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.1e-36 Score=269.75 Aligned_cols=258 Identities=18% Similarity=0.253 Sum_probs=222.8
Q ss_pred CccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEe
Q 016457 13 KSQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFS 89 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~ 89 (389)
..++++.|+.|++||+. +....+.+ ...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+
T Consensus 145 ~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 222 (435)
T 1p22_A 145 KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN 222 (435)
T ss_dssp EEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC
T ss_pred EEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc
Confidence 46788999999999986 46667777 889999999 77899999999999999999999999999999999999996
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCCeEE---EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecc
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSFHEV---WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (389)
+ .++++|+.||.|++||+.++... ..+.+|...|.+++| ++..+++++.||.|++||+++++.+..+. +|
T Consensus 223 ~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~ 295 (435)
T 1p22_A 223 N----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GH 295 (435)
T ss_dssp T----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-CC
T ss_pred C----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CC
Confidence 3 48999999999999999887654 677889999999999 57899999999999999999999999998 89
Q ss_pred cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 167 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
...|.++.++ + ..+++|+.||.|++||++++ ..+..+..|...|.+++| ++.+|++++.||.|++||+.+
T Consensus 296 ~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 296 KRGIACLQYR--D-RLVVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp SSCEEEEEEE--T-TEEEEEETTSCEEEEETTTC----CEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHH
T ss_pred CCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCC----CEEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCC
Confidence 9999999995 3 49999999999999999954 456777789999999998 466999999999999999976
Q ss_pred Cc---------eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 247 GQ---------NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 247 ~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+. ++..+.. |...|.+++| ++. +|++|+.||.|++||+.+...
T Consensus 366 ~~~~~~~~~~~~~~~~~~------------h~~~v~~l~~--~~~--~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 366 ALDPRAPAGTLCLRTLVE------------HSGRVFRLQF--DEF--QIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp HTSTTSCTTTTEEEEECC------------CSSCCCCEEE--CSS--CEEECCSSSEEEEEC------
T ss_pred CCCccccccchheeeccC------------CCCCeEEEEe--CCC--EEEEEeCCCEEEEEECCCCCC
Confidence 65 6666665 7789999999 566 789999999999999987654
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=3.3e-34 Score=253.86 Aligned_cols=315 Identities=12% Similarity=0.070 Sum_probs=243.3
Q ss_pred cccCCCCeEEEEecC--ceeeeeecCcceEEEeecCCCCeE-EEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCC
Q 016457 15 QSCDNVNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLM-AVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGP 91 (389)
Q Consensus 15 ~s~~~~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~ 91 (389)
++++.++.|++||+. +.+..+.+...+.+++|+|++++| ++++.++.|++||+.+++.+..+..+. .+.+++|+|+
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spd 84 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPD 84 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTT
T ss_pred EEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCC
Confidence 467889999999986 455566666679999999999877 566689999999999999988888655 8999999999
Q ss_pred CCCCEEE-EEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEE-EeecCCeEEEEECcCCceeeeeeecccCC
Q 016457 92 STPHVLH-SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLL-AAGCGSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 92 ~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+ ++|+ +++.++.|++||+.+++.+..+..+ ..+.+++|+|+++.++ +++.++.|++||+++++.+..+. . ...
T Consensus 85 g--~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~-~~~ 159 (391)
T 1l0q_A 85 G--KQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS-V-GRS 159 (391)
T ss_dssp S--SEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-C-CSS
T ss_pred C--CEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe-c-CCC
Confidence 9 5664 5556799999999999998888865 6789999999999885 55559999999999999888887 3 456
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe---cCCcEEEEEcCC
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT---HIETLSIWDWKD 246 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~ 246 (389)
+.+++|+|+++.++++++.++.|++||++++. ......+...+.+++|+ ++++++++++ .++.|++||+.+
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-----~~~~~~~~~~~~~~~~~-~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-----VIDTVKVEAAPSGIAVN-PEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----EEEEEECSSEEEEEEEC-TTSSEEEEEEECSSCCEEEEEETTT
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCe-----EEEEEecCCCccceEEC-CCCCEEEEEecCcCCCcEEEEECCC
Confidence 79999999996334678889999999998542 33334466788999999 6777788777 689999999999
Q ss_pred CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeee-
Q 016457 247 GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRS- 325 (389)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~- 325 (389)
++.+..+..+ ..+.+++|+|+++. ++++++.|+.|++||+.+++. +..+. .|..+...
T Consensus 234 ~~~~~~~~~~-------------~~~~~~~~s~dg~~-l~~s~~~d~~v~v~d~~~~~~------~~~~~-~~~~~~~~~ 292 (391)
T 1l0q_A 234 NKITARIPVG-------------PDPAGIAVTPDGKK-VYVALSFXNTVSVIDTATNTI------TATMA-VGKNPYASG 292 (391)
T ss_dssp TEEEEEEECC-------------SSEEEEEECTTSSE-EEEEETTTTEEEEEETTTTEE------EEEEE-CSSSEECCS
T ss_pred CeEEEEEecC-------------CCccEEEEccCCCE-EEEEcCCCCEEEEEECCCCcE------EEEEE-CCcCCCccc
Confidence 9888877652 35788999999983 236778999999999998776 45554 44433221
Q ss_pred --c--cCCCccc-CCCCCCCc----------eeEEEecCCCeEEEEeccCCc
Q 016457 326 --V--LPMPSVQ-GRPAQSHG----------IFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 326 --~--~~~~~~~-~~~~s~~~----------~~l~s~~~dg~v~iW~~~~~~ 362 (389)
+ .+....+ ...|+.+. ..+.+.+.|..+++|++.++.
T Consensus 293 ~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 293 QFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp SCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC
T ss_pred eeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc
Confidence 1 1211111 12343322 456777889999999998763
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=261.98 Aligned_cols=272 Identities=9% Similarity=0.009 Sum_probs=214.4
Q ss_pred EEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc---------C
Q 016457 43 EIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR---------S 113 (389)
Q Consensus 43 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~---------~ 113 (389)
...+.+++.+|++|+.||.|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.. +
T Consensus 41 ~~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 41 NKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-----IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp CSSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-----EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred hhhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-----eEEecCCCeEEEEEccCceEEeecCC
Confidence 34566788999999999999999999998888776 466778888764 9999999999999665 4
Q ss_pred CeEEEEEE-cCCCCeEEEEEeC--CCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 114 FHEVWSVT-AGSQEIFCFSFGG--STDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 114 ~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
++.+..+. .|...|.+++|+| ++..+++++.||.|++||+++++.+......+...+++++|+|++. +|++|+.||
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~~dg 192 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYSPDG 192 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEECTTS
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEcCCC
Confidence 55455555 5668899999999 8999999999999999999999887666535666899999999995 999999999
Q ss_pred cEEEEecCCCCCCCccc-eeeec-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCC
Q 016457 191 LICTFDTGGDINDDDLL-ESVIN-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDD 268 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (389)
.|++||++++. .+ ..+.. |..+|.+++|+ +++.+|++++ ++.|++||+++++.+..+.... .|
T Consensus 193 ~i~iwd~~~~~----~~~~~~~~~h~~~v~~l~fs-~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~---------~~ 257 (343)
T 3lrv_A 193 ILDVYNLSSPD----QASSRFPVDEEAKIKEVKFA-DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYT---------IP 257 (343)
T ss_dssp CEEEEESSCTT----SCCEECCCCTTSCEEEEEEC-TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCB---------C-
T ss_pred EEEEEECCCCC----CCccEEeccCCCCEEEEEEe-CCCCEEEEEe-CCeEEEEEcCCCCcceeecccc---------cc
Confidence 99999999653 23 45555 89999999999 7888999999 5599999999887665544311 02
Q ss_pred CCce--eeecccCCCCeEEEEEecC-CceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCC---Cce
Q 016457 269 VDYF--VDCHYPGEGENLWVIGGTG-AGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQS---HGI 342 (389)
Q Consensus 269 ~~~i--~~~~~~~~~~~~~l~~g~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~---~~~ 342 (389)
...+ .+++|+|+++ +|++++. |+.|++|++..... .... .++..+ +|++ +.+
T Consensus 258 ~~~~~~~~~~~~~~g~--~l~~~s~~d~~i~v~~~~~~~~------~~~~-----~~~~~~---------~~~~~~~~~~ 315 (343)
T 3lrv_A 258 EFKTGTVTYDIDDSGK--NMIAYSNESNSLTIYKFDKKTK------NWTK-----DEESAL---------CLQSDTADFT 315 (343)
T ss_dssp ----CCEEEEECTTSS--EEEEEETTTTEEEEEEECTTTC------SEEE-----EEEEEC---------CC----CCCC
T ss_pred cccccceEEEECCCCC--EEEEecCCCCcEEEEEEccccc------ceEe-----cCceeE---------ecCccccccc
Confidence 2233 3699999999 8888887 99999999976543 1111 566777 7887 888
Q ss_pred eEEEecCCCeEEEEecc
Q 016457 343 FGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 343 ~l~s~~~dg~v~iW~~~ 359 (389)
.|++++.||.++++-..
T Consensus 316 ~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 316 DMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred eeEEEecCCceEEEEec
Confidence 89999999999988543
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-36 Score=265.15 Aligned_cols=263 Identities=10% Similarity=0.073 Sum_probs=203.0
Q ss_pred CCeEEEEecCce------------eeeeec-CcceEEEeecCCCCeEEEEe-----------cCCeEEEEeCCCceee--
Q 016457 20 VNSIKRFGLKNS------------IQTNFG-DDYVFEIVPKNDWSLMAVSL-----------STNVVKLYSPVTGQYS-- 73 (389)
Q Consensus 20 ~~~i~~w~~~~~------------~~~~~~-~~~v~~~~~~~~~~~l~~~~-----------~d~~i~iw~~~~~~~~-- 73 (389)
++.|++|++... ...+.+ .+.|.++++++ +.+++|. .|+.+++|++.+.+..
T Consensus 42 ~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~ 119 (365)
T 4h5i_A 42 PNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLE 119 (365)
T ss_dssp CEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEE
T ss_pred CCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEE
Confidence 446999997421 112334 66788887654 4666654 4678999997654321
Q ss_pred --ee-----ecCCCCcEEEEEEeCCCCCCEEEE--EecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec
Q 016457 74 --GE-----CKGHSSTVNQISFSGPSTPHVLHS--CSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 74 --~~-----~~~~~~~v~~i~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 144 (389)
.. ...+...+.+++|+|++ +++++ ++.|++|+|||+.+++++..+. |...|.+++|+|++..+++++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~v~fSpDg--~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~ 196 (365)
T 4h5i_A 120 FLTSVDFDASTNADDYTKLVYISREG--TVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG 196 (365)
T ss_dssp EEEEECSSCCCCTTCCEEEEEECTTS--SCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS
T ss_pred EeeeeceeecCCcccCEEEEEEcCCC--CEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc
Confidence 11 12345568999999999 67654 5578999999999999999887 5688999999999888877764
Q ss_pred CCeEEEEECcCCceeee-eeecccCCeeEEEEecCCCCeEEEEeCCC----cEEEEecCCCCCCCccceeeeccCCceee
Q 016457 145 GSQIQFWDWRNKKQVAC-LEESHVEDVTQVHFVPNNQNKVVSASVDG----LICTFDTGGDINDDDLLESVINVGTSVGK 219 (389)
Q Consensus 145 d~~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~i~~ 219 (389)
+.+.+|+..+++.+.. ....|...|.+++|+|++. .+++++.|+ .+++||+............+..|...|.+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~ 274 (365)
T 4h5i_A 197 -SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITS 274 (365)
T ss_dssp -SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEE
T ss_pred -eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEe
Confidence 5677777777765533 2236888999999999996 999998887 58889887543222234456678889999
Q ss_pred EEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 220 VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 220 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
++|+ |++++|++|+.|++|+|||+.+++++..+.. +|...|++++|+|||+ +|++|+.|++|+||+
T Consensus 275 ~~~S-pdg~~lasgs~D~~V~iwd~~~~~~~~~~~~-----------gH~~~V~~v~fSpdg~--~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 275 MDVD-MKGELAVLASNDNSIALVKLKDLSMSKIFKQ-----------AHSFAITEVTISPDST--YVASVSAANTIHIIK 340 (365)
T ss_dssp EEEC-TTSCEEEEEETTSCEEEEETTTTEEEEEETT-----------SSSSCEEEEEECTTSC--EEEEEETTSEEEEEE
T ss_pred EEEC-CCCCceEEEcCCCEEEEEECCCCcEEEEecC-----------cccCCEEEEEECCCCC--EEEEEeCCCeEEEEE
Confidence 9999 7899999999999999999999999888642 1789999999999999 899999999999999
Q ss_pred eccC
Q 016457 300 VNYG 303 (389)
Q Consensus 300 ~~~~ 303 (389)
+...
T Consensus 341 ip~~ 344 (365)
T 4h5i_A 341 LPLN 344 (365)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9754
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-35 Score=265.86 Aligned_cols=249 Identities=14% Similarity=0.130 Sum_probs=212.0
Q ss_pred CcceEEEeecCC-CCeEEEEecCCeEEEEeCCC----------ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeE
Q 016457 38 DDYVFEIVPKND-WSLMAVSLSTNVVKLYSPVT----------GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTI 106 (389)
Q Consensus 38 ~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i 106 (389)
.+.|++++|+|+ +.+||+++.+|.|++|++.+ .+.+..+.+|...|.+++|+|++. .+|++|+.||.|
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~-~~l~s~~~dg~i 206 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLN-GYLLSASDDHTI 206 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTST-TEEEEECTTSCE
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCC-CeEEEEeCCCeE
Confidence 889999999997 68999999999999999986 577788899999999999999983 399999999999
Q ss_pred EEEEccCCeE-------EEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECcCC---ceeeeeeecccCCeeEEEE
Q 016457 107 RAWDTRSFHE-------VWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWRNK---KQVACLEESHVEDVTQVHF 175 (389)
Q Consensus 107 ~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~ 175 (389)
++|++.++.. ...+..|...|.+++|+| .+..+++++.|+.|++||++++ +.+..+. .|...|++++|
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~ 285 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSF 285 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEE
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEe
Confidence 9999987321 456778899999999999 4566677778999999999987 5667776 89999999999
Q ss_pred ecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCC--------
Q 016457 176 VPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDG-------- 247 (389)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-------- 247 (389)
+|+++.+|++|+.||.|++||+++. ...+..+..|...|.+++|+|.+..+|++++.|+.|++||+...
T Consensus 286 ~p~~~~~l~tg~~dg~v~vwd~~~~---~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 286 NPYSEFILATGSADKTVALWDLRNL---KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCT---TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHH
T ss_pred CCCCCCEEEEEeCCCeEEEEeCCCC---CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccc
Confidence 9999768999999999999999953 24567777899999999999555568999999999999999862
Q ss_pred ------ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 248 ------QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 248 ------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
+.+..+.+ |...|.+++|+|+++. +|++++.||.|++|++....
T Consensus 363 ~~~~~~~~~~~~~~------------h~~~v~~~~~~p~~~~-~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 363 AEDGPPELLFIHGG------------HTAKISDFSWNPNEPW-IICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp HHHCCTTEEEECCC------------CSSCEEEEEECSSSTT-EEEEEETTSEEEEEEECHHH
T ss_pred cccCCcceEEEcCC------------CCCCceEEEECCCCCC-EEEEEECCCCEEEeEccccc
Confidence 34444444 6789999999999874 47889999999999997643
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-36 Score=287.78 Aligned_cols=256 Identities=13% Similarity=0.188 Sum_probs=213.8
Q ss_pred eeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc--CCeEEEEEEcCCCCeEEEEEeCC--CCeEEEeecCCeEE
Q 016457 74 GECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR--SFHEVWSVTAGSQEIFCFSFGGS--TDYLLAAGCGSQIQ 149 (389)
Q Consensus 74 ~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~ 149 (389)
..+.+|.+.|++++|+|++ ++|++|+.||+|++||+. +++.+..+.+|...|++++|+|+ +..+++++.||.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~dg--~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG--KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCSSS--CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECCCC--CeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 4578899999999999999 799999999999999998 56778889999999999999987 88999999999999
Q ss_pred EEECcCCc--eeeeeeecccCCeeEEEEecC--CCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecC
Q 016457 150 FWDWRNKK--QVACLEESHVEDVTQVHFVPN--NQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE 225 (389)
Q Consensus 150 iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 225 (389)
+||+++++ .+..+. .|...|++++|+|+ +. .+++|+.||.|++||++++. .........|...|.+++|+|.
T Consensus 81 vwd~~~~~~~~~~~~~-~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~--~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 81 IWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENG--TTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSS--CCCCEEEECCSSCEEEEEECCC
T ss_pred EEECCCCccccccccc-CCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCC--CcceeEeecCCCceEEEEecCc
Confidence 99999886 566666 79999999999999 74 99999999999999999652 2334556778999999999953
Q ss_pred ------------CCcEEEEEecCCcEEEEEcCCCc----eeEEeecccccccCCccCCCCCceeeecccCC---CCeEEE
Q 016457 226 ------------TNKHLWCLTHIETLSIWDWKDGQ----NVASFENARSLASDSWTLDDVDYFVDCHYPGE---GENLWV 286 (389)
Q Consensus 226 ------------~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l 286 (389)
++.++++++.||.|++||++++. ....+.. |...|.+++|+|+ +. +|
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~------------h~~~V~~l~~sp~~~~~~--~l 222 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG------------HSDWVRDVAWSPTVLLRS--YL 222 (753)
T ss_dssp C---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC------------CSSCEEEEEECCCCSSSE--EE
T ss_pred ccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC------------CCCcEEEEEeccCCCCCC--EE
Confidence 57899999999999999998773 3444444 7799999999999 66 88
Q ss_pred EEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 287 IGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 287 ~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
++|+.||.|++||+.+++..... .+... .+|...|.++ +|+|+|++|++|+.||.|++|++..
T Consensus 223 ~s~s~Dg~I~iwd~~~~~~~~~~-~~~~~-~~~~~~v~~l---------~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 223 ASVSQDRTCIIWTQDNEQGPWKK-TLLKE-EKFPDVLWRA---------SWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEESSSCEEEEEESSSSSCCBC-CBSSS-SCCSSCCCCE---------EECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEecCCEEEEecCCCCCCccee-EEecc-CCCCCceEEE---------EEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999986421110 01112 2577888888 9999999999999999999999985
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=5.1e-36 Score=265.12 Aligned_cols=301 Identities=10% Similarity=0.077 Sum_probs=207.4
Q ss_pred CcceEEEeec---CCCCeEEEEecCCeEEEEeCCCc----------eeeeeecCCCCcEEEEEEeC--------------
Q 016457 38 DDYVFEIVPK---NDWSLMAVSLSTNVVKLYSPVTG----------QYSGECKGHSSTVNQISFSG-------------- 90 (389)
Q Consensus 38 ~~~v~~~~~~---~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~v~~i~~~~-------------- 90 (389)
....+++.|. |++..+++++.++.|.+|+.... ..+..+ .+...+..+.|.+
T Consensus 15 ~~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (393)
T 4gq1_A 15 NVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI-QTGLPTLHLSFSSSCSYSENLHDGDGN 93 (393)
T ss_dssp TCCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE-ECSSCEEEEEECTTCEEECC-------
T ss_pred CCCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE-ecCCCeeeEeecCCccccccccCCCcc
Confidence 3445566663 44444444455888999975321 111111 2344455555543
Q ss_pred ------CCCCCEEEEEecCCeEEEEEccCCeEEE-----EEEcCCCCeEEEEEeC--------CCCeEEEeecCCeEEEE
Q 016457 91 ------PSTPHVLHSCSSDGTIRAWDTRSFHEVW-----SVTAGSQEIFCFSFGG--------STDYLLAAGCGSQIQFW 151 (389)
Q Consensus 91 ------~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~iw 151 (389)
++ .+|++++.|++|+|||+++++... .+.+|...|++++|+| ++..|++++.|++|++|
T Consensus 94 ~~~~~~~~--~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~W 171 (393)
T 4gq1_A 94 VNSSPVYS--LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIW 171 (393)
T ss_dssp ---CCEEE--EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEE
T ss_pred eeecCCCC--CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEE
Confidence 33 579999999999999999886543 3567999999999997 56788888999999999
Q ss_pred ECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCcc---------------------ceee
Q 016457 152 DWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDL---------------------LESV 210 (389)
Q Consensus 152 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---------------------~~~~ 210 (389)
|++++.++..+. .|...+.+++|+|++.++|++++.|+.|++||++++...... ....
T Consensus 172 d~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 250 (393)
T 4gq1_A 172 RLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHS 250 (393)
T ss_dssp EEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-----
T ss_pred ECCCCceeeeec-CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeec
Confidence 999888887777 799999999999998668999999999999999876421111 0112
Q ss_pred eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccC-Cc-----cCCCCCceeeecccCCCCeE
Q 016457 211 INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASD-SW-----TLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 211 ~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~i~~~~~~~~~~~~ 284 (389)
..|...+.++.|+++++..+++++.|+++++||+..++....+..+...... .+ ..........+.++|...+.
T Consensus 251 ~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 251 SGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp -CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred ccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 3566788999999889999999999999999999887766555432110000 00 00122334445566655555
Q ss_pred EEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 285 WVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
++++|+.||.|++||+.+++. +..+. +|..+|+++ +|+|||++||++++|| +.+|++.
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~------~~~~~-~~~~~V~sv---------afspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDS------NSIPI-QLGMPIVDF---------CWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTC------CEEEE-ECSSCEEEE---------EECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEEECCCCEEEEEECCCCcE------EEEec-CCCCcEEEE---------EEcCCCCEEEEEeCCC-eEEEEEe
Confidence 889999999999999998776 45554 788899999 9999999999999665 6677664
No 114
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=266.58 Aligned_cols=265 Identities=9% Similarity=0.119 Sum_probs=204.2
Q ss_pred CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe-----------EEEEEEcCC------------CCeEEEEEeCC
Q 016457 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH-----------EVWSVTAGS------------QEIFCFSFGGS 135 (389)
Q Consensus 79 ~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~ 135 (389)
+.+.|++++|+|++ ++|++|+.||.|+|||+.+++ ....+.+|. ..|++++|+|+
T Consensus 27 ~~~~V~~v~~s~~g--~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSG--ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp GGGSEEEEEECSSS--SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccCcEEEEEECCCC--CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 67899999999999 799999999999999999876 578899998 88999999998
Q ss_pred C--CeEEEeecCCeEEEEECcCCcee---------------------------------------eeeeecccCCeeEEE
Q 016457 136 T--DYLLAAGCGSQIQFWDWRNKKQV---------------------------------------ACLEESHVEDVTQVH 174 (389)
Q Consensus 136 ~--~~l~~~~~d~~i~iwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~~ 174 (389)
+ ..+++++.|+.|++||+.++... ..+..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 78999999999999999864432 122237999999999
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccce-------eeeccCCceeeEEEecCCC-cEEEEEecCCcEEEEEcCC
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLE-------SVINVGTSVGKVGFFGETN-KHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 246 (389)
|+|++. +|++| .|+.|++||+++.. ..+. .+..|...|.+++|+ +++ .+|++++.|+.|++||+++
T Consensus 185 ~~~~~~-~l~s~-~d~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 185 INSDYE-TYLSA-DDLRINLWHLEITD---RSFNIVDIKPANMEELTEVITAAEFH-PNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp ECTTSS-EEEEE-CSSEEEEEETTEEE---EEEEEEECCCSSGGGCCCCEEEEEEC-SSCTTEEEEEETTSCEEEEETTT
T ss_pred EcCCCC-EEEEe-CCCeEEEEECCCCC---ceeeeeecccccccccCcceEEEEEC-CCCCcEEEEEeCCCeEEEEECcC
Confidence 999995 99998 79999999998321 1111 245788899999999 555 8999999999999999999
Q ss_pred Cce----eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc-CCccccCCCeEEEecccce
Q 016457 247 GQN----VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY-GGAATIGPPEAVLVGGHTA 321 (389)
Q Consensus 247 ~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~h~~ 321 (389)
++. +..+..+..........+|...|.+++|+|+++ +|++++. |.|++||+.+ ++. +..+. +|..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~-~~v~iwd~~~~~~~------~~~~~-~~~~ 328 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR--YMMTRDY-LSVKVWDLNMENRP------VETYQ-VHEY 328 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS--EEEEEES-SEEEEEETTCCSSC------SCCEE-SCGG
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCC--EEEEeeC-CeEEEEeCCCCccc------cceee-cccc
Confidence 886 677765321110000011223899999999999 8899988 9999999986 544 45555 6764
Q ss_pred eeeecc---CCC---cccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 322 VVRSVL---PMP---SVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 322 ~v~~~~---~~~---~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.+..++ ... ..+.++|+|++++|++|+.||.|++|++...
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 333210 000 1112389999999999999999999999876
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.9e-35 Score=253.06 Aligned_cols=255 Identities=15% Similarity=0.138 Sum_probs=205.3
Q ss_pred eecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe---EEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEE
Q 016457 75 ECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH---EVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQF 150 (389)
Q Consensus 75 ~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i 150 (389)
...+|.+.|.+++|+|++ .+|++++.|+.|++|++.++. ....+..|...|.+++|+|++. .+++++.||.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~~--~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSK--SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCCSSCEEEEEEEGGG--TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cccCCCCcEEEEEEcCCC--CEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 345799999999999998 799999999999999998876 3455668899999999999999 8999999999999
Q ss_pred EEC-cCCceeeeeeec--ccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC-----CccceeeeccCCceeeEEE
Q 016457 151 WDW-RNKKQVACLEES--HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND-----DDLLESVINVGTSVGKVGF 222 (389)
Q Consensus 151 wd~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 222 (389)
||+ .+++. ..+. + |...|.+++|+| + ..|++++.|+.|++||+++.... ...+..+ .+...+.+++|
T Consensus 84 wd~~~~~~~-~~~~-~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 158 (342)
T 1yfq_A 84 VDLIGSPSF-QALT-NNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDT 158 (342)
T ss_dssp ECSSSSSSE-EECB-SCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEE
T ss_pred EEeccCCce-Eecc-ccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCeeeEE-eeCCceEEEEe
Confidence 999 77654 5555 7 999999999999 7 49999999999999999851000 1222223 37889999999
Q ss_pred ecCCCcEEEEEecCCcEEEEEcCC-CceeEEeecccccccCCccCCCCCceeeecccC-CCCeEEEEEecCCceEEEEEe
Q 016457 223 FGETNKHLWCLTHIETLSIWDWKD-GQNVASFENARSLASDSWTLDDVDYFVDCHYPG-EGENLWVIGGTGAGTVGYFPV 300 (389)
Q Consensus 223 ~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~g~~dg~i~i~~~ 300 (389)
+ +++ +++++.|+.|++||+++ +.......... |...+.+++|+| +++ ++++|+.||.|++|++
T Consensus 159 ~-~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~i~~i~~~~~~~~--~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 159 N-SSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESG----------LKYQIRDVALLPKEQE--GYACSSIDGRVAVEFF 223 (342)
T ss_dssp C-SSE--EEEEESTTEEEEEESSCCTTCCCEEEECS----------CSSCEEEEEECSGGGC--EEEEEETTSEEEEEEC
T ss_pred c-CCc--EEEEeCCCeEEEEECCccccccceeeecC----------CCCceeEEEECCCCCC--EEEEEecCCcEEEEEE
Confidence 8 443 99999999999999988 54322211111 668899999999 998 8899999999999999
Q ss_pred ccCCccccCCCeEEEecccce---------eeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 301 NYGGAATIGPPEAVLVGGHTA---------VVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..........+...+. +|.. .|.++ +|+|++++|++|+.||.|++|++...
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~---------~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFR-CHRLNLKDTNLAYPVNSI---------EFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CTTCCSTTCTTCEEEE-CCCCCTTCCSSCCCEEEE---------EECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cCCCcccccccceeee-cccccccccccceeEEEE---------EEcCCCCEEEEecCCceEEEEcCccH
Confidence 8761000112245554 6654 89999 99999999999999999999999866
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-35 Score=257.85 Aligned_cols=288 Identities=9% Similarity=0.007 Sum_probs=218.0
Q ss_pred CCCCccccCCCCeEEEEecCceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEE
Q 016457 10 SQPKSQSCDNVNSIKRFGLKNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISF 88 (389)
Q Consensus 10 ~~~~~~s~~~~~~i~~w~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~ 88 (389)
+-...||++.|++|+ + .+....+.+ ...|++++|+|+| .++.+.+|+.+ +.....+ .|...|.+++|
T Consensus 26 DG~~iASas~D~TV~--d-~~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~-~~~~~~~-~~~~~V~~vaw 93 (588)
T 2j04_A 26 DGTLYLTTFPDISIG--Q-PKYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQ-QNGLLNS-QPVCYPRVCKP 93 (588)
T ss_dssp TSCEEEECSSSEEEE--E-ECCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC-SSCSSTT-SCSCCEEEEEE
T ss_pred CCCEEEEEcCCceee--c-ccccceecCCCccEEEEEECCCC-------CcceEEEEeCC-CceEeec-CCCCcEEEEEE
Confidence 444688999999999 5 333344456 8999999999999 35555555533 2223333 46889999999
Q ss_pred eCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCC-----CeEEEEEeCCCCeEEEeecCCeEEEEECcCCce-----
Q 016457 89 SGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ-----EIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ----- 158 (389)
Q Consensus 89 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~----- 158 (389)
+|+| ..||+++.||+|++||... .+..+. |.. .|.+++|+|+++.|++++.||+|++||+.++..
T Consensus 94 SPdG--~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 94 SPID--DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp CSSS--SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred CCCC--CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 9999 7999999999999999654 666666 654 599999999999999999999999999998753
Q ss_pred --eeeee---ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceee-eccCCceeeEEEecCCCcEEEE
Q 016457 159 --VACLE---ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV-INVGTSVGKVGFFGETNKHLWC 232 (389)
Q Consensus 159 --~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~ 232 (389)
+.++. .+|...|.+++|+|++ +++++.|+.|++||+.++. .......+ ..|...|.+++|+ ++.|++
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~-~~~~~~tL~~~h~~~V~svaFs---g~~LAS 241 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASS-HQPVSRMIQNASRRKITDLKIV---DYKVVL 241 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSS-SCCCEEEEECCCSSCCCCEEEE---TTEEEE
T ss_pred eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCc-cccceeeecccccCcEEEEEEE---CCEEEE
Confidence 45652 3678899999999986 8888999999999998543 11112334 3677899999998 368888
Q ss_pred EecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecc--cCCCCeEEEEEecCCceEEEEEeccCCc-----
Q 016457 233 LTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHY--PGEGENLWVIGGTGAGTVGYFPVNYGGA----- 305 (389)
Q Consensus 233 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~l~~g~~dg~i~i~~~~~~~~----- 305 (389)
++ +++|++||+.+++......+ |...+.++.| +|++. .|+++++||. ++|....-..
T Consensus 242 a~-~~tIkLWd~~~~~~~~~~~g------------h~~~V~~va~~~s~d~~--~La~a~edG~-klw~~d~~~~spd~~ 305 (588)
T 2j04_A 242 TC-PGYVHKIDLKNYSISSLKTG------------SLENFHIIPLNHEKEST--ILLMSNKTSY-KVLLEDELHVTADNI 305 (588)
T ss_dssp EC-SSEEEEEETTTTEEEEEECS------------CCSCCCEEEETTCSSCE--EEEECSSCEE-EEEESSSEEEECCCS
T ss_pred Ee-CCeEEEEECCCCeEEEEEcC------------CCceEEEEEeeeCCCCC--EEEEEcCCCC-EEEeeccEEECCCce
Confidence 87 69999999998766433324 7799999999 99987 8899999999 9998642110
Q ss_pred ------------cccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEec
Q 016457 306 ------------ATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGG 348 (389)
Q Consensus 306 ------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~ 348 (389)
...+.++..+. +...|+++ +|||||+.+|+++
T Consensus 306 l~a~~d~~v~lW~~~g~~l~~~~--~~~~I~~v---------a~SPdG~~lA~~~ 349 (588)
T 2j04_A 306 IAPYLEKKFKKWSTIWNEFNNYE--TTLVIHGI---------SLSPDGYSIAIVY 349 (588)
T ss_dssp SHHHHHHHHHHTTTTTTSSSSSC--CEEEEEEE---------EECTTSSEEEEEE
T ss_pred EEEEcCCEEEEEECCCCceeeec--cceEEEEE---------EECCCCCEEEEEE
Confidence 00112223222 25567777 9999999999987
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.6e-33 Score=248.07 Aligned_cols=267 Identities=9% Similarity=0.022 Sum_probs=219.1
Q ss_pred CeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEE-EEEecCCeEEEEEccCCeEEEEEEcCCCCeEE
Q 016457 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVL-HSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFC 129 (389)
Q Consensus 51 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 129 (389)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++ .++ ++++.|+.|++||+.+++.+..+..+ ..+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg--~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~ 78 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDG--TKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTS--SEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCC--CEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccc
Confidence 467888889999999999999999888765 58999999999 555 67779999999999999999998876 49999
Q ss_pred EEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccce
Q 016457 130 FSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLE 208 (389)
Q Consensus 130 ~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 208 (389)
++|+|+++.+++++. ++.|++||+.+++.+..+. +...+.+++|+|+++.++++++.++.|++||+.++ ..+.
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~----~~~~ 152 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK----AVIN 152 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT----EEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEE
Confidence 999999998877765 7999999999998888876 45678999999999633478888999999999854 2333
Q ss_pred eeeccCCceeeEEEecCCCcEE-EEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEE
Q 016457 209 SVINVGTSVGKVGFFGETNKHL-WCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVI 287 (389)
Q Consensus 209 ~~~~~~~~i~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 287 (389)
.+ .....+..++|+ ++++.+ ++++.++.|++||+.+++.+..+. +...+.+++|+|+++ +|+
T Consensus 153 ~~-~~~~~~~~~~~~-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-------------~~~~~~~~~~~~~g~--~l~ 215 (391)
T 1l0q_A 153 TV-SVGRSPKGIAVT-PDGTKVYVANFDSMSISVIDTVTNSVIDTVK-------------VEAAPSGIAVNPEGT--KAY 215 (391)
T ss_dssp EE-ECCSSEEEEEEC-TTSSEEEEEETTTTEEEEEETTTTEEEEEEE-------------CSSEEEEEEECTTSS--EEE
T ss_pred EE-ecCCCcceEEEC-CCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-------------cCCCccceEECCCCC--EEE
Confidence 33 334567899999 566655 677788999999999998877765 346788999999998 556
Q ss_pred Eec---CCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeE-EEecCCCeEEEEeccCC
Q 016457 288 GGT---GAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFG-WTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 288 ~g~---~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l-~s~~~dg~v~iW~~~~~ 361 (389)
+++ .++.|++||+.+++. +..+. .|. .+.++ +|+|++++| ++++.|+.|++|++...
T Consensus 216 ~~~~~~~~~~v~~~d~~~~~~------~~~~~-~~~-~~~~~---------~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 216 VTNVDKYFNTVSMIDTGTNKI------TARIP-VGP-DPAGI---------AVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEECSSCCEEEEEETTTTEE------EEEEE-CCS-SEEEE---------EECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEecCcCCCcEEEEECCCCeE------EEEEe-cCC-CccEE---------EEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 665 689999999998765 45555 444 45777 899999877 67789999999999865
No 118
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-34 Score=251.71 Aligned_cols=273 Identities=15% Similarity=0.146 Sum_probs=202.6
Q ss_pred CCCccccCCCCeEEEEecCc------eeeeeec-CcceEEEeecC--CCCeEEEEecCCeEEEEeCCCc---------ee
Q 016457 11 QPKSQSCDNVNSIKRFGLKN------SIQTNFG-DDYVFEIVPKN--DWSLMAVSLSTNVVKLYSPVTG---------QY 72 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~~------~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~---------~~ 72 (389)
....++++.|+.|++|++.. ....+.+ ...|.+++|+| ++++|++|+.||.|++||+.++ +.
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 102 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNK 102 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEE
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcce
Confidence 34678899999999999863 4455566 88999999999 6899999999999999999876 55
Q ss_pred eeeecCCCCcEEEEEEeCC--CCCCEEEEEecCCeEEEEEccCCeEEEEEE-------------cCCCCeEEEEEeCC--
Q 016457 73 SGECKGHSSTVNQISFSGP--STPHVLHSCSSDGTIRAWDTRSFHEVWSVT-------------AGSQEIFCFSFGGS-- 135 (389)
Q Consensus 73 ~~~~~~~~~~v~~i~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~-- 135 (389)
+..+.+|...|.+++|+|+ + .+|++++.||.|++||+++++.+..+. .|...+.+++|+|+
T Consensus 103 ~~~~~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 103 LCTLNDSKGSLYSVKFAPAHLG--LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp EEEECCCSSCEEEEEECCGGGC--SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS
T ss_pred eeeecccCCceeEEEEcCCCCC--cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC
Confidence 7788899999999999998 7 799999999999999998876543332 46788999999997
Q ss_pred -CCeEEEeecCCeEEEEECcCCce--eeeeeecccCCeeEEEEecCCC---CeEEEEeCCCcEEEEecCCCCCCCcccee
Q 016457 136 -TDYLLAAGCGSQIQFWDWRNKKQ--VACLEESHVEDVTQVHFVPNNQ---NKVVSASVDGLICTFDTGGDINDDDLLES 209 (389)
Q Consensus 136 -~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 209 (389)
+..+++++.++.+.+|+...++. +..+. +|...|++++|+|++. .+|++++.||.|++||++.+... ..
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~~ 255 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSP----LA 255 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCc----cc
Confidence 88899999999998888877765 56666 7999999999999972 38999999999999999854211 11
Q ss_pred eeccCCceeeEEEecCCCcEEEE----EecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEE
Q 016457 210 VINVGTSVGKVGFFGETNKHLWC----LTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLW 285 (389)
Q Consensus 210 ~~~~~~~i~~~~~~~~~~~~l~~----~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 285 (389)
.............. .....+.. +.....+.+|+....+.+..+.+ |...|.+++|+|+++ +
T Consensus 256 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------h~~~v~~~~~s~~~~--~ 320 (351)
T 3f3f_A 256 SEESLTNSNMFDNS-ADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD------------HNGEVWSVSWNLTGT--I 320 (351)
T ss_dssp ------------------------------------CCSEEEEEEEEECT------------TSSCEEEEEECSSSC--C
T ss_pred cCCcccceeccCCC-cccccccccccccccceeeeecccccccEEEEEec------------ccccEEEEEEcCCCC--E
Confidence 11111122222222 22222222 22334555666555666677765 779999999999998 8
Q ss_pred EEEecCCceEEEEEeccCCc
Q 016457 286 VIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 286 l~~g~~dg~i~i~~~~~~~~ 305 (389)
|++|+.||.|++|++.+++.
T Consensus 321 l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEEETTSCEEEEEECTTSC
T ss_pred EEEecCCCcEEEEecCcCcc
Confidence 89999999999999998765
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.1e-33 Score=243.41 Aligned_cols=262 Identities=15% Similarity=0.158 Sum_probs=206.2
Q ss_pred EEeCCCceeeeeecCCCCcEEEEEEeCC---CCCCEEEEEecCCeEEEEEccC-CeEE-EEEEcCCCCeEEEEEeCCCCe
Q 016457 64 LYSPVTGQYSGECKGHSSTVNQISFSGP---STPHVLHSCSSDGTIRAWDTRS-FHEV-WSVTAGSQEIFCFSFGGSTDY 138 (389)
Q Consensus 64 iw~~~~~~~~~~~~~~~~~v~~i~~~~~---~~~~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~ 138 (389)
.++....+.+..+.+|.+.|++++|+|+ + .+|++|+.||.|++||+.+ +..+ ..+..|...|.+++|+|++..
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g--~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPG--NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSK 100 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSS--EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCc--eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCE
Confidence 3455566778888999999999999998 5 6999999999999999987 5554 788899999999999999999
Q ss_pred EEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEE--ecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCc
Q 016457 139 LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHF--VPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTS 216 (389)
Q Consensus 139 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 216 (389)
+++++.||.|++||+++++.+... .|...|.+++| +|++. +|++++.||.|++||++++ ..+..+. ....
T Consensus 101 l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~-~~~~ 172 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQAIQIA--QHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSS----NPMMVLQ-LPER 172 (368)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCS----SCSEEEE-CSSC
T ss_pred EEEEcCCCcEEEEEcCCCCceeec--cccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCC----cEEEEEe-cCCC
Confidence 999999999999999998877654 59999999999 88885 9999999999999999964 3344444 3346
Q ss_pred eeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCC--CeEEEEEecCCce
Q 016457 217 VGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEG--ENLWVIGGTGAGT 294 (389)
Q Consensus 217 i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~l~~g~~dg~ 294 (389)
+.++.+. . ..+++++.++.+.+|++............. +......+.+.++. ....+++|+.||.
T Consensus 173 ~~~~~~~-~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 239 (368)
T 3mmy_A 173 CYCADVI-Y--PMAVVATAERGLIVYQLENQPSEFRRIESP----------LKHQHRCVAIFKDKQNKPTGFALGSIEGR 239 (368)
T ss_dssp EEEEEEE-T--TEEEEEEGGGCEEEEECSSSCEEEEECCCS----------CSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred ceEEEec-C--CeeEEEeCCCcEEEEEeccccchhhhcccc----------ccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence 6677776 2 378899999999999998765443332211 22334444444333 2224899999999
Q ss_pred EEEEEeccCCccccCCCeEEEecccce------------eeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 295 VGYFPVNYGGAATIGPPEAVLVGGHTA------------VVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 295 i~i~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
|++|++...... ..+..+. +|.. .|.++ +|+|++++|++|+.||.|++|++...
T Consensus 240 i~i~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~v~~~---------~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 240 VAIHYINPPNPA---KDNFTFK-CHRSNGTNTSAPQDIYAVNGI---------AFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EEEEESSCSCHH---HHSEEEE-CSEEC----CCCEEECCEEEE---------EECTTTCCEEEEETTSCEEEEETTTT
T ss_pred EEEEecCCCCcc---ccceeee-eeecccccccccccccceEEE---------EEecCCCEEEEEccCCeEEEEECCCC
Confidence 999999876320 1134554 6665 68888 99999999999999999999999865
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.6e-32 Score=227.88 Aligned_cols=278 Identities=12% Similarity=0.073 Sum_probs=192.8
Q ss_pred eEEEeecCCCC---eEEEEecCCeEEEEeCCCc---eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEE-EEEcc-
Q 016457 41 VFEIVPKNDWS---LMAVSLSTNVVKLYSPVTG---QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR-AWDTR- 112 (389)
Q Consensus 41 v~~~~~~~~~~---~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~-iwd~~- 112 (389)
+.++-|-..+. .+++++ ...|++|+..++ +.++++..|..+|..|.+.|+.. +++..+-.+=.++ ++-+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVY-NLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCC-SCEEEEECSSSEEEEEEECC
T ss_pred EeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCccc-ceeeeeeccccccceEEEEE
Confidence 45555655443 566776 689999999998 88999999999999999999775 4444443222221 22111
Q ss_pred -CC----eEEEEEEcCCCCeEEEEEeCCCCeEEEee---cCCeEEEEEC-cCCceeeeeeecccCCeeEEEEec---CCC
Q 016457 113 -SF----HEVWSVTAGSQEIFCFSFGGSTDYLLAAG---CGSQIQFWDW-RNKKQVACLEESHVEDVTQVHFVP---NNQ 180 (389)
Q Consensus 113 -~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~-~~~~~~~~~~~~~~~~v~~~~~~~---~~~ 180 (389)
.. .....-.+|...|.++ .+++++.++ .|+.|++|++ .+++.+..+. .|...++.++|+| ++.
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l----~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL----TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF-LMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE----TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-ECCCSSCEEEEEEEETSTT
T ss_pred CCCccccccEEEeCCCeEEEEec----CCCcEEEecccCCCCcEEEEEECCCCceeeeec-cCCCceeeEEeeccCCCCc
Confidence 11 1111112333334443 345555554 3999999999 4588888887 8999999999999 665
Q ss_pred CeEEEEeCCCcEEEEecCCCCCCCccceeeeccC---CceeeEEEecCCCcEE------------EEEecCCcEEEEEcC
Q 016457 181 NKVVSASVDGLICTFDTGGDINDDDLLESVINVG---TSVGKVGFFGETNKHL------------WCLTHIETLSIWDWK 245 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~l------------~~~~~d~~i~i~d~~ 245 (389)
.|++++.|++|+|||+.++ +.+..+..+. ..+.+++|+ +++.++ ++|+.|++|++||..
T Consensus 195 -~LaSgS~D~TIkIWDl~TG----k~l~tL~g~~~~v~~v~~vafS-pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 195 -ALLGTTIMNNIVIWNLKTG----QLLKKMHIDDSYQASVCHKAYS-EMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp -EEEEEETTSEEEEEETTTC----CEEEEEECCC---CCCEEEEEE-ETTEEEEEEC------------CCEEEEEEETT
T ss_pred -eEEEecCCCcEEEEECCCC----cEEEEEcCCCcceeeeEEEEEC-CCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 9999999999999999976 4455565543 356677899 577765 567889999999999
Q ss_pred CCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeee-
Q 016457 246 DGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVR- 324 (389)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~- 324 (389)
+++.+..+...- ..+|...+.+..++ +. ++++|+.|++|+|||+.+++. +..+. +|...+.
T Consensus 269 tgk~l~v~~~~~-------p~Gh~~~~lsg~~s--g~--~lASgS~DgTIkIWDl~tGk~------l~tL~-gH~~~vvs 330 (356)
T 2w18_A 269 TTLSVGVMLYCL-------PPGQAGRFLEGDVK--DH--CAAAILTSGTIAIWDLLLGQC------TALLP-PVSDQHWS 330 (356)
T ss_dssp TTEEEEEEEECC-------CTTCCCCEEEEEEE--TT--EEEEEETTSCEEEEETTTCSE------EEEEC-CC--CCCC
T ss_pred CCEEEEEEEeec-------cCCCcceeEccccC--CC--EEEEEcCCCcEEEEECCCCcE------EEEec-CCCCCeEE
Confidence 998877653100 00144444444444 55 789999999999999999887 67775 8876655
Q ss_pred eccCCCcccCCCCCCCceeEEEecCCCeEEEEec
Q 016457 325 SVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLS 358 (389)
Q Consensus 325 ~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~ 358 (389)
.+ +|||||++|+||+.|++|+||++
T Consensus 331 ~v---------afSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 331 FV---------KWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EE---------EECSSSSEEEEECTTSCEEEEEE
T ss_pred EE---------EECCCCCEEEEEECCCcEEEecC
Confidence 57 99999999999999999999986
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.5e-33 Score=242.28 Aligned_cols=249 Identities=14% Similarity=0.114 Sum_probs=186.2
Q ss_pred EEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEE-Ee
Q 016457 64 LYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLL-AA 142 (389)
Q Consensus 64 iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 142 (389)
||++.+.+++..+..|...|.+++|+|++ ++|++|+.++ +++|++.+++.......+ .+..+++.+.++.++ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg--~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQ--SCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ----------------CCCCCEEEECTTS--SEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEEC
T ss_pred cccccccCCccccccCCCceEEEEECCCC--CEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEE
Confidence 56677777887888999999999999999 7999888775 789999888776655543 577888888888774 45
Q ss_pred ecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEE
Q 016457 143 GCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGF 222 (389)
Q Consensus 143 ~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (389)
+.|+.|++||+++++.+..+. +...|.++.++++ .++++ .++.|++||+.+.. ..+..+.. +...+++
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~---~~~~~-~~~~i~i~d~~~~~---~~~~~~~~---~~~~~~~ 145 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSRE---FIVVS-YGDVISVFKFGNPW---KRITDDIR---FGGVCEF 145 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSS---EEEEE-ETTEEEEEESSTTC---CBSSCCEE---EEEEEEE
T ss_pred CCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCC---EEEEE-EcCEEEEEECCCCc---eeeEEecc---CCceEEE
Confidence 668999999999999998886 6779999999986 34444 37899999999541 22222222 4445566
Q ss_pred ecCCCcEEEE--EecCCcEEEEEcCCCce----------------eEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 223 FGETNKHLWC--LTHIETLSIWDWKDGQN----------------VASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 223 ~~~~~~~l~~--~~~d~~i~i~d~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
+ + .++++ ++.||.|++||+.+++. +..+.+ |...|.+++|+|+++
T Consensus 146 s-~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~------------h~~~v~~~~~s~~g~-- 208 (355)
T 3vu4_A 146 S-N--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA------------HTNPIKMVRLNRKSD-- 208 (355)
T ss_dssp E-T--TEEEEEESSCTTCEEEEECCC------------------CCEEECC------------CSSCEEEEEECTTSS--
T ss_pred E-c--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc------------cCCceEEEEECCCCC--
Confidence 6 3 45655 57899999999997651 445554 779999999999999
Q ss_pred EEEEecCCce-EEEEEeccCCccccCCCeEEEecc-cceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 285 WVIGGTGAGT-VGYFPVNYGGAATIGPPEAVLVGG-HTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 285 ~l~~g~~dg~-i~i~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|++|+.||+ |++||+.+++. +..+..+ |...|.++ +|+|++++|++++.||+|++|++...
T Consensus 209 ~l~s~s~d~~~v~iwd~~~~~~------~~~~~~g~h~~~v~~~---------~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 209 MVATCSQDGTIIRVFKTEDGVL------VREFRRGLDRADVVDM---------KWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEETTCSEEEEEETTTCCE------EEEEECTTCCSCEEEE---------EECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEeCCCCEEEEEECCCCcE------EEEEEcCCCCCcEEEE---------EECCCCCEEEEEECCCEEEEEEccCC
Confidence 8999999998 99999998876 6777645 99999999 99999999999999999999999865
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-33 Score=242.11 Aligned_cols=261 Identities=12% Similarity=0.033 Sum_probs=201.7
Q ss_pred CccccCCCCeEEEEecCc--eeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCC---------Cceeeeeec-CCC
Q 016457 13 KSQSCDNVNSIKRFGLKN--SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV---------TGQYSGECK-GHS 80 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~~~~~~~~~-~~~ 80 (389)
..++++.|++|++||+.. .+..+. ...|.++.|+|+ +++++.|++|++|+.. +++.+..+. +|.
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSA 125 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCS
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCC
Confidence 467899999999999863 444443 567888899998 9999999999999765 444344443 677
Q ss_pred CcEEEEEEeC--CCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCc
Q 016457 81 STVNQISFSG--PSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 81 ~~v~~i~~~~--~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
+.|.+++|+| ++ +++++++.||+|++||+++++.+.....+ ...|.+++|+|++..+++++.||.|++||+++++
T Consensus 126 ~~v~~~~~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 126 NEIIYMYGHNEVNT--EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp SCEEEEECCC---C--CEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCEEEEEcCCCCCC--CEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 8999999999 88 79999999999999999999987766444 5579999999999999999999999999999998
Q ss_pred ee-eeeeec-ccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCcee--eEEEecCCCcEEEEE
Q 016457 158 QV-ACLEES-HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVG--KVGFFGETNKHLWCL 233 (389)
Q Consensus 158 ~~-~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~l~~~ 233 (389)
.+ ..+. . |..+|++++|+|++. +|++++ ++.|++||+++.... ..+..+..+...+. +++|+ +++++|+++
T Consensus 204 ~~~~~~~-~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~g~~l~~~ 278 (343)
T 3lrv_A 204 QASSRFP-VDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGT-LAYPTYTIPEFKTGTVTYDID-DSGKNMIAY 278 (343)
T ss_dssp SCCEECC-CCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTC-BSSCCCBC-----CCEEEEEC-TTSSEEEEE
T ss_pred CCccEEe-ccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcc-eeecccccccccccceEEEEC-CCCCEEEEe
Confidence 87 7777 5 999999999999995 999999 559999999965321 11222222333443 59999 788999999
Q ss_pred ec-CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC---CCCeEEEEEecCCceEEEEEecc
Q 016457 234 TH-IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG---EGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 234 ~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
+. |+.|++|++......... .++..+.|.+ +.. .+++++.||.+.++-...
T Consensus 279 s~~d~~i~v~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~--~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKTKNWTK----------------DEESALCLQSDTADFT--DMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp ETTTTEEEEEEECTTTCSEEE----------------EEEEECCC----CCCC--EEEEEEETTEEEEEEECS
T ss_pred cCCCCcEEEEEEcccccceEe----------------cCceeEecCccccccc--eeEEEecCCceEEEEecC
Confidence 98 999999999765433222 3466778888 666 678888999998885543
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.8e-33 Score=246.77 Aligned_cols=237 Identities=13% Similarity=0.105 Sum_probs=179.7
Q ss_pred cCCCCeEEEEecCCeEEEEeCCCcee-----eeeecCCCCcEEEEEEeC--------CCCCCEEEEEecCCeEEEEEccC
Q 016457 47 KNDWSLMAVSLSTNVVKLYSPVTGQY-----SGECKGHSSTVNQISFSG--------PSTPHVLHSCSSDGTIRAWDTRS 113 (389)
Q Consensus 47 ~~~~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~v~~i~~~~--------~~~~~~l~s~~~dg~i~iwd~~~ 113 (389)
.+++.+||+|+.|++|+|||..+++. +..+.+|.+.|++++|+| ++ ++|+||+.|++|+|||+.+
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~--~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE--QVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE--EEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC--CEEEEEECCCeEEEEECCC
Confidence 34556899999999999999988754 345789999999999998 56 7999999999999999999
Q ss_pred CeEEEEEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECcCCceeeeee------------------------ecccC
Q 016457 114 FHEVWSVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWRNKKQVACLE------------------------ESHVE 168 (389)
Q Consensus 114 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~------------------------~~~~~ 168 (389)
+.++..+..|...+.+++|+|++. .+++++.|+.|++||+++++...... .+|..
T Consensus 176 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 255 (393)
T 4gq1_A 176 EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIAS 255 (393)
T ss_dssp TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSS
T ss_pred CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccc
Confidence 998888888999999999999886 57777889999999998875432211 25777
Q ss_pred CeeEEEEe-cCCCCeEEEEeCCCcEEEEecCCCCCCCcc--------------ceeeeccCCceeeEEEecC-CCcEEEE
Q 016457 169 DVTQVHFV-PNNQNKVVSASVDGLICTFDTGGDINDDDL--------------LESVINVGTSVGKVGFFGE-TNKHLWC 232 (389)
Q Consensus 169 ~v~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--------------~~~~~~~~~~i~~~~~~~~-~~~~l~~ 232 (389)
.+.++.|. |++. .+++++.|+.+++||+.++...... ...............++++ ++.++++
T Consensus 256 ~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 334 (393)
T 4gq1_A 256 SLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATA 334 (393)
T ss_dssp SCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEE
T ss_pred cceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEE
Confidence 89999997 6775 9999999999999999854311100 0001111122334445544 4456677
Q ss_pred EecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 233 LTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 233 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++.|+.|++||+.+++....+.. |..+|.+++|+|+|+ +||+++.+| +.+|.+.
T Consensus 335 gs~Dg~V~lwd~~~~~~~~~~~~------------~~~~V~svafspdG~--~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 335 HSQHGLIQLINTYEKDSNSIPIQ------------LGMPIVDFCWHQDGS--HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp ETTTTEEEEEETTCTTCCEEEEE------------CSSCEEEEEECTTSS--EEEEEESSE-EEEEEEG
T ss_pred ECCCCEEEEEECCCCcEEEEecC------------CCCcEEEEEEcCCCC--EEEEEeCCC-eEEEEEe
Confidence 88899999999999988877766 668999999999999 889998776 6666654
No 124
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=245.87 Aligned_cols=240 Identities=13% Similarity=0.044 Sum_probs=198.8
Q ss_pred ceEEEeecCCCCeE-EEEecCCeEEEEeCC--Cceeeeeec--CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC
Q 016457 40 YVFEIVPKNDWSLM-AVSLSTNVVKLYSPV--TGQYSGECK--GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF 114 (389)
Q Consensus 40 ~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 114 (389)
.|.+++|+|++++| ++|+.||.|+|||+. +++.+..+. .|...|.+++|+|++ .+|++|+.||.|++|++.++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~~g~v~~~~~~~~ 181 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD--TTVIIADKFGDVYSIDINSI 181 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS--SEEEEEETTSEEEEEETTSC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC--CEEEEEeCCCcEEEEecCCc
Confidence 69999999999996 899999999999999 888888776 577899999999999 79999999999999999887
Q ss_pred eEEE----EEEcCCCCeEEEEEeCC---CCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEe
Q 016457 115 HEVW----SVTAGSQEIFCFSFGGS---TDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 115 ~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 187 (389)
+... .+.+|...|++++|+|+ +..+++++.|+.|++||+++++.+..+..+|...|.+++|+ ++. +|++++
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~-~l~s~~ 259 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY-LLLSAG 259 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT-EEEEEE
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC-EEEEEe
Confidence 6544 77889999999999998 88899999999999999999988877444899999999999 885 999999
Q ss_pred CCCcEEEEecCCCCCCCccceeee-------------------------ccCCceeeEEEecCCCcEEEEEe-cCCcEEE
Q 016457 188 VDGLICTFDTGGDINDDDLLESVI-------------------------NVGTSVGKVGFFGETNKHLWCLT-HIETLSI 241 (389)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~~-------------------------~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~i 241 (389)
.|+.|++||++++. .+..+. .....+..++|+ +++.+|++++ .++.|++
T Consensus 260 ~d~~v~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~-~~~~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 260 GDDKIFAWDWKTGK----NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS-KNLPFVAFFVEATKCIII 334 (450)
T ss_dssp SSSEEEEEETTTCC----EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC-SSSSEEEEEETTCSEEEE
T ss_pred CCCeEEEEECCCCc----EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe-CCCCEEEEEECCCCeEEE
Confidence 99999999999653 222222 224568899999 6788898888 8999999
Q ss_pred EEc--CCC---ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC------CceEEEEEeccC
Q 016457 242 WDW--KDG---QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG------AGTVGYFPVNYG 303 (389)
Q Consensus 242 ~d~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~------dg~i~i~~~~~~ 303 (389)
|++ .++ +.+..+.. | ..+.+++|+|++ +++++++. +..|.+|.+...
T Consensus 335 w~~~~~~~~~l~~~~~~~~------------~-~~v~~~~~~~~~--~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 335 LEMSEKQKGDLALKQIITF------------P-YNVISLSAHNDE--FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEECSSSTTCEEEEEEEEC------------S-SCEEEEEEETTE--EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEeccCCCCceeeccEecc------------C-CceEEEEecCCc--EEEEEecccCCCCCCcceEEEEEEcC
Confidence 999 555 45555554 4 789999999943 35555443 456899987653
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=5.5e-31 Score=236.40 Aligned_cols=263 Identities=10% Similarity=0.050 Sum_probs=217.5
Q ss_pred ccccCCCCeEEEEecCc--eeee-----eec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEE
Q 016457 14 SQSCDNVNSIKRFGLKN--SIQT-----NFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQ 85 (389)
Q Consensus 14 ~~s~~~~~~i~~w~~~~--~~~~-----~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~ 85 (389)
.++++.++.|++||+.. .... +.+ ...|.+++|+|++.++++++.|+.|++||+.+++.+..+..|...+.+
T Consensus 137 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 137 AIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 34566788999999863 3331 223 568999999999999999999999999999999999999889999999
Q ss_pred EEEeCCCCCCEE-EEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEee--------cCCeEEEEECcCC
Q 016457 86 ISFSGPSTPHVL-HSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAG--------CGSQIQFWDWRNK 156 (389)
Q Consensus 86 i~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~iwd~~~~ 156 (389)
++|+|++ ..+ ++++.|+.|++||+++++.+..+..+ ..+.+++|+|+++.+++++ .|+.|++||++++
T Consensus 217 ~~~~~~~--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 217 LLYDPIR--DLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEETTT--TEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEcCCC--CEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 9999998 566 45558999999999999998887764 5699999999999999988 4789999999998
Q ss_pred ceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEec-
Q 016457 157 KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTH- 235 (389)
Q Consensus 157 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~- 235 (389)
+.+..+. +...+.+++|+|+++.++++++.++.|++||+.++. ......+...+..++|+ ++++++++++.
T Consensus 294 ~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~-----~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~ 365 (433)
T 3bws_A 294 KLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK-----VQKSIPVFDKPNTIALS-PDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-----EEEEEECSSSEEEEEEC-TTSSEEEEEECC
T ss_pred cEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-----EEEEecCCCCCCeEEEc-CCCCEEEEEecC
Confidence 8877764 667899999999996466777899999999998542 22333467789999999 77788887776
Q ss_pred --------------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec-CCceEEEEEe
Q 016457 236 --------------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT-GAGTVGYFPV 300 (389)
Q Consensus 236 --------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-~dg~i~i~~~ 300 (389)
||.|++||+.+++.+..+.. ...+.+++|+|+++ +|++++ .|+.|++|++
T Consensus 366 ~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-------------~~~~~~~~~s~dg~--~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 366 PNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-------------GNQPTGLDVSPDNR--YLVISDFLDHQIRVYRR 430 (433)
T ss_dssp CCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-------------SSSEEEEEECTTSC--EEEEEETTTTEEEEEEE
T ss_pred CCccccccccccccceEEEEEECCCCcEEEEecC-------------CCCCceEEEcCCCC--EEEEEECCCCeEEEEEe
Confidence 56999999999988887764 25689999999998 666655 5999999998
Q ss_pred cc
Q 016457 301 NY 302 (389)
Q Consensus 301 ~~ 302 (389)
..
T Consensus 431 ~~ 432 (433)
T 3bws_A 431 DG 432 (433)
T ss_dssp TT
T ss_pred cC
Confidence 63
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.3e-30 Score=238.54 Aligned_cols=308 Identities=8% Similarity=-0.021 Sum_probs=239.0
Q ss_pred cccCCCCeEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeC--CCceeeeeecCCCCcEEEEEEeC
Q 016457 15 QSCDNVNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSP--VTGQYSGECKGHSSTVNQISFSG 90 (389)
Q Consensus 15 ~s~~~~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~~~~v~~i~~~~ 90 (389)
.+.+.+++|.+||.. +.+.++.....+.+++|+|||++|++++.++.|.+||+ .+++.+..+. +...+..++|+|
T Consensus 153 vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp 231 (543)
T 1nir_A 153 VTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSK 231 (543)
T ss_dssp EEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECC
T ss_pred EEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCC
Confidence 345678999999985 46677764334899999999999999999999999999 8888888887 455689999999
Q ss_pred ----CCCCCEEEEEe-cCCeEEEEEccCCeEEEEEEcC-----------CCCeEEEEEeCCCCeEEEeec-CCeEEEEEC
Q 016457 91 ----PSTPHVLHSCS-SDGTIRAWDTRSFHEVWSVTAG-----------SQEIFCFSFGGSTDYLLAAGC-GSQIQFWDW 153 (389)
Q Consensus 91 ----~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~ 153 (389)
++ +++++++ .+++|.+||..+++++..+..+ ...+.++.++|+++.++++.. ++.|.+||+
T Consensus 232 ~~~~dg--~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 232 FKGYED--RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp STTCTT--TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred CcCCCC--CEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 98 6888887 5899999999999999988753 237889999998887776665 899999999
Q ss_pred cCCceee--eeeecccCCeeEEEEecCCCCeEE-EEeCCCcEEEEecCCCCCCCccceeeec----cCCceeeEEEecCC
Q 016457 154 RNKKQVA--CLEESHVEDVTQVHFVPNNQNKVV-SASVDGLICTFDTGGDINDDDLLESVIN----VGTSVGKVGFFGET 226 (389)
Q Consensus 154 ~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~ 226 (389)
.+.+.+. .+ .+...+..+.|+|+++ +++ ++..+++|.+||+.+++ .+..+.. |......+ ++|+.
T Consensus 310 ~~~~~l~~~~i--~~~~~~~~~~~spdg~-~l~va~~~~~~v~v~D~~tg~----l~~~i~~g~~ph~g~g~~~-~~p~~ 381 (543)
T 1nir_A 310 KDIDNLTVTSI--GAAPFLHDGGWDSSHR-YFMTAANNSNKVAVIDSKDRR----LSALVDVGKTPHPGRGANF-VHPKY 381 (543)
T ss_dssp TTSSSCEEEEE--ECCSSCCCEEECTTSC-EEEEEEGGGTEEEEEETTTTE----EEEEEECSSSBCCTTCEEE-EETTT
T ss_pred cCCCcceeEEe--ccCcCccCceECCCCC-EEEEEecCCCeEEEEECCCCe----EEEeeccCCCCCCCCCccc-CCCCC
Confidence 8876544 44 3667788999999997 555 55568999999999653 3333332 33222222 35344
Q ss_pred CcEEEEEe-cCCcEEEEEcCC-------CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec-------C
Q 016457 227 NKHLWCLT-HIETLSIWDWKD-------GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT-------G 291 (389)
Q Consensus 227 ~~~l~~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-------~ 291 (389)
+.+++++. .|++|.+||+.+ .++++++.. |...+..++++|+++ +|++++ .
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~------------~g~~~~~v~~~pdg~--~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG------------QGGGSLFIKTHPKSS--HLYVDTTFNPDARI 447 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC------------SCSCCCCEECCTTCC--EEEECCTTCSSHHH
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc------------CCCCceEEEcCCCCC--cEEEecCCCCCccc
Confidence 66666665 579999999988 788898887 557788999999999 667765 2
Q ss_pred CceEEEEEeccCCccccCCCe-EEEe-------cccceeeeeccCCCcccCCCCCCCceeEEEe-----cCCCeEEEEec
Q 016457 292 AGTVGYFPVNYGGAATIGPPE-AVLV-------GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTG-----GEDGRLCCWLS 358 (389)
Q Consensus 292 dg~i~i~~~~~~~~~~~~~~~-~~~~-------~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~-----~~dg~v~iW~~ 358 (389)
+++|.+||+.+++. . ..+. ..+...+..+ +|+|+|++|+.+ +.|+.|.|||.
T Consensus 448 ~~~v~v~d~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~---------~~~~~g~~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 448 SQSVAVFDLKNLDA------KYQVLPIAEWADLGEGAKRVVQP---------EYNKRGDEVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp HTCEEEEETTCTTS------CCEEECHHHHHCCCSSCCEEEEE---------EECSSSSEEEEEEECCTTSCCEEEEEET
T ss_pred CceEEEEECCCCCC------CeEEeechhhcccCCCCCceEec---------cCCCCCCEEEEEeecCCCCCCeEEEEEC
Confidence 67999999999875 2 2321 1456778888 999999998865 35899999999
Q ss_pred cCCc
Q 016457 359 DDSS 362 (389)
Q Consensus 359 ~~~~ 362 (389)
.+..
T Consensus 513 ~t~~ 516 (543)
T 1nir_A 513 KTLK 516 (543)
T ss_dssp TTTE
T ss_pred CCce
Confidence 8773
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=3.8e-30 Score=214.90 Aligned_cols=253 Identities=14% Similarity=0.101 Sum_probs=177.8
Q ss_pred CCCeEEEEecCc-----eeeeeec-CcceEEEeecCCCC-eEEEEecCC---eEEEE--eCCC---ceeeeeecCCCCcE
Q 016457 19 NVNSIKRFGLKN-----SIQTNFG-DDYVFEIVPKNDWS-LMAVSLSTN---VVKLY--SPVT---GQYSGECKGHSSTV 83 (389)
Q Consensus 19 ~~~~i~~w~~~~-----~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~---~i~iw--~~~~---~~~~~~~~~~~~~v 83 (389)
.+..|++|+... .+++... ..+|..+.+.||-. ++.++-.+= .|+.. +.++ ++.+ .-.+|...|
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l-~s~g~~~~v 139 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVL-LKSGNIKAV 139 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEE-EEEEEEEEE
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEE-EeCCCeEEE
Confidence 356899999753 4566666 66888888888653 333333211 11111 1110 1111 113355455
Q ss_pred EEEEEeCCCCCCEEEEEe--cCCeEEEEEc-cCCeEEEEEEcCCCCeEEEEEeC---CCCeEEEeecCCeEEEEECcCCc
Q 016457 84 NQISFSGPSTPHVLHSCS--SDGTIRAWDT-RSFHEVWSVTAGSQEIFCFSFGG---STDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~--~dg~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
..+ +++ +++.+++ .|+.|++|++ .+++.+..+..|...++.++|+| ++..+++++.|++|+|||+++++
T Consensus 140 ~~l---~~g--~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk 214 (356)
T 2w18_A 140 LGL---TKR--RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ 214 (356)
T ss_dssp EEE---TTT--EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC
T ss_pred Eec---CCC--cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc
Confidence 554 455 4555533 5999999999 45888889999999999999998 66889999999999999999999
Q ss_pred eeeeeeeccc---CCeeEEEEecCCCCeE------------EEEeCCCcEEEEecCCCCCCCccceee-----eccCCce
Q 016457 158 QVACLEESHV---EDVTQVHFVPNNQNKV------------VSASVDGLICTFDTGGDINDDDLLESV-----INVGTSV 217 (389)
Q Consensus 158 ~~~~~~~~~~---~~v~~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~i 217 (389)
.+.++. +|. ..+.+++|+|++. ++ ++|+.|++|++||..++. .+..+ .+|...+
T Consensus 215 ~l~tL~-g~~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk----~l~v~~~~~p~Gh~~~~ 288 (356)
T 2w18_A 215 LLKKMH-IDDSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKTTL----SVGVMLYCLPPGQAGRF 288 (356)
T ss_dssp EEEEEE-CCC---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTTTE----EEEEEEECCCTTCCCCE
T ss_pred EEEEEc-CCCcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCCCE----EEEEEEeeccCCCccee
Confidence 999997 443 4677889999985 55 568889999999998653 22211 1333333
Q ss_pred eeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCcee-eecccCCCCeEEEEEecCCceEE
Q 016457 218 GKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFV-DCHYPGEGENLWVIGGTGAGTVG 296 (389)
Q Consensus 218 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~l~~g~~dg~i~ 296 (389)
.+..++ +.++++++.|++|+|||+.++++++++.+ |...+. .++|+|+|+ +|++|+.|++|+
T Consensus 289 lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~g------------H~~~vvs~vafSPDG~--~LaSGS~D~TIk 351 (356)
T 2w18_A 289 LEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPP------------VSDQHWSFVKWSGTDS--HLLAGQKDGNIF 351 (356)
T ss_dssp EEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECC------------C--CCCCEEEECSSSS--EEEEECTTSCEE
T ss_pred EccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecC------------CCCCeEEEEEECCCCC--EEEEEECCCcEE
Confidence 333333 56899999999999999999999999986 546555 589999999 899999999999
Q ss_pred EEEe
Q 016457 297 YFPV 300 (389)
Q Consensus 297 i~~~ 300 (389)
|||+
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9986
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=6.8e-29 Score=227.28 Aligned_cols=290 Identities=11% Similarity=0.032 Sum_probs=227.2
Q ss_pred eecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEc--cCCeEEEEEEc
Q 016457 45 VPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT--RSFHEVWSVTA 122 (389)
Q Consensus 45 ~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~--~~~~~~~~~~~ 122 (389)
+|+|++.++++++.+++|.+||..+++++..+..+.. +..++|+|++ ++|++++.|++|++||+ .+++.+.++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg--~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASG--RYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTS--CEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCC--CEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 4889999999999999999999999999999884333 8999999999 79999999999999999 88999988885
Q ss_pred CCCCeEEEEEeC----CCCeEEEeec-CCeEEEEECcCCceeeeeee-c--------ccC-CeeEEEEecCCCCeEEEEe
Q 016457 123 GSQEIFCFSFGG----STDYLLAAGC-GSQIQFWDWRNKKQVACLEE-S--------HVE-DVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 123 ~~~~v~~~~~~~----~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~-~--------~~~-~v~~~~~~~~~~~~l~~~~ 187 (389)
...+..++|+| +++++++++. ++.|.+||..+++++..+.. + |.. .+..+.++|+++.++++..
T Consensus 221 -g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 -GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp -CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred -CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 46789999999 9999999886 89999999999999888761 1 222 6889999998876788888
Q ss_pred CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEE-ecCCcEEEEEcCCCceeEEeecccccccCCccC
Q 016457 188 VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCL-THIETLSIWDWKDGQNVASFENARSLASDSWTL 266 (389)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 266 (389)
.++.|.+||+.+... .......+...+..++|+ +++++++++ ..+++|.+||+.+++++..+.....
T Consensus 300 ~~g~i~vvd~~~~~~---l~~~~i~~~~~~~~~~~s-pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~-------- 367 (543)
T 1nir_A 300 ETGKVLLVNYKDIDN---LTVTSIGAAPFLHDGGWD-SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT-------- 367 (543)
T ss_dssp TTTEEEEEECTTSSS---CEEEEEECCSSCCCEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--------
T ss_pred CCCeEEEEEecCCCc---ceeEEeccCcCccCceEC-CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC--------
Confidence 899999999985421 111233456778899999 677766655 4588999999999998888764321
Q ss_pred CCCCceeeecccCCCCeEEEEEec-CCceEEEEEeccCCc-cccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeE
Q 016457 267 DDVDYFVDCHYPGEGENLWVIGGT-GAGTVGYFPVNYGGA-ATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFG 344 (389)
Q Consensus 267 ~~~~~i~~~~~~~~~~~~~l~~g~-~dg~i~i~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l 344 (389)
+|......+ ++|++.. +++++. .|++|.+|++.+... ...++.+..+. +|...+..+ +|+|+|++|
T Consensus 368 ph~g~g~~~-~~p~~g~-~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-~~g~~~~~v---------~~~pdg~~l 435 (543)
T 1nir_A 368 PHPGRGANF-VHPKYGP-VWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-GQGGGSLFI---------KTHPKSSHL 435 (543)
T ss_dssp BCCTTCEEE-EETTTEE-EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSCSCCCCE---------ECCTTCCEE
T ss_pred CCCCCCccc-CCCCCcc-EEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE-cCCCCceEE---------EcCCCCCcE
Confidence 143333333 4677554 456664 689999999987321 11133467776 777777777 999999999
Q ss_pred EEec-------CCCeEEEEeccCCc
Q 016457 345 WTGG-------EDGRLCCWLSDDSS 362 (389)
Q Consensus 345 ~s~~-------~dg~v~iW~~~~~~ 362 (389)
++++ .+++|.+||+++..
T Consensus 436 ~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 436 YVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp EECCTTCSSHHHHTCEEEEETTCTT
T ss_pred EEecCCCCCcccCceEEEEECCCCC
Confidence 9987 27899999999764
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=6.7e-29 Score=220.79 Aligned_cols=275 Identities=10% Similarity=0.007 Sum_probs=211.5
Q ss_pred eEEEEec--C--cee--eeeec-CcceEEEeecC--------------CCCeEEEEecC------CeEEEEeCCCceeee
Q 016457 22 SIKRFGL--K--NSI--QTNFG-DDYVFEIVPKN--------------DWSLMAVSLST------NVVKLYSPVTGQYSG 74 (389)
Q Consensus 22 ~i~~w~~--~--~~~--~~~~~-~~~v~~~~~~~--------------~~~~l~~~~~d------~~i~iw~~~~~~~~~ 74 (389)
.|++||+ . +.+ ..+.+ ...+..+++++ .+..++.++.+ +.|++||+. +....
T Consensus 94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~ 172 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQF 172 (415)
T ss_dssp EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCE
T ss_pred EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCE
Confidence 8999998 4 333 33555 66677777764 15566666654 799999997 45567
Q ss_pred eecCCCCcEEEEEEeCCCCCCEEEEEecCC---eEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEe-ecCC--eE
Q 016457 75 ECKGHSSTVNQISFSGPSTPHVLHSCSSDG---TIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAA-GCGS--QI 148 (389)
Q Consensus 75 ~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~i 148 (389)
.+.+|...+.+++|+|++ +.|++++.++ .|++||+.+++.. .+..+...+.+++|+|++..|+.+ +.++ .|
T Consensus 173 ~l~~~~~~v~~~~~Spdg--~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDG--SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp EEEEESSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred EEeCCCCcceeeEEcCCC--CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceE
Confidence 777899999999999999 7999999875 9999999988775 566777899999999999988854 4444 59
Q ss_pred EEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC-CC--cEEEEecCCCCCCCccceeeeccCCceeeEEEecC
Q 016457 149 QFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV-DG--LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE 225 (389)
Q Consensus 149 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 225 (389)
++||+++++. ..+. .|...+.+++|+|+++ .|++++. ++ .|++||+.++. ...+..+...+..++|+ +
T Consensus 250 ~~~d~~~~~~-~~l~-~~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~s-p 320 (415)
T 2hqs_A 250 YVMDLASGQI-RQVT-DGRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA-----PQRITWEGSQNQDADVS-S 320 (415)
T ss_dssp EEEETTTCCE-EECC-CCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC-----CEECCCSSSEEEEEEEC-T
T ss_pred EEEECCCCCE-EeCc-CCCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC-----EEEEecCCCcccCeEEC-C
Confidence 9999998776 4555 6888899999999996 7777775 44 67778888542 33444566788899999 7
Q ss_pred CCcEEEEEecC---CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc---eEEEEE
Q 016457 226 TNKHLWCLTHI---ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG---TVGYFP 299 (389)
Q Consensus 226 ~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg---~i~i~~ 299 (389)
++++|++++.+ ..|++||+.+++.. .+.. + ..+.+++|+|+|+ +|++++.++ .|++||
T Consensus 321 dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~------------~-~~~~~~~~spdg~--~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS------------T-FLDETPSLAPNGT--MVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp TSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC------------S-SSCEEEEECTTSS--EEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEECcCCceEEEEEECCCCCEE-EecC------------C-CCcCCeEEcCCCC--EEEEEEcCCCccEEEEEE
Confidence 78888887764 58999999988763 3332 3 3788999999999 667776666 799999
Q ss_pred eccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCce
Q 016457 300 VNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI 342 (389)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~ 342 (389)
+..+.. ..+. +|.+.|.++ +|+|...
T Consensus 385 ~~g~~~-------~~l~-~~~~~v~~~---------~~~~~~~ 410 (415)
T 2hqs_A 385 TDGRFK-------ARLP-ATDGQVKFP---------AWSPYLH 410 (415)
T ss_dssp TTSCCE-------EECC-CSSSEEEEE---------EECCCCC
T ss_pred CCCCcE-------EEee-CCCCCCcCC---------ccccccc
Confidence 875543 6665 899999999 7777654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=9.3e-30 Score=226.29 Aligned_cols=278 Identities=12% Similarity=0.089 Sum_probs=215.0
Q ss_pred cceEEEeecCCCC-eEEEEe----cCC----eEEEEeC--CCceee--eeecCCCCcEEEEEEeCC--------------
Q 016457 39 DYVFEIVPKNDWS-LMAVSL----STN----VVKLYSP--VTGQYS--GECKGHSSTVNQISFSGP-------------- 91 (389)
Q Consensus 39 ~~v~~~~~~~~~~-~l~~~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~i~~~~~-------------- 91 (389)
..+...+|.+.|. ++++|+ .+| .|+|||+ .+++.+ ..+.+|...+..+++.+.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 3677788888884 565776 367 8999999 888877 458888888888877641
Q ss_pred CCCCEEEEEecC------CeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCC---eEEEEECcCCceeeee
Q 016457 92 STPHVLHSCSSD------GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS---QIQFWDWRNKKQVACL 162 (389)
Q Consensus 92 ~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~~~ 162 (389)
+ ..++.++.+ +.|++||+.. .....+..|...+.+++|+|+++.+++++.++ .|++||+++++.. .+
T Consensus 143 ~--~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 143 R--TRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp T--CEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred C--CEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 3 466666654 7999999974 45667777889999999999999999998864 9999999988775 44
Q ss_pred eecccCCeeEEEEecCCCCeEE-EEeCCCc--EEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEec-CC-
Q 016457 163 EESHVEDVTQVHFVPNNQNKVV-SASVDGL--ICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTH-IE- 237 (389)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~- 237 (389)
. .|...+.+++|+|+++ .|+ +++.++. |++||+.++. ...+..+...+..++|+ ++++.|++++. ++
T Consensus 219 ~-~~~~~~~~~~~spdg~-~la~~~~~~g~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~s-pdg~~l~~~s~~~g~ 290 (415)
T 2hqs_A 219 A-SFPRHNGAPAFSPDGS-KLAFALSKTGSLNLYVMDLASGQ-----IRQVTDGRSNNTEPTWF-PDSQNLAFTSDQAGR 290 (415)
T ss_dssp E-CCSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCC-----EEECCCCSSCEEEEEEC-TTSSEEEEEECTTSS
T ss_pred e-cCCCcccCEEEcCCCC-EEEEEEecCCCceEEEEECCCCC-----EEeCcCCCCcccceEEC-CCCCEEEEEECCCCC
Confidence 4 5788899999999996 666 6666655 9999998642 35566677889999999 77888887776 44
Q ss_pred -cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCC---ceEEEEEeccCCccccCCCeE
Q 016457 238 -TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGA---GTVGYFPVNYGGAATIGPPEA 313 (389)
Q Consensus 238 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~d---g~i~i~~~~~~~~~~~~~~~~ 313 (389)
.|.+||+.+++.. .+.. +...+..++|+|+|+ +|++++.+ +.|++||+.+++. .
T Consensus 291 ~~i~~~d~~~~~~~-~l~~------------~~~~~~~~~~spdG~--~l~~~~~~~g~~~i~~~d~~~~~~-------~ 348 (415)
T 2hqs_A 291 PQVYKVNINGGAPQ-RITW------------EGSQNQDADVSSDGK--FMVMVSSNGGQQHIAKQDLATGGV-------Q 348 (415)
T ss_dssp CEEEEEETTSSCCE-ECCC------------SSSEEEEEEECTTSS--EEEEEEECSSCEEEEEEETTTCCE-------E
T ss_pred cEEEEEECCCCCEE-EEec------------CCCcccCeEECCCCC--EEEEEECcCCceEEEEEECCCCCE-------E
Confidence 6888898877643 3332 446788999999999 66666543 6899999998765 4
Q ss_pred EEecccceeeeeccCCCcccCCCCCCCceeEEEecCCC---eEEEEeccCC
Q 016457 314 VLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDG---RLCCWLSDDS 361 (389)
Q Consensus 314 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg---~v~iW~~~~~ 361 (389)
.+. .|. .+.++ +|+|||++|++++.|+ .|++|+++..
T Consensus 349 ~l~-~~~-~~~~~---------~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 349 VLS-STF-LDETP---------SLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp ECC-CSS-SCEEE---------EECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred Eec-CCC-CcCCe---------EEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 444 443 67777 9999999999988777 7999998754
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=3.5e-27 Score=203.88 Aligned_cols=290 Identities=10% Similarity=0.046 Sum_probs=203.1
Q ss_pred eecCCCC-eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEec-CCeEEEEEccCCeE-EEEEE
Q 016457 45 VPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS-DGTIRAWDTRSFHE-VWSVT 121 (389)
Q Consensus 45 ~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~-~~~~~ 121 (389)
.|.++++ .+++++.++.|.+||..+++....+..+...+ .++|+|++ +++++++. ++.|.+||+.+++. ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDC--SNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSS--CEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCC--CEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 4555554 46677779999999999999888877766777 99999999 55655554 88999999999887 77777
Q ss_pred cCCCCeEEEEEeCCCCeEEEeecC-C--eEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCc-EEEEec
Q 016457 122 AGSQEIFCFSFGGSTDYLLAAGCG-S--QIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGL-ICTFDT 197 (389)
Q Consensus 122 ~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-i~i~d~ 197 (389)
.+..+..+++|+|+++.++++..+ + .|.+||+.+++.+..+. ......+++|+|+++.++++...++. |.+|++
T Consensus 81 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 81 EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 776666669999999999855544 3 99999999998888776 45567999999999645555566688 999999
Q ss_pred CCCCCCCccceeeeccCCceeeEEEecCCCcEEE-EEecCCcEEEEEcCCCce---eEEeecccccccCCccCCCCCcee
Q 016457 198 GGDINDDDLLESVINVGTSVGKVGFFGETNKHLW-CLTHIETLSIWDWKDGQN---VASFENARSLASDSWTLDDVDYFV 273 (389)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 273 (389)
...................+..++|+ +++++++ ++..++.|.+||+.+++. +..+.. ...+.
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-------------~~~~~ 224 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFT-PDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-------------NNLPG 224 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEEC-TTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-------------SSCCC
T ss_pred CCCCcEeecCCccccCCCCccceEEC-CCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-------------CCCCc
Confidence 84321111102223445567899999 6777554 455688999999998887 665553 25678
Q ss_pred eecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEE-ecCCCe
Q 016457 274 DCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWT-GGEDGR 352 (389)
Q Consensus 274 ~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s-~~~dg~ 352 (389)
.++|+|+|+.+ +++...++.|.+||..+++... +..+. .+ -.+..- +......++|+|||++|+. +..++.
T Consensus 225 ~~~~spdg~~l-~v~~~~~~~i~~~d~~~~~~~~----~~~~~-~~-~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~ 296 (331)
T 3u4y_A 225 TIVVSRDGSTV-YVLTESTVDVFNFNQLSGTLSF----VKSFG-HG-LLIDPR-PLFGANQMALNKTETKLFISANISRE 296 (331)
T ss_dssp CEEECTTSSEE-EEECSSEEEEEEEETTTTEEEE----EEEEE-CC-CCCCCG-GGTTCCCEEECTTSSEEEEEETTTTE
T ss_pred eEEECCCCCEE-EEEEcCCCEEEEEECCCCceee----ecccc-cc-cccCCC-CcccccceEECCCCCEEEEecCCCCc
Confidence 89999999843 2344467889999998876411 11111 11 000000 0000011289999998755 556779
Q ss_pred EEEEeccCC
Q 016457 353 LCCWLSDDS 361 (389)
Q Consensus 353 v~iW~~~~~ 361 (389)
|.+|++...
T Consensus 297 v~v~d~~~~ 305 (331)
T 3u4y_A 297 LKVFTISGK 305 (331)
T ss_dssp EEEEETTSC
T ss_pred EEEEEecCC
Confidence 999999876
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=4.7e-26 Score=198.54 Aligned_cols=272 Identities=11% Similarity=0.082 Sum_probs=211.4
Q ss_pred CcceEEEeecCCCCeEEEEec-------CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLS-------TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
...+..++|+|+++++++++. ++.|.+||..+++.+..+.. ...+..++|+|++. .++++...++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~-~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQ-TLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTT-EEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCC-EEEEEecCCCEEEEEe
Confidence 567889999999998888874 56899999999988888764 34578899999983 2455556689999999
Q ss_pred ccCCeEEEEEEcCCCC---------eEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCCeeEEEEecCC
Q 016457 111 TRSFHEVWSVTAGSQE---------IFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNN 179 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 179 (389)
+.+++.+..+..+... +.+++|+|+++.+++++. ++.|.+||+.+++.+..+. .+...+.+++|+|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCCC
Confidence 9999998888875322 789999999998888873 7899999999998888876 456668999999999
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCCCccceeeec----cCCceeeEEEecCCCcEEEEEec-CCcEEEEEcCCCceeEEee
Q 016457 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVIN----VGTSVGKVGFFGETNKHLWCLTH-IETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 254 (389)
+ .+++++.++.|.+||+.++. ....... +...+..++|+ ++++.+++++. ++.|.+||+.+++.+..+.
T Consensus 197 ~-~l~~~~~~~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 197 K-RLYTTNADGELITIDTADNK----ILSRKKLLDDGKEHFFINISLD-TARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp T-EEEEECTTSEEEEEETTTTE----EEEEEECCCSSSCCCEEEEEEE-TTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred C-EEEEEcCCCeEEEEECCCCe----EEEEEEcCCCCCCcccceEEEC-CCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 6 89999999999999998652 2323222 34467789999 56666655554 5899999999998888776
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccC
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQG 334 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 334 (389)
.. ....++|+|+++.+ +++...++.|.+||..+++. +..+. . ...+.++
T Consensus 271 ~~--------------~~~~~~~s~dg~~l-~v~~~~~~~v~~~d~~~~~~------~~~~~-~-~~~~~~~-------- 319 (353)
T 3vgz_A 271 AP--------------ESLAVLFNPARNEA-YVTHRQAGKVSVIDAKSYKV------VKTFD-T-PTHPNSL-------- 319 (353)
T ss_dssp CS--------------SCCCEEEETTTTEE-EEEETTTTEEEEEETTTTEE------EEEEE-C-CSEEEEE--------
T ss_pred cC--------------CCceEEECCCCCEE-EEEECCCCeEEEEECCCCeE------EEEEe-c-CCCCCeE--------
Confidence 42 12568999999843 34555789999999988775 45554 2 3356777
Q ss_pred CCCCCCceeEEEecCC
Q 016457 335 RPAQSHGIFGWTGGED 350 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~d 350 (389)
+|+|||++|+.+..+
T Consensus 320 -~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 -ALSADGKTLYVSVKQ 334 (353)
T ss_dssp -EECTTSCEEEEEEEC
T ss_pred -EEcCCCCEEEEEEcc
Confidence 999999977776554
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=9e-27 Score=223.04 Aligned_cols=285 Identities=12% Similarity=0.086 Sum_probs=210.8
Q ss_pred CcceEEEeecCCCCeEEEEec-CC-----eEEEEeCCCceeeeeecCCC------------------------CcEEEEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLS-TN-----VVKLYSPVTGQYSGECKGHS------------------------STVNQIS 87 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~i~ 87 (389)
...|.+++|+|||++|++++. |+ .|++||+.+++....+..+. ..|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 99999999988766665443 2388999
Q ss_pred EeCCCCCCEEEEEecCCeEEEEEccCCe--EEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeec
Q 016457 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFH--EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165 (389)
Q Consensus 88 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 165 (389)
|+|++ ++|++++. +.|.+||+.++. ....+..+...+.+++|+|+++.++.++ ++.|++||+.+++...... .
T Consensus 116 ~SpDg--~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~-~ 190 (741)
T 2ecf_A 116 WSPDA--QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTA-D 190 (741)
T ss_dssp ECTTS--SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCC-C
T ss_pred ECCCC--CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEecc-C
Confidence 99999 78888876 899999998872 3445666778899999999999888776 5799999999877655443 2
Q ss_pred ccCC----------------eeEEEEecCCCCeEEEEeCCC---------------------------------cEEEEe
Q 016457 166 HVED----------------VTQVHFVPNNQNKVVSASVDG---------------------------------LICTFD 196 (389)
Q Consensus 166 ~~~~----------------v~~~~~~~~~~~~l~~~~~d~---------------------------------~i~i~d 196 (389)
+... +..++|+|+|+ .|++++.|+ .|.+||
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 3222 47899999996 888887665 788999
Q ss_pred cCC-CCCCCccceeee---ccCCceeeEEEecCCCcEEEEEec-----CCcEEEEEcCCCceeEEeecccccccCCccCC
Q 016457 197 TGG-DINDDDLLESVI---NVGTSVGKVGFFGETNKHLWCLTH-----IETLSIWDWKDGQNVASFENARSLASDSWTLD 267 (389)
Q Consensus 197 ~~~-~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 267 (389)
+.+ +. ...+. .+...+..++| | +++.|++++. +..|++||+.+++....+..... .
T Consensus 270 ~~~~~~-----~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~----~---- 334 (741)
T 2ecf_A 270 PAEQAQ-----TQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP----T---- 334 (741)
T ss_dssp SSTTCC-----CEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS----S----
T ss_pred CCCCCc-----eEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC----C----
Confidence 986 43 11111 36678899999 5 5666666553 56899999999987766654210 0
Q ss_pred CCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEE-E
Q 016457 268 DVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGW-T 346 (389)
Q Consensus 268 ~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~-s 346 (389)
....+..++|+|+|+ ++++++.||.++||.+.... . ...+. .|...|..+. .|+|+|+.|+ +
T Consensus 335 ~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~~~~~-----~-~~~l~-~~~~~v~~~~--------~~s~dg~~l~~~ 397 (741)
T 2ecf_A 335 WVPLHNSLRFLDDGS--ILWSSERTGFQHLYRIDSKG-----K-AAALT-HGNWSVDELL--------AVDEKAGLAYFR 397 (741)
T ss_dssp CCCCCSCCEECTTSC--EEEEECTTSSCEEEEECSSS-----C-EEESC-CSSSCEEEEE--------EEETTTTEEEEE
T ss_pred cCCcCCceEECCCCe--EEEEecCCCccEEEEEcCCC-----C-eeeee-ecceEEEeEe--------EEeCCCCEEEEE
Confidence 001456889999998 78888899988888776321 1 24444 5666666651 4899998764 5
Q ss_pred ecCCC--eEEEEeccC
Q 016457 347 GGEDG--RLCCWLSDD 360 (389)
Q Consensus 347 ~~~dg--~v~iW~~~~ 360 (389)
++.|+ .+++|+++.
T Consensus 398 ~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 398 AGIESARESQIYAVPL 413 (741)
T ss_dssp ECSSCTTCBEEEEEET
T ss_pred EeCCCCceEEEEEEEc
Confidence 55565 899999874
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=6.9e-27 Score=223.24 Aligned_cols=287 Identities=10% Similarity=0.063 Sum_probs=204.7
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCC---cEEEEEEeCCCCCCEEEEEecC---------CeE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSS---TVNQISFSGPSTPHVLHSCSSD---------GTI 106 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~i~~~~~~~~~~l~s~~~d---------g~i 106 (389)
..+.+++|+|||+++++ +.||.|++||+.+++....+..|.. .|.+++|+|++ ++|++++.+ +.|
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg--~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDR--EYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTS--SEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCC--CEEEEEecCccceeecceeeE
Confidence 34678999999998776 6799999999999988877777665 49999999999 789988764 788
Q ss_pred EEEEccCCeEEEEEEc---CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC--------------
Q 016457 107 RAWDTRSFHEVWSVTA---GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED-------------- 169 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------------- 169 (389)
.+||+.+++. ..+.. +...+..++|+|+++.++.++. +.|++||+.+++...... .+...
T Consensus 94 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 94 VLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHHHT
T ss_pred EEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec-CCCCCceECcccceeEEEE
Confidence 8999998876 33332 3334889999999999988876 899999999887665544 33332
Q ss_pred ----eeEEEEecCCCCeEEEEeCCC----------------------------------cEEEEecCCCCCCCccceeee
Q 016457 170 ----VTQVHFVPNNQNKVVSASVDG----------------------------------LICTFDTGGDINDDDLLESVI 211 (389)
Q Consensus 170 ----v~~~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~~~ 211 (389)
+.+++|+|+|+ .|++++.++ .|++||+.++. ....+.
T Consensus 171 ~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~----~~~~l~ 245 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT----HDLEMM 245 (723)
T ss_dssp TSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC----CCEECC
T ss_pred eccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc----eeEEee
Confidence 37899999996 888877543 79999998653 112222
Q ss_pred c------cCCceeeEEEecCCCcEEEEEecC----CcEEEEEcCCCceeEEeecccccccCCccCCCCCce----eeecc
Q 016457 212 N------VGTSVGKVGFFGETNKHLWCLTHI----ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYF----VDCHY 277 (389)
Q Consensus 212 ~------~~~~i~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~ 277 (389)
. +...+..++|+ ++++++++.... ..|++||+.+++....+... +...+ ..++|
T Consensus 246 ~~~~~~~~~~~~~~~~~S-pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-----------~~~~~~~~~~~~~~ 313 (723)
T 1xfd_A 246 PPDDPRMREYYITMVKWA-TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-----------SEAWLHRQNEEPVF 313 (723)
T ss_dssp CCCCGGGSSEEEEEEEES-SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-----------CSSCCCCCCCCCEE
T ss_pred CCccCCCccceeEEEEEe-CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-----------cCCEEeccCCCceE
Confidence 2 25678899999 778887666533 57999999998876665432 22333 37899
Q ss_pred cCCCCeEEEEEecCCc------eEEEEE-eccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC
Q 016457 278 PGEGENLWVIGGTGAG------TVGYFP-VNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED 350 (389)
Q Consensus 278 ~~~~~~~~l~~g~~dg------~i~i~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d 350 (389)
+|+|+.++++++..++ .|++|| ..++.. .....+..++......+ +|+|||++|+..+.+
T Consensus 314 spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~~~~~l~~~~~~~~~~~---------~~spdg~~l~~~~~~ 380 (723)
T 1xfd_A 314 SKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN----DNIQSITSGDWDVTKIL---------AYDEKGNKIYFLSTE 380 (723)
T ss_dssp CTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS----CCCCBSCCSSSCEEEEE---------EEETTTTEEEEEESS
T ss_pred cCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc----cceeEeecCCeEEEeee---------EEcCCCCEEEEEEcC
Confidence 9999965444466677 566677 344330 00123322232222335 899999998765544
Q ss_pred ---CeEEEEeccCC
Q 016457 351 ---GRLCCWLSDDS 361 (389)
Q Consensus 351 ---g~v~iW~~~~~ 361 (389)
+.+++|+++..
T Consensus 381 ~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 381 DLPRRRQLYSANTV 394 (723)
T ss_dssp SCTTCCEEEEECSS
T ss_pred CCCcceEEEEEeCC
Confidence 88999998743
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=1.6e-25 Score=194.26 Aligned_cols=278 Identities=13% Similarity=0.186 Sum_probs=190.3
Q ss_pred eEEEEecCCeEEEEeCC-Cc--eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC-CeEEEEEcc--CCe--EEEEEEcC
Q 016457 52 LMAVSLSTNVVKLYSPV-TG--QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD-GTIRAWDTR--SFH--EVWSVTAG 123 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~-~~--~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-g~i~iwd~~--~~~--~~~~~~~~ 123 (389)
++++++.++.|++|++. ++ +.+..+ .|...+.+++|+|++ ++|++++.+ +.|.+|++. +++ .+..+..+
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg--~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 83 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDK--RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 83 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTS--SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCC--CEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence 34444779999999985 33 333333 367789999999999 688888876 999999997 444 44556554
Q ss_pred CCCeEEEEEeCCCCeEEEeec-CCeEEEEEC---cCCceeeeeeecccCCeeEEEEecCCCCeEEEEe-CCCcEEEEecC
Q 016457 124 SQEIFCFSFGGSTDYLLAAGC-GSQIQFWDW---RNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS-VDGLICTFDTG 198 (389)
Q Consensus 124 ~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 198 (389)
..+.+++|+|++..+++++. ++.|.+||+ ...+.+..+. ....+.+++|+|+++ .+++++ .++.|.+||+.
T Consensus 84 -~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 84 -GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE--GLDGCHSANISPDNR-TLWVPALKQDRICLFTVS 159 (343)
T ss_dssp -SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC--CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEEEC
T ss_pred -CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc--CCCCceEEEECCCCC-EEEEecCCCCEEEEEEec
Confidence 48899999999998888876 889999999 4444555554 345689999999996 666666 89999999998
Q ss_pred CCCCCCccce--eee-ccCCceeeEEEecCCCcEEEEE-ecCCcEEEEEcCC--Cce--eEEeecccccccCCccCCCCC
Q 016457 199 GDINDDDLLE--SVI-NVGTSVGKVGFFGETNKHLWCL-THIETLSIWDWKD--GQN--VASFENARSLASDSWTLDDVD 270 (389)
Q Consensus 199 ~~~~~~~~~~--~~~-~~~~~i~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~--~~~--~~~~~~~~~~~~~~~~~~~~~ 270 (389)
+.... .... ... .....+..++|+ +++++++++ ..++.|.+|++.. ++. ...+..... ......
T Consensus 160 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~-pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~ 231 (343)
T 1ri6_A 160 DDGHL-VAQDPAEVTTVEGAGPRHMVFH-PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPE------NFSDTR 231 (343)
T ss_dssp TTSCE-EEEEEEEEECSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCT------TCCSCC
T ss_pred CCCce-eeecccccccCCCCCcceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCc------cccccC
Confidence 52111 1111 122 234577889999 667766554 4789999999953 332 222221110 000124
Q ss_pred ceeeecccCCCCeEEEEEecCCceEEEEEecc--CCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEec
Q 016457 271 YFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY--GGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGG 348 (389)
Q Consensus 271 ~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~--~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~ 348 (389)
.+..++|+|+++.+ ++++..++.|.+|++.. +.. +.+..+. .+.. +..+ +|+|+|++|++++
T Consensus 232 ~~~~i~~s~dg~~l-~v~~~~~~~i~v~d~~~~~~~~----~~~~~~~-~~~~-~~~~---------~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 232 WAADIHITPDGRHL-YACDRTASLITVFSVSEDGSVL----SKEGFQP-TETQ-PRGF---------NVDHSGKYLIAAG 295 (343)
T ss_dssp CEEEEEECTTSSEE-EEEETTTTEEEEEEECTTSCCE----EEEEEEE-CSSS-CCCE---------EECTTSSEEEEEC
T ss_pred CccceEECCCCCEE-EEEecCCCEEEEEEEcCCCCce----EEeeeec-CCCc-cceE---------EECCCCCEEEEec
Confidence 56689999999842 34666899999999983 222 1123333 2222 6666 9999999888877
Q ss_pred -CCCeEEEEeccC
Q 016457 349 -EDGRLCCWLSDD 360 (389)
Q Consensus 349 -~dg~v~iW~~~~ 360 (389)
.|+.|.+|+++.
T Consensus 296 ~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 296 QKSHHISVYEIVG 308 (343)
T ss_dssp TTTCEEEEEEEET
T ss_pred CCCCeEEEEEEcC
Confidence 689999997763
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=2.3e-25 Score=193.29 Aligned_cols=265 Identities=11% Similarity=0.123 Sum_probs=186.9
Q ss_pred ccCCCCeEEEEecC--c---eeeeeecCcceEEEeecCCCCeEEEEecC-CeEEEEeCC--Cce--eeeeecCCCCcEEE
Q 016457 16 SCDNVNSIKRFGLK--N---SIQTNFGDDYVFEIVPKNDWSLMAVSLST-NVVKLYSPV--TGQ--YSGECKGHSSTVNQ 85 (389)
Q Consensus 16 s~~~~~~i~~w~~~--~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~--~~~--~~~~~~~~~~~v~~ 85 (389)
+.+.++.|++|++. . .+..+.....+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+. .+..
T Consensus 10 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~ 88 (343)
T 1ri6_A 10 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTH 88 (343)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSE
T ss_pred eCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcE
Confidence 34678999999984 2 23333336788999999999999988876 999999987 554 344555444 7899
Q ss_pred EEEeCCCCCCEEEEEe-cCCeEEEEEc---cCCeEEEEEEcCCCCeEEEEEeCCCCeEEEee-cCCeEEEEECcC-Ccee
Q 016457 86 ISFSGPSTPHVLHSCS-SDGTIRAWDT---RSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRN-KKQV 159 (389)
Q Consensus 86 i~~~~~~~~~~l~s~~-~dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~~~~ 159 (389)
++|+|++ ++|++++ .++.|.+||+ ...+.+..+..+ ..+.+++|+|+++.+++++ .++.|.+||+.+ ++..
T Consensus 89 ~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 89 ISTDHQG--QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp EEECTTS--SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred EEEcCCC--CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 9999999 6676655 4889999999 444555555543 5689999999999998888 689999999987 5443
Q ss_pred e----eeeecccCCeeEEEEecCCCCeEE-EEeCCCcEEEEecCCCCCCCccceeeecc------CCceeeEEEecCCCc
Q 016457 160 A----CLEESHVEDVTQVHFVPNNQNKVV-SASVDGLICTFDTGGDINDDDLLESVINV------GTSVGKVGFFGETNK 228 (389)
Q Consensus 160 ~----~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~ 228 (389)
. .+.......+..++|+|+++ .++ ++..++.|.+||+................ ...+..++|+ ++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~-~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s-~dg~ 243 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQ-YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT-PDGR 243 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC-TTSS
T ss_pred eecccccccCCCCCcceEEECCCCC-EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC-CCCC
Confidence 2 22212345788999999996 554 55588999999996321111112122111 2345679999 6666
Q ss_pred EEE-EEecCCcEEEEEcCC--C--ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec-CCceEEEEEec
Q 016457 229 HLW-CLTHIETLSIWDWKD--G--QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT-GAGTVGYFPVN 301 (389)
Q Consensus 229 ~l~-~~~~d~~i~i~d~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-~dg~i~i~~~~ 301 (389)
+|+ +...++.|.+||+.. + +.+..+.. + ..+..++|+|+++ +|++++ .++.|.+|+++
T Consensus 244 ~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~------------~-~~~~~~~~s~dg~--~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 244 HLYACDRTASLITVFSVSEDGSVLSKEGFQPT------------E-TQPRGFNVDHSGK--YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTSCCEEEEEEEEC------------S-SSCCCEEECTTSS--EEEEECTTTCEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEcCCCCceEEeeeecC------------C-CccceEEECCCCC--EEEEecCCCCeEEEEEEc
Confidence 666 455789999999982 2 33333332 2 3378999999998 555555 68999999765
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=3.2e-26 Score=218.00 Aligned_cols=280 Identities=9% Similarity=0.064 Sum_probs=205.8
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC-----
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS----- 113 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~----- 113 (389)
..|.+++|+|| +.++.+. ++.|++||+.+++.... ..+...+.+++|+|++ +.|+++ .|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG--~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYL-FDTNEETASLDFSPVG--DRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEE-ECCTTCCTTCEECTTS--SEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEc-cCCcccccCCcCCCCC--CEEEEE-ECCeEEEEecCcccccC
Confidence 46999999999 6666664 69999999998876544 4467778999999999 688885 689999999998
Q ss_pred CeEEEEEEcCCCC--------------eEEEEEeCCCCeEEEee---------------------------------cCC
Q 016457 114 FHEVWSVTAGSQE--------------IFCFSFGGSTDYLLAAG---------------------------------CGS 146 (389)
Q Consensus 114 ~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~ 146 (389)
++.......+... +.+++|+|+++.|++++ .+.
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 7766544443332 48899999999999987 346
Q ss_pred eEEEEECcCCceeeeee-ecccCCeeEEEEecCCCCeEEEEeCCC-----cEEEEecCCCCCCCccceeee--ccCC---
Q 016457 147 QIQFWDWRNKKQVACLE-ESHVEDVTQVHFVPNNQNKVVSASVDG-----LICTFDTGGDINDDDLLESVI--NVGT--- 215 (389)
Q Consensus 147 ~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~~--~~~~--- 215 (389)
.|.+||+.+++...... ..|...+.+++|+|+++ .|++++.++ .|++||+.++. ....+. ....
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g~----~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETGR----FVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTCC----EEEEEEEEECSSCCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCCc----eeeEEEEccCCCeEC
Confidence 89999999887654432 14667799999999996 888877775 89999998652 122221 1222
Q ss_pred ceeeEEEecC--CCcEEEEEecCCcEEEEEcC-CCceeEEeecccccccCCccCCCCCceee-ecccCCCCeEEEEEecC
Q 016457 216 SVGKVGFFGE--TNKHLWCLTHIETLSIWDWK-DGQNVASFENARSLASDSWTLDDVDYFVD-CHYPGEGENLWVIGGTG 291 (389)
Q Consensus 216 ~i~~~~~~~~--~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~g~~ 291 (389)
.+..++|+ + ++++++++..++.+++|.+. ++..+..+.. +...+.. ++|+|+++.+ +++++.
T Consensus 311 ~~~~~~~s-p~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~------------~~~~v~~~~~~spdg~~l-~~~~~~ 376 (706)
T 2z3z_A 311 PLHPLTFL-PGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK------------GEWEVTNFAGFDPKGTRL-YFESTE 376 (706)
T ss_dssp CCSCCEEC-TTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC------------SSSCEEEEEEECTTSSEE-EEEESS
T ss_pred ccCCceee-cCCCCEEEEEEccCCccEEEEEECCCCEEEecCC------------CCeEEEeeeEEcCCCCEE-EEEecC
Confidence 24678999 6 78899999999999999876 5666666654 4456666 7999999853 344445
Q ss_pred Cc----eEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC----CeEEEEeccCC
Q 016457 292 AG----TVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED----GRLCCWLSDDS 361 (389)
Q Consensus 292 dg----~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d----g~v~iW~~~~~ 361 (389)
++ .|+.|++.+++. ..+ .|...+.++ +|||||++|+....+ +.|++|+++..
T Consensus 377 ~~~~~~~l~~~d~~~~~~-------~~l--~~~~~~~~~---------~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGGKT-------KDL--TPESGMHRT---------QLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp SCTTCBEEEEEETTCCCC-------EES--CCSSSEEEE---------EECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred CCCceEEEEEEEcCCCCc-------eec--cCCCceEEE---------EECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 54 666677666543 333 255667788 999999988776433 56999998765
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.6e-26 Score=194.84 Aligned_cols=256 Identities=9% Similarity=-0.029 Sum_probs=190.5
Q ss_pred EecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC-CeEEEEEEcC-CCCeEEEEEe
Q 016457 56 SLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS-FHEVWSVTAG-SQEIFCFSFG 133 (389)
Q Consensus 56 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~~v~~~~~~ 133 (389)
++.++.|++||+.+++... +..|...|.+++|+|++ ++|++++ ++.|.+||+.+ ++.......+ ...+.+++|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg--~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDG--KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTS--SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECCCC--CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 3568899999999887664 44588999999999999 6888876 78999999998 8777666555 4678999999
Q ss_pred CCCCeEEEeec--CCeEEEE--ECcCCceeeeeeecccCCeeEEEEecCCCCeEE-EEeCCCcEEEEecCCCCCCCccce
Q 016457 134 GSTDYLLAAGC--GSQIQFW--DWRNKKQVACLEESHVEDVTQVHFVPNNQNKVV-SASVDGLICTFDTGGDINDDDLLE 208 (389)
Q Consensus 134 ~~~~~l~~~~~--d~~i~iw--d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~ 208 (389)
|++..+++++. ++...+| ++.+++ ...+. +...+..++|+|+++ .|+ ++..++.+.+|++.... ....
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~~~spdg~-~l~~~~~~~~~~~l~~~~~~~---~~~~ 166 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT--KNLPSYWHGWSPDGK-SFTYCGIRDQVFDIYSMDIDS---GVET 166 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC--SSSSEEEEEECTTSS-EEEEEEEETTEEEEEEEETTT---CCEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee--cCCCccceEECCCCC-EEEEEECCCCceEEEEEECCC---Ccce
Confidence 99999999883 3445555 544444 34444 334589999999996 555 78889999999975221 2244
Q ss_pred eeeccCCceeeEEEecCCCcEEEEEe-cCCcEEEEEcC-CCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEE
Q 016457 209 SVINVGTSVGKVGFFGETNKHLWCLT-HIETLSIWDWK-DGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 209 ~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 286 (389)
.+..+...+..++|+ ++++.|+.++ .++.+.+|++. .+..+..+.. |...+..+.|+|+++ +|
T Consensus 167 ~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~~~~~~~~s~dg~--~l 231 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYS-PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD------------SAYGDWFPHPSPSGD--KV 231 (297)
T ss_dssp ECCCSSSCEEEEEEC-TTSSEEEEEECTTSSCEEEEEETTSSCEEECCC------------CSEEEEEEEECTTSS--EE
T ss_pred EcccCCCccccceEC-CCCCEEEEEecCCCCccEEEECCCCCCcEEEec------------CCcccCCeEECCCCC--EE
Confidence 555677789999999 6777766655 58899999886 4555555554 457788999999999 66
Q ss_pred EEecCC-----------ceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCC
Q 016457 287 IGGTGA-----------GTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDG 351 (389)
Q Consensus 287 ~~g~~d-----------g~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg 351 (389)
++++.+ +.|++||+.+++.. .+..+. +|...+..+ +|+|++++|++++.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~----~~~~~~-~~~~~~~~~---------~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 232 VFVSYDADVFDHPRDLDVRVQLMDMDGGNVE----TLFDLF-GGQGTMNSP---------NWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEETTCCSCCSSEEEEEEEEETTSCSCE----EEEEEE-ESTTTSCSC---------CBCTTSSEEEEEEECC
T ss_pred EEEEcCCCCCcccccCceEEEEEecCCCCce----eeeccC-CCCcccccc---------eECCCCCEEEEEEecc
Confidence 666554 67999999887641 122232 567777888 9999999998887553
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1e-25 Score=215.77 Aligned_cols=306 Identities=7% Similarity=-0.009 Sum_probs=220.6
Q ss_pred ccccCC-CC-----eEEEEecCc--eeeeeec---C----------------------cceEEEeecCCCCeEEEEecCC
Q 016457 14 SQSCDN-VN-----SIKRFGLKN--SIQTNFG---D----------------------DYVFEIVPKNDWSLMAVSLSTN 60 (389)
Q Consensus 14 ~~s~~~-~~-----~i~~w~~~~--~~~~~~~---~----------------------~~v~~~~~~~~~~~l~~~~~d~ 60 (389)
.++.+. ++ .|++|++.. ....+.. . ..|.+++|+|||++|++++. +
T Consensus 51 la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~ 129 (741)
T 2ecf_A 51 VTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-G 129 (741)
T ss_dssp EEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-T
T ss_pred EEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-C
Confidence 455555 66 899999853 3333332 1 34889999999999999985 9
Q ss_pred eEEEEeCCCce--eeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCC------------
Q 016457 61 VVKLYSPVTGQ--YSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQE------------ 126 (389)
Q Consensus 61 ~i~iw~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------ 126 (389)
.|++||+.+++ ....+..|...+..++|+|++ ++|++++ ++.|.+||+.+++.......+...
T Consensus 130 ~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG--~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~ 206 (741)
T 2ecf_A 130 ELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG--GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADE 206 (741)
T ss_dssp EEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS--SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHH
T ss_pred cEEEEECCCCCcceEEEcccCCcccccccCCCCC--CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeee
Confidence 99999999873 455667788899999999999 7888887 568999999988776554443332
Q ss_pred ----eEEEEEeCCCCeEEEeecCC---------------------------------eEEEEECcC-Cceeeeeee-ccc
Q 016457 127 ----IFCFSFGGSTDYLLAAGCGS---------------------------------QIQFWDWRN-KKQVACLEE-SHV 167 (389)
Q Consensus 127 ----v~~~~~~~~~~~l~~~~~d~---------------------------------~i~iwd~~~-~~~~~~~~~-~~~ 167 (389)
+.+++|+|+++.|++++.|+ .|.+||+.+ ++....... .|.
T Consensus 207 ~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 286 (741)
T 2ecf_A 207 EMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD 286 (741)
T ss_dssp HSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS
T ss_pred ccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc
Confidence 47899999999999987765 889999988 765543321 367
Q ss_pred CCeeEEEEecCCCCeEEEEeC-----CCcEEEEecCCCCCCCccceeeeccCC----ceeeEEEecCCCcEEEEEecCCc
Q 016457 168 EDVTQVHFVPNNQNKVVSASV-----DGLICTFDTGGDINDDDLLESVINVGT----SVGKVGFFGETNKHLWCLTHIET 238 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~l~~~~~d~~ 238 (389)
..+..++| |+|+ .|++++. +..|++||+.++. .......+.. .+..++|+ ++++++++++.++.
T Consensus 287 ~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~~~~~~~~s-pdg~~~~~~~~~g~ 359 (741)
T 2ecf_A 287 IYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASNQ----QRVLAHETSPTWVPLHNSLRFL-DDGSILWSSERTGF 359 (741)
T ss_dssp EEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTTCC----EEEEEEEECSSCCCCCSCCEEC-TTSCEEEEECTTSS
T ss_pred eEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCCCc----eEEEEEcCCCCcCCcCCceEEC-CCCeEEEEecCCCc
Confidence 78999999 9996 7776653 5679999998653 2222222222 45689999 67778899999998
Q ss_pred EEEEEcC-CCceeEEeecccccccCCccCCCCCceeee-cccCCCCeEEEEEecCCc--eEEEEEecc-CCccccCCCeE
Q 016457 239 LSIWDWK-DGQNVASFENARSLASDSWTLDDVDYFVDC-HYPGEGENLWVIGGTGAG--TVGYFPVNY-GGAATIGPPEA 313 (389)
Q Consensus 239 i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~l~~g~~dg--~i~i~~~~~-~~~~~~~~~~~ 313 (389)
++||.+. ++. ...+.. +...+..+ .|+|+++.+ +++++.++ .+++|++.. +.. ..
T Consensus 360 ~~l~~~~~~~~-~~~l~~------------~~~~v~~~~~~s~dg~~l-~~~~~~~~~~~~~l~~~~~~g~~------~~ 419 (741)
T 2ecf_A 360 QHLYRIDSKGK-AAALTH------------GNWSVDELLAVDEKAGLA-YFRAGIESARESQIYAVPLQGGQ------PQ 419 (741)
T ss_dssp CEEEEECSSSC-EEESCC------------SSSCEEEEEEEETTTTEE-EEEECSSCTTCBEEEEEETTCCC------CE
T ss_pred cEEEEEcCCCC-eeeeee------------cceEEEeEeEEeCCCCEE-EEEEeCCCCceEEEEEEEcCCCC------ee
Confidence 8888765 344 555554 44667776 599999843 34555665 899999874 332 24
Q ss_pred EEecccceeeeeccCCCcccCCCCCCCceeEEEecCC----CeEEEEeccCC
Q 016457 314 VLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED----GRLCCWLSDDS 361 (389)
Q Consensus 314 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d----g~v~iW~~~~~ 361 (389)
.+. . ...+..+ +|||||++|+....+ +.+.+|+.+..
T Consensus 420 ~l~-~-~~~~~~~---------~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 420 RLS-K-APGMHSA---------SFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp ECC-C-SCSEEEE---------EECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred ecc-c-CCCceEE---------EECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 443 2 4556777 999999988776433 46888887543
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=9.2e-26 Score=195.30 Aligned_cols=268 Identities=10% Similarity=0.066 Sum_probs=197.7
Q ss_pred CeEEEEecCCeEEEEeCCCceeeeeecCCCC--cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCC----
Q 016457 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSS--TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGS---- 124 (389)
Q Consensus 51 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---- 124 (389)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|++. .+++++..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGR-IAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSS-EEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCC-EEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 4788999999999999999998887763322 478999999983 244566678899999999999888777531
Q ss_pred -CCeEEEEEeCCCCeEEEee------------cCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCc
Q 016457 125 -QEIFCFSFGGSTDYLLAAG------------CGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGL 191 (389)
Q Consensus 125 -~~v~~~~~~~~~~~l~~~~------------~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 191 (389)
..+.+++|+|+++.++++. .++.|.+||+.+++.+..+. ....+.+++|+|+++ .++++ ++.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~-~l~~~--~~~ 155 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--APRQITMLAWARDGS-KLYGL--GRD 155 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE--CCSSCCCEEECTTSS-CEEEE--SSS
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe--CCCCcceeEECCCCC-EEEEe--CCe
Confidence 2577899999999988886 57999999999988887776 355688999999996 67776 688
Q ss_pred EEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-C-----------------------cEEEEEcCCC
Q 016457 192 ICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-E-----------------------TLSIWDWKDG 247 (389)
Q Consensus 192 i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-~-----------------------~i~i~d~~~~ 247 (389)
|.+||+.++. ....+.... ....+.|+ +++..++..+.. + .|.+||+.++
T Consensus 156 i~~~d~~~~~----~~~~~~~~~-~~~~~~~s-~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 229 (337)
T 1pby_B 156 LHVMDPEAGT----LVEDKPIQS-WEAETYAQ-PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp EEEEETTTTE----EEEEECSTT-TTTTTBCC-CBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred EEEEECCCCc----Eeeeeeccc-cCCCceeC-CCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC
Confidence 9999998542 222222221 11233566 455544433322 2 4789999988
Q ss_pred ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeecc
Q 016457 248 QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVL 327 (389)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 327 (389)
+.. .+.... +...+..++|+|+++ +++++ ++.|++||+.+++. +..+. ....+.++
T Consensus 230 ~~~-~~~~~~----------~~~~~~~~~~s~dg~--~l~~~--~~~v~~~d~~~~~~------~~~~~--~~~~~~~~- 285 (337)
T 1pby_B 230 EMA-MREVRI----------MDVFYFSTAVNPAKT--RAFGA--YNVLESFDLEKNAS------IKRVP--LPHSYYSV- 285 (337)
T ss_dssp CEE-EEEEEE----------CSSCEEEEEECTTSS--EEEEE--ESEEEEEETTTTEE------EEEEE--CSSCCCEE-
T ss_pred Cce-EeecCC----------CCCceeeEEECCCCC--EEEEe--CCeEEEEECCCCcC------cceec--CCCceeeE-
Confidence 765 332211 446678899999999 55666 78999999988765 44443 22345667
Q ss_pred CCCcccCCCCCCCceeEEEecCCCeEEEEeccCCc
Q 016457 328 PMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 328 ~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~ 362 (389)
+|+|+|++|++++.|+.|++|++....
T Consensus 286 --------~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 286 --------NVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp --------EECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred --------EECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 999999999999999999999998763
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.7e-24 Score=187.01 Aligned_cols=277 Identities=10% Similarity=0.075 Sum_probs=197.2
Q ss_pred ccccCCCCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEec-CCeEEEEeCCCcee-eeeecCCCCcEEEEEE
Q 016457 14 SQSCDNVNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSLS-TNVVKLYSPVTGQY-SGECKGHSSTVNQISF 88 (389)
Q Consensus 14 ~~s~~~~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~~~~~~v~~i~~ 88 (389)
-.+.+.++.|.+||.. +....+.. ...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..+++|
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE
Confidence 3467788999999975 34444444 5556 9999999997776665 88999999999887 7777767666666999
Q ss_pred eCCCCCCEEEEEecCC---eEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec-CCe-EEEEECcCCceee---
Q 016457 89 SGPSTPHVLHSCSSDG---TIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQ-IQFWDWRNKKQVA--- 160 (389)
Q Consensus 89 ~~~~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~-i~iwd~~~~~~~~--- 160 (389)
+|++ ++++++..++ .|.+||+.+++.+..+..+ ....+++|+|+++++++++. ++. |.+|++.....+.
T Consensus 92 s~dg--~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 92 TPDD--QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp CTTS--SEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred CCCC--CEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 9999 6888655553 8999999999998888764 56799999999988777765 577 9999987543321
Q ss_pred -eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe-cCCc
Q 016457 161 -CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT-HIET 238 (389)
Q Consensus 161 -~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~ 238 (389)
... ........++|+|+++.+++++..++.|.+||+.++.. ...+..+ .....+..++|+ +++++++++. .++.
T Consensus 169 ~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~-~~~~~~~~~~~s-pdg~~l~v~~~~~~~ 244 (331)
T 3u4y_A 169 QEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN-ITLLNAV-GTNNLPGTIVVS-RDGSTVYVLTESTVD 244 (331)
T ss_dssp EEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-CEEEEEE-ECSSCCCCEEEC-TTSSEEEEECSSEEE
T ss_pred Cccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-cceeeec-cCCCCCceEEEC-CCCCEEEEEEcCCCE
Confidence 111 34556899999999963445555689999999986531 0113333 345677899999 6777666554 5778
Q ss_pred EEEEEcCCCce--eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 239 LSIWDWKDGQN--VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 239 i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
|.+||+.+++. +..+...-.... ........++|+|+++.+ ++++..++.|.+||+....
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l-~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDP-----RPLFGANQMALNKTETKL-FISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCC-----GGGTTCCCEEECTTSSEE-EEEETTTTEEEEEETTSCE
T ss_pred EEEEECCCCceeeecccccccccCC-----CCcccccceEECCCCCEE-EEecCCCCcEEEEEecCCc
Confidence 99999998876 433332100000 011222558999999843 3455667899999998644
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.7e-25 Score=188.53 Aligned_cols=254 Identities=8% Similarity=-0.013 Sum_probs=186.9
Q ss_pred ccCCCCeEEEEecCc-eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCC-ceeeeeecCC-CCcEEEEEEeCC
Q 016457 16 SCDNVNSIKRFGLKN-SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT-GQYSGECKGH-SSTVNQISFSGP 91 (389)
Q Consensus 16 s~~~~~~i~~w~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~-~~~v~~i~~~~~ 91 (389)
+.+.++.|++|++.. ....+.. ...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 456789999999863 3334444 88899999999999999987 88999999998 8777666665 478899999999
Q ss_pred CCCCEEEEEe--cCCeEEEEEc--cCCeEEEEEEcCCCCeEEEEEeCCCCeEE-EeecCCeEEEEECcC-Cceeeeeeec
Q 016457 92 STPHVLHSCS--SDGTIRAWDT--RSFHEVWSVTAGSQEIFCFSFGGSTDYLL-AAGCGSQIQFWDWRN-KKQVACLEES 165 (389)
Q Consensus 92 ~~~~~l~s~~--~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~-~~~~~~~~~~ 165 (389)
+ ++|++++ .++...||.+ .+++ ...+..+ ..+.+++|+|++..++ ++..++.+.+|+++. ......+. .
T Consensus 96 g--~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~ 170 (297)
T 2ojh_A 96 G--ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-H 170 (297)
T ss_dssp S--SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-C
T ss_pred C--CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-c
Confidence 9 7899888 3345555554 4444 3344443 4589999999999888 556689999998643 23334444 5
Q ss_pred ccCCeeEEEEecCCCCeEEEEe-CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC--------
Q 016457 166 HVEDVTQVHFVPNNQNKVVSAS-VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-------- 236 (389)
Q Consensus 166 ~~~~v~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------- 236 (389)
+...+.+++|+|+++ .|+.++ .++.+.+|++... ......+..+...+..++|+ +++++|++++.+
T Consensus 171 ~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~s-~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWRVRVD---GSSVERITDSAYGDWFPHPS-PSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp SSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETT---SSCEEECCCCSEEEEEEEEC-TTSSEEEEEEEETTCCSCCS
T ss_pred CCCccccceECCCCC-EEEEEecCCCCccEEEECCC---CCCcEEEecCCcccCCeEEC-CCCCEEEEEEcCCCCCcccc
Confidence 778899999999996 666555 5899999998622 12345555667788899999 778888877765
Q ss_pred ---CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCC
Q 016457 237 ---ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGA 292 (389)
Q Consensus 237 ---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~d 292 (389)
+.|.+||+.+++......... |...+..++|+|+++ +|++++.+
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg~--~l~~~~~~ 292 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFG----------GQGTMNSPNWSPDGD--EFAYVRYF 292 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEE----------STTTSCSCCBCTTSS--EEEEEEEC
T ss_pred cCceEEEEEecCCCCceeeeccCC----------CCcccccceECCCCC--EEEEEEec
Confidence 569999998876543332111 557899999999999 55555443
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=8.9e-25 Score=216.19 Aligned_cols=297 Identities=12% Similarity=0.075 Sum_probs=210.7
Q ss_pred CCeEEEEecC-ceeeeeec-CcceEEEeecCCCCeEEEEecC------CeEEEEeCCCceeeeeecCCCCcE-------E
Q 016457 20 VNSIKRFGLK-NSIQTNFG-DDYVFEIVPKNDWSLMAVSLST------NVVKLYSPVTGQYSGECKGHSSTV-------N 84 (389)
Q Consensus 20 ~~~i~~w~~~-~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v-------~ 84 (389)
.+.|++|++. .....+.. ...+.+++|+|||+.||+++.+ ..|++|++.+++ ...+..|...+ .
T Consensus 32 ~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~ 110 (1045)
T 1k32_A 32 CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTD 110 (1045)
T ss_dssp TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSE
T ss_pred CCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccc
Confidence 3689999985 34555555 7889999999999999988653 379999998876 56677788888 9
Q ss_pred EEEEeCCCCCCEEEEEecC------CeEEEEEccCCeEE-----------------------------------------
Q 016457 85 QISFSGPSTPHVLHSCSSD------GTIRAWDTRSFHEV----------------------------------------- 117 (389)
Q Consensus 85 ~i~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~----------------------------------------- 117 (389)
.++|+|++ +++++++.+ ..|.+|++.+++..
T Consensus 111 ~~~~SpDg--~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw 188 (1045)
T 1k32_A 111 VAGFDPDG--NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIW 188 (1045)
T ss_dssp EEEECTTC--CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEE
T ss_pred cccCCCCC--EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEE
Confidence 99999999 677777754 35777887655432
Q ss_pred --------EEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcC-Cceeeeeeecc----------------------
Q 016457 118 --------WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRN-KKQVACLEESH---------------------- 166 (389)
Q Consensus 118 --------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~---------------------- 166 (389)
..+..|...+.++.|+++ ..++++..++.+.+|.+.. +.....+. .|
T Consensus 189 ~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~~~~~SpDG~~la~~~~~~ 266 (1045)
T 1k32_A 189 IEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT-SFTDYYPRHLNTDGRRILFSKGGS 266 (1045)
T ss_dssp EEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC-CCCSSCEEEEEESSSCEEEEETTE
T ss_pred EECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec-CCCCcceeeEcCCCCEEEEEeCCE
Confidence 122345666777788755 3444455577777776542 22222221 11
Q ss_pred ----------------------------cCCeeEEEEe-cCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCC-c
Q 016457 167 ----------------------------VEDVTQVHFV-PNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGT-S 216 (389)
Q Consensus 167 ----------------------------~~~v~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~ 216 (389)
...+.+++|+ |+|+ .|++++ ++.|.+|++.++. ...+..+.. .
T Consensus 267 i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~~~-----~~~~~~~~~~~ 339 (1045)
T 1k32_A 267 IYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSGTY-----VLKVPEPLRIR 339 (1045)
T ss_dssp EEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTSSB-----EEECSCCSCEE
T ss_pred EEEecCCceEeeeeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCCCc-----eEEccCCCcce
Confidence 1235666666 6664 555554 5666666665321 222334455 6
Q ss_pred eeeEEEecCCCcEEEEEecCCcEE-EEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceE
Q 016457 217 VGKVGFFGETNKHLWCLTHIETLS-IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTV 295 (389)
Q Consensus 217 i~~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i 295 (389)
+..++|+ +++.|+.++.++.+. +|++.+++.. .+.. |...+..++|+|+|+ +|++++.++.|
T Consensus 340 ~~~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~------------~~~~~~~~~~SpDG~--~la~~~~~~~v 402 (1045)
T 1k32_A 340 YVRRGGD--TKVAFIHGTREGDFLGIYDYRTGKAE-KFEE------------NLGNVFAMGVDRNGK--FAVVANDRFEI 402 (1045)
T ss_dssp EEEECSS--SEEEEEEEETTEEEEEEEETTTCCEE-ECCC------------CCCSEEEEEECTTSS--EEEEEETTSEE
T ss_pred EEeeeEc--CCCeEEEEECCCceEEEEECCCCCce-EecC------------CccceeeeEECCCCC--EEEEECCCCeE
Confidence 7788887 677888888888888 9998876543 3333 557889999999999 88899999999
Q ss_pred EEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCC----------eEEEEeccCC
Q 016457 296 GYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDG----------RLCCWLSDDS 361 (389)
Q Consensus 296 ~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg----------~v~iW~~~~~ 361 (389)
++||+.+++. ..+..+|...+..+ +|||||++|++++.++ .|++|++...
T Consensus 403 ~~~d~~tg~~-------~~~~~~~~~~v~~~---------~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 403 MTVDLETGKP-------TVIERSREAMITDF---------TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEEETTTCCE-------EEEEECSSSCCCCE---------EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred EEEECCCCce-------EEeccCCCCCccce---------EECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 9999998875 34434788888888 9999999999887654 9999999865
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=4.4e-24 Score=184.72 Aligned_cols=263 Identities=10% Similarity=0.030 Sum_probs=198.8
Q ss_pred cccCCCCeEEEEecCc--eeeeeecCc---ceEEEeecCCCCeEE-EEecCCeEEEEeCCCceeeeeecC-C----CCcE
Q 016457 15 QSCDNVNSIKRFGLKN--SIQTNFGDD---YVFEIVPKNDWSLMA-VSLSTNVVKLYSPVTGQYSGECKG-H----SSTV 83 (389)
Q Consensus 15 ~s~~~~~~i~~w~~~~--~~~~~~~~~---~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~-~----~~~v 83 (389)
.+++.++.|++||... .+..+.... .+..++|+|+++.++ ++..++.|.+||+.+++.+..+.. + ...+
T Consensus 5 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 4567889999999863 444454433 589999999997665 445578999999999988776653 2 2267
Q ss_pred EEEEEeCCCCCCEEEEEe------------cCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEE
Q 016457 84 NQISFSGPSTPHVLHSCS------------SDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFW 151 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 151 (389)
..++|+|++ ++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+++.++++ ++.|.+|
T Consensus 85 ~~~~~s~dg--~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 85 FGAALSPDG--KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp TCEEECTTS--SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cceEECCCC--CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 789999999 6888875 579999999999998888876 4678889999999988888 6899999
Q ss_pred ECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC-----------------------cEEEEecCCCCCCCccce
Q 016457 152 DWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG-----------------------LICTFDTGGDINDDDLLE 208 (389)
Q Consensus 152 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-----------------------~i~i~d~~~~~~~~~~~~ 208 (389)
|+.+++.+..+. .+. ....+.|+|++..+++++..++ .|.+||+.++.. ...
T Consensus 160 d~~~~~~~~~~~-~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~ 234 (337)
T 1pby_B 160 DPEAGTLVEDKP-IQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM---AMR 234 (337)
T ss_dssp ETTTTEEEEEEC-STT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE---EEE
T ss_pred ECCCCcEeeeee-ccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc---eEe
Confidence 999998877776 222 1113378899863333333333 468999986531 123
Q ss_pred eeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEE
Q 016457 209 SVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIG 288 (389)
Q Consensus 209 ~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 288 (389)
....+...+..++|+ +++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|+++ +|++
T Consensus 235 ~~~~~~~~~~~~~~s-~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~--~l~~ 296 (337)
T 1pby_B 235 EVRIMDVFYFSTAVN-PAKTRAFGA--YNVLESFDLEKNASIKRVPLP-------------HSYYSVNVSTDGS--TVWL 296 (337)
T ss_dssp EEEECSSCEEEEEEC-TTSSEEEEE--ESEEEEEETTTTEEEEEEECS-------------SCCCEEEECTTSC--EEEE
T ss_pred ecCCCCCceeeEEEC-CCCCEEEEe--CCeEEEEECCCCcCcceecCC-------------CceeeEEECCCCC--EEEE
Confidence 334455678889999 678888877 789999999999888776632 4578899999999 6666
Q ss_pred ecCCceEEEEEeccCCc
Q 016457 289 GTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 289 g~~dg~i~i~~~~~~~~ 305 (389)
++.++.|++||+.+++.
T Consensus 297 ~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 297 GGALGDLAAYDAETLEK 313 (337)
T ss_dssp ESBSSEEEEEETTTCCE
T ss_pred EcCCCcEEEEECcCCcE
Confidence 77899999999998776
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=2.8e-24 Score=205.22 Aligned_cols=293 Identities=9% Similarity=0.024 Sum_probs=200.3
Q ss_pred CCCCeEEEEecC--ceeeeeec-Cc---ceEEEeecCCCCeEEEEecC---------CeEEEEeCCCcee--eeeecCCC
Q 016457 18 DNVNSIKRFGLK--NSIQTNFG-DD---YVFEIVPKNDWSLMAVSLST---------NVVKLYSPVTGQY--SGECKGHS 80 (389)
Q Consensus 18 ~~~~~i~~w~~~--~~~~~~~~-~~---~v~~~~~~~~~~~l~~~~~d---------~~i~iw~~~~~~~--~~~~~~~~ 80 (389)
+.|++|++|+.. +....+.+ .. .|.+++|+|||++|++++.+ +.|.+||+.+++. +....+|.
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 113 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc
Confidence 678999999985 34444444 22 49999999999999999864 7889999998875 22233455
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCe------------------EEEEEeCCCCeEEEe
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEI------------------FCFSFGGSTDYLLAA 142 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~ 142 (389)
..+..++|+|++ +.|++++. +.|++||+.+++.......+...+ .+++|+|+++.|+++
T Consensus 114 ~~~~~~~~SPdG--~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 114 AKLQYAGWGPKG--QQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CCCSBCCBCSST--TCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred ccccccEECCCC--CEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 568999999999 68888875 789999999888776665543333 789999999999988
Q ss_pred ecCC----------------------------------eEEEEECcCCceeeeeeecc------cCCeeEEEEecCCCCe
Q 016457 143 GCGS----------------------------------QIQFWDWRNKKQVACLEESH------VEDVTQVHFVPNNQNK 182 (389)
Q Consensus 143 ~~d~----------------------------------~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~ 182 (389)
+.++ .|++||+.+++....+. .+ ...+..++|+|+|+ +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~~~~~~~~SpDg~-~ 268 (723)
T 1xfd_A 191 AINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMM-PPDDPRMREYYITMVKWATSTK-V 268 (723)
T ss_dssp EEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECC-CCCCGGGSSEEEEEEEESSSSE-E
T ss_pred EECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEee-CCccCCCccceeEEEEEeCCCe-E
Confidence 7543 79999999887655555 32 56789999999996 7
Q ss_pred EEEEeC----CCcEEEEecCCCCCCCccceeee-ccCCce----eeEEEecCCCcEEEE--EecCC------cEEEEE-c
Q 016457 183 VVSASV----DGLICTFDTGGDINDDDLLESVI-NVGTSV----GKVGFFGETNKHLWC--LTHIE------TLSIWD-W 244 (389)
Q Consensus 183 l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i----~~~~~~~~~~~~l~~--~~~d~------~i~i~d-~ 244 (389)
+++... +..|++||+.++. ...... .+...+ ..++|+ ++++.|+. +..++ .|.+|| .
T Consensus 269 l~~~~~~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~~~~l~~~d~~ 343 (723)
T 1xfd_A 269 AVTWLNRAQNVSILTLCDATTGV----CTKKHEDESEAWLHRQNEEPVFS-KDGRKFFFIRAIPQGGRGKFYHITVSSSQ 343 (723)
T ss_dssp EEEEEETTSCEEEEEEEETTTCC----EEEEEEEECSSCCCCCCCCCEEC-TTSCSEEEEEEECCSSSSCEEEEEEECSS
T ss_pred EEEEEcCCCCeEEEEEEeCCCCc----ceEEEEeccCCEEeccCCCceEc-CCCCeEEEEEecccCCCcceeEEEEEecc
Confidence 766643 3579999998653 222222 223333 378999 56665553 45566 567777 3
Q ss_pred CCCce--eEEeecccccccCCccCCCCCceee-ecccCCCCeEEEE-EecCC--ceEEEEEeccCCccccCCCeEEEecc
Q 016457 245 KDGQN--VASFENARSLASDSWTLDDVDYFVD-CHYPGEGENLWVI-GGTGA--GTVGYFPVNYGGAATIGPPEAVLVGG 318 (389)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~-~g~~d--g~i~i~~~~~~~~~~~~~~~~~~~~~ 318 (389)
..+.. ...+.. +...+.. ++|+|+|+ .|+ ++..+ +.+++|++..... .....+...
T Consensus 344 ~~~~~~~~~~l~~------------~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~~~~~~----~~~~~l~~~ 405 (723)
T 1xfd_A 344 PNSSNDNIQSITS------------GDWDVTKILAYDEKGN--KIYFLSTEDLPRRRQLYSANTVGN----FNRQCLSCD 405 (723)
T ss_dssp CCSSSCCCCBSCC------------SSSCEEEEEEEETTTT--EEEEEESSSCTTCCEEEEECSSTT----CCCBCSSTT
T ss_pred CCCCccceeEeec------------CCeEEEeeeEEcCCCC--EEEEEEcCCCCcceEEEEEeCCCC----CCcceeccc
Confidence 33331 333332 1133444 68999999 444 44444 7899999875321 001222211
Q ss_pred --cceeeeeccCCCcccCCCCCCCceeEEEe
Q 016457 319 --HTAVVRSVLPMPSVQGRPAQSHGIFGWTG 347 (389)
Q Consensus 319 --h~~~v~~~~~~~~~~~~~~s~~~~~l~s~ 347 (389)
|...+..+ +|+|||++|+..
T Consensus 406 ~~~~~~~~~~---------~~spdg~~l~~~ 427 (723)
T 1xfd_A 406 LVENCTYFSA---------SFSHSMDFFLLK 427 (723)
T ss_dssp SSSSCCCCEE---------EECTTSSEEEEE
T ss_pred ccCCCCeEEE---------EECCCCCEEEEE
Confidence 55567777 899999987764
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=1.6e-24 Score=201.64 Aligned_cols=269 Identities=11% Similarity=-0.015 Sum_probs=199.9
Q ss_pred CcceEEEeecCCCCeEEEEec-CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEec---CCeEEEEEccC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLS-TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS---DGTIRAWDTRS 113 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~---dg~i~iwd~~~ 113 (389)
..+|++++|+|||+.||+++. +|+++||++.+++.......+...+..++|+|+ +++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd---~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG---RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS---EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC---eEEEEeccCCCCcceEEEEEec
Confidence 567999999999999999887 999999999776655444434368999999987 37777765 45566665543
Q ss_pred ---CeEEEEEEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC
Q 016457 114 ---FHEVWSVTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189 (389)
Q Consensus 114 ---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 189 (389)
+... .+.. ...+...+|+|+++. +++++.++.+.+||+.+++...... +.. .+++|+|+|+ .|++++.+
T Consensus 98 ~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~--~~~--~~~~~spDG~-~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR--LPG--FGFVSDIRGD-LIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE--ESS--CEEEEEEETT-EEEEEEEE
T ss_pred cCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec--CCC--ceEEECCCCC-EEEEEEEc
Confidence 2222 3332 234556788888765 4455555666699999887655443 333 8899999996 88877776
Q ss_pred ----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCC--cEEEEEcCCCceeEEeecccccccCC
Q 016457 190 ----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE--TLSIWDWKDGQNVASFENARSLASDS 263 (389)
Q Consensus 190 ----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~ 263 (389)
+.|++||+.++. ...+..+...+..++|+ |+++.|+++..++ .|++||+.+++.. .+..
T Consensus 171 ~~~~~~i~~~d~~~g~-----~~~l~~~~~~~~~~~~S-pDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~-------- 235 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGG-----LRVFDSGEGSFSSASIS-PGMKVTAGLETAREARLVTVDPRDGSVE-DLEL-------- 235 (582)
T ss_dssp ETTEEEEEEEETTTCC-----CEEECCSSCEEEEEEEC-TTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC--------
T ss_pred CCCCeEEEEEcCCCCC-----ceEeecCCCccccceEC-CCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC--------
Confidence 789999998653 44566777889999999 7888999888888 8999999988776 5544
Q ss_pred ccCCCCCceeeec--------ccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCC
Q 016457 264 WTLDDVDYFVDCH--------YPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGR 335 (389)
Q Consensus 264 ~~~~~~~~i~~~~--------~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 335 (389)
|...+..+. |+|||. ++++++.+|.+++|++ ++. +. .+...|.++
T Consensus 236 ----~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~g~~~l~~~--g~~------~~----~~~~~v~~~--------- 288 (582)
T 3o4h_A 236 ----PSKDFSSYRPTAITWLGYLPDGR--LAVVARREGRSAVFID--GER------VE----APQGNHGRV--------- 288 (582)
T ss_dssp ----SCSHHHHHCCSEEEEEEECTTSC--EEEEEEETTEEEEEET--TEE------EC----CCSSEEEEE---------
T ss_pred ----CCcChhhhhhccccceeEcCCCc--EEEEEEcCCcEEEEEE--CCe------ec----cCCCceEEE---------
Confidence 446677777 999995 7889999999999999 443 11 233567788
Q ss_pred CCCCCceeEEEecCCCe---EEEEecc
Q 016457 336 PAQSHGIFGWTGGEDGR---LCCWLSD 359 (389)
Q Consensus 336 ~~s~~~~~l~s~~~dg~---v~iW~~~ 359 (389)
+|+ +++++++++.+.. |.+|+.+
T Consensus 289 ~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 289 VLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred Eec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 899 9999999887754 6666654
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2.1e-24 Score=213.58 Aligned_cols=290 Identities=8% Similarity=-0.028 Sum_probs=223.4
Q ss_pred eEEEEe--cCceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCC-ceeeeeecCCCCcEEEEEEeCCCCCCEE
Q 016457 22 SIKRFG--LKNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT-GQYSGECKGHSSTVNQISFSGPSTPHVL 97 (389)
Q Consensus 22 ~i~~w~--~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~i~~~~~~~~~~l 97 (389)
..++|. .......+.+ ...+.++.|+++ .+++++..++.+.||.+.. +.....+..|. .+..++|+|++ +.|
T Consensus 184 ~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG--~~l 259 (1045)
T 1k32_A 184 RGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDG--RRI 259 (1045)
T ss_dssp CCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESS--SCE
T ss_pred cCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCC--CEE
Confidence 344443 3344455555 888999999998 6777788889999998653 44455555554 46778999999 678
Q ss_pred EEEecCCeEEEEEccCCeEEEEEEc-----------CCCCeEEEEEe-CCCCeEEEeecCCeEEEEECcCCceeeeeeec
Q 016457 98 HSCSSDGTIRAWDTRSFHEVWSVTA-----------GSQEIFCFSFG-GSTDYLLAAGCGSQIQFWDWRNKKQVACLEES 165 (389)
Q Consensus 98 ~s~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 165 (389)
+++ .++.|.+|++... .+..+.. |...+.+++|+ |++..+++++ ++.|.+|++..++... +. .
T Consensus 260 a~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~-~ 334 (1045)
T 1k32_A 260 LFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP-E 334 (1045)
T ss_dssp EEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS-C
T ss_pred EEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc-C
Confidence 777 5899999999544 3334444 22368999999 9999888887 7899999998776544 44 4
Q ss_pred ccC-CeeEEEEecCCCCeEEEEeCCCcEE-EEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEE
Q 016457 166 HVE-DVTQVHFVPNNQNKVVSASVDGLIC-TFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWD 243 (389)
Q Consensus 166 ~~~-~v~~~~~~~~~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d 243 (389)
|.. .+..++|+ +++ .|+.++.++.+. +||+.++. ...+..+...+..++|+ +++++|++++.++.|++||
T Consensus 335 ~~~~~~~~~~~s-dg~-~l~~~s~~~~l~~~~d~~~~~-----~~~l~~~~~~~~~~~~S-pDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 335 PLRIRYVRRGGD-TKV-AFIHGTREGDFLGIYDYRTGK-----AEKFEENLGNVFAMGVD-RNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp CSCEEEEEECSS-SEE-EEEEEETTEEEEEEEETTTCC-----EEECCCCCCSEEEEEEC-TTSSEEEEEETTSEEEEEE
T ss_pred CCcceEEeeeEc-CCC-eEEEEECCCceEEEEECCCCC-----ceEecCCccceeeeEEC-CCCCEEEEECCCCeEEEEE
Confidence 666 89999999 885 888888888888 89988542 23333666789999999 7899999999999999999
Q ss_pred cCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCC----------ceEEEEEeccCCccccCCCeE
Q 016457 244 WKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGA----------GTVGYFPVNYGGAATIGPPEA 313 (389)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~d----------g~i~i~~~~~~~~~~~~~~~~ 313 (389)
+.+++....+.. |...+..++|+|||+ +|++++.+ +.|++||+.+++. .
T Consensus 407 ~~tg~~~~~~~~------------~~~~v~~~~~SpDG~--~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~-------~ 465 (1045)
T 1k32_A 407 LETGKPTVIERS------------REAMITDFTISDNSR--FIAYGFPLKHGETDGYVMQAIHVYDMEGRKI-------F 465 (1045)
T ss_dssp TTTCCEEEEEEC------------SSSCCCCEEECTTSC--EEEEEEEECSSTTCSCCEEEEEEEETTTTEE-------E
T ss_pred CCCCceEEeccC------------CCCCccceEECCCCC--eEEEEecCccccccCCCCCeEEEEECCCCcE-------E
Confidence 999987776655 557889999999999 66666553 4999999987654 4
Q ss_pred EEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 314 VLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 314 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
.+. .|...+..+ +|+|||++|++++.++..++|+..
T Consensus 466 ~l~-~~~~~~~~~---------~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 466 AAT-TENSHDYAP---------AFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp ECS-CSSSBEEEE---------EECTTSCEEEEEESCCCCCEECSS
T ss_pred Eee-CCCcccCCc---------eEcCCCCEEEEEecccCCcCcchh
Confidence 444 677777777 999999999999998888888764
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=5.9e-23 Score=178.57 Aligned_cols=268 Identities=8% Similarity=0.055 Sum_probs=179.6
Q ss_pred CCCeEEEEecCc---eeee---eecCcceEEEeecCCCCeEEEEec---CCeEEEEeCCCce--eeeeecCCCCcEEEEE
Q 016457 19 NVNSIKRFGLKN---SIQT---NFGDDYVFEIVPKNDWSLMAVSLS---TNVVKLYSPVTGQ--YSGECKGHSSTVNQIS 87 (389)
Q Consensus 19 ~~~~i~~w~~~~---~~~~---~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~ 87 (389)
.++.|.+|.+.. .+.. ......+..++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 456777877642 2222 22256678899999998 555554 5899999997765 4445455777889999
Q ss_pred EeCCCCCCEEEEEe-cCCeEEEEEcc-CC--eEEEEEEcC---------CCCeEEEEEeCCCCeEEEeec-CCeEEEEEC
Q 016457 88 FSGPSTPHVLHSCS-SDGTIRAWDTR-SF--HEVWSVTAG---------SQEIFCFSFGGSTDYLLAAGC-GSQIQFWDW 153 (389)
Q Consensus 88 ~~~~~~~~~l~s~~-~dg~i~iwd~~-~~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~ 153 (389)
|+|++ ++|++++ .++.|.+|++. ++ +.+..+... ...+.+++|+|+++ ++++.. ++.|.+||+
T Consensus 93 ~spdg--~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 93 VDEAR--QLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EETTT--TEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEE
T ss_pred ECCCC--CEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEE
Confidence 99999 6788777 78999999996 22 334444322 12488999999998 555554 889999999
Q ss_pred c-CCcee--eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccC------CceeeEEEec
Q 016457 154 R-NKKQV--ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVG------TSVGKVGFFG 224 (389)
Q Consensus 154 ~-~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~------~~i~~~~~~~ 224 (389)
. +++.. ..+.......+..++|+|+++.++++...++.|.+|++................. ..+..++|+
T Consensus 170 ~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s- 248 (347)
T 3hfq_A 170 SDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS- 248 (347)
T ss_dssp CTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC-
T ss_pred CCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC-
Confidence 8 45432 2222123346788999999963444456788999999884211111122222222 357889999
Q ss_pred CCCcEE-EEEecCCcEEEEEcCCC---ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec-CCceEEEEE
Q 016457 225 ETNKHL-WCLTHIETLSIWDWKDG---QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT-GAGTVGYFP 299 (389)
Q Consensus 225 ~~~~~l-~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-~dg~i~i~~ 299 (389)
+++++| ++...++.|.+|++... +.+..+.. +...+..++|+|+|+ +|++++ .++.|.+|+
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~~spdg~--~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST------------EGDFPRDFDLDPTEA--FVVVVNQNTDNATLYA 314 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC------------SSSCCCEEEECTTSS--EEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec------------CCCCcCeEEECCCCC--EEEEEEcCCCcEEEEE
Confidence 677766 55566899999998732 33333332 335678999999998 555554 458999995
Q ss_pred ec--cCCc
Q 016457 300 VN--YGGA 305 (389)
Q Consensus 300 ~~--~~~~ 305 (389)
++ ++++
T Consensus 315 ~d~~tg~l 322 (347)
T 3hfq_A 315 RDLTSGKL 322 (347)
T ss_dssp ECTTTCCE
T ss_pred EeCCCCeE
Confidence 54 4543
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=2.2e-22 Score=175.29 Aligned_cols=244 Identities=12% Similarity=0.085 Sum_probs=187.9
Q ss_pred CCeEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCCCC---------cEEEEE
Q 016457 20 VNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGHSS---------TVNQIS 87 (389)
Q Consensus 20 ~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~---------~v~~i~ 87 (389)
++.|.+||.. +.+..+.....+..++|+|++++++++ ..++.|.+||..+++.+..+..+.. .+.+++
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 6789999985 344555445568899999999866555 4479999999999998887765432 278999
Q ss_pred EeCCCCCCEEEEEe--cCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee-
Q 016457 88 FSGPSTPHVLHSCS--SDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE- 164 (389)
Q Consensus 88 ~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~- 164 (389)
|+|++ +.+++++ .++.|.+||+.+++.+..+..+...+.+++|+|+++.+++++.++.|.+||+.+++.+..+..
T Consensus 148 ~s~dg--~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 148 ADDAT--NTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp EETTT--TEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred ECCCC--CEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC
Confidence 99998 5666655 478999999999999988885666788999999999999999999999999999988877762
Q ss_pred --cccCCeeEEEEecCCCCeEEEEe-CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe-cCCcEE
Q 016457 165 --SHVEDVTQVHFVPNNQNKVVSAS-VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT-HIETLS 240 (389)
Q Consensus 165 --~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~ 240 (389)
++...+..++|+|+++ .+++++ .++.|.+||+.++. .+..+.. .. ...++|+ ++++.++++. .++.|.
T Consensus 226 ~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~----~~~~~~~-~~-~~~~~~s-~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQ-RAFITDSKAAEVLVVDTRNGN----ILAKVAA-PE-SLAVLFN-PARNEAYVTHRQAGKVS 297 (353)
T ss_dssp CSSSCCCEEEEEEETTTT-EEEEEESSSSEEEEEETTTCC----EEEEEEC-SS-CCCEEEE-TTTTEEEEEETTTTEEE
T ss_pred CCCCCcccceEEECCCCC-EEEEEeCCCCEEEEEECCCCc----EEEEEEc-CC-CceEEEC-CCCCEEEEEECCCCeEE
Confidence 2455678899999996 555554 45999999998552 2333322 22 3678999 6666555544 689999
Q ss_pred EEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEE
Q 016457 241 IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 241 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 286 (389)
+||..+++.+..+.. ...+..++|+|+|+.+|+
T Consensus 298 ~~d~~~~~~~~~~~~-------------~~~~~~~~~s~dg~~l~v 330 (353)
T 3vgz_A 298 VIDAKSYKVVKTFDT-------------PTHPNSLALSADGKTLYV 330 (353)
T ss_dssp EEETTTTEEEEEEEC-------------CSEEEEEEECTTSCEEEE
T ss_pred EEECCCCeEEEEEec-------------CCCCCeEEEcCCCCEEEE
Confidence 999999988877764 246789999999995433
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=5.3e-23 Score=178.86 Aligned_cols=282 Identities=10% Similarity=0.078 Sum_probs=185.0
Q ss_pred eEEEEec----CCeEEEEeCC--Cceeee-eecCCCCcEEEEEEeCCCCCCEEEEEec---CCeEEEEEccCCe--EEEE
Q 016457 52 LMAVSLS----TNVVKLYSPV--TGQYSG-ECKGHSSTVNQISFSGPSTPHVLHSCSS---DGTIRAWDTRSFH--EVWS 119 (389)
Q Consensus 52 ~l~~~~~----d~~i~iw~~~--~~~~~~-~~~~~~~~v~~i~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~--~~~~ 119 (389)
.+++|+. ++.|.+|.++ +++... ....+...+..++|+|++ + |++++. ++.|.+|++.+++ .+..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg--~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKD--C-LYSVDKEDDEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTC--E-EEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCC--e-EEEEEecCCCceEEEEEecCCcEEEeee
Confidence 4555532 4567777654 455433 233455677889999998 5 555544 6899999998765 4444
Q ss_pred EEcCCCCeEEEEEeCCCCeEEEee-cCCeEEEEECcC-C--ceeeeeeec--------ccCCeeEEEEecCCCCeEEEEe
Q 016457 120 VTAGSQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRN-K--KQVACLEES--------HVEDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~-~--~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~ 187 (389)
+..+...+..++|+|+++.+++++ .++.|.+||+.. + +.+..+... +...+.+++|+|+++ ++++..
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~ 159 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL 159 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC
Confidence 455667889999999999999888 589999999963 2 233333210 112488999999997 888877
Q ss_pred CCCcEEEEecCCCCCCCccceeee-ccCCceeeEEEecCCCcEEEE-EecCCcEEEEEcCC--Cce--eEEeeccccccc
Q 016457 188 VDGLICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFGETNKHLWC-LTHIETLSIWDWKD--GQN--VASFENARSLAS 261 (389)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~--~~~--~~~~~~~~~~~~ 261 (389)
.++.|.+||+.... ......... .....+..++|+ ++++++++ ...++.|.+|++.. ++. +..+.... .
T Consensus 160 ~~~~v~~~~~~~~g-~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~---~ 234 (347)
T 3hfq_A 160 GSDKVYVYNVSDAG-QLSEQSVLTMEAGFGPRHLVFS-PDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIP---A 234 (347)
T ss_dssp TTTEEEEEEECTTS-CEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSC---T
T ss_pred CCCEEEEEEECCCC-cEEEeeeEEcCCCCCCceEEEC-CCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecC---C
Confidence 88999999998221 111111112 223467789999 67775555 56678999999874 432 22222111 0
Q ss_pred CCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC-CccccCCCeEEEecccceeeeeccCCCcccCCCCCCC
Q 016457 262 DSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG-GAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSH 340 (389)
Q Consensus 262 ~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 340 (389)
. ......+..++|+|+|+.+ +++...++.|.+|++... .. ..+..+. .+...+..+ +|+||
T Consensus 235 ~---~~~~~~~~~i~~spdG~~l-~v~~~~~~~v~v~~~~~~g~~----~~~~~~~-~~~~~~~~~---------~~spd 296 (347)
T 3hfq_A 235 D---YTAHNGAAAIRLSHDGHFL-YVSNRGYNTLAVFAVTADGHL----TLIQQIS-TEGDFPRDF---------DLDPT 296 (347)
T ss_dssp T---CCSCCEEEEEEECTTSCEE-EEEEETTTEEEEEEECGGGCE----EEEEEEE-CSSSCCCEE---------EECTT
T ss_pred C---CCCCCcceeEEECCCCCEE-EEEeCCCCEEEEEEECCCCcE----EEeEEEe-cCCCCcCeE---------EECCC
Confidence 0 0012457889999999843 255667899999999732 21 1123333 444556677 99999
Q ss_pred ceeEEEecC-CCeEEEEeccC
Q 016457 341 GIFGWTGGE-DGRLCCWLSDD 360 (389)
Q Consensus 341 ~~~l~s~~~-dg~v~iW~~~~ 360 (389)
|++|++++. ++.|.+|+++.
T Consensus 297 g~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 297 EAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp SSEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEEcCCCcEEEEEEeC
Confidence 998888765 58999997764
No 151
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=4.5e-23 Score=179.30 Aligned_cols=274 Identities=11% Similarity=0.056 Sum_probs=187.2
Q ss_pred EEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCC-CcEEEEEEeCCCCCCEE-EEEecCCeEEEEEccCCeEEEEE
Q 016457 43 EIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHS-STVNQISFSGPSTPHVL-HSCSSDGTIRAWDTRSFHEVWSV 120 (389)
Q Consensus 43 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~ 120 (389)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|++ +.+ +++..++.|.+||+.+++.+..+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN--RTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC--CEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 46788899999999999999999999999888876543 257889999998 554 55667899999999999988888
Q ss_pred EcCC------CCeEEEEEeCCCCeEEEeecC------------CeEEEEECcCCcee---eeeeecccCCeeEEEEecCC
Q 016457 121 TAGS------QEIFCFSFGGSTDYLLAAGCG------------SQIQFWDWRNKKQV---ACLEESHVEDVTQVHFVPNN 179 (389)
Q Consensus 121 ~~~~------~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~ 179 (389)
..+. ..+.+++|+|+++.+++++.+ +.|.+||+.+++.. ..+. +...+.+++|+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP--MPRQVYLMRAADDG 159 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE--CCSSCCCEEECTTS
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc--CCCcccceeECCCC
Confidence 7542 237889999999999998865 89999999985433 3333 44568999999999
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCCCccceeeeccC--C----------------------ceeeEEEecCCCcEE-EEEe
Q 016457 180 QNKVVSASVDGLICTFDTGGDINDDDLLESVINVG--T----------------------SVGKVGFFGETNKHL-WCLT 234 (389)
Q Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~----------------------~i~~~~~~~~~~~~l-~~~~ 234 (389)
+ +++ ++ +.|.+||+.++. ....+.... . ....++++ +++... ....
T Consensus 160 ~-l~~-~~--~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~ 230 (349)
T 1jmx_B 160 S-LYV-AG--PDIYKMDVKTGK----YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF-KDDKQDPATAD 230 (349)
T ss_dssp C-EEE-ES--SSEEEECTTTCC----EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCE
T ss_pred c-EEE-cc--CcEEEEeCCCCc----eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeec-CCCcCCccccc
Confidence 5 444 43 349999998653 122221110 0 12234444 211100 0000
Q ss_pred cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC-CCCeEEEEEecCCceEEEEEeccCCccccCCCeE
Q 016457 235 HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG-EGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEA 313 (389)
Q Consensus 235 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~ 313 (389)
....+..++..+++.. .+.... +...+..++|+| +++ +++++ ++.|++||+.+++. +.
T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~sp~dg~--~l~~~--~~~v~~~d~~~~~~------~~ 289 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTH-TQEFAD----------LTELYFTGLRSPKDPN--QIYGV--LNRLAKYDLKQRKL------IK 289 (349)
T ss_dssp EEEEEEEEETTTCCEE-EEEEEE----------CSSCEEEEEECSSCTT--EEEEE--ESEEEEEETTTTEE------EE
T ss_pred cceeEEEEeccCCcEE-eccccc----------CCCcceeeEecCCCCC--EEEEE--cCeEEEEECccCeE------EE
Confidence 1112223555554322 111111 335678899999 998 55555 88999999998765 44
Q ss_pred EEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 314 VLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 314 ~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.+. ....+.++ +|+|+|++|++++.++.|++|++...
T Consensus 290 ~~~--~~~~~~~~---------~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 290 AAN--LDHTYYCV---------AFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEE--CSSCCCEE---------EECSSSSCEEEESBSSEEEEEETTTT
T ss_pred EEc--CCCCccce---------EECCCCCEEEEecCCCeEEEEecccc
Confidence 444 22345667 99999999999999999999999865
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.3e-22 Score=193.13 Aligned_cols=263 Identities=14% Similarity=0.117 Sum_probs=189.2
Q ss_pred CCCCeEEEEecCc-eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCC-----ceeeeeecCCCCc--------
Q 016457 18 DNVNSIKRFGLKN-SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT-----GQYSGECKGHSST-------- 82 (389)
Q Consensus 18 ~~~~~i~~w~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~-------- 82 (389)
+.++.|++||+.. ....+.. ...+.+++|+|||+.|+++ .++.|++|++.+ ++.......+...
T Consensus 98 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 98 FTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp EETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred EECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 3558999999863 3333433 6778899999999999996 589999999998 7766554444333
Q ss_pred ------EEEEEEeCCCCCCEEEEEe---------------------------------cCCeEEEEEccCCeEEEEEE--
Q 016457 83 ------VNQISFSGPSTPHVLHSCS---------------------------------SDGTIRAWDTRSFHEVWSVT-- 121 (389)
Q Consensus 83 ------v~~i~~~~~~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~-- 121 (389)
+.+++|+|++ ++|++++ .+..|.+||+.+++......
T Consensus 177 ~ee~~~~~~~~~SpDg--~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKG--SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp GGCTTCCCSEEECTTS--SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhcCCCceEEECCCC--CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 4899999999 7898887 44679999999887654432
Q ss_pred cCCCCeEEEEEeCCCCeEEEeecCC-----eEEEEECcCCceeeeee-ecccC---CeeEEEEec--CCCCeEEEEeCCC
Q 016457 122 AGSQEIFCFSFGGSTDYLLAAGCGS-----QIQFWDWRNKKQVACLE-ESHVE---DVTQVHFVP--NNQNKVVSASVDG 190 (389)
Q Consensus 122 ~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~-~~~~~---~v~~~~~~~--~~~~~l~~~~~d~ 190 (389)
.+...+.+++|+|+++.+++++.++ .|.+||+.+++....+. ..+.. .+.+++|+| +++ ++++++.++
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g 333 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG 333 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCC
Confidence 3457799999999999999887765 89999999884443332 12222 246789999 996 899999999
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceee-EEEecCCCcEEEEE-ecCC----cEEEEEcCCCceeEEeecccccccCCc
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGK-VGFFGETNKHLWCL-THIE----TLSIWDWKDGQNVASFENARSLASDSW 264 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~l~~~-~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~ 264 (389)
.+++|++... ...+..+..+...+.. ++|+ ++++.|+.+ +.++ .|..||+.+++ ...+.
T Consensus 334 ~~~l~~~~~~---~~~~~~l~~~~~~v~~~~~~s-pdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~---------- 398 (706)
T 2z3z_A 334 WNHLYLYDTT---GRLIRQVTKGEWEVTNFAGFD-PKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT---------- 398 (706)
T ss_dssp SCEEEEEETT---SCEEEECCCSSSCEEEEEEEC-TTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC----------
T ss_pred ccEEEEEECC---CCEEEecCCCCeEEEeeeEEc-CCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc----------
Confidence 9999987621 1334455556666766 7899 566665554 4444 67777777664 33333
Q ss_pred cCCCCCceeeecccCCCCeEEEEEe-cCC---ceEEEEEeccCC
Q 016457 265 TLDDVDYFVDCHYPGEGENLWVIGG-TGA---GTVGYFPVNYGG 304 (389)
Q Consensus 265 ~~~~~~~i~~~~~~~~~~~~~l~~g-~~d---g~i~i~~~~~~~ 304 (389)
+...+..++|+|+|+ +++.. +.+ +.|++||+.+++
T Consensus 399 ---~~~~~~~~~~spdg~--~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 399 ---PESGMHRTQLSPDGS--AIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ---CSSSEEEEEECTTSS--EEEEEEECSSCSCEEEEEESSSCE
T ss_pred ---CCCceEEEEECCCCC--EEEEEecCCCCCcEEEEEECCCCe
Confidence 336688999999998 44443 332 579999998764
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=5.8e-24 Score=202.87 Aligned_cols=283 Identities=12% Similarity=0.033 Sum_probs=193.8
Q ss_pred EEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCC---cEEEEEEeCCCCCCEEEEEec---------CCeEEEE
Q 016457 42 FEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSS---TVNQISFSGPSTPHVLHSCSS---------DGTIRAW 109 (389)
Q Consensus 42 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~i~~~~~~~~~~l~s~~~---------dg~i~iw 109 (389)
.+++|+|+++++++ +.|+.|++||+.+++....+.+|.. .+.+++|+|++ ++|++++. ++.|++|
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg--~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDR--QFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTS--SEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCC--CeEEEEecCceeEEeecceEEEEE
Confidence 37789999965554 4699999999999988777765543 38999999999 78888876 7899999
Q ss_pred EccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCe-----------------eE
Q 016457 110 DTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV-----------------TQ 172 (389)
Q Consensus 110 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v-----------------~~ 172 (389)
|+.+++.+..... ...+..++|+|+++.|+.+. ++.|++||+.+++.......++...+ .+
T Consensus 96 d~~~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 96 DLSNGEFVRGNEL-PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp ETTTTEECCSSCC-CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred ECCCCccccceec-CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 9998876311111 35688999999999988875 78999999988876543322333222 58
Q ss_pred EEEecCCCCeEEEEeCCC----------------------------------cEEEEecCCCCCC-Cccc---eeeeccC
Q 016457 173 VHFVPNNQNKVVSASVDG----------------------------------LICTFDTGGDIND-DDLL---ESVINVG 214 (389)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~-~~~~---~~~~~~~ 214 (389)
++|+|+|+ .|++++.|. .|++||+.++... ...+ ..+..+.
T Consensus 174 ~~wSPDG~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 174 LWWSPNGK-FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp EEECTTSS-EEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred EEECCCCC-EEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 99999996 888877552 7889999854210 0000 1123466
Q ss_pred CceeeEEEecCCCcEEEEEecCC----cEEEEE----cCCCceeEEee---cccccccCCccCCCCCcee-----eeccc
Q 016457 215 TSVGKVGFFGETNKHLWCLTHIE----TLSIWD----WKDGQNVASFE---NARSLASDSWTLDDVDYFV-----DCHYP 278 (389)
Q Consensus 215 ~~i~~~~~~~~~~~~l~~~~~d~----~i~i~d----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~-----~~~~~ 278 (389)
..+..++|+ ++++++++....+ .|.+|| +.+++....+. . .|...+. .+.|+
T Consensus 253 ~~~~~~~~S-pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 253 YYFSWLTWV-TDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEE-----------SRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp EEEEEEEES-SSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEE-----------CSSSCSSSSSCCCCEEC
T ss_pred ceEEEeEEe-CCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccc-----------cCCceEccccCCccEEC
Confidence 788999999 5577776644332 488899 77765543331 1 1345555 78999
Q ss_pred CCCCeEEEEEecCCc--eEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecC-----CC
Q 016457 279 GEGENLWVIGGTGAG--TVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGE-----DG 351 (389)
Q Consensus 279 ~~~~~~~l~~g~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~-----dg 351 (389)
|+|+.+++++...+| .|++|++.+++. ..+. .+...|..+ .++ +++.|+..+. ++
T Consensus 321 pdg~~l~~~~~~~~g~~~l~~~~~~~~~~-------~~lt-~~~~~v~~~---------~~~-d~~~i~~~~~~~~~~~~ 382 (719)
T 1z68_A 321 YDAISYYKIFSDKDGYKHIHYIKDTVENA-------IQIT-SGKWEAINI---------FRV-TQDSLFYSSNEFEEYPG 382 (719)
T ss_dssp TTSSCEEEEEECTTSCEEEEEESSCSTTC-------EECS-CSSSCEEEE---------EEE-CSSEEEEEESCGGGCTT
T ss_pred CCCCeEEEEEEccCCceEEEEEECCCCce-------Eecc-cCceEEEEE---------EEE-eCCEEEEEEecCCCCCc
Confidence 999966555565665 566677766543 4443 444456665 455 6555554443 48
Q ss_pred eEEEEeccC
Q 016457 352 RLCCWLSDD 360 (389)
Q Consensus 352 ~v~iW~~~~ 360 (389)
.+++|.++.
T Consensus 383 ~~~l~~~~~ 391 (719)
T 1z68_A 383 RRNIYRISI 391 (719)
T ss_dssp CBEEEEEEC
T ss_pred eEEEEEEeC
Confidence 899999874
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=1.6e-21 Score=170.42 Aligned_cols=282 Identities=11% Similarity=0.096 Sum_probs=185.6
Q ss_pred cCCCCeEEEEec----CCeEEEEeC--CCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC----CeEEEEEccC--C
Q 016457 47 KNDWSLMAVSLS----TNVVKLYSP--VTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD----GTIRAWDTRS--F 114 (389)
Q Consensus 47 ~~~~~~l~~~~~----d~~i~iw~~--~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d----g~i~iwd~~~--~ 114 (389)
.+...++++|+. ++.|.+|.+ .+++.......+...+..++|+|++ ++|++++.+ +.|.+|++.. +
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg--~~l~~~~~~~~~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADG--KFVYSVNEFSKDQAAVSAFAFDKEKG 87 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTS--SEEEEEECCSSTTCEEEEEEEETTTT
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCC--CEEEEEEccCCCCCcEEEEEEeCCCC
Confidence 344456666643 568999876 4454433222266778889999999 788888875 7999999875 4
Q ss_pred e--EEEEEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeee-----ec--------ccCCeeEEEEecC
Q 016457 115 H--EVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLE-----ES--------HVEDVTQVHFVPN 178 (389)
Q Consensus 115 ~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~-----~~--------~~~~v~~~~~~~~ 178 (389)
+ .+.....+......+++ +++.+++++. ++.|.+|++.....+..+. .+ +...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spd 165 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPD 165 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTT
T ss_pred cEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCC
Confidence 3 34444445567778888 7777887775 8899999997543332211 01 1223588999999
Q ss_pred CCCeEEE-EeCCCcEEEEecCCCCC----C-Ccc----ceeeeccCCceeeEEEecCCCcEEEEEe-cCCcEEEEEcCCC
Q 016457 179 NQNKVVS-ASVDGLICTFDTGGDIN----D-DDL----LESVINVGTSVGKVGFFGETNKHLWCLT-HIETLSIWDWKDG 247 (389)
Q Consensus 179 ~~~~l~~-~~~d~~i~i~d~~~~~~----~-~~~----~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~ 247 (389)
++ ++++ ...++.|.+|++..... . ... ..........+..++|+ ++++++++++ .++.|.+|++.++
T Consensus 166 g~-~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 166 GK-YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFN-SDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp SS-EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEEC-TTSSEEEEEETTTCEEEEEEEETT
T ss_pred CC-EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEc-CCCCEEEEEcCCCCeEEEEEecCC
Confidence 96 5544 44588999999884321 0 000 11223345567899999 7788777776 6899999999876
Q ss_pred cee--EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec-C-CceEEEEEec--cCCccccCCCeEEEecccce
Q 016457 248 QNV--ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT-G-AGTVGYFPVN--YGGAATIGPPEAVLVGGHTA 321 (389)
Q Consensus 248 ~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-~-dg~i~i~~~~--~~~~~~~~~~~~~~~~~h~~ 321 (389)
+.. ..+.... .+......++|+|+|+ +|+++. . ++.|.+|++. +++. ..+..+. . ..
T Consensus 244 ~~~~~~~~~~~~---------~~~~~~~~i~~spdg~--~l~v~~~~~~~~i~v~~~~~~~g~~----~~~~~~~-~-g~ 306 (361)
T 3scy_A 244 MLDEIQTVAADT---------VNAQGSGDIHLSPDGK--YLYASNRLKADGVAIFKVDETNGTL----TKVGYQL-T-GI 306 (361)
T ss_dssp EEEEEEEEESCS---------SCCCCEEEEEECTTSS--EEEEEECSSSCEEEEEEECTTTCCE----EEEEEEE-C-SS
T ss_pred ceEEeEEEecCC---------CCCCCcccEEECCCCC--EEEEECCCCCCEEEEEEEcCCCCcE----EEeeEec-C-CC
Confidence 542 2222111 1234567999999999 554444 4 5899999996 3332 0122332 2 33
Q ss_pred eeeeccCCCcccCCCCCCCceeEEEec-CCCeEEEEeccC
Q 016457 322 VVRSVLPMPSVQGRPAQSHGIFGWTGG-EDGRLCCWLSDD 360 (389)
Q Consensus 322 ~v~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~v~iW~~~~ 360 (389)
.+..+ +|+|||++|++++ .++.|.+|+++.
T Consensus 307 ~~~~~---------~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 307 HPRNF---------IITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp CCCEE---------EECTTSCEEEEEETTTTEEEEEEECT
T ss_pred CCceE---------EECCCCCEEEEEECCCCCEEEEEEEC
Confidence 45666 9999999888876 679999988764
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=3.4e-22 Score=176.46 Aligned_cols=292 Identities=10% Similarity=-0.017 Sum_probs=198.2
Q ss_pred eeeeeec-CcceEE-----EeecCCCCeEEEEec-CC--eEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe
Q 016457 31 SIQTNFG-DDYVFE-----IVPKNDWSLMAVSLS-TN--VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS 101 (389)
Q Consensus 31 ~~~~~~~-~~~v~~-----~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~ 101 (389)
.+..+.. ...... .+|+|||+.|+.++. ++ .|.+||+.+++......++...+..+.|+|++ +.|+.++
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg--~~l~~~~ 99 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD--DALFYVK 99 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS--SEEEEEE
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC--CEEEEEe
Confidence 4444444 333444 789999999999887 66 48889999998887777776666678899999 7999999
Q ss_pred cCCeEEEEEccCCeEEEEEEcCCCCeEEEE--EeCCCCeEEEee----------------------cCCeEEEEECcCCc
Q 016457 102 SDGTIRAWDTRSFHEVWSVTAGSQEIFCFS--FGGSTDYLLAAG----------------------CGSQIQFWDWRNKK 157 (389)
Q Consensus 102 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~d~~i~iwd~~~~~ 157 (389)
.++.|.+||+.+++....+..+...+.... ++|++..++... .+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 999999999999988777777655554444 477777776421 24789999999886
Q ss_pred eeeeeeecccCCeeEEEEec-CCCCeEEEEeCC------CcEEEEecCCCCCCCccceeeeccC--CceeeEEEecCCCc
Q 016457 158 QVACLEESHVEDVTQVHFVP-NNQNKVVSASVD------GLICTFDTGGDINDDDLLESVINVG--TSVGKVGFFGETNK 228 (389)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~ 228 (389)
..... .+...+..+.|+| +++ .|+....+ ..|.++|..++. ...+..+. ..+...+|+ ++++
T Consensus 180 ~~~l~--~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~s-pdg~ 250 (388)
T 3pe7_A 180 STVIL--QENQWLGHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGTN-----MRKVKTHAEGESCTHEFWV-PDGS 250 (388)
T ss_dssp EEEEE--EESSCEEEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSCC-----CEESCCCCTTEEEEEEEEC-TTSS
T ss_pred eEEee--cCCccccccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCCc-----eEEeeeCCCCcccccceEC-CCCC
Confidence 55443 3667789999999 886 77766653 378888877432 23333333 357788999 6676
Q ss_pred EEEE-EecCC----cEEEEEcCCCceeEE--eecccccccCCccCCCC-CceeeecccCCCCeEEEEE-------ecCCc
Q 016457 229 HLWC-LTHIE----TLSIWDWKDGQNVAS--FENARSLASDSWTLDDV-DYFVDCHYPGEGENLWVIG-------GTGAG 293 (389)
Q Consensus 229 ~l~~-~~~d~----~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~-------g~~dg 293 (389)
.|+. +..++ .|++||+.+++.... +.... +. .......|+|+|+.+++.. ...+.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~----------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 251 ALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACS----------HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp CEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEE----------EEEECTTSSEEEEEECCC------------CCCC
T ss_pred EEEEEecCCCCCcceEEEEecCCCceEEEEcCCCce----------eeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 5544 33322 399999998874332 22100 00 0122347999998432221 14567
Q ss_pred eEEEEEeccCCccccCCCeEEEecccce-----------eeeeccCCCcccCCCCCCCceeEEEec-CCCeEEEEeccC
Q 016457 294 TVGYFPVNYGGAATIGPPEAVLVGGHTA-----------VVRSVLPMPSVQGRPAQSHGIFGWTGG-EDGRLCCWLSDD 360 (389)
Q Consensus 294 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~v~iW~~~~ 360 (389)
.|++||+.+++. ..+. .|.. .+..+ +|+|||++|+.++ .+|...||.++-
T Consensus 321 ~i~~~d~~~~~~-------~~l~-~~~~~~~~~~~~~~~~~~~~---------~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 321 FLYVFNMKNGTQ-------HRVA-RHDTSWKVFEGDRQVTHPHP---------SFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEEEEETTTTEE-------EEEE-ECCCCCCCBTTBSSTTCCCC---------EECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred EEEEEeccCCce-------EEec-cccCcccccccccccCCCCc---------cCCCCCCEEEEEecCCCceeEEEEEC
Confidence 899999998764 4444 3433 23444 8999998777654 678888888764
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.2e-22 Score=181.09 Aligned_cols=199 Identities=10% Similarity=0.058 Sum_probs=151.1
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce----------eee-----eecCCCCcEEEEEEeCCCCCCEEE----
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ----------YSG-----ECKGHSSTVNQISFSGPSTPHVLH---- 98 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----------~~~-----~~~~~~~~v~~i~~~~~~~~~~l~---- 98 (389)
...++.+++++++.++++++.++ +++|+..... .+. ....+...|.+++|+|++ ++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg--~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN--LTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS--CEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC--CEEEEEEe
Confidence 44688999999999999999887 8888753210 000 011256679999999999 6888
Q ss_pred EEecCCeEEEEEccCC--------eE---EEEEEcCCCCeEEEEEeCC-CCeEEEeecCCeEEEEECcCCceeeeeeecc
Q 016457 99 SCSSDGTIRAWDTRSF--------HE---VWSVTAGSQEIFCFSFGGS-TDYLLAAGCGSQIQFWDWRNKKQVACLEESH 166 (389)
Q Consensus 99 s~~~dg~i~iwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (389)
+|+.|++|++||+.++ +. +..+.+|...|.+++|+|+ +..+++++.||.|++||++++..+.... +|
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~-~~ 191 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL-PS 191 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE-CG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc-CC
Confidence 7889999999998765 22 4455668899999999998 6778888889999999999987766665 68
Q ss_pred cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec-------cCCceeeEEEecCCCcEEEE-EecCC-
Q 016457 167 VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN-------VGTSVGKVGFFGETNKHLWC-LTHIE- 237 (389)
Q Consensus 167 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~l~~-~~~d~- 237 (389)
...|++++|+|++. +|++|+.||.|++||.+.. ....+.. |...+.+++|+ +++.++++ .+.+|
T Consensus 192 ~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~v~w~-~~~~~l~~~~~~dg~ 264 (434)
T 2oit_A 192 TVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPTLQ-----EKKVIPCPPFYESDHPVRVLDVLWI-GTYVFAIVYAAADGT 264 (434)
T ss_dssp GGCEEEEEECTTSS-CEEEEETTSCEEEECTTCC-----EEEEECCCTTCCTTSCEEEEEEEEE-ETTEEEEEEEETTCC
T ss_pred CCceeEEEEcCCCC-EEEEEcCCCcEEEEccCCc-----ccccccCCcccCCCCceeEEEEEEe-cCceEEEEEccCCCc
Confidence 89999999999995 9999999999999999821 1122211 23378999999 55555544 33443
Q ss_pred -----cEEEEEcCCC
Q 016457 238 -----TLSIWDWKDG 247 (389)
Q Consensus 238 -----~i~i~d~~~~ 247 (389)
.+++|++...
T Consensus 265 ~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 265 LETSPDVVMALLPKK 279 (434)
T ss_dssp SSSCCEEEEEECCCT
T ss_pred cCCCCceEEEEeccC
Confidence 3899999865
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.5e-21 Score=174.05 Aligned_cols=160 Identities=11% Similarity=0.078 Sum_probs=129.7
Q ss_pred CcceEEEeecCCCCeEE----EEecCCeEEEEeCCCc--------ee---eeeecCCCCcEEEEEEeCCCCCCEEEEEec
Q 016457 38 DDYVFEIVPKNDWSLMA----VSLSTNVVKLYSPVTG--------QY---SGECKGHSSTVNQISFSGPSTPHVLHSCSS 102 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~----~~~~d~~i~iw~~~~~--------~~---~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~ 102 (389)
...|.+++|+|++++|+ +|+.|+.|+|||+.++ +. +..+.+|...|.+++|+|+.. .+|++++.
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVP-SMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCT-TEEEEEET
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCC-CEEEEEEC
Confidence 45799999999999999 6788999999998765 22 355677999999999999832 79999999
Q ss_pred CCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee------cccCCeeEEEEe
Q 016457 103 DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE------SHVEDVTQVHFV 176 (389)
Q Consensus 103 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~ 176 (389)
||+|++||++++..+.....|...|.+++|+|++.+|++++.||.|++||++ ++....+.. .|...+.++.|+
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~ 249 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWI 249 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEE
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEe
Confidence 9999999999998777777788899999999999999999999999999998 555554431 123379999999
Q ss_pred cCCCCeEEE-EeCCC------cEEEEecCCC
Q 016457 177 PNNQNKVVS-ASVDG------LICTFDTGGD 200 (389)
Q Consensus 177 ~~~~~~l~~-~~~d~------~i~i~d~~~~ 200 (389)
+++. ++++ +..+| .+++|+++..
T Consensus 250 ~~~~-~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 250 GTYV-FAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ETTE-EEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCce-EEEEEccCCCccCCCCceEEEEeccC
Confidence 9874 4433 33343 3899999854
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=5.2e-22 Score=189.41 Aligned_cols=307 Identities=8% Similarity=-0.021 Sum_probs=201.1
Q ss_pred CCCCeEEEEecCc--eeeeeecCc----ceEEEeecCCCCeEEEEec---------CCeEEEEeCCCceeeeeecCCCCc
Q 016457 18 DNVNSIKRFGLKN--SIQTNFGDD----YVFEIVPKNDWSLMAVSLS---------TNVVKLYSPVTGQYSGECKGHSST 82 (389)
Q Consensus 18 ~~~~~i~~w~~~~--~~~~~~~~~----~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~~~~ 82 (389)
+.+++|++|+... ....+.+.. .|.+++|+|||++|++++. ++.|++||+.+++.+.... ....
T Consensus 33 ~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~~~ 111 (719)
T 1z68_A 33 SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LPRP 111 (719)
T ss_dssp CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CCSS
T ss_pred cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee-cCcc
Confidence 3588999999853 333343322 3999999999999999876 6899999999887731111 1256
Q ss_pred EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEE-EcCCCCe-----------------EEEEEeCCCCeEEEeec
Q 016457 83 VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV-TAGSQEI-----------------FCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~ 144 (389)
+..++|+|++ +.|+++. ++.|++|++.+++..... .++...| .+++|+|+++.|+.++.
T Consensus 112 ~~~~~~SPDG--~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 112 IQYLCWSPVG--SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp BCCEEECSST--TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred cccceECCCC--CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 8899999999 6888875 789999999888765432 1222222 48999999999998876
Q ss_pred CC----------------------------------eEEEEECcCCcee--------eeeeecccCCeeEEEEecCCCCe
Q 016457 145 GS----------------------------------QIQFWDWRNKKQV--------ACLEESHVEDVTQVHFVPNNQNK 182 (389)
Q Consensus 145 d~----------------------------------~i~iwd~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~ 182 (389)
|. .|++||+.+++.. ..+. .|...+..++|+|++. +
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~SpD~~-~ 266 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA-SSDYYFSWLTWVTDER-V 266 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH-TSCEEEEEEEESSSSE-E
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC-CCcceEEEeEEeCCCe-E
Confidence 42 7889999887653 1122 4777899999999974 6
Q ss_pred EEEEeCC----CcEEEEe----cCCCCCCCccce-eeeccCCcee-----eEEEecCCCcEEEE--EecCC--cEEEEEc
Q 016457 183 VVSASVD----GLICTFD----TGGDINDDDLLE-SVINVGTSVG-----KVGFFGETNKHLWC--LTHIE--TLSIWDW 244 (389)
Q Consensus 183 l~~~~~d----~~i~i~d----~~~~~~~~~~~~-~~~~~~~~i~-----~~~~~~~~~~~l~~--~~~d~--~i~i~d~ 244 (389)
+++.... ..|.+|| ..++... .... ....+...+. .+.|+ ++++.++. +..++ .|.+||+
T Consensus 267 ~~~~~~~~~~~~~l~~~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~g~~~l~~~~~ 344 (719)
T 1z68_A 267 CLQWLKRVQNVSVLSICDFREDWQTWDCP-KTQEHIEESRTGWAGGFFVSTPVFS-YDAISYYKIFSDKDGYKHIHYIKD 344 (719)
T ss_dssp EEEEEESSTTEEEEEEEEECSSSSSEECC-GGGEEEEECSSSCSSSSSCCCCEEC-TTSSCEEEEEECTTSCEEEEEESS
T ss_pred EEEEeccccCeEEEEEEcccCCCCCCceE-EEEecccccCCceEccccCCccEEC-CCCCeEEEEEEccCCceEEEEEEC
Confidence 6664433 2488899 6654211 1110 0134555666 78999 66664433 44555 6777787
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC----CceEEEEEecc--CCccccCCCeEEEe--
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG----AGTVGYFPVNY--GGAATIGPPEAVLV-- 316 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~----dg~i~i~~~~~--~~~~~~~~~~~~~~-- 316 (389)
.+++ ...+.. +...+..+.++ +++.+ ++++.. ++..++|.+.. +.. ....+.
T Consensus 345 ~~~~-~~~lt~------------~~~~v~~~~~~-d~~~i-~~~~~~~~~~~~~~~l~~~~~~~g~~-----~~~~l~~~ 404 (719)
T 1z68_A 345 TVEN-AIQITS------------GKWEAINIFRV-TQDSL-FYSSNEFEEYPGRRNIYRISIGSYPP-----SKKCVTCH 404 (719)
T ss_dssp CSTT-CEECSC------------SSSCEEEEEEE-CSSEE-EEEESCGGGCTTCBEEEEEECSSSSC-----CEEESSTT
T ss_pred CCCc-eEeccc------------CceEEEEEEEE-eCCEE-EEEEecCCCCCceEEEEEEeCCCCCC-----CceeccCc
Confidence 7665 334433 23456666667 77743 344444 57888998864 211 011221
Q ss_pred -cccceeeeeccCCCcccCCCCCCCceeEEE-ecCC--CeEEEEeccCC
Q 016457 317 -GGHTAVVRSVLPMPSVQGRPAQSHGIFGWT-GGED--GRLCCWLSDDS 361 (389)
Q Consensus 317 -~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s-~~~d--g~v~iW~~~~~ 361 (389)
.+|...+..+ .|+|++++++. ++.+ ..+.+|++...
T Consensus 405 ~~~~~~~~~~~---------~~s~dg~~l~~~~s~~~~p~~~l~d~~~g 444 (719)
T 1z68_A 405 LRKERCQYYTA---------SFSDYAKYYALVCYGPGIPISTLHDGRTD 444 (719)
T ss_dssp TTTTTBCBEEE---------EECGGGSSEEEEECCBSSCEEEEECSSSC
T ss_pred cCCCCCceEEE---------EECCCCCEEEEEcCCCCCCeEEEEECCCC
Confidence 1255556666 89999988764 4433 46888988654
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.90 E-value=2.1e-21 Score=168.68 Aligned_cols=266 Identities=9% Similarity=0.001 Sum_probs=180.9
Q ss_pred CccccCCCCeEEEEecCc--eeeeeecCc--ceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCC------CC
Q 016457 13 KSQSCDNVNSIKRFGLKN--SIQTNFGDD--YVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGH------SS 81 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~--~~~~~~~~~--~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~------~~ 81 (389)
..++++.++.|++||..+ .+..+.... .+..++|+|+++.++++ ..++.|.+||+.+++....+..+ ..
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~ 92 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGR 92 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccc
Confidence 345677899999999863 444554433 68899999999866544 46899999999999887776532 23
Q ss_pred cEEEEEEeCCCCCCEEEEEecC------------CeEEEEEccCCe---EEEEEEcCCCCeEEEEEeCCCCeEEEeecCC
Q 016457 82 TVNQISFSGPSTPHVLHSCSSD------------GTIRAWDTRSFH---EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS 146 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 146 (389)
.+..++|+|++ ++|++++.+ +.|.+||+.+++ .+..+..+ ..+.+++|+|++. +++++ +
T Consensus 93 ~~~~~~~spdg--~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~-l~~~~--~ 166 (349)
T 1jmx_B 93 SMYSFAISPDG--KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGS-LYVAG--P 166 (349)
T ss_dssp CSSCEEECTTS--SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSC-EEEES--S
T ss_pred cccceEECCCC--CEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC-CcccceeECCCCc-EEEcc--C
Confidence 37889999999 688888765 899999998843 33445443 4688999999988 66654 4
Q ss_pred eEEEEECcCCceeeeeeecccC-----------------------CeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC
Q 016457 147 QIQFWDWRNKKQVACLEESHVE-----------------------DVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND 203 (389)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~~~-----------------------~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (389)
.|.+||+.+++.+..+...... ....+++++++............+..+|..++.
T Consensus 167 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-- 244 (349)
T 1jmx_B 167 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK-- 244 (349)
T ss_dssp SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC--
T ss_pred cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc--
Confidence 4999999998887766521100 234456655432000000001112224444321
Q ss_pred CccceeeeccCCceeeEEEecC-CCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCC
Q 016457 204 DDLLESVINVGTSVGKVGFFGE-TNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGE 282 (389)
Q Consensus 204 ~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 282 (389)
............+..++++ + ++++++++ ++.|.+||+.+++.+..+... ..+..++|+|+++
T Consensus 245 -~~~~~~~~~~~~~~~~~~s-p~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-------------~~~~~~~~s~dg~ 307 (349)
T 1jmx_B 245 -THTQEFADLTELYFTGLRS-PKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-------------HTYYCVAFDKKGD 307 (349)
T ss_dssp -EEEEEEEECSSCEEEEEEC-SSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-------------SCCCEEEECSSSS
T ss_pred -EEecccccCCCcceeeEec-CCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-------------CCccceEECCCCC
Confidence 1111222345677889999 5 78888877 889999999999888777632 3467899999998
Q ss_pred eEEEEEecCCceEEEEEeccCCc
Q 016457 283 NLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 283 ~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+|++++.++.|++||..+++.
T Consensus 308 --~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 308 --KLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp --CEEEESBSSEEEEEETTTTEE
T ss_pred --EEEEecCCCeEEEEeccccce
Confidence 455567889999999988765
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=5.5e-22 Score=184.51 Aligned_cols=233 Identities=11% Similarity=0.057 Sum_probs=171.8
Q ss_pred CCcEEEEEEeCCCCCCEEEEEec-CCeEEEEEccCCeEEEEEEcCC-CCeEEEEEeCCCCeEEEeec---CCeEEEEECc
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSS-DGTIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGC---GSQIQFWDWR 154 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~ 154 (389)
..+|.+++|+||| +.|++++. ||+++||++.+++... +..+. ..+..++|+|+ ..++++.. +....+|.+.
T Consensus 21 ~~~~~~~~~~~DG--~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDG--DKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETT--TEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCC--CeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 5679999999999 78988876 9999999997666544 44444 68999999987 55555543 4555665554
Q ss_pred C--CceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEE
Q 016457 155 N--KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC 232 (389)
Q Consensus 155 ~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 232 (389)
. ......+. ....+...+|+|+++..+++.+.++.+.+||+.++. ...+..+.. .+++|+ ++|++|++
T Consensus 97 ~~~~g~~~~l~--~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~-----~~~l~~~~~--~~~~~s-pDG~~la~ 166 (582)
T 3o4h_A 97 TSRPGEEQRLE--AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG-----LRELARLPG--FGFVSD-IRGDLIAG 166 (582)
T ss_dssp TTSTTCCEECT--TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE-----EEEEEEESS--CEEEEE-EETTEEEE
T ss_pred ccCCCcccccc--CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc-----EEEeecCCC--ceEEEC-CCCCEEEE
Confidence 3 22222333 223355678888886555555556666799998652 233333333 789999 78899998
Q ss_pred EecC----CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc--eEEEEEeccCCcc
Q 016457 233 LTHI----ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG--TVGYFPVNYGGAA 306 (389)
Q Consensus 233 ~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg--~i~i~~~~~~~~~ 306 (389)
++.+ +.|++||+.+++.. .+.. |...+..++|+|||+ +|+++..++ .|++||+.+++.
T Consensus 167 ~~~~~~~~~~i~~~d~~~g~~~-~l~~------------~~~~~~~~~~SpDG~--~l~~~~~~~~~~i~~~d~~~~~~- 230 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSGGLR-VFDS------------GEGSFSSASISPGMK--VTAGLETAREARLVTVDPRDGSV- 230 (582)
T ss_dssp EEEEETTEEEEEEEETTTCCCE-EECC------------SSCEEEEEEECTTSC--EEEEEECSSCEEEEEECTTTCCE-
T ss_pred EEEcCCCCeEEEEEcCCCCCce-Eeec------------CCCccccceECCCCC--EEEEccCCCeeEEEEEcCCCCcE-
Confidence 8777 78999999888755 4444 557889999999999 677887888 899999998775
Q ss_pred ccCCCeEEEecccceeeeeccCCCcccCCC--------CCCCceeEEEecCCCeEEEEec
Q 016457 307 TIGPPEAVLVGGHTAVVRSVLPMPSVQGRP--------AQSHGIFGWTGGEDGRLCCWLS 358 (389)
Q Consensus 307 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~--------~s~~~~~l~s~~~dg~v~iW~~ 358 (389)
. +..+|...+..+ + |+|||.++++++.||.+++|++
T Consensus 231 ------~-~~~~~~~~~~~~---------~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 231 ------E-DLELPSKDFSSY---------RPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ------E-ECCCSCSHHHHH---------CCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ------E-EccCCCcChhhh---------hhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 3 334777777777 6 9999999999999999999998
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=2.3e-20 Score=163.13 Aligned_cols=264 Identities=12% Similarity=0.167 Sum_probs=176.7
Q ss_pred CCCCeEEEEecCc------eeeeeecCcceEEEeecCCCCeEEEEecC----CeEEEEeCCC--ce--eeeeecCCCCcE
Q 016457 18 DNVNSIKRFGLKN------SIQTNFGDDYVFEIVPKNDWSLMAVSLST----NVVKLYSPVT--GQ--YSGECKGHSSTV 83 (389)
Q Consensus 18 ~~~~~i~~w~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~--~~--~~~~~~~~~~~v 83 (389)
+.++.|.+|.+.. .+... ....+..++|+|++++|++++.+ +.|.+|++.. ++ .+.....+....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 4567899997631 12222 35667789999999999999875 7999998765 43 333444455667
Q ss_pred EEEEEeCCCCCCEEEEEe-cCCeEEEEEccCCeEEE----EEE--c--------CCCCeEEEEEeCCCCeEEEeec-CCe
Q 016457 84 NQISFSGPSTPHVLHSCS-SDGTIRAWDTRSFHEVW----SVT--A--------GSQEIFCFSFGGSTDYLLAAGC-GSQ 147 (389)
Q Consensus 84 ~~i~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~----~~~--~--------~~~~v~~~~~~~~~~~l~~~~~-d~~ 147 (389)
..+++ ++ ++|++++ .++.|.+|++.....+. .+. + +...+.+++|+|+++.+++++. ++.
T Consensus 103 ~~~~~--dg--~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 103 CYLTT--NG--KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp EEEEE--CS--SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEE--CC--CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 77888 56 5666655 68899999997543221 111 1 1223588999999998887776 789
Q ss_pred EEEEECcCCce------e------eeeeecccCCeeEEEEecCCCCeEEEEe-CCCcEEEEecCCCCCCCccceeee---
Q 016457 148 IQFWDWRNKKQ------V------ACLEESHVEDVTQVHFVPNNQNKVVSAS-VDGLICTFDTGGDINDDDLLESVI--- 211 (389)
Q Consensus 148 i~iwd~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~--- 211 (389)
|.+|++..... + ..........+..++|+|+++ ++++++ .++.|.+||+.++. ...+....
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~~~g~--~~~~~~~~~~~ 255 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEIGGTVIAFRYADGM--LDEIQTVAADT 255 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTCEEEEEEEETTE--EEEEEEEESCS
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCCCCeEEEEEecCCc--eEEeEEEecCC
Confidence 99998875431 1 122223456688999999996 666665 68999999998442 11122221
Q ss_pred ccCCceeeEEEecCCCcEEEEEecC--CcEEEEEcC--CCc--eeEEeecccccccCCccCCCCCceeeecccCCCCeEE
Q 016457 212 NVGTSVGKVGFFGETNKHLWCLTHI--ETLSIWDWK--DGQ--NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLW 285 (389)
Q Consensus 212 ~~~~~i~~~~~~~~~~~~l~~~~~d--~~i~i~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 285 (389)
.+......++|+ +++++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|+|+ +
T Consensus 256 ~~~~~~~~i~~s-pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-------------g~~~~~~~~spdg~--~ 319 (361)
T 3scy_A 256 VNAQGSGDIHLS-PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-------------GIHPRNFIITPNGK--Y 319 (361)
T ss_dssp SCCCCEEEEEEC-TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-------------SSCCCEEEECTTSC--E
T ss_pred CCCCCcccEEEC-CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-------------CCCCceEEECCCCC--E
Confidence 222446789999 778888766654 899999986 344 2333321 14577899999998 5
Q ss_pred EEEec-CCceEEEEEec--cCCc
Q 016457 286 VIGGT-GAGTVGYFPVN--YGGA 305 (389)
Q Consensus 286 l~~g~-~dg~i~i~~~~--~~~~ 305 (389)
|++++ .++.|.+|+++ +++.
T Consensus 320 l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 320 LLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEECCCCCEEEEEEECCCCcE
Confidence 56555 67899997665 4443
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=2.5e-20 Score=162.96 Aligned_cols=280 Identities=14% Similarity=0.086 Sum_probs=180.7
Q ss_pred eEEEEecC--CeEEEEeC--CCceeee--eec-CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc-CCeEEEEEEcC
Q 016457 52 LMAVSLST--NVVKLYSP--VTGQYSG--ECK-GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR-SFHEVWSVTAG 123 (389)
Q Consensus 52 ~l~~~~~d--~~i~iw~~--~~~~~~~--~~~-~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~ 123 (389)
.+++|+.. +.|.+|++ .+++... ... .....+..++|+|++ ++|++++.+ .|.+|++. +++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg--~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHER--KNIYGAAMK-KWSSFAVKSPTEIVHEASHP 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTS--SEEEEEEBT-EEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCC--CEEEEEccc-eEEEEEECCCCCEEEeeEee
Confidence 45566553 56877765 4565422 221 233468899999999 788888888 99999997 77765433311
Q ss_pred -CCCeEEEEEeCCCCe--EEEee-------------cCCeEEEEECc-CCceeeeeee---cccCCeeEEEEecCCCCeE
Q 016457 124 -SQEIFCFSFGGSTDY--LLAAG-------------CGSQIQFWDWR-NKKQVACLEE---SHVEDVTQVHFVPNNQNKV 183 (389)
Q Consensus 124 -~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~iwd~~-~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l 183 (389)
...+.+++|+|+++. ++++. .++.+.+|++. .++....+.. .+...+.+++|+|+|+ ++
T Consensus 81 ~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l 159 (365)
T 1jof_A 81 IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YL 159 (365)
T ss_dssp CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EE
T ss_pred cCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EE
Confidence 133566899999885 33442 58899999997 4555433331 2456799999999996 77
Q ss_pred EEEe-CCCcEEEEecC-CCCCCCccceeee--ccCCceeeEEEecCCCcEEEEEec-CCcEEEEEcC--CCceeE---Ee
Q 016457 184 VSAS-VDGLICTFDTG-GDINDDDLLESVI--NVGTSVGKVGFFGETNKHLWCLTH-IETLSIWDWK--DGQNVA---SF 253 (389)
Q Consensus 184 ~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~~~---~~ 253 (389)
+++. .++.|++||+. ++. ...+.... .+...+..++|+ ++++++++++. ++.|.+|++. +++... .+
T Consensus 160 ~~~~~~~~~v~~~~~~~~g~--~~~~~~~~~~~~g~~p~~~~~s-pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 160 YSADLTANKLWTHRKLASGE--VELVGSVDAPDPGDHPRWVAMH-PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp EEEETTTTEEEEEEECTTSC--EEEEEEEECSSTTCCEEEEEEC-TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEcCCCCEEEEEEECCCCC--EEEeeeEecCCCCCCCCEeEEC-CCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceE
Confidence 7665 46799999998 442 11122222 135678899999 77888877765 6899999865 455432 22
Q ss_pred ecccccccCCccCCCCC------ceeeec-ccCCCCeEEEEEecC--C----ceEEEEEec-cCCccccCCCeEE---Ee
Q 016457 254 ENARSLASDSWTLDDVD------YFVDCH-YPGEGENLWVIGGTG--A----GTVGYFPVN-YGGAATIGPPEAV---LV 316 (389)
Q Consensus 254 ~~~~~~~~~~~~~~~~~------~i~~~~-~~~~~~~~~l~~g~~--d----g~i~i~~~~-~~~~~~~~~~~~~---~~ 316 (389)
.... .. + .+|.. .+..++ |+|+|+ +|++++. + +.|.+|++. +++. .. ..
T Consensus 237 ~~~~---~~-~-~g~~~~~~~~~~~~~i~~~spdG~--~l~v~~~~~~~~~~~~i~v~~~~~~g~~-------~~~~~~~ 302 (365)
T 1jof_A 237 PLIP---PG-I-PDRDPETGKGLYRADVCALTFSGK--YMFASSRANKFELQGYIAGFKLRDCGSI-------EKQLFLS 302 (365)
T ss_dssp ESSC---TT-C-CCBCTTTSSBSEEEEEEEECTTSS--EEEEEEEESSTTSCCEEEEEEECTTSCE-------EEEEEEE
T ss_pred EcCC---CC-c-CCcccccccccccccEEEECCCCC--EEEEECCCCCCCCCCeEEEEEECCCCCE-------EEeeeee
Confidence 2110 00 0 00122 578899 999999 4444432 3 289999996 4443 22 11
Q ss_pred cccceeeeeccCCCcccCCCCCC---CceeEEEecCC-CeEEEEeccCC
Q 016457 317 GGHTAVVRSVLPMPSVQGRPAQS---HGIFGWTGGED-GRLCCWLSDDS 361 (389)
Q Consensus 317 ~~h~~~v~~~~~~~~~~~~~~s~---~~~~l~s~~~d-g~v~iW~~~~~ 361 (389)
..+...+..+ +|+| ||++|++++.+ +.|.+|+++..
T Consensus 303 ~~~~~~~~~~---------a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 303 PTPTSGGHSN---------AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECSSCCTTCC---------CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ecCCCCcccc---------eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 1233334455 8999 89999998764 89999999764
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=6.6e-20 Score=160.30 Aligned_cols=264 Identities=8% Similarity=0.012 Sum_probs=177.4
Q ss_pred CeEEEEecC---ceeeeee-----cCcceEEEeecCCCCeEEEEecCCeEEEEeCC-CceeeeeecCC-CCcEEEEEEeC
Q 016457 21 NSIKRFGLK---NSIQTNF-----GDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV-TGQYSGECKGH-SSTVNQISFSG 90 (389)
Q Consensus 21 ~~i~~w~~~---~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~-~~~v~~i~~~~ 90 (389)
+.|..|++. ..+..+. +...+..++|+|++++|++++.+ .|.+|++. +++........ .+.+..++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 467777652 1222221 13468899999999999998877 99999997 77665433211 12355689999
Q ss_pred CCCCCE--EEEEe-------------cCCeEEEEEcc-CCeEEEEEE----cCCCCeEEEEEeCCCCeEEEeec-CCeEE
Q 016457 91 PSTPHV--LHSCS-------------SDGTIRAWDTR-SFHEVWSVT----AGSQEIFCFSFGGSTDYLLAAGC-GSQIQ 149 (389)
Q Consensus 91 ~~~~~~--l~s~~-------------~dg~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~i~ 149 (389)
++ ++ +++++ .++++.+|++. +++....+. .+...+.+++|+|++++++++.. ++.|.
T Consensus 93 dg--~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~ 170 (365)
T 1jof_A 93 NT--RAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLW 170 (365)
T ss_dssp CC--EEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CC--CEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEE
Confidence 99 53 44553 68999999997 466554443 24567999999999998887765 68999
Q ss_pred EEECc-CCcee--eeeee-cccCCeeEEEEecCCCCeEEEEeC-CCcEEEEecCCCCCCCcc-ceeee-------ccCC-
Q 016457 150 FWDWR-NKKQV--ACLEE-SHVEDVTQVHFVPNNQNKVVSASV-DGLICTFDTGGDINDDDL-LESVI-------NVGT- 215 (389)
Q Consensus 150 iwd~~-~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~-~~~~~-------~~~~- 215 (389)
+||+. +++.. ..+.. .+...+..++|+|+++ ++++++. ++.|.+|++......... ...+. ++..
T Consensus 171 ~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 249 (365)
T 1jof_A 171 THRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE 249 (365)
T ss_dssp EEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred EEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence 99998 66543 23321 1356789999999996 7766664 789999987621101100 01111 1121
Q ss_pred -----ceeeEE-EecCCCcEEEEEecC-C-----cEEEEEcC-CCceeEE---eecccccccCCccCCCCCceeeecccC
Q 016457 216 -----SVGKVG-FFGETNKHLWCLTHI-E-----TLSIWDWK-DGQNVAS---FENARSLASDSWTLDDVDYFVDCHYPG 279 (389)
Q Consensus 216 -----~i~~~~-~~~~~~~~l~~~~~d-~-----~i~i~d~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~ 279 (389)
.+..++ |+ +++++|+++..+ + .|.+|++. +++.... ... +......++|+|
T Consensus 250 ~~~~~~~~~i~~~s-pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~------------~~~~~~~~a~sp 316 (365)
T 1jof_A 250 TGKGLYRADVCALT-FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT------------PTSGGHSNAVSP 316 (365)
T ss_dssp TSSBSEEEEEEEEC-TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC------------SSCCTTCCCEEE
T ss_pred cccccccccEEEEC-CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec------------CCCCcccceecC
Confidence 478899 88 778887776643 3 89999996 5654332 211 224566789999
Q ss_pred ---CCCeEEEEEecC-CceEEEEEeccC
Q 016457 280 ---EGENLWVIGGTG-AGTVGYFPVNYG 303 (389)
Q Consensus 280 ---~~~~~~l~~g~~-dg~i~i~~~~~~ 303 (389)
+|+ +|++++. ++.|.+|++...
T Consensus 317 ~~~dg~--~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 317 CPWSDE--WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTCTT--EEEEECSSSCEEEEEEEETT
T ss_pred CCcCCC--EEEEEEcCCCeEEEEEEchh
Confidence 788 6777665 489999999865
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.87 E-value=1.5e-20 Score=166.30 Aligned_cols=274 Identities=9% Similarity=-0.014 Sum_probs=184.3
Q ss_pred eEEEeecCCCCeEEEEecC---CeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE
Q 016457 41 VFEIVPKNDWSLMAVSLST---NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV 117 (389)
Q Consensus 41 v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 117 (389)
+.+++|+|||++|+.+... ..|.+||+.+++......++......+.|+|++ +.|+.++.++.|.+||+.+++..
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg--~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE--RAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS--SEEEEEETTTEEEEEETTTCCEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC--CEEEEEEcCCcEEEEECCCCCcE
Confidence 6788999999998877643 478999998887655444333333347899999 79999999999999999988876
Q ss_pred EEEEcCCCCeEE-------------------EEEeCCCCeEEEe-----ecCCeEEEEECcCCceeeeeeecccCCeeEE
Q 016457 118 WSVTAGSQEIFC-------------------FSFGGSTDYLLAA-----GCGSQIQFWDWRNKKQVACLEESHVEDVTQV 173 (389)
Q Consensus 118 ~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~ 173 (389)
.....+...... +.|+|++..++.. ..+..|.+||+.+++..... .+...+..+
T Consensus 116 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~ 193 (396)
T 3c5m_A 116 VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH--QDTAWLGHP 193 (396)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE--EESSCEEEE
T ss_pred EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec--cCCcccccc
Confidence 666654332222 3456666665544 34678999999887765444 366778999
Q ss_pred EEec-CCCCeEEEEeCC------CcEEEEecCCCCCCCccceeeecc--CCceeeEEEecCCCcEEEEEecC-----CcE
Q 016457 174 HFVP-NNQNKVVSASVD------GLICTFDTGGDINDDDLLESVINV--GTSVGKVGFFGETNKHLWCLTHI-----ETL 239 (389)
Q Consensus 174 ~~~~-~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~~~~~d-----~~i 239 (389)
.|+| ++. .|+..+.+ ..|.+||+.++. ...+..+ ...+..++|+ ++++.|+..+.+ +.|
T Consensus 194 ~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~~-----~~~l~~~~~~~~~~~~~~s-pdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 194 IYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGSN-----VRKIKEHAEGESCTHEFWI-PDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp EEETTEEE-EEEEEECSCSSSCSCCCEEEETTSCC-----CEESSCCCTTEEEEEEEEC-TTSSCEEEEEEETTTCCEEE
T ss_pred eECCCCCC-EEEEEecCCCCCCCceEEEEECCCCc-----eeEeeccCCCccccceEEC-CCCCEEEEEecCCCCccceE
Confidence 9999 674 66665543 368888887432 2222222 2357788999 677766666543 349
Q ss_pred EEEEcCCCceeEEeecccccccCCccCCCCCceeeecccC-CCCeEEEEEec----------------CCceEEEEEecc
Q 016457 240 SIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPG-EGENLWVIGGT----------------GAGTVGYFPVNY 302 (389)
Q Consensus 240 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~g~----------------~dg~i~i~~~~~ 302 (389)
++||+.+++....... .... +.|+| +|+ ++++++ .++.|++||+.+
T Consensus 267 ~~~d~~~g~~~~l~~~--------------~~~~-~~~s~~dg~--~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 267 YKANPETLENEEVMVM--------------PPCS-HLMSNFDGS--LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEECTTTCCEEEEEEC--------------CSEE-EEEECSSSS--EEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred EEEECCCCCeEEeeeC--------------CCCC-CCccCCCCc--eEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 9999988765433221 1122 78999 998 555433 347899999987
Q ss_pred CCccccCCCeEEEeccccee-----------eeeccCCCcccCCCCCCCceeEEEec-CCCeEEEEecc
Q 016457 303 GGAATIGPPEAVLVGGHTAV-----------VRSVLPMPSVQGRPAQSHGIFGWTGG-EDGRLCCWLSD 359 (389)
Q Consensus 303 ~~~~~~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~~~~s~~~~~l~s~~-~dg~v~iW~~~ 359 (389)
++. ..+. .|... +..+ +|+|||++|+.++ .++...+|.++
T Consensus 330 ~~~-------~~l~-~~~~~~~~~~~~~~~~~~~~---------~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 330 KSA-------QKLC-KHSTSWDVLDGDRQITHPHP---------SFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TBC-------CEEE-ECCCCCCCBTTBSSTTCCCC---------EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred Cce-------EEcc-CCCCccccccccccCCCCCc---------eEccCCCeEEEEecCCCCceEEEEE
Confidence 764 3343 33321 2333 8999998877665 46777777765
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=3.5e-20 Score=176.92 Aligned_cols=247 Identities=10% Similarity=0.080 Sum_probs=169.8
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCc-----EEEEEEeCCCCCCEEEEEecC---------C
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSST-----VNQISFSGPSTPHVLHSCSSD---------G 104 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----v~~i~~~~~~~~~~l~s~~~d---------g 104 (389)
....+++|+||+.+++++ |+.|++||+.+++....+.+|... ...+.|+|++ ++|+.++.+ +
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg--~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG--QFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS--SEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC--CEEEEEECCeeeEEEccce
Confidence 346689999999888886 899999999999887777776543 3457899999 788888876 5
Q ss_pred eEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCe--------------
Q 016457 105 TIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV-------------- 170 (389)
Q Consensus 105 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v-------------- 170 (389)
.+.+||+.+++.. .+..+...+...+|+|+++.|+.+ .++.|++||+.+++..+....++...+
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 5679999998764 355567789999999999998777 568999999988765432221232222
Q ss_pred ---eEEEEecCCCCeEEEEeCCC------------------------------------cEEEEecCC---CCCCCccce
Q 016457 171 ---TQVHFVPNNQNKVVSASVDG------------------------------------LICTFDTGG---DINDDDLLE 208 (389)
Q Consensus 171 ---~~~~~~~~~~~~l~~~~~d~------------------------------------~i~i~d~~~---~~~~~~~~~ 208 (389)
..+.|+|+|+ .|+.++.|. .|++||+.+ +.. ....
T Consensus 171 ~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~--~~~~ 247 (740)
T 4a5s_A 171 SAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN--ATSI 247 (740)
T ss_dssp SSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC--CCEE
T ss_pred CCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc--ceEE
Confidence 3589999996 787775332 477788875 410 0122
Q ss_pred eee------ccCCceeeEEEecCCCcEEEEEec----CCcEEEEEcCCCc----ee--EEeecccccccCCccCCCCCce
Q 016457 209 SVI------NVGTSVGKVGFFGETNKHLWCLTH----IETLSIWDWKDGQ----NV--ASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 209 ~~~------~~~~~i~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~i 272 (389)
.+. .+...+..++|+ ++++.++.... +..|.+||+.+++ +. ..+... .|...+
T Consensus 248 ~l~~~~~~~~~~~~~~~~~ws-pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~----------~~~~~v 316 (740)
T 4a5s_A 248 QITAPASMLIGDHYLCDVTWA-TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM----------STTGWV 316 (740)
T ss_dssp EECCCHHHHTSCEEEEEEEEE-ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE----------CSSSCS
T ss_pred EecCCccCCCCCeEEEEEEEe-CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec----------cCCceE
Confidence 222 266678999999 66776555433 2379999998887 21 111000 033333
Q ss_pred e-----eecccCCCCeEEEEEecCC--ceEEEEEeccCCc
Q 016457 273 V-----DCHYPGEGENLWVIGGTGA--GTVGYFPVNYGGA 305 (389)
Q Consensus 273 ~-----~~~~~~~~~~~~l~~g~~d--g~i~i~~~~~~~~ 305 (389)
. ...|+|||+.+++.....+ ..|++|+..+++.
T Consensus 317 ~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 317 GRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp SSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred ccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 3 6889999995432343344 4688888887664
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=4.9e-19 Score=154.13 Aligned_cols=281 Identities=11% Similarity=0.048 Sum_probs=191.6
Q ss_pred CCCCeEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEEec----------CCeEEEEeCCCceeeeeecCC------
Q 016457 18 DNVNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVSLS----------TNVVKLYSPVTGQYSGECKGH------ 79 (389)
Q Consensus 18 ~~~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~------ 79 (389)
..|+.|.+||.. +.+.++.....- .++|+||+++++++.. ++.|.+||..+++.+..+...
T Consensus 28 ~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred cccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 347899999975 445555543333 8999999999999863 578999999998888776532
Q ss_pred CCcEEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCeEEEE-EEcCCCCeEEEEEeCCC-CeEEEeecCCeEEEEECcC
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFHEVWS-VTAGSQEIFCFSFGGST-DYLLAAGCGSQIQFWDWRN 155 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~ 155 (389)
......++++|++ ++|+++.. +++|.+||+.+++.+.. +... ....+.+.|.+ ..+++.+.||.+.+|++..
T Consensus 107 g~~p~~i~~spdg--~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 107 LNYDGLFRQTTDG--KFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CCCGGGEEECTTS--SEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred CCCcceEEECCCC--CEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 2456789999999 68888764 58999999999988877 5432 23345667765 5666777799999999865
Q ss_pred -Cceeee------eeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec------c----CCcee
Q 016457 156 -KKQVAC------LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN------V----GTSVG 218 (389)
Q Consensus 156 -~~~~~~------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------~----~~~i~ 218 (389)
++.... +. ....+ ..+.+.+++. .++..+.++.|.++|+..... ........ . .....
T Consensus 183 ~g~~~~~~~~~~~~~-~~~~~-~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 183 DGKVASQSRSKQMFS-VKDDP-IFIAPALDKD-KAHFVSYYGNVYSADFSGDEV--KVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp TSSEEEEEECCCCSC-TTTSC-BCSCCEECSS-EEEEEBTTSEEEEEECSSSSC--EEEEEEESCCHHHHHTTCEECCSS
T ss_pred CCcEeeeccccceEc-CCCCc-eEEEecccCC-EEEEEeCCCeEEEEEecCCCc--eecccccccCccccccccccCCee
Confidence 444311 11 12222 2334467774 677777899999999974321 11111100 0 11122
Q ss_pred eEEEecCCCcEEEEEec-----------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEE
Q 016457 219 KVGFFGETNKHLWCLTH-----------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVI 287 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 287 (389)
.++++ +++..++++.. .+.|.+||+.+++.+..+.. + . ...++|+|+|+ +|+
T Consensus 258 ~~a~~-~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~------------~-~-p~~ia~spdg~--~l~ 320 (361)
T 2oiz_A 258 LVGLH-RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG------------R-D-ALSMTIDQQRN--LML 320 (361)
T ss_dssp CEEEE-TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC------------T-T-CCEEEEETTTT--EEE
T ss_pred EEEEe-cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec------------C-C-eeEEEECCCCC--EEE
Confidence 37888 56556665543 34899999999999998875 3 3 89999999999 566
Q ss_pred EecCCceEEEEEeccC--CccccCCCeEEEecccceeeeeccCCCcccCCCCCCCce
Q 016457 288 GGTGAGTVGYFPVNYG--GAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGI 342 (389)
Q Consensus 288 ~g~~dg~i~i~~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~ 342 (389)
+++. +.|.+||..++ +. +..+. .+....+.+ +++|+|.
T Consensus 321 v~n~-~~v~v~D~~t~~l~~------~~~i~-~~G~~P~~~---------~~~p~G~ 360 (361)
T 2oiz_A 321 TLDG-GNVNVYDISQPEPKL------LRTIE-GAAEASLQV---------QFHPVGG 360 (361)
T ss_dssp EECS-SCEEEEECSSSSCEE------EEEET-TSCSSEEEE---------EECCCSC
T ss_pred EeCC-CeEEEEECCCCccee------eEEec-cCCCCcEEE---------EecCCCC
Confidence 6655 99999999998 54 45543 444555666 7777765
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=6.7e-19 Score=153.25 Aligned_cols=282 Identities=10% Similarity=0.063 Sum_probs=193.3
Q ss_pred CCCeEEEEe------cCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe----------cCCeEEEEEcc
Q 016457 49 DWSLMAVSL------STNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS----------SDGTIRAWDTR 112 (389)
Q Consensus 49 ~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~----------~dg~i~iwd~~ 112 (389)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|++ +++++++ .+++|.+||+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg--~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDG--KKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTS--SEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCC--CEEEEEEecccccccCCCCCEEEEEECc
Confidence 555666553 3679999999999988888776655 89999999 6888776 36789999999
Q ss_pred CCeEEEEEEcC------CCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeee-eeecccCCeeEEEEecCCCCeE
Q 016457 113 SFHEVWSVTAG------SQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVAC-LEESHVEDVTQVHFVPNNQNKV 183 (389)
Q Consensus 113 ~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l 183 (389)
+++.+..+... ......++++|++++++++.. ++.|.+||+.+++.+.. +. ... ...+.+.|+++..+
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~~-~~~v~~~p~~~~~~ 166 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA--AAG-CWSVIPQPNRPRSF 166 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG--GTT-EEEEEECTTSSSEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec--CCC-cceeEEcCCCCeeE
Confidence 99998888753 245678999999999999875 58999999999988877 54 222 23366788875588
Q ss_pred EEEeCCCcEEEEecCCCCCCCccc---eeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce--eEEeecccc
Q 016457 184 VSASVDGLICTFDTGGDINDDDLL---ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN--VASFENARS 258 (389)
Q Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~ 258 (389)
++.+.||.+.+|++.......... ..+.....+ ..+.+. +++..++..+.++.+.++|+..... ...+.....
T Consensus 167 ~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 167 MTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPA-LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp EEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCE-ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred EEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEec-ccCCEEEEEeCCCeEEEEEecCCCceecccccccCc
Confidence 899999999999986421100000 001111112 223334 4455667777889999999875532 222211000
Q ss_pred -cccCCccCCCCCceeeecccCCCCeEEEEEe-c--------CCceEEEEEeccCCccccCCCeEEEecccceeeeeccC
Q 016457 259 -LASDSWTLDDVDYFVDCHYPGEGENLWVIGG-T--------GAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLP 328 (389)
Q Consensus 259 -~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g-~--------~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 328 (389)
.....|. ......++|+|+++++|++.. . ..+.|.+||+.+++. +..+. .+. +.++
T Consensus 245 ~~~~~~~~---p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~------v~~i~-~~~--p~~i-- 310 (361)
T 2oiz_A 245 EDKAKNWV---PGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR------VARIP-GRD--ALSM-- 310 (361)
T ss_dssp HHHHTTCE---ECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE------EEEEE-CTT--CCEE--
T ss_pred cccccccc---cCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE------EEEEe-cCC--eeEE--
Confidence 0000000 011223689999987665432 1 135899999999876 67776 444 8888
Q ss_pred CCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 329 MPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 329 ~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+|+|||++|++++. +.|.+||....
T Consensus 311 -------a~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 311 -------TIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp -------EEETTTTEEEEECS-SCEEEEECSSS
T ss_pred -------EECCCCCEEEEeCC-CeEEEEECCCC
Confidence 99999999999886 99999998876
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=3.1e-18 Score=147.37 Aligned_cols=246 Identities=13% Similarity=0.124 Sum_probs=180.5
Q ss_pred CcceEEEeecCCCCeEEEEecC------------------------CeEEEEeCCCceeeeeec-CCCCcEEEEEEeCCC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLST------------------------NVVKLYSPVTGQYSGECK-GHSSTVNQISFSGPS 92 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~~~~~ 92 (389)
-+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. ++-.....+++.+++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999988887766 479999998898876664 355678999999998
Q ss_pred CCCEEEEEecCCeEEEEEccCCe-EEEEEE---------cCCCCeEEEEEeC-CCCeEEEee-cCCeEEEEECcCCceee
Q 016457 93 TPHVLHSCSSDGTIRAWDTRSFH-EVWSVT---------AGSQEIFCFSFGG-STDYLLAAG-CGSQIQFWDWRNKKQVA 160 (389)
Q Consensus 93 ~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~iwd~~~~~~~~ 160 (389)
+++++...++.|++||..... .+..+. .+-.....++++| ++..+++.+ .++.|++|| .+++.+.
T Consensus 103 --~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~ 179 (329)
T 3fvz_A 103 --NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVT 179 (329)
T ss_dssp --CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEE
T ss_pred --CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEE
Confidence 688888889999999986442 455552 2344689999998 454444444 489999999 5677766
Q ss_pred eeee---------cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceee--eccCCceeeEEEecCCCcE
Q 016457 161 CLEE---------SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV--INVGTSVGKVGFFGETNKH 229 (389)
Q Consensus 161 ~~~~---------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~ 229 (389)
.+.. ++-.....|+++|++.+++++...++.|++||..++. .+..+ ..+...+..+++.| +..
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~----~~~~~~~~~~~~~~~~~~~~p--g~~ 253 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE----FVREIKHASFGRNVFAISYIP--GFL 253 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC----EEEEECCTTTTTCEEEEEEET--TEE
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc----EEEEEeccccCCCcceeeecC--CEE
Confidence 6641 1223488999999843588888889999999998442 23333 23456778888984 433
Q ss_pred EEEEe-------cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 230 LWCLT-------HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 230 l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
+.+.+ .+..|++|+..+++.+..+.... .+......++++|+|. ++++...++.|++|++..
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~---------~~~~~p~~ia~~~dG~--lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR---------KHFDMPHDIVASEDGT--VYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS---------SCCSSEEEEEECTTSE--EEEEESSSCCEEEEEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC---------CccCCeeEEEECCCCC--EEEEECCCCEEEEEeCCc
Confidence 33332 33489999999999888875211 1446788999999995 677888899999999875
Q ss_pred C
Q 016457 303 G 303 (389)
Q Consensus 303 ~ 303 (389)
.
T Consensus 323 ~ 323 (329)
T 3fvz_A 323 K 323 (329)
T ss_dssp C
T ss_pred c
Confidence 3
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=1.8e-17 Score=139.71 Aligned_cols=242 Identities=12% Similarity=0.129 Sum_probs=174.9
Q ss_pred CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEc------CCCCeEEEEEeCCCCeEEEeec--CCeEE
Q 016457 78 GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA------GSQEIFCFSFGGSTDYLLAAGC--GSQIQ 149 (389)
Q Consensus 78 ~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~--d~~i~ 149 (389)
++-..+.++++.+++ .++++...++.|.+||.. ++.+..+.. +...+.++++.+.++.++++.. ++.|.
T Consensus 27 g~~~~p~~v~~~~~g--~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN--DIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTTC--CEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCCC--CEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 455678999999988 688888889999999987 666666642 2356889999545566666653 79999
Q ss_pred EEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee--ccCCceeeEEEecCCC
Q 016457 150 FWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI--NVGTSVGKVGFFGETN 227 (389)
Q Consensus 150 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 227 (389)
+|| .+++.+..+...+...+..++++|++. ++++...++.|.+||.... .+..+. .+...+..++++ +++
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~-----~~~~~~~~~~~~~p~~i~~~-~~g 175 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGN-----VLHKFGCSKHLEFPNGVVVN-DKQ 175 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSC-----EEEEEECTTTCSSEEEEEEC-SSS
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCC-----EEEEeCCCCccCCcEEEEEC-CCC
Confidence 999 567777666523446789999999995 8888778899999997632 222222 233467899999 677
Q ss_pred cEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc-eEEEEEeccCCcc
Q 016457 228 KHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG-TVGYFPVNYGGAA 306 (389)
Q Consensus 228 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg-~i~i~~~~~~~~~ 306 (389)
.++++...++.|++||. +++.+..+.... +...+..++++++|+ ++++...++ .|.+|+.. ++.
T Consensus 176 ~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g----------~~~~p~~i~~d~~G~--l~v~~~~~~~~i~~~~~~-g~~- 240 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNY-EGQYLRQIGGEG----------ITNYPIGVGINSNGE--ILIADNHNNFNLTIFTQD-GQL- 240 (286)
T ss_dssp EEEEEEGGGTEEEEEET-TCCEEEEESCTT----------TSCSEEEEEECTTCC--EEEEECSSSCEEEEECTT-SCE-
T ss_pred CEEEEECCCCEEEEEcC-CCCEEEEEccCC----------ccCCCcEEEECCCCC--EEEEeCCCCEEEEEECCC-CCE-
Confidence 77777777899999997 455666654321 235678999999987 667776665 99999964 332
Q ss_pred ccCCCeEEEecccc--eeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 307 TIGPPEAVLVGGHT--AVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 307 ~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+..+. .+. ..+.++ +++|+|+++++ +.|+.|++|++...
T Consensus 241 -----~~~~~-~~~~~~~~~~i---------~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 241 -----ISALE-SKVKHAQCFDV---------ALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -----EEEEE-ESSCCSCEEEE---------EEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred -----EEEEc-ccCCCCcceeE---------EECCCCcEEEE-CCCCeEEEEEcccc
Confidence 34443 232 235566 89999998777 56999999998653
No 170
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.84 E-value=1.9e-16 Score=144.69 Aligned_cols=317 Identities=10% Similarity=-0.040 Sum_probs=212.4
Q ss_pred cCCCCeEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCC--CceeeeeecCCCCcEEEEEEe---
Q 016457 17 CDNVNSIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV--TGQYSGECKGHSSTVNQISFS--- 89 (389)
Q Consensus 17 ~~~~~~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~i~~~--- 89 (389)
...++.|.++|.. +.+.++.....+..+.|+|||+++++++.++.|.+||+. +++.+..+.... ....++|+
T Consensus 173 ~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~ 251 (567)
T 1qks_A 173 LRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKME 251 (567)
T ss_dssp ETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCST
T ss_pred eCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEcccc
Confidence 4456899999986 355556556677899999999999999999999999995 788887777533 46789999
Q ss_pred -CCCCCCEEEEEe-cCCeEEEEEccCCeEEEEEEcC-----------CCCeEEEEEeCCCCeEEEeec-CCeEEEEECcC
Q 016457 90 -GPSTPHVLHSCS-SDGTIRAWDTRSFHEVWSVTAG-----------SQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRN 155 (389)
Q Consensus 90 -~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~ 155 (389)
|++ +++++++ .+++|.++|..+.+.+..+... ...+..+..++.+..+++.-. .|.|.++|...
T Consensus 252 ~pDG--k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~ 329 (567)
T 1qks_A 252 GWED--KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 329 (567)
T ss_dssp TCTT--TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred CCCC--CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCC
Confidence 688 5666554 5699999999999998887642 126778888887776666554 79999999886
Q ss_pred CceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec---cCCceeeEEEecCC-CcEEE
Q 016457 156 KKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN---VGTSVGKVGFFGET-NKHLW 231 (389)
Q Consensus 156 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~-~~~l~ 231 (389)
.+.+.............+.|+|+++.++++...++.|.++|+.+++ ....+.. ...+-....|..++ +..++
T Consensus 330 ~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k----l~~~i~vgg~~Phpg~g~~~~~p~~g~v~~ 405 (567)
T 1qks_A 330 LNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK----LVAIEDTGGQTPHPGRGANFVHPTFGPVWA 405 (567)
T ss_dssp SSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE----EEEEEECSSSSBCCTTCEEEEETTTEEEEE
T ss_pred CccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc----EEEEEeccCcCCCCccceeeECCCCCcEEE
Confidence 5433221112445677899999997444555568899999999653 2222221 11111233343255 44444
Q ss_pred EEe-cCCcEEEEEcCC-------CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe-cC----CceEEEE
Q 016457 232 CLT-HIETLSIWDWKD-------GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG-TG----AGTVGYF 298 (389)
Q Consensus 232 ~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g-~~----dg~i~i~ 298 (389)
++. .++.|.++|..+ .+.++++... ...-..+..+|+++.+|+... .- ...|.+|
T Consensus 406 t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~------------g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~ 473 (567)
T 1qks_A 406 TSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL------------GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVF 473 (567)
T ss_dssp EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS------------CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEE
T ss_pred eCCCCCCeEEEecCCCCCCccccCEEEEEEecC------------CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEE
Confidence 443 468999999987 5667776642 123355778999995554331 11 4689999
Q ss_pred EeccCCccccCCCeEEEec-------ccceeeeeccCCCcccCCCCCCCceeEEEec-----CCCeEEEEeccCC
Q 016457 299 PVNYGGAATIGPPEAVLVG-------GHTAVVRSVLPMPSVQGRPAQSHGIFGWTGG-----EDGRLCCWLSDDS 361 (389)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~-----~dg~v~iW~~~~~ 361 (389)
|+.+.+..........+.. .....+..+ .|+++|+++..+. .++.|.++|..+.
T Consensus 474 d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 474 DIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQG---------EFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp EGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEE---------EECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred ECCcccccccCCCcEEeccccccccCCCCcceEee---------eECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 9987611000011122221 012356666 8999999877652 3799999998776
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.84 E-value=5.9e-18 Score=145.66 Aligned_cols=247 Identities=13% Similarity=0.070 Sum_probs=179.4
Q ss_pred CCcEEEEEEeCCCCCCEEEEEecC------------------------CeEEEEEccCCeEEEEEEc-CCCCeEEEEEeC
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSSD------------------------GTIRAWDTRSFHEVWSVTA-GSQEIFCFSFGG 134 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~d------------------------g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~ 134 (389)
-+.+.+|+++|++ +++++...+ ++|.+||..+++.+..+.. +-.....++++|
T Consensus 23 l~~v~~va~d~~G--~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKN--NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTC--CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCC--CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 4679999999998 688877766 4799999998988766652 345789999998
Q ss_pred CCCeEEEeecCCeEEEEECcCCc-eeeeee--------ecccCCeeEEEEec-CCCCeEEEEe-CCCcEEEEecCCCCCC
Q 016457 135 STDYLLAAGCGSQIQFWDWRNKK-QVACLE--------ESHVEDVTQVHFVP-NNQNKVVSAS-VDGLICTFDTGGDIND 203 (389)
Q Consensus 135 ~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~~l~~~~-~d~~i~i~d~~~~~~~ 203 (389)
++..+++...++.|++||..... .+..+. ..+......|+++| ++ +++++.+ .++.|++||....
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~~~~~g~--- 176 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQFSPSGK--- 176 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEEECTTSC---
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEEEcCCCC---
Confidence 88866665668999999976442 444442 13344688999999 66 4777776 6899999996522
Q ss_pred Cccceeeecc----------CCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCcee
Q 016457 204 DDLLESVINV----------GTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFV 273 (389)
Q Consensus 204 ~~~~~~~~~~----------~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (389)
.+..+... -.....+++++..+.++++...++.|++|+..+++.+..+.... +...+.
T Consensus 177 --~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~----------~~~~~~ 244 (329)
T 3fvz_A 177 --FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS----------FGRNVF 244 (329)
T ss_dssp --EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT----------TTTCEE
T ss_pred --EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc----------cCCCcc
Confidence 22222211 12378999994447888888889999999999898888875432 446678
Q ss_pred eecccC------CCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe--cccceeeeeccCCCcccCCCCCCCceeEE
Q 016457 274 DCHYPG------EGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV--GGHTAVVRSVLPMPSVQGRPAQSHGIFGW 345 (389)
Q Consensus 274 ~~~~~~------~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~s~~~~~l~ 345 (389)
.++++| +++ ..++...+..|++|+..+++. +..+. .++......+ +++|+|.+++
T Consensus 245 ~~~~~pg~~~~~~g~--~~v~~~~~~~v~~~~~~~g~~------~~~~~~~~~~~~~p~~i---------a~~~dG~lyv 307 (329)
T 3fvz_A 245 AISYIPGFLFAVNGK--PYFGDQEPVQGFVMNFSSGEI------IDVFKPVRKHFDMPHDI---------VASEDGTVYI 307 (329)
T ss_dssp EEEEETTEEEEEECC--CCTTCSCCCCEEEEETTTCCE------EEEECCSSSCCSSEEEE---------EECTTSEEEE
T ss_pred eeeecCCEEEEeCCC--EEeccCCCcEEEEEEcCCCeE------EEEEcCCCCccCCeeEE---------EECCCCCEEE
Confidence 888988 222 222233455899999988776 44442 2455567777 9999999999
Q ss_pred EecCCCeEEEEeccCC
Q 016457 346 TGGEDGRLCCWLSDDS 361 (389)
Q Consensus 346 s~~~dg~v~iW~~~~~ 361 (389)
+...++.|++|+++..
T Consensus 308 ad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 308 GDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EESSSCCEEEEEEEEC
T ss_pred EECCCCEEEEEeCCcc
Confidence 9999999999998754
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=3.9e-17 Score=137.73 Aligned_cols=240 Identities=12% Similarity=0.097 Sum_probs=174.1
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec------CCCCcEEEEEEe-CCCCCCEEEEEec-CCeEEEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK------GHSSTVNQISFS-GPSTPHVLHSCSS-DGTIRAW 109 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------~~~~~v~~i~~~-~~~~~~~l~s~~~-dg~i~iw 109 (389)
-..+.+++++++++++++...++.|.+||.. ++.+..+. ++...+..+++. +++ .++++... ++.|.+|
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g--~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSG--DIIVTERSPTHQIQIY 105 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTT--EEEEEECGGGCEEEEE
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCC--eEEEEcCCCCCEEEEE
Confidence 3568899999999888887889999999987 66655553 244578999995 566 45555433 8899999
Q ss_pred EccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee-cccCCeeEEEEecCCCCeEEEEe
Q 016457 110 DTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE-SHVEDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 110 d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~ 187 (389)
| .+++.+..+... ...+.+++++|++..+++...++.|.+||.. ++.+..+.. .+...+..|+++|++. ++++..
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~ 182 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDN 182 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-EEEEEG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-EEEEEC
Confidence 9 567777766532 4578999999888755555568999999964 555555531 2345689999999985 778778
Q ss_pred CCCcEEEEecCCCCCCCccceeeecc--CCceeeEEEecCCCcEEEEEecCC-cEEEEEcCCCceeEEeecccccccCCc
Q 016457 188 VDGLICTFDTGGDINDDDLLESVINV--GTSVGKVGFFGETNKHLWCLTHIE-TLSIWDWKDGQNVASFENARSLASDSW 264 (389)
Q Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~~~ 264 (389)
.++.|++||.... .+..+... ...+..++++ +++.++++...++ .|.+||. +++.+..+....
T Consensus 183 ~~~~i~~~~~~g~-----~~~~~~~~g~~~~p~~i~~d-~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~------- 248 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ-----YLRQIGGEGITNYPIGVGIN-SNGEILIADNHNNFNLTIFTQ-DGQLISALESKV------- 248 (286)
T ss_dssp GGTEEEEEETTCC-----EEEEESCTTTSCSEEEEEEC-TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-------
T ss_pred CCCEEEEEcCCCC-----EEEEEccCCccCCCcEEEEC-CCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-------
Confidence 8999999998632 22333222 2567899998 6777777777776 9999995 566666665422
Q ss_pred cCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 265 TLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 265 ~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
....+.+++++|+|+ ++++ +.++.|++|++...
T Consensus 249 ---~~~~~~~i~~~~~g~--l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 249 ---KHAQCFDVALMDDGS--VVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ---CCSCEEEEEEETTTE--EEEE-ETTTEEEEEECSCC
T ss_pred ---CCCcceeEEECCCCc--EEEE-CCCCeEEEEEcccc
Confidence 223467899999986 5556 46899999998653
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=3.2e-18 Score=150.95 Aligned_cols=267 Identities=9% Similarity=-0.024 Sum_probs=179.0
Q ss_pred EEEeCCCceeeeeecCCCCcEEE-----EEEeCCCCCCEEEEEec-CC--eEEEEEccCCeEEEEEEcCCCCeEEEEEeC
Q 016457 63 KLYSPVTGQYSGECKGHSSTVNQ-----ISFSGPSTPHVLHSCSS-DG--TIRAWDTRSFHEVWSVTAGSQEIFCFSFGG 134 (389)
Q Consensus 63 ~iw~~~~~~~~~~~~~~~~~v~~-----i~~~~~~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 134 (389)
..++..++..+..+..|...... .+|+|++ +.|+.++. ++ .|.+||+.+++.......+...+..+.|+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg--~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDG--SKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTS--CEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCC--CEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC
Confidence 34577778888888777766665 8899999 68888776 66 488889998888776666655555778999
Q ss_pred CCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEE--EecCCCCeEEEE----------------------eCCC
Q 016457 135 STDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVH--FVPNNQNKVVSA----------------------SVDG 190 (389)
Q Consensus 135 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~l~~~----------------------~~d~ 190 (389)
+++.|+.++.++.|++||+.+++....+. .+...+.... ++|++. .++.. ..+.
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeee-chhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhccCCcc
Confidence 99999999999999999999988766555 4444444343 488885 66532 2346
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceeeEEEecC-CCcEEEEEecC------CcEEEEEcCCCceeEEeecccccccCC
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE-TNKHLWCLTHI------ETLSIWDWKDGQNVASFENARSLASDS 263 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~ 263 (389)
.|.+||+.++. ...+..+...+..++|+ | +++.|+....+ ..|.++|...+.. ..+....
T Consensus 169 ~l~~~d~~~g~-----~~~l~~~~~~~~~~~~s-p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~------ 235 (388)
T 3pe7_A 169 RLMRVDLKTGE-----STVILQENQWLGHPIYR-PYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA------ 235 (388)
T ss_dssp EEEEEETTTCC-----EEEEEEESSCEEEEEEE-TTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC------
T ss_pred eEEEEECCCCc-----eEEeecCCccccccEEC-CCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC------
Confidence 79999998653 44455566778999999 5 77777776653 3788888765543 3333211
Q ss_pred ccCCCCCceeeecccCCCCeEEEEEecCC---ceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCC
Q 016457 264 WTLDDVDYFVDCHYPGEGENLWVIGGTGA---GTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSH 340 (389)
Q Consensus 264 ~~~~~~~~i~~~~~~~~~~~~~l~~g~~d---g~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~ 340 (389)
....+....|+|+|+.+++++...+ +.|++||+.+++.. .+..+. ++.. ........ +|+||
T Consensus 236 ----~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~----~l~~~~-~~~~----~~~~~~~~--~~spd 300 (388)
T 3pe7_A 236 ----EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR----QLTSMP-ACSH----LMSNYDGS--LMVGD 300 (388)
T ss_dssp ----TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE----EEEEEC-CEEE----EEECTTSS--EEEEE
T ss_pred ----CCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE----EEEcCC-Ccee----eeecCCCC--eEccC
Confidence 1135778899999995433333222 24999999987741 112221 2111 10111112 68999
Q ss_pred ceeEEEe---------cCCCeEEEEeccCC
Q 016457 341 GIFGWTG---------GEDGRLCCWLSDDS 361 (389)
Q Consensus 341 ~~~l~s~---------~~dg~v~iW~~~~~ 361 (389)
|+.|+.. ..+..|++|+++..
T Consensus 301 g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (388)
T 3pe7_A 301 GSDAPVDVQDDSGYKIENDPFLYVFNMKNG 330 (388)
T ss_dssp ECCC------------CCCCEEEEEETTTT
T ss_pred CCcceeEeeeccccccCCCCEEEEEeccCC
Confidence 9988854 45678999999865
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=8.2e-18 Score=158.92 Aligned_cols=299 Identities=7% Similarity=-0.021 Sum_probs=191.5
Q ss_pred CCCCeEEEEec--Cceeeeeec-CcceE---------EEeec--CCCCe-EEEEec-CCeEEEEeCC--C-ceeeeeecC
Q 016457 18 DNVNSIKRFGL--KNSIQTNFG-DDYVF---------EIVPK--NDWSL-MAVSLS-TNVVKLYSPV--T-GQYSGECKG 78 (389)
Q Consensus 18 ~~~~~i~~w~~--~~~~~~~~~-~~~v~---------~~~~~--~~~~~-l~~~~~-d~~i~iw~~~--~-~~~~~~~~~ 78 (389)
+.++...+|.. +.....+.. ...+. ...|+ |||+. |+.+.. +..|.++++. . ++ ...+..
T Consensus 44 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~ 122 (662)
T 3azo_A 44 AEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTP 122 (662)
T ss_dssp TTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSC
T ss_pred ccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccC
Confidence 34667778874 233444443 44444 45555 99998 776654 5667777765 2 43 444444
Q ss_pred -----CCCcEEEEEEeCCCCCCEEEEEecC----------CeEEEEEccC------CeEEEEEE-cCCCCeEEEEEeCCC
Q 016457 79 -----HSSTVNQISFSGPSTPHVLHSCSSD----------GTIRAWDTRS------FHEVWSVT-AGSQEIFCFSFGGST 136 (389)
Q Consensus 79 -----~~~~v~~i~~~~~~~~~~l~s~~~d----------g~i~iwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~ 136 (389)
|...+..++|+|++ +.|++++.+ ..|.+||+.+ ++.. .+. .+...+..++|+|++
T Consensus 123 ~~~~~~~~~~~~~~~spDg--~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG 199 (662)
T 3azo_A 123 VSAVGGGLRWADPVLLPER--GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDG 199 (662)
T ss_dssp CCCSTTCEEEEEEEEETTT--TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTS
T ss_pred CccCCCCccccCcEECCCC--CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCC
Confidence 66789999999999 788888876 5899999987 5543 344 445678889999999
Q ss_pred CeEEEeecC--------CeEEEEECc-CC--ceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC--cEEEEecCCCCCC
Q 016457 137 DYLLAAGCG--------SQIQFWDWR-NK--KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG--LICTFDTGGDIND 203 (389)
Q Consensus 137 ~~l~~~~~d--------~~i~iwd~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~ 203 (389)
+.|+.++.+ ..|++||+. ++ .....+...+...+..+.|+|+|+ +++++..++ .|.+||+.++.
T Consensus 200 ~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~-- 276 (662)
T 3azo_A 200 RQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA-- 276 (662)
T ss_dssp SEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC--
T ss_pred CEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc--
Confidence 999888754 379999998 56 234444425578899999999997 888888888 56666664332
Q ss_pred CccceeeeccCCc---------eeeEEEecCCCcEEEEEecCCcEEEE--EcCCCceeEEeecccccccCCccCCCCCce
Q 016457 204 DDLLESVINVGTS---------VGKVGFFGETNKHLWCLTHIETLSIW--DWKDGQNVASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 204 ~~~~~~~~~~~~~---------i~~~~~~~~~~~~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (389)
...+..+... +..++|+ +++.++++++. +.++|| |+.+++ +..+.. +...+
T Consensus 277 ---~~~l~~~~~~~~~p~w~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~------------~~~~~ 338 (662)
T 3azo_A 277 ---ATQLCRREEEFAGPLWTPGMRWFAPL-ANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG------------PWTEW 338 (662)
T ss_dssp ---EEESSCCSSBSSCCCCSTTCCSEEEC-TTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS------------SCCEE
T ss_pred ---eeecccccccccCccccccCceEeEe-CCCEEEEEEEc-CccEEEEEECCCCc-EEEecC------------CCCeE
Confidence 1222222111 4578888 67888888888 988898 555454 555544 33555
Q ss_pred eeecccCCCCeEEEEEecCCceEEEE--EeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC
Q 016457 273 VDCHYPGEGENLWVIGGTGAGTVGYF--PVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED 350 (389)
Q Consensus 273 ~~~~~~~~~~~~~l~~g~~dg~i~i~--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d 350 (389)
..+ ++++++.+++++++.+....+| |+.+++. ..+...|...+... .+++...+.+.+..+
T Consensus 339 ~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-------~~l~~~~~~~~~~~---------~~~~~~~~~~~~~dg 401 (662)
T 3azo_A 339 AAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRA-------RTIGARHTDPVDPA---------YYPEPQIRTFTAPDG 401 (662)
T ss_dssp EEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCE-------EEEESCCCCSSCGG---------GSCCCEEEEEECTTS
T ss_pred EEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCce-------EEeecCCcccCCcc---------ccCcceEEEEEcCCC
Confidence 555 1556676667777777554454 5556553 44443443333333 444444444554444
Q ss_pred CeEEEEec
Q 016457 351 GRLCCWLS 358 (389)
Q Consensus 351 g~v~iW~~ 358 (389)
..|..|-.
T Consensus 402 ~~i~~~~~ 409 (662)
T 3azo_A 402 REIHAHIY 409 (662)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 45655543
No 175
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=7.6e-18 Score=160.86 Aligned_cols=306 Identities=9% Similarity=-0.003 Sum_probs=188.7
Q ss_pred CCeEEEEecC--ceeeeeec-Cc-----ceEEEeecCCCCeEEEEecC---------CeEEEEeCCCceeeeeecCCCCc
Q 016457 20 VNSIKRFGLK--NSIQTNFG-DD-----YVFEIVPKNDWSLMAVSLST---------NVVKLYSPVTGQYSGECKGHSST 82 (389)
Q Consensus 20 ~~~i~~w~~~--~~~~~~~~-~~-----~v~~~~~~~~~~~l~~~~~d---------~~i~iw~~~~~~~~~~~~~~~~~ 82 (389)
+++|++|++. +....+.+ .. ....++|||||++|+.++.+ +.+.+||+.+++.. .+..|...
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~ 113 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNN 113 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTT
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCc
Confidence 8899999985 34444444 21 22457899999999999875 56779999998765 45667788
Q ss_pred EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEE-EcCCCCe-----------------EEEEEeCCCCeEEEeec
Q 016457 83 VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSV-TAGSQEI-----------------FCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~ 144 (389)
+...+|+|+| +.|+.+ .|+.|.+|++.+++..+.. .++...+ ..+.|+|+++.|+.+..
T Consensus 114 ~~~~~~SPdG--~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 114 TQWVTWSPVG--HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (740)
T ss_dssp EEEEEECSST--TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred ceeeEECCCC--CEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEE
Confidence 9999999999 688887 4789999999887754321 1222222 34899999999888753
Q ss_pred C-C-----------------------------------eEEEEECcC---Cc--eeeeeee-----cccCCeeEEEEecC
Q 016457 145 G-S-----------------------------------QIQFWDWRN---KK--QVACLEE-----SHVEDVTQVHFVPN 178 (389)
Q Consensus 145 d-~-----------------------------------~i~iwd~~~---~~--~~~~~~~-----~~~~~v~~~~~~~~ 178 (389)
| + .|++||+.+ ++ ....+.. +|...+..++|+|+
T Consensus 191 d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd 270 (740)
T 4a5s_A 191 NDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ 270 (740)
T ss_dssp ECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET
T ss_pred cccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC
Confidence 2 1 588899988 63 2233331 26677999999999
Q ss_pred CCCeEEEEeC----CCcEEEEecCCCCCC--Cccceee--eccCCcee-----eEEEecCCCcEEE-EEec-CC--cEEE
Q 016457 179 NQNKVVSASV----DGLICTFDTGGDIND--DDLLESV--INVGTSVG-----KVGFFGETNKHLW-CLTH-IE--TLSI 241 (389)
Q Consensus 179 ~~~~l~~~~~----d~~i~i~d~~~~~~~--~~~~~~~--~~~~~~i~-----~~~~~~~~~~~l~-~~~~-d~--~i~i 241 (389)
++ .++.... +..|.+||+.++... ......+ ..+...+. ...|+ ++++.++ ..+. +| .|++
T Consensus 271 g~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fs-pDG~~l~~~~s~~~G~~~l~~ 348 (740)
T 4a5s_A 271 ER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT-LDGNSFYKIISNEEGYRHICY 348 (740)
T ss_dssp TE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC-TTSSEEEEEEECTTSCEEEEE
T ss_pred Ce-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEc-CCCCEEEEEEEcCCCceEEEE
Confidence 96 6665533 236999999876310 0011111 33444444 78899 6777655 5543 43 7888
Q ss_pred EEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC----CceEEEEEe--ccCCccccCCCeEEE
Q 016457 242 WDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG----AGTVGYFPV--NYGGAATIGPPEAVL 315 (389)
Q Consensus 242 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~----dg~i~i~~~--~~~~~~~~~~~~~~~ 315 (389)
||+.+++.. .+.. ....+..+. .++++.++ ++++. .+...||.+ ..+.. ...+
T Consensus 349 ~~~~~~~~~-~lT~------------g~~~v~~~~-~~d~~~i~-f~~~~~~~~~~~~~ly~v~~~g~~~------~~~l 407 (740)
T 4a5s_A 349 FQIDKKDCT-FITK------------GTWEVIGIE-ALTSDYLY-YISNEYKGMPGGRNLYKIQLIDYTK------VTCL 407 (740)
T ss_dssp EETTCSSCE-ESCC------------SSSCEEEEE-EECSSEEE-EEESCGGGCTTCBEEEEEETTEEEE------EEES
T ss_pred EECCCCceE-eccc------------CCEEEEEEE-EEeCCEEE-EEEecCCCCCceeEEEEEECCCCCc------ceee
Confidence 898766544 3332 113344332 24466443 34433 234455544 33221 0011
Q ss_pred e---cccceeeeeccCCCcccCCCCCCCceeEEEecCC---CeEEEEeccCC
Q 016457 316 V---GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED---GRLCCWLSDDS 361 (389)
Q Consensus 316 ~---~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d---g~v~iW~~~~~ 361 (389)
. .+....+..+ .|||++++++..... ..+.+++....
T Consensus 408 t~~~~~~~~~~~~~---------~~S~dg~~~~~~~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 408 SCELNPERCQYYSV---------SFSKEAKYYQLRCSGPGLPLYTLHSSVND 450 (740)
T ss_dssp STTTSTTTBCBEEE---------EECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred ccccCCCCCceEEE---------EECCCCCEEEEEeCCCCCCEEEEEECCCC
Confidence 1 0112344555 899999876544322 35777776644
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=1.9e-17 Score=142.91 Aligned_cols=285 Identities=9% Similarity=-0.018 Sum_probs=190.0
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
..|.+++|++++..++..+.++.++.| .++....+..+...+.+++|++++ ++++++..++.|.+||..+++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g--~l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQG--QLFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTS--CEEEEETTTCEEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCC--CEEEEECCCCEEEEEeCCCCcEEE
Confidence 457788999998877777778889999 356666777777788999999988 677788889999999998887665
Q ss_pred EEEcCCCCeEEEEEeCCCCeEEEeecC----CeEEEEECcCCceeeeee-ecccCCeeEEEEecCCCCeEEEEeC-----
Q 016457 119 SVTAGSQEIFCFSFGGSTDYLLAAGCG----SQIQFWDWRNKKQVACLE-ESHVEDVTQVHFVPNNQNKVVSASV----- 188 (389)
Q Consensus 119 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~----- 188 (389)
....+...+.+++++|++..+++...+ +.|.+||..++.....+. ..+...+..++++|++. ++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~ 159 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTN 159 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTB
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccC
Confidence 554556789999999887655555555 689999988776543332 12345789999999985 6666543
Q ss_pred -CCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEE-EEEecCCcEEEEEcCC-CceeEEeecccccccCCcc
Q 016457 189 -DGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHL-WCLTHIETLSIWDWKD-GQNVASFENARSLASDSWT 265 (389)
Q Consensus 189 -d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~ 265 (389)
.+.|..+|..++. ...+......+..++|+ ++++.| ++.+.++.|.+||+.+ +..+..+.......
T Consensus 160 ~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~-~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~----- 228 (333)
T 2dg1_A 160 PLGGVYYVSPDFRT-----VTPIIQNISVANGIALS-TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY----- 228 (333)
T ss_dssp CCEEEEEECTTSCC-----EEEEEEEESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE-----
T ss_pred CCceEEEEeCCCCE-----EEEeecCCCcccceEEC-CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe-----
Confidence 3556666665321 22222333457889999 666655 4555678999999964 43333221100000
Q ss_pred CCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccce------eeeeccCCCcccCCCCCC
Q 016457 266 LDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTA------VVRSVLPMPSVQGRPAQS 339 (389)
Q Consensus 266 ~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~------~v~~~~~~~~~~~~~~s~ 339 (389)
......+..++++++|+ +.++...++.|.+|+.. ++. +..+. .+.. .+.++ +|++
T Consensus 229 ~~~~~~~~~i~~d~~G~--l~v~~~~~~~v~~~d~~-g~~------~~~~~-~~~~~~g~~~~~~~~---------~~~~ 289 (333)
T 2dg1_A 229 FTGHEGPDSCCIDSDDN--LYVAMYGQGRVLVFNKR-GYP------IGQIL-IPGRDEGHMLRSTHP---------QFIP 289 (333)
T ss_dssp CCSSSEEEEEEEBTTCC--EEEEEETTTEEEEECTT-SCE------EEEEE-CTTGGGTCSCBCCEE---------EECT
T ss_pred cCCCCCCCceEECCCCC--EEEEEcCCCEEEEECCC-CCE------EEEEE-cCCCccccccCcceE---------EECC
Confidence 00113567899999987 55666677899999984 332 34443 2221 56677 8899
Q ss_pred CceeEEEecCCC----eEEEEecc
Q 016457 340 HGIFGWTGGEDG----RLCCWLSD 359 (389)
Q Consensus 340 ~~~~l~s~~~dg----~v~iW~~~ 359 (389)
|+..|+.++.++ .-.||.++
T Consensus 290 dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 290 GTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp TSCEEEEEEECGGGTCCEEEEEEE
T ss_pred CCCEEEEEeCccCCCCCceEEEEe
Confidence 987666555443 24455544
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.82 E-value=1.1e-18 Score=164.82 Aligned_cols=291 Identities=9% Similarity=-0.048 Sum_probs=188.0
Q ss_pred CcceEEEeecCCCCeEEEE--ecCCeEEEEeCCCceeeeeecCCCCcEE---------EEEEe--CCCCCCE-EEEEec-
Q 016457 38 DDYVFEIVPKNDWSLMAVS--LSTNVVKLYSPVTGQYSGECKGHSSTVN---------QISFS--GPSTPHV-LHSCSS- 102 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~---------~i~~~--~~~~~~~-l~s~~~- 102 (389)
...+..++|++++-+++.. ..++...||....+.....+..|...+. ...|+ |++ +. |+.++.
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg--~~~la~~~~~ 100 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAG--GPLLVFTHFG 100 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSS--SCEEEEEBTT
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCC--CeEEEEEECC
Confidence 6778999999887666666 4478899998654544556666666666 66676 888 56 555443
Q ss_pred CCeEEEEEcc--C-CeEEEEEEc-----CCCCeEEEEEeCCCCeEEEeecC----------CeEEEEECcC------Cce
Q 016457 103 DGTIRAWDTR--S-FHEVWSVTA-----GSQEIFCFSFGGSTDYLLAAGCG----------SQIQFWDWRN------KKQ 158 (389)
Q Consensus 103 dg~i~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------~~i~iwd~~~------~~~ 158 (389)
+..|.++++. . ++ ...+.. +...+.+++|+|+++.|++++.+ ..|++||+.+ ++.
T Consensus 101 ~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp TCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS
T ss_pred CCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce
Confidence 5567777765 2 33 344444 45678899999999999988876 5899999987 554
Q ss_pred eeeeeecccCCeeEEEEecCCCCeEEEEeCC--------CcEEEEecC-CCCCCCccceeee-ccCCceeeEEEecCCCc
Q 016457 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVD--------GLICTFDTG-GDINDDDLLESVI-NVGTSVGKVGFFGETNK 228 (389)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~i~d~~-~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 228 (389)
..... .+...+..++|+|+|+ .|+.++.+ ..|++||+. ++. ......+. .+...+..+.|+ ++++
T Consensus 180 ~~l~~-~~~~~~~~~~~SpDG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~--~~~~~~l~~~~~~~~~~~~~s-pdg~ 254 (662)
T 3azo_A 180 RELSD-DAHRFVTGPRLSPDGR-QAVWLAWDHPRMPWEGTELKTARVTEDGR--FADTRTLLGGPEEAIAQAEWA-PDGS 254 (662)
T ss_dssp EESSC-SCSSEECCCEECTTSS-EEEEEEECTTCCTTTCEEEEEEEECTTSC--EEEEEEEEEETTBCEEEEEEC-TTSC
T ss_pred eEEEe-cCCCcccCceECCCCC-EEEEEECCCCCCCCCCcEEEEEEECCCCc--ccccEEeCCCCCceEcceEEC-CCCe
Confidence 33331 2446788899999996 88777654 379999998 331 01233333 346788999999 6777
Q ss_pred EEEEEecCC--cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec--cCC
Q 016457 229 HLWCLTHIE--TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN--YGG 304 (389)
Q Consensus 229 ~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~--~~~ 304 (389)
+++++..++ .|.+||+.+++...............|. -.+..++|++++. ++++++. +.++||.+. +++
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~----~~~~~~~~~~~~~--~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWT----PGMRWFAPLANGL--IAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCS----TTCCSEEECTTSC--EEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccccccccCcccc----ccCceEeEeCCCE--EEEEEEc-CccEEEEEECCCCc
Confidence 888888888 6666776666544333322111111121 1145688888888 7788888 999999554 333
Q ss_pred ccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 305 AATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 305 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
. ..+. .|...+..++ +++.+.-++++++.+....+|.++
T Consensus 328 ~-------~~l~-~~~~~~~~~~--------s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 328 L-------VDAA-GPWTEWAATL--------TVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp E-------EECC-SSCCEEEEEE--------EEETTEEEEEEEETTEEEEEEEEE
T ss_pred E-------EEec-CCCCeEEEEE--------ecCCCEEEEEEcCCCCCCEEEEEE
Confidence 2 4443 5655565551 223333455566667665666544
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.82 E-value=3.1e-17 Score=142.35 Aligned_cols=258 Identities=12% Similarity=0.053 Sum_probs=175.2
Q ss_pred cceEEEeecCCCCeEEEEe---------cCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC---C--
Q 016457 39 DYVFEIVPKNDWSLMAVSL---------STNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD---G-- 104 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d---g-- 104 (389)
..+...++ ||+.++... .++.|.+||+.+++... + ..+..++|+|++ +.|+.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg--~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDG--KKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTS--SEEEEEEEETTTTEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCC--CEEEEEEeccCCCcc
Confidence 44666777 888877653 25679999998876533 3 567889999999 688877654 3
Q ss_pred eEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC---------------------------CeEEEEECcCCc
Q 016457 105 TIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG---------------------------SQIQFWDWRNKK 157 (389)
Q Consensus 105 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~i~iwd~~~~~ 157 (389)
.|.+|++.+++.......+ . +..++|+|+++.|+.++.+ ..|.+||+.+++
T Consensus 86 ~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred eEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 3778888888776655544 3 9999999999998888642 579999998887
Q ss_pred eeeeeeecccCCeeEEEEecCCCCeEEEEeCCC-------cEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEE
Q 016457 158 QVACLEESHVEDVTQVHFVPNNQNKVVSASVDG-------LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHL 230 (389)
Q Consensus 158 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 230 (389)
.+..+. . . .+..+.|+|++ +++++..++ ...+|.+.++ ....+..+ ..+..+ + ++++.|
T Consensus 164 ~~~~l~-~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~-----~~~~l~~~-~~~~~~--s-pdg~~l 229 (347)
T 2gop_A 164 VIEEFE-K-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG-----KEEKMFEK-VSFYAV--D-SDGERI 229 (347)
T ss_dssp EEEEEE-E-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT-----EEEEEEEE-ESEEEE--E-ECSSCE
T ss_pred EEeeec-C-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCC-----ceEEeccC-cceeeE--C-CCCCEE
Confidence 756666 3 3 78999999998 666665442 3344443322 12333333 334433 6 677777
Q ss_pred EEEecC--------CcEEEEEcCCCceeEEeecccccccCCccCCCCCceee-ecccCCCCeEEEEEecCCceEEEEEec
Q 016457 231 WCLTHI--------ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD-CHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 231 ~~~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
+.++.+ ..|.+|| +++....... +...+.. +.|+ ++ ++++++.++.+++| +.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~------------~~~~~~~~~~~s-dg---~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 230 LLYGKPEKKYMSEHNKLYIYD--GKEVMGILDE------------VDRGVGQAKIKD-GK---VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEEECCSSSCCCSSCEEEEEC--SSCEEESSTT------------CCSEEEEEEEET-TE---EEEEEEETTEEEEE-EE
T ss_pred EEEEccccCCccccceEEEEC--CCceEecccc------------CCcccCCccEEc-Cc---EEEEEecCCcEEEE-Ec
Confidence 766644 3677887 4543322222 3466775 8898 65 56788889999999 88
Q ss_pred cCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeE-EEEecc
Q 016457 302 YGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRL-CCWLSD 359 (389)
Q Consensus 302 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v-~iW~~~ 359 (389)
+++. ..+. .+...|.++ +|++ .++++++.++.. .+|.++
T Consensus 291 ~g~~-------~~~~-~~~~~v~~~---------~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 291 DGEI-------KPIA-KGRHWIMGF---------DVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SSSE-------EEEE-CSSSEEEEE---------EESS--SEEEEEECSSSCCEEEEES
T ss_pred CCce-------EEEe-cCCCeEEee---------eeeC--cEEEEEcCCCChHHheEeC
Confidence 5443 4444 456778888 8888 566776666665 888876
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=2.4e-16 Score=135.93 Aligned_cols=258 Identities=6% Similarity=-0.044 Sum_probs=173.4
Q ss_pred ccCCCCeEEEEecCceeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCC
Q 016457 16 SCDNVNSIKRFGLKNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTP 94 (389)
Q Consensus 16 s~~~~~~i~~w~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 94 (389)
..+.++.++.| .......+.. ...+.+++|++++++++++..++.|.+||.++++.......+...+.++++++++
T Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-- 98 (333)
T 2dg1_A 22 PIISESELQTI-TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-- 98 (333)
T ss_dssp CCCCGGGSCEE-ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS--
T ss_pred EEeecccCccc-ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC--
Confidence 34667888888 4555555555 5677899999999977788888999999998887655444566789999999998
Q ss_pred CEEEEEecC----CeEEEEEccCCeEEEEEE--cCCCCeEEEEEeCCCCeEEEeec------CCeEEEEECcCCceeeee
Q 016457 95 HVLHSCSSD----GTIRAWDTRSFHEVWSVT--AGSQEIFCFSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACL 162 (389)
Q Consensus 95 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~ 162 (389)
+++++...+ +.|.+||..++.....+. .+...+.+++++|++..+++... .+.|..+|..+++... +
T Consensus 99 ~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~ 177 (333)
T 2dg1_A 99 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-I 177 (333)
T ss_dssp CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-E
T ss_pred cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-e
Confidence 677776666 689999998776553333 23457899999988765555442 2567777765544433 3
Q ss_pred eecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccce-e-eec--cCCceeeEEEecCCCcEEEEEecCCc
Q 016457 163 EESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLE-S-VIN--VGTSVGKVGFFGETNKHLWCLTHIET 238 (389)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~-~~~--~~~~i~~~~~~~~~~~~l~~~~~d~~ 238 (389)
. .....+..++|+|++..++++.+.++.|.+||+.+......... . ... ....+..+++. +++.++++...++.
T Consensus 178 ~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d-~~G~l~v~~~~~~~ 255 (333)
T 2dg1_A 178 I-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID-SDDNLYVAMYGQGR 255 (333)
T ss_dssp E-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB-TTCCEEEEEETTTE
T ss_pred e-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC-CCCCEEEEEcCCCE
Confidence 2 23445789999999852445555678999999963211111000 0 111 11367789998 67777777777889
Q ss_pred EEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEE
Q 016457 239 LSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 239 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 286 (389)
|.+||. +++.+..+...... .+|...+.+++|+|+++.+|+
T Consensus 256 v~~~d~-~g~~~~~~~~~~~~------~g~~~~~~~~~~~~dg~~L~v 296 (333)
T 2dg1_A 256 VLVFNK-RGYPIGQILIPGRD------EGHMLRSTHPQFIPGTNQLII 296 (333)
T ss_dssp EEEECT-TSCEEEEEECTTGG------GTCSCBCCEEEECTTSCEEEE
T ss_pred EEEECC-CCCEEEEEEcCCCc------cccccCcceEEECCCCCEEEE
Confidence 999998 46666666532100 001226788999999875443
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=3.4e-16 Score=143.04 Aligned_cols=287 Identities=13% Similarity=0.067 Sum_probs=202.8
Q ss_pred CCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc--CCeEEEEEEcCCC
Q 016457 48 NDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR--SFHEVWSVTAGSQ 125 (389)
Q Consensus 48 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~ 125 (389)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+|++ +++++++.|+.|.+||+. +++.+..+... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDG--r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~ 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASG--RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-S 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTS--CEEEEEETTSEEEEEETTSSSCCEEEEEECC-S
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCC--CEEEEEcCCCeEEEEECCCCCCcEeEEEecC-C
Confidence 4455666667789999999999999988874 3457799999999 799999999999999996 88888888864 4
Q ss_pred CeEEEEEe----CCCCeEEEeec-CCeEEEEECcCCceeeeeeec---------ccC-CeeEEEEecCCCCeEEEEeCCC
Q 016457 126 EIFCFSFG----GSTDYLLAAGC-GSQIQFWDWRNKKQVACLEES---------HVE-DVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 126 ~v~~~~~~----~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~---------~~~-~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
....++|+ |++++++++.. ++.|.++|..+.+.+..+... |.. .+..+..+++++.+++....+|
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 57899999 69999998887 799999999999988776511 112 5788999998775666677789
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe-cCCcEEEEEcCCCceeEEeec-ccccccCCccCCC
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT-HIETLSIWDWKDGQNVASFEN-ARSLASDSWTLDD 268 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~ 268 (389)
.|.++|..... ...............+.|+ +++++++++. .++.|.++|+.+++.+..+.. ... .|
T Consensus 321 ~v~~vd~~~~~---~~~v~~i~~~~~~~d~~~~-pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~--------Ph 388 (567)
T 1qks_A 321 KILLVDYTDLN---NLKTTEISAERFLHDGGLD-GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT--------PH 388 (567)
T ss_dssp EEEEEETTCSS---EEEEEEEECCSSEEEEEEC-TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS--------BC
T ss_pred eEEEEecCCCc---cceeeeeeccccccCceEC-CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC--------CC
Confidence 99999998432 1112222344566788899 6777766555 578999999999988777654 221 13
Q ss_pred CCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc-cccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEe
Q 016457 269 VDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA-ATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTG 347 (389)
Q Consensus 269 ~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~ 347 (389)
...-..+ ++|++..+|+.+...++.|.++|..+.+. ...++.+..+. ... .+.+.+.++|++++|+..
T Consensus 389 pg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~-~~g---------~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 389 PGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFP-ALG---------GGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-CSC---------SCCCCEECCTTCSEEEEE
T ss_pred Cccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEe-cCC---------CCCEEEEeCCCCCeEEEe
Confidence 3222222 57876654433334568999999987432 00112234433 111 122223779999998886
Q ss_pred cC-------CCeEEEEeccCC
Q 016457 348 GE-------DGRLCCWLSDDS 361 (389)
Q Consensus 348 ~~-------dg~v~iW~~~~~ 361 (389)
.. ...|.++|+++.
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGC
T ss_pred cCCCCCcccCceEEEEECCcc
Confidence 52 459999999866
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=2.3e-16 Score=149.96 Aligned_cols=244 Identities=9% Similarity=0.030 Sum_probs=174.6
Q ss_pred ceEEEeecCCCCeEEEEecCC-----eEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCe---------
Q 016457 40 YVFEIVPKNDWSLMAVSLSTN-----VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT--------- 105 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~--------- 105 (389)
.+..++|||||++||.+..++ .|++||+.+++.......+ ..+..++|+|++ +.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg--~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDG--KGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTS--SEEEEEECCCCSSCCSSSCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCC--CEEEEEEECCcccccccccc
Confidence 588999999999999887644 8999999999876543322 236789999999 68888887765
Q ss_pred -------EEEEEccCCeE--EEEEEc--CCCCeEEEEEeCCCCeEEEeec-----CCeEEEEECcC------Cc-eeeee
Q 016457 106 -------IRAWDTRSFHE--VWSVTA--GSQEIFCFSFGGSTDYLLAAGC-----GSQIQFWDWRN------KK-QVACL 162 (389)
Q Consensus 106 -------i~iwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~------~~-~~~~~ 162 (389)
|.+|++.+++. ...+.. +...+..+.|+|++++|+.++. +..|++||+.+ +. ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 99999987652 223333 3455789999999999888765 56899999987 43 35555
Q ss_pred eecccCCeeEEEEecCCCCeEEEEeCC----CcEEEEecCCCCCCCccceeeeccCC--ceeeEEEecCCCcEEEEEecC
Q 016457 163 EESHVEDVTQVHFVPNNQNKVVSASVD----GLICTFDTGGDINDDDLLESVINVGT--SVGKVGFFGETNKHLWCLTHI 236 (389)
Q Consensus 163 ~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~~~~~d 236 (389)
. .+...+.. .|+|+|. .|+..+.. +.|.+||+.++. ......+..+.. .+..++|+ +++.++++...+
T Consensus 283 ~-~~~~~~~~-~~s~dg~-~l~~~s~~~~~~~~l~~~d~~~~~--~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~ 356 (710)
T 2xdw_A 283 I-DNFEGEYD-YVTNEGT-VFTFKTNRHSPNYRLINIDFTDPE--ESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD 356 (710)
T ss_dssp E-CSSSSCEE-EEEEETT-EEEEEECTTCTTCEEEEEETTSCC--GGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET
T ss_pred e-CCCCcEEE-EEeccCC-EEEEEECCCCCCCEEEEEeCCCCC--cccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC
Confidence 5 45555554 5888886 65555443 369999998542 112344444433 67788998 677788888888
Q ss_pred C--cEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec--CCceEEEEEeccCC
Q 016457 237 E--TLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT--GAGTVGYFPVNYGG 304 (389)
Q Consensus 237 ~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~--~dg~i~i~~~~~~~ 304 (389)
+ .|.+|++.+++.+..+.. +...+..+.++|+++.+++...+ ..+.|+.||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~------------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPL------------EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECC------------CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCC------------CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8 466778767877666654 34778889999998755443333 34789999998876
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=3.1e-16 Score=136.05 Aligned_cols=239 Identities=12% Similarity=0.049 Sum_probs=160.2
Q ss_pred CCCeEEEEecCc-eeeeeecCcceEEEeecCCCCeEEEEecC---C--eEEEEeCCCceeeeeecCCCCcEEEEEEeCCC
Q 016457 19 NVNSIKRFGLKN-SIQTNFGDDYVFEIVPKNDWSLMAVSLST---N--VVKLYSPVTGQYSGECKGHSSTVNQISFSGPS 92 (389)
Q Consensus 19 ~~~~i~~w~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~ 92 (389)
.++.|.+|++.. ....+ ..+..++|+|||+.||.++.+ + .|.+|++.+++.......+ . +..++|+|++
T Consensus 41 ~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg 115 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDS 115 (347)
T ss_dssp EEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTS
T ss_pred ccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCC
Confidence 356788888753 23333 567889999999999988754 3 4888888888766555433 3 9999999999
Q ss_pred CCCEEEEEecC---------------------------CeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC
Q 016457 93 TPHVLHSCSSD---------------------------GTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG 145 (389)
Q Consensus 93 ~~~~l~s~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 145 (389)
+.|+.++.+ ..|.+||+.+++.+..+.. . .+..++|+|++ .++++..+
T Consensus 116 --~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 116 --RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp --SEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred --CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 677776632 5799999998887455554 3 78899999988 66655443
Q ss_pred ------C-eEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC--------CcEEEEecCCCCCCCccceee
Q 016457 146 ------S-QIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD--------GLICTFDTGGDINDDDLLESV 210 (389)
Q Consensus 146 ------~-~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~~~~~~ 210 (389)
. ...+|.+.+++ ...+. .+ ..+..+ +|+|+ .|+.++.+ ..|.+|| . +. ...+
T Consensus 191 ~~~~~~~~~~~l~~~d~~~-~~~l~-~~-~~~~~~--spdg~-~l~~~~~~~~~~~~~~~~l~~~d-~-~~-----~~~l 257 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWEDGK-EEKMF-EK-VSFYAV--DSDGE-RILLYGKPEKKYMSEHNKLYIYD-G-KE-----VMGI 257 (347)
T ss_dssp CSSCCSSCCEEEEEEETTE-EEEEE-EE-ESEEEE--EECSS-CEEEEECCSSSCCCSSCEEEEEC-S-SC-----EEES
T ss_pred cccccccccccEEEeCCCc-eEEec-cC-cceeeE--CCCCC-EEEEEEccccCCccccceEEEEC-C-Cc-----eEec
Confidence 2 34555444444 44444 34 445544 99996 67666543 4688888 3 21 2222
Q ss_pred -eccCCceee-EEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEE
Q 016457 211 -INVGTSVGK-VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIG 288 (389)
Q Consensus 211 -~~~~~~i~~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 288 (389)
..+...+.. +.|+ ++ ++++++.++.+++| +.+++....+. +...+.+++|+| . ++++
T Consensus 258 ~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~~~~~-------------~~~~v~~~~~s~--~--~~~~ 316 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIKPIAK-------------GRHWIMGFDVDE--I--VVYL 316 (347)
T ss_dssp STTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEEEEEC-------------SSSEEEEEEESS--S--EEEE
T ss_pred cccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceEEEec-------------CCCeEEeeeeeC--c--EEEE
Confidence 234566775 7886 55 88899999999999 87655433322 346788999998 4 5666
Q ss_pred ecCCceE-EEEEec
Q 016457 289 GTGAGTV-GYFPVN 301 (389)
Q Consensus 289 g~~dg~i-~i~~~~ 301 (389)
++.++.. .+|.+.
T Consensus 317 ~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 317 KETATRLRELFTWD 330 (347)
T ss_dssp EECSSSCCEEEEES
T ss_pred EcCCCChHHheEeC
Confidence 6666554 677665
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.78 E-value=5.5e-16 Score=133.14 Aligned_cols=259 Identities=13% Similarity=0.073 Sum_probs=180.4
Q ss_pred CCeEEEEeCCCceeeeeec------CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEE
Q 016457 59 TNVVKLYSPVTGQYSGECK------GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSF 132 (389)
Q Consensus 59 d~~i~iw~~~~~~~~~~~~------~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 132 (389)
++.|.++|.++++....+. ........+.+.. + .++++...++.|.+||..+++.+.++.. ......+++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~--~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~ 91 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-G--IGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-T--EEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-C--EEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEE
Confidence 7899999999998766542 1224467788753 3 4667777789999999999999988864 477899999
Q ss_pred eCCCCeEEEee-cCCeEEEEECcCCceeeeeeeccc----CCeeEEEEecCCCCeEEEEe-CCCcEEEEecCCCCCCCcc
Q 016457 133 GGSTDYLLAAG-CGSQIQFWDWRNKKQVACLEESHV----EDVTQVHFVPNNQNKVVSAS-VDGLICTFDTGGDINDDDL 206 (389)
Q Consensus 133 ~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~ 206 (389)
++++ .++++. .++.|.+||+.+++....+..+.. .....|++ ..+ .++++.. .++.|.++|+.++. .
T Consensus 92 ~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~----~ 164 (328)
T 3dsm_A 92 LSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDK----V 164 (328)
T ss_dssp EETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTE----E
T ss_pred eCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCe----E
Confidence 8776 677776 689999999999988877762210 14567777 333 2444443 48899999998652 2
Q ss_pred ceeeeccCCceeeEEEecCCCcEEEEEecC----------CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeec
Q 016457 207 LESVINVGTSVGKVGFFGETNKHLWCLTHI----------ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCH 276 (389)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 276 (389)
...+ ........++++ +++++++++..+ +.|.++|..+++....+... .......++
T Consensus 165 ~~~i-~~g~~p~~i~~~-~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-----------~g~~p~~la 231 (328)
T 3dsm_A 165 VDEL-TIGIQPTSLVMD-KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-----------LGDWPSEVQ 231 (328)
T ss_dssp EEEE-ECSSCBCCCEEC-TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-----------TTCCCEEEE
T ss_pred EEEE-EcCCCccceEEc-CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-----------CCCCceeEE
Confidence 2232 234456788888 677766666554 78999999998877666531 113578999
Q ss_pred ccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCC-CceeEEEe----cCCC
Q 016457 277 YPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQS-HGIFGWTG----GEDG 351 (389)
Q Consensus 277 ~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~-~~~~l~s~----~~dg 351 (389)
++|+++.+| .... .|.+||..+++.... ..+. .+......+ +++| ++.++++. ..++
T Consensus 232 ~~~d~~~ly--v~~~--~v~~~d~~t~~~~~~----~~~~-~~~~~p~gi---------~vdp~~g~lyva~~~~y~~~~ 293 (328)
T 3dsm_A 232 LNGTRDTLY--WINN--DIWRMPVEADRVPVR----PFLE-FRDTKYYGL---------TVNPNNGEVYVADAIDYQQQG 293 (328)
T ss_dssp ECTTSCEEE--EESS--SEEEEETTCSSCCSS----CSBC-CCSSCEEEE---------EECTTTCCEEEEECTTSSSEE
T ss_pred EecCCCEEE--EEcc--EEEEEECCCCceeee----eeec-CCCCceEEE---------EEcCCCCeEEEEcccccccCC
Confidence 999998543 3333 899999988765110 1111 113345666 8998 55556665 6789
Q ss_pred eEEEEecc
Q 016457 352 RLCCWLSD 359 (389)
Q Consensus 352 ~v~iW~~~ 359 (389)
.|.+|+.+
T Consensus 294 ~V~v~d~~ 301 (328)
T 3dsm_A 294 IVYRYSPQ 301 (328)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
Confidence 99999987
No 184
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.78 E-value=7.5e-16 Score=132.30 Aligned_cols=289 Identities=13% Similarity=0.134 Sum_probs=197.5
Q ss_pred EEeecCCCCeEEEEec-----CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe----------cCCeEE
Q 016457 43 EIVPKNDWSLMAVSLS-----TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS----------SDGTIR 107 (389)
Q Consensus 43 ~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~----------~dg~i~ 107 (389)
.....|+++.+++... ++.|.++|..+++.+..+..-..+ . ++++|++ +++++++ .++.|.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG--~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDG--SFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTS--SCEEEEEEEEEETTEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCC--CEEEEEcccccccccCCCCCEEE
Confidence 3456789988888865 579999999999999888755555 4 9999999 5666554 367899
Q ss_pred EEEccCCeEEEEEEcCC-------CCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCCeeEEEEecC
Q 016457 108 AWDTRSFHEVWSVTAGS-------QEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN 178 (389)
Q Consensus 108 iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 178 (389)
+||..+.+.+..+.... .....++++|++++++++.. ++.|.++|+.+++.+.++.. .. |....|.
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v--~g---~~~~~P~ 187 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV--PD---CYHIFPT 187 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CS---EEEEEEE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC--CC---cceeecC
Confidence 99999999998887532 24667999999999999874 68999999999999998862 12 1223355
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCCCCccceeee-ccCCce-eeEEEecCCCcEEEEEecCCcEEEEEcCCCc--eeEEee
Q 016457 179 NQNKVVSASVDGLICTFDTGGDINDDDLLESVI-NVGTSV-GKVGFFGETNKHLWCLTHIETLSIWDWKDGQ--NVASFE 254 (389)
Q Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~ 254 (389)
+...+++.+.||.+.+.++.+............ ....++ ....|.++++++++ .+.+|.+++.|+.+.. ....+.
T Consensus 188 g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 188 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEE
T ss_pred CCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeeccee
Confidence 545788888999999999975211100000011 111222 23466656776555 5568999999997654 222222
Q ss_pred cccc-cccCCccCCCCCceeeecccCCCCeEEEEEec--------CCceEEEEEeccCCccccCCCeEEEecccceeeee
Q 016457 255 NARS-LASDSWTLDDVDYFVDCHYPGEGENLWVIGGT--------GAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRS 325 (389)
Q Consensus 255 ~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~--------~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 325 (389)
-... .....| .......++++++++++|++... ....|.++|..+++. +..+..++ .+..
T Consensus 267 ~~~~~~~~~g~---~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv------~~~i~vg~--~~~~ 335 (386)
T 3sjl_D 267 ALTEAERADGW---RPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER------LAKFEMGH--EIDS 335 (386)
T ss_dssp SSCHHHHHTTE---EECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE------EEEEEEEE--EECE
T ss_pred ccccccccccc---cCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE------EEEEECCC--Ccce
Confidence 0000 000011 11334457779999988877642 236799999999887 67776443 6778
Q ss_pred ccCCCcccCCCCCCCce-eEEE-ecCCCeEEEEeccCC
Q 016457 326 VLPMPSVQGRPAQSHGI-FGWT-GGEDGRLCCWLSDDS 361 (389)
Q Consensus 326 ~~~~~~~~~~~~s~~~~-~l~s-~~~dg~v~iW~~~~~ 361 (389)
+ ++++|++ +|++ ...++.|.++|....
T Consensus 336 l---------avs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 336 I---------NVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp E---------EECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred E---------EECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 8 9999996 5555 466999999999876
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.2e-14 Score=123.09 Aligned_cols=276 Identities=8% Similarity=-0.044 Sum_probs=187.1
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeee-ecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGE-CKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
...+.+++++++|+++++...++.|.+||.. ++.... ...+...+.++++.+++ .++++...++.|..||.. ++.
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDG--EVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECTT-SCE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCC--CEEEeCCCCCeEEEECCC-CcE
Confidence 4678999999999877766557899999988 554322 22345679999999988 577776668889999986 332
Q ss_pred EEEEE--cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEE
Q 016457 117 VWSVT--AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 117 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
..+. .....+.++++.+++..+++...++.|..||. +++............+..+++.+++. ++++...++.|..
T Consensus 90 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 90 -KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTENQNNAIGR 166 (299)
T ss_dssp -EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEE
T ss_pred -EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEeCCCCEEEE
Confidence 3333 23567899999977765555555789999998 55443222213445689999999984 7777767789999
Q ss_pred EecCCCCCCCcccee--eeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCce
Q 016457 195 FDTGGDINDDDLLES--VINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 195 ~d~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (389)
||. ++. +.. .......+..+++. +++.++++...++.|.+||. +++.. .+.... +...+
T Consensus 167 ~~~-~g~-----~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~----------~~~~~ 227 (299)
T 2z2n_A 167 ITE-SGD-----ITEFKIPTPASGPVGITKG-NDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT----------PNARP 227 (299)
T ss_dssp ECT-TCC-----EEEEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEE-EEECSS----------TTCCE
T ss_pred EcC-CCc-----EEEeeCCCCCCcceeEEEC-CCCCEEEEccCCceEEEECC-CCcEE-EEECCC----------CCCCc
Confidence 998 332 111 12234467889998 56776666666789999998 66543 232111 33568
Q ss_pred eeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe-cccceeeeeccCCCcccCCCCCCCceeEEEecCCC
Q 016457 273 VDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV-GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDG 351 (389)
Q Consensus 273 ~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg 351 (389)
..++++++|. +.++...++.|..|+. +++. ..+. ..+...+.++ ++ ++|.++++.+ .+
T Consensus 228 ~~i~~~~~g~--l~v~~~~~~~i~~~d~-~g~~-------~~~~~~~~~~~~~~i---------~~-~~g~l~v~~~-~~ 286 (299)
T 2z2n_A 228 HAITAGAGID--LWFTEWGANKIGRLTS-NNII-------EEYPIQIKSAEPHGI---------CF-DGETIWFAME-CD 286 (299)
T ss_dssp EEEEECSTTC--EEEEETTTTEEEEEET-TTEE-------EEEECSSSSCCEEEE---------EE-CSSCEEEEET-TT
T ss_pred eeEEECCCCC--EEEeccCCceEEEECC-CCce-------EEEeCCCCCCccceE---------Ee-cCCCEEEEec-CC
Confidence 8999999987 5556556788999998 3332 2221 2344567777 77 8888777766 45
Q ss_pred eEEEEeccC
Q 016457 352 RLCCWLSDD 360 (389)
Q Consensus 352 ~v~iW~~~~ 360 (389)
.|..++.+.
T Consensus 287 ~l~~~~~~~ 295 (299)
T 2z2n_A 287 KIGKLTLIK 295 (299)
T ss_dssp EEEEEEEC-
T ss_pred cEEEEEcCc
Confidence 666666543
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=7.3e-16 Score=146.53 Aligned_cols=279 Identities=10% Similarity=-0.017 Sum_probs=181.4
Q ss_pred cCCCCeEEEEecCC-----eEEEEeCCCceeeeee------cCCCCcEEEEEEeCCCCCCEEEEEecCC-----eEEEEE
Q 016457 47 KNDWSLMAVSLSTN-----VVKLYSPVTGQYSGEC------KGHSSTVNQISFSGPSTPHVLHSCSSDG-----TIRAWD 110 (389)
Q Consensus 47 ~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~~~l~s~~~dg-----~i~iwd 110 (389)
.|+|++++....++ .+.+.+...++....+ .+|...+..++|+|++ ++|+.+..++ .|++||
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg--~~la~~~~~~G~~~~~i~v~d 157 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDG--EYFAYGLSASGSDWVTIKFMK 157 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTS--SEEEEEEEETTCSCEEEEEEE
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCC--CEEEEEEcCCCCceEEEEEEE
Confidence 38888877665432 4455555444432221 2344568899999999 6787665443 899999
Q ss_pred ccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCe----------------EEEEECcCCcee--eeeee-cccCCee
Q 016457 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ----------------IQFWDWRNKKQV--ACLEE-SHVEDVT 171 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------------i~iwd~~~~~~~--~~~~~-~~~~~v~ 171 (389)
+.+++.+.....+ ..+..++|+|+++.|+.++.++. |++|++.+++.. ..+.. .+...+.
T Consensus 158 ~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~ 236 (710)
T 2xdw_A 158 VDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG 236 (710)
T ss_dssp TTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE
T ss_pred CCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE
Confidence 9999877643322 23678999999999999887655 999999887632 22221 2455678
Q ss_pred EEEEecCCCCeEEEEeC-----CCcEEEEecCC------CCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC----
Q 016457 172 QVHFVPNNQNKVVSASV-----DGLICTFDTGG------DINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI---- 236 (389)
Q Consensus 172 ~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---- 236 (389)
.+.|+|+|+ +|+.++. +..|++||+.+ +. .....+..+...+.. .|+ +++..|+..+..
T Consensus 237 ~~~~SpDg~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~s-~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 237 GAELSDDGR-YVLLSIREGCDPVNRLWYCDLQQESNGITGI---LKWVKLIDNFEGEYD-YVT-NEGTVFTFKTNRHSPN 310 (710)
T ss_dssp EEEECTTSC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSS---CCCEEEECSSSSCEE-EEE-EETTEEEEEECTTCTT
T ss_pred EEEEcCCCC-EEEEEEEccCCCccEEEEEECcccccccCCc---cceEEeeCCCCcEEE-EEe-ccCCEEEEEECCCCCC
Confidence 999999997 7766654 56899999975 21 124445555555544 466 455555555443
Q ss_pred CcEEEEEcCCCc--eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCce--EEEEEeccCCccccCCCe
Q 016457 237 ETLSIWDWKDGQ--NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGT--VGYFPVNYGGAATIGPPE 312 (389)
Q Consensus 237 ~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~--i~i~~~~~~~~~~~~~~~ 312 (389)
..|.+||+.++. ....+..+. ....+..+.|++++. ++++...++. |++|++.+++. +
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~--lv~~~~~~g~~~l~~~~~~~g~~------~ 372 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVPEH----------EKDVLEWVACVRSNF--LVLCYLHDVKNTLQLHDLATGAL------L 372 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEECCC----------SSCEEEEEEEETTTE--EEEEEEETTEEEEEEEETTTCCE------E
T ss_pred CEEEEEeCCCCCcccceeccCCC----------CCCeEEEEEEEcCCE--EEEEEEECCEEEEEEEECCCCCE------E
Confidence 369999998764 234444321 113577888886555 6777777875 55566645543 3
Q ss_pred EEEecccceeeeeccCCCcccCCCCCCCceeEE-E---ecCCCeEEEEeccCCc
Q 016457 313 AVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGW-T---GGEDGRLCCWLSDDSS 362 (389)
Q Consensus 313 ~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~-s---~~~dg~v~iW~~~~~~ 362 (389)
..+. .+...|..+ +++|++..|+ + ....+.|.+|++....
T Consensus 373 ~~l~-~~~~~v~~~---------~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 373 KIFP-LEVGSVVGY---------SGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEC-CCSSEEEEE---------ECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EecC-CCCceEEEE---------ecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5554 566777788 8888886555 2 2356789999987543
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=1.3e-16 Score=151.37 Aligned_cols=275 Identities=6% Similarity=-0.056 Sum_probs=178.5
Q ss_pred ecCCCCeEEEEecCC-----eEEEEeCCCceeeeee------cCCCCcEEEEEEeCCCCCCEEE-----EEecCCeEEEE
Q 016457 46 PKNDWSLMAVSLSTN-----VVKLYSPVTGQYSGEC------KGHSSTVNQISFSGPSTPHVLH-----SCSSDGTIRAW 109 (389)
Q Consensus 46 ~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~------~~~~~~v~~i~~~~~~~~~~l~-----s~~~dg~i~iw 109 (389)
.+|+|++++....++ .|.+.+...++....+ .+|...+..++|+|++ ++|+ .|+.+..|++|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG--~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDG--KKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTS--SEEEEEEEETTCSCCEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCC--CEEEEEECCCCCceEEEEEE
Confidence 457898888776643 3444454444433222 2455679999999999 6777 34445689999
Q ss_pred EccCCeEE-EEEEcCCCCeEEEEEeCCCCeEEEeecCCe-------------EEEEECcCCce----eeeeeecccCCee
Q 016457 110 DTRSFHEV-WSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ-------------IQFWDWRNKKQ----VACLEESHVEDVT 171 (389)
Q Consensus 110 d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~iwd~~~~~~----~~~~~~~~~~~v~ 171 (389)
|+.+++.+ .. .........++|+|++..|+.++.+.. |++|++.++.. +.... .+...+.
T Consensus 153 dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~-~~~~~~~ 230 (695)
T 2bkl_A 153 DVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERT-GDPTTFL 230 (695)
T ss_dssp ETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCC-CCTTCEE
T ss_pred ECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecC-CCCEEEE
Confidence 99998864 21 111112268999999999999888665 99999988762 22222 3456788
Q ss_pred EEEEecCCCCeEEEEeCCC----cEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe---cCCcEEEEEc
Q 016457 172 QVHFVPNNQNKVVSASVDG----LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT---HIETLSIWDW 244 (389)
Q Consensus 172 ~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---~d~~i~i~d~ 244 (389)
.+.|+|+|+ +|+.++.++ .|.++|..++ ....+..+...+....+. ++ .+++.+. .++.|.+||+
T Consensus 231 ~~~~SpDG~-~l~~~~~~~~~~~~l~~~~~~~~-----~~~~l~~~~~~~~~~~~~-~g-~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 231 QSDLSRDGK-YLFVYILRGWSENDVYWKRPGEK-----DFRLLVKGVGAKYEVHAW-KD-RFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp EEEECTTSC-CEEEEEEETTTEEEEEEECTTCS-----SCEEEEECSSCCEEEEEE-TT-EEEEEECTTCTTCEEEEEBT
T ss_pred EEEECCCCC-EEEEEEeCCCCceEEEEEcCCCC-----ceEEeecCCCceEEEEec-CC-cEEEEECCCCCCCEEEEEeC
Confidence 999999997 666666555 5677765432 244455555556666663 44 4444444 2578999999
Q ss_pred CCCce--eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc-CCccccCCCeEEEeccc-c
Q 016457 245 KDGQN--VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY-GGAATIGPPEAVLVGGH-T 320 (389)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~-~~~~~~~~~~~~~~~~h-~ 320 (389)
.++.. ...+..+. ....+..++++ ++. ++++...|+..++|.+.. ++. +..+. .+ .
T Consensus 303 ~~~~~~~~~~l~~~~----------~~~~l~~~~~~-~~~--lv~~~~~dg~~~l~~~~~~g~~------~~~l~-~~~~ 362 (695)
T 2bkl_A 303 AKPARASWKEIVPED----------SSASLLSVSIV-GGH--LSLEYLKDATSEVRVATLKGKP------VRTVQ-LPGV 362 (695)
T ss_dssp TBCSGGGCEEEECCC----------SSCEEEEEEEE-TTE--EEEEEEETTEEEEEEEETTCCE------EEECC-CSSS
T ss_pred CCCCccCCeEEecCC----------CCCeEEEEEEE-CCE--EEEEEEECCEEEEEEEeCCCCe------eEEec-CCCC
Confidence 87653 23333211 13457778887 444 678888899888887662 322 23343 33 4
Q ss_pred eeeeeccCCCcccCCCCCCCceeEE----EecCCCeEEEEeccCC
Q 016457 321 AVVRSVLPMPSVQGRPAQSHGIFGW----TGGEDGRLCCWLSDDS 361 (389)
Q Consensus 321 ~~v~~~~~~~~~~~~~~s~~~~~l~----s~~~dg~v~iW~~~~~ 361 (389)
..|..+ ++++++..|+ +....+.|++|++...
T Consensus 363 ~~v~~~---------~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 363 GAASNL---------MGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp SEECCC---------BSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred eEEEEe---------ecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 566666 8899987766 4456688999998765
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=2.4e-16 Score=149.40 Aligned_cols=242 Identities=12% Similarity=-0.001 Sum_probs=166.7
Q ss_pred ceEEEeecCCCCeEEEEe-----cCCeEEEEeCCCceee-eeecCCCCcE--EEEEEeCCCCCCEEEEEecCCe------
Q 016457 40 YVFEIVPKNDWSLMAVSL-----STNVVKLYSPVTGQYS-GECKGHSSTV--NQISFSGPSTPHVLHSCSSDGT------ 105 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~-----~d~~i~iw~~~~~~~~-~~~~~~~~~v--~~i~~~~~~~~~~l~s~~~dg~------ 105 (389)
.+.+++|||||++||.+. .+..|++||+.+++.+ .. +...+ ..++|+|++ +.|+.++.|..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---~~~~~~~~~~~wspDg--~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---VIEGGKYATPKWTPDS--KGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---CBSCCTTCCCEECTTS--SEEEEEECCCCTTSCGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---ccCcccccceEEecCC--CEEEEEEecCCCCCccc
Confidence 688999999999999543 3468999999998865 21 11222 679999999 78988888776
Q ss_pred -------EEEEEccCCe----EEEEEEcCCCCeEEEEEeCCCCeEEEeecCC----eEEEEECcCCceeeeeeecccCCe
Q 016457 106 -------IRAWDTRSFH----EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS----QIQFWDWRNKKQVACLEESHVEDV 170 (389)
Q Consensus 106 -------i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~iwd~~~~~~~~~~~~~~~~~v 170 (389)
|++|++.++. .+.....+...+.++.|+|++++++.++.++ .|.+||..+++ ...+. .+...+
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~-~~~~~~ 274 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLV-KGVGAK 274 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEE-ECSSCC
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEee-cCCCce
Confidence 9999998775 3322233446789999999999998887755 67777765554 34444 355556
Q ss_pred eEEEEecCCCCeEEEEe---CCCcEEEEecCCCCCCCccceeeecc--CCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 171 TQVHFVPNNQNKVVSAS---VDGLICTFDTGGDINDDDLLESVINV--GTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 171 ~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
....+ +++. +++.+. .++.|.+||+.++. ......+..+ ...+..++++ ++.++++...|+..++|.+.
T Consensus 275 ~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~--~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 275 YEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPA--RASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCS--GGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCC--ccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 66666 6675 555554 25789999997542 1112333333 4457788887 56788888899987777654
Q ss_pred -CCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe--cCCceEEEEEeccCCc
Q 016457 246 -DGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG--TGAGTVGYFPVNYGGA 305 (389)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g--~~dg~i~i~~~~~~~~ 305 (389)
+++....+... ....+..+.++|+++.+++... ...+.|++||+.+++.
T Consensus 349 ~~g~~~~~l~~~-----------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 349 LKGKPVRTVQLP-----------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TTCCEEEECCCS-----------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CCCCeeEEecCC-----------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 35555554421 2467888999999885443332 2357899999988764
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=1.7e-15 Score=130.14 Aligned_cols=261 Identities=10% Similarity=-0.006 Sum_probs=183.2
Q ss_pred cCCCCeEEEEecCc--eeeeee------c-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEE
Q 016457 17 CDNVNSIKRFGLKN--SIQTNF------G-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQIS 87 (389)
Q Consensus 17 ~~~~~~i~~w~~~~--~~~~~~------~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~ 87 (389)
++.+++|.++|..+ ....+. . ......+++.. +++.++...++.|.+||..+++.+..+. .......++
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~ 90 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIH 90 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEE
T ss_pred CCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEE
Confidence 34588999999863 222221 1 34467777753 4455555567999999999999988885 346788999
Q ss_pred EeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCC-----CCeEEEEEeCCCCeEEEee--cCCeEEEEECcCCceee
Q 016457 88 FSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGS-----QEIFCFSFGGSTDYLLAAG--CGSQIQFWDWRNKKQVA 160 (389)
Q Consensus 88 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~i~iwd~~~~~~~~ 160 (389)
+++++ .++++...++.|.+||+.+++....+.... .....+++ .++.++++. .++.|.++|+.+++.+.
T Consensus 91 ~~~~g--~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 91 FLSDE--KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEETT--EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EeCCC--eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 98887 455555488999999999999888887643 15567777 466777766 37899999999998888
Q ss_pred eeeecccCCeeEEEEecCCCCeEEEEeCC----------CcEEEEecCCCCCCCccceeeec-cCCceeeEEEecCCCcE
Q 016457 161 CLEESHVEDVTQVHFVPNNQNKVVSASVD----------GLICTFDTGGDINDDDLLESVIN-VGTSVGKVGFFGETNKH 229 (389)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 229 (389)
++. .......++++|+++ +++++..+ +.|.++|..++. ....+.. .......++++ ++++.
T Consensus 167 ~i~--~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----v~~~~~~~~g~~p~~la~~-~d~~~ 238 (328)
T 3dsm_A 167 ELT--IGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT----VEKQFKFKLGDWPSEVQLN-GTRDT 238 (328)
T ss_dssp EEE--CSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE----EEEEEECCTTCCCEEEEEC-TTSCE
T ss_pred EEE--cCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCe----EEEEEecCCCCCceeEEEe-cCCCE
Confidence 876 234567899999985 66665544 789999998542 2222221 13468899999 56677
Q ss_pred EEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe----cCCceEEEEEeccCCc
Q 016457 230 LWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG----TGAGTVGYFPVNYGGA 305 (389)
Q Consensus 230 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g----~~dg~i~i~~~~~~~~ 305 (389)
|+++.. .|.+||..+++........ ........++++|++..+| ++. ..++.|.+||.. ++.
T Consensus 239 lyv~~~--~v~~~d~~t~~~~~~~~~~----------~~~~~p~gi~vdp~~g~ly-va~~~~y~~~~~V~v~d~~-g~~ 304 (328)
T 3dsm_A 239 LYWINN--DIWRMPVEADRVPVRPFLE----------FRDTKYYGLTVNPNNGEVY-VADAIDYQQQGIVYRYSPQ-GKL 304 (328)
T ss_dssp EEEESS--SEEEEETTCSSCCSSCSBC----------CCSSCEEEEEECTTTCCEE-EEECTTSSSEEEEEEECTT-CCE
T ss_pred EEEEcc--EEEEEECCCCceeeeeeec----------CCCCceEEEEEcCCCCeEE-EEcccccccCCEEEEECCC-CCE
Confidence 777654 8999999887653110000 0125678899999666544 454 578999999998 655
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=1.8e-15 Score=128.15 Aligned_cols=234 Identities=8% Similarity=0.014 Sum_probs=164.0
Q ss_pred eeeeecCCCCcEEEEEEeCCCCCC-EEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEE
Q 016457 72 YSGECKGHSSTVNQISFSGPSTPH-VLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQF 150 (389)
Q Consensus 72 ~~~~~~~~~~~v~~i~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 150 (389)
.+..+..+.....+++|+|++ + +++++..++.|..|+..++ ...+..+...+.+++++|++..+++...++.|.+
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g--~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~ 94 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPAR--SAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLER 94 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGG--TEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEE
T ss_pred cEEEEecCCccccCCeEeCCC--CEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEE
Confidence 344455566678899999998 5 7888888999999999877 6677777788999999988776555555789999
Q ss_pred EECcCCceeeeeee---cccCCeeEEEEecCCCCeEEEE----e-------------CCCcEEEEecCCCCCCCccceee
Q 016457 151 WDWRNKKQVACLEE---SHVEDVTQVHFVPNNQNKVVSA----S-------------VDGLICTFDTGGDINDDDLLESV 210 (389)
Q Consensus 151 wd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~ 210 (389)
||..+++....... .....+..++++|+|. ++++. + ..+.|..++.. + .+...
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g-----~~~~~ 167 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G-----TLSAP 167 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-----CEEEE
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C-----CEEEe
Confidence 99987765433221 1123467899999995 77763 2 13456666654 2 23334
Q ss_pred eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcC-CCce---eEEeecccccccCCccCCCCCceeeecccCCCCeEEE
Q 016457 211 INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK-DGQN---VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 211 ~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 286 (389)
.........++|+ ++++.+++.+.++.|.+|++. +++. ...+ .. +...+..++++++|+ +.
T Consensus 168 ~~~~~~~~gi~~s-~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-----------~~~~p~~i~~d~~G~--l~ 232 (296)
T 3e5z_A 168 IRDRVKPNGLAFL-PSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TV-----------EPGKTDGLRVDAGGL--IW 232 (296)
T ss_dssp ECCCSSEEEEEEC-TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-----------SSSCCCSEEEBTTSC--EE
T ss_pred ecCCCCCccEEEC-CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-----------CCCCCCeEEECCCCC--EE
Confidence 4455667899999 677777777778999999987 4544 2233 11 335567899999997 44
Q ss_pred EEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCC-CCCceeEEEecCCC
Q 016457 287 IGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPA-QSHGIFGWTGGEDG 351 (389)
Q Consensus 287 ~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~-s~~~~~l~s~~~dg 351 (389)
++. ++.|.+|+.. ++. +..+. .+.. +.++ +| +++++.|+.++.++
T Consensus 233 v~~--~~~v~~~~~~-g~~------~~~~~-~~~~-~~~~---------~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD-GDE------LGRVL-TPQT-TSNL---------CFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EEE--TTEEEEECTT-SCE------EEEEE-CSSC-CCEE---------EEESTTSCEEEEEETTE
T ss_pred EEc--CCeEEEECCC-CCE------EEEEE-CCCC-ceeE---------EEECCCCCEEEEEcCCe
Confidence 444 7889999986 433 35554 4555 7777 88 68998888888764
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.76 E-value=1.5e-15 Score=128.69 Aligned_cols=239 Identities=8% Similarity=-0.081 Sum_probs=166.6
Q ss_pred CcceEEEeecCCCC-eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 38 DDYVFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+.++++++++ .++++...++.|.+||..+++.
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg--~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG--HLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC--CEEEEETTTTEEEEECSTTCCE
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC--cEEEEecCCCeEEEEcCCCCcE
Confidence 45567999999998 7888888999999999876 56666677889999999998 6777766678999999988775
Q ss_pred EEEEEcC----CCCeEEEEEeCCCCeEEE----ee-------------cCCeEEEEECcCCceeeeeeecccCCeeEEEE
Q 016457 117 VWSVTAG----SQEIFCFSFGGSTDYLLA----AG-------------CGSQIQFWDWRNKKQVACLEESHVEDVTQVHF 175 (389)
Q Consensus 117 ~~~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 175 (389)
....... ...+..++++|++..+++ +. ..+.|..+|.. ++ +..+. .+......++|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~-~~~~~~~gi~~ 179 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI-RDRVKPNGLAF 179 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE-CCCSSEEEEEE
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee-cCCCCCccEEE
Confidence 4433221 234678999988876665 22 13466666655 43 33343 45667789999
Q ss_pred ecCCCCeEEEEeCCCcEEEEecC-CCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 176 VPNNQNKVVSASVDGLICTFDTG-GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
+|++. .+++.+.++.|.+||+. .+. .......+......+..+++. +++.++++. ++.|.+||.. ++.+..+.
T Consensus 180 s~dg~-~lv~~~~~~~i~~~~~~~~g~-~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 180 LPSGN-LLVSDTGDNATHRYCLNARGE-TEYQGVHFTVEPGKTDGLRVD-AGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp CTTSC-EEEEETTTTEEEEEEECSSSC-EEEEEEEECCSSSCCCSEEEB-TTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred CCCCC-EEEEeCCCCeEEEEEECCCCc-CcCCCeEeeCCCCCCCeEEEC-CCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 99996 77777788999999997 221 000011112244566789998 677655544 7899999986 77777776
Q ss_pred cccccccCCccCCCCCceeeecc-cCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 255 NARSLASDSWTLDDVDYFVDCHY-PGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
. +.. +.+++| .|+++ .|+.++.+ .+.-++..+.++
T Consensus 254 ~------------~~~-~~~~~f~~~d~~--~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 254 T------------PQT-TSNLCFGGPEGR--TLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp C------------SSC-CCEEEEESTTSC--EEEEEETT-EEEEEECSCCBC
T ss_pred C------------CCC-ceeEEEECCCCC--EEEEEcCC-eEEEEEcccccc
Confidence 5 334 888999 58888 45555555 355666665544
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=2.4e-15 Score=125.41 Aligned_cols=219 Identities=12% Similarity=0.048 Sum_probs=167.1
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCCC-CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC-CCC
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHS-STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG-SQE 126 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~ 126 (389)
.+++|++++.++.|.+||.++|+.+..+..+. ..+.++.+.|++ ++++ +.++.|..||. +++.+..+..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG--~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG--EILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS--CEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC--CEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 35689999999999999999999999998766 478999999999 6777 34778999998 89999999975 357
Q ss_pred eEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeee-----cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCC
Q 016457 127 IFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEE-----SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGD 200 (389)
Q Consensus 127 v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 200 (389)
+.++.+.++++.+++.+. ++.|..+|. +++.+.++.. .+......+++.+++. ++++...++.|..||.. +
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEEEEECTT-S
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEEEEECCC-C
Confidence 889999999999888877 788888885 6777766641 1223455677889995 99999999999999998 4
Q ss_pred CCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCC
Q 016457 201 INDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGE 280 (389)
Q Consensus 201 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 280 (389)
+ .+..+. ....+..+... ++++++++++.++.|..+|..+++.+.++...... .. ....+..+...++
T Consensus 156 ~----~~w~~~-~~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~-~~-----~l~~~~~~~~~~~ 223 (276)
T 3no2_A 156 Q----LLNSVK-LSGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE-GV-----QLFFVAQLFPLQN 223 (276)
T ss_dssp C----EEEEEE-CSSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-SC-----CCSEEEEEEECTT
T ss_pred C----EEEEEE-CCCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-Cc-----cccccccceEcCC
Confidence 2 233333 23455667777 67888888888889999999999999888742100 00 1134677888888
Q ss_pred CCeEEEEEe
Q 016457 281 GENLWVIGG 289 (389)
Q Consensus 281 ~~~~~l~~g 289 (389)
|. ++++.
T Consensus 224 G~--i~v~~ 230 (276)
T 3no2_A 224 GG--LYICN 230 (276)
T ss_dssp SC--EEEEE
T ss_pred CC--EEEEe
Confidence 87 55554
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=2.8e-16 Score=138.75 Aligned_cols=269 Identities=7% Similarity=-0.098 Sum_probs=163.8
Q ss_pred CeEEEEecCc-eeeeeec-Ccc-eEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEE------------
Q 016457 21 NSIKRFGLKN-SIQTNFG-DDY-VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQ------------ 85 (389)
Q Consensus 21 ~~i~~w~~~~-~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~------------ 85 (389)
..|.+|++.. ....+.. ... ...+.|+|||+.|+.++.++.|++||+.+++.......+......
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 139 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKL 139 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcc
Confidence 3677777653 2333332 333 334789999999999999999999999988766555544443322
Q ss_pred -------EEEeCCCCCCEEEEE-----ecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeC-CCCeEEEeecC------C
Q 016457 86 -------ISFSGPSTPHVLHSC-----SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGG-STDYLLAAGCG------S 146 (389)
Q Consensus 86 -------i~~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~ 146 (389)
+.|+|++ +.++.+ ..+..|.+||+.+++...... +...+..+.|+| ++..++.++.+ .
T Consensus 140 ~~~~~~~~~~spdg--~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~ 216 (396)
T 3c5m_A 140 VGIEILKRDWQPLT--SWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDA 216 (396)
T ss_dssp EEEEEEGGGCCCCC--SHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESSCEEEEEEETTEEEEEEEEECSCSSSCSC
T ss_pred ccccccccccCCCC--cceeeeeeccCCCcceEEEEECCCCcEEeecc-CCcccccceECCCCCCEEEEEecCCCCCCCc
Confidence 3456666 455443 356689999999887665543 467899999999 67767666542 4
Q ss_pred eEEEEECcCCceeeeeeecc-cCCeeEEEEecCCCCeEEEEeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeE
Q 016457 147 QIQFWDWRNKKQVACLEESH-VEDVTQVHFVPNNQNKVVSASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKV 220 (389)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 220 (389)
.|.+||+..++.. .+.... ...+..++|+|+++ .|+.++.+ +.|++||+.++. ...+..... .. +
T Consensus 217 ~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~-----~~~l~~~~~-~~-~ 287 (396)
T 3c5m_A 217 RMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGS-AMAYVSYFKGQTDRVIYKANPETLE-----NEEVMVMPP-CS-H 287 (396)
T ss_dssp CCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSS-CEEEEEEETTTCCEEEEEECTTTCC-----EEEEEECCS-EE-E
T ss_pred eEEEEECCCCcee-EeeccCCCccccceEECCCCC-EEEEEecCCCCccceEEEEECCCCC-----eEEeeeCCC-CC-C
Confidence 6889998765433 333111 33578899999996 66665443 449999998652 122221221 23 8
Q ss_pred EEecCCCcEEEEEe----------------cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 221 GFFGETNKHLWCLT----------------HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 221 ~~~~~~~~~l~~~~----------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
.|+|++++++++++ .+..|++||+.+++.. .+....... ..+..........+.|+|+|+.+
T Consensus 288 ~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l 365 (396)
T 3c5m_A 288 LMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSW-DVLDGDRQITHPHPSFTPNDDGV 365 (396)
T ss_dssp EEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCC-CCBTTBSSTTCCCCEECTTSSEE
T ss_pred CccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcc-ccccccccCCCCCceEccCCCeE
Confidence 89843778777654 3468999999877643 333211000 00000000125667899999843
Q ss_pred EEEEecCCceEEEE--EeccCC
Q 016457 285 WVIGGTGAGTVGYF--PVNYGG 304 (389)
Q Consensus 285 ~l~~g~~dg~i~i~--~~~~~~ 304 (389)
++++..++...+| ++.++.
T Consensus 366 -~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 366 -LFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp -EEEECTTSSCEEEEEECCTTC
T ss_pred -EEEecCCCCceEEEEEEcccc
Confidence 2333345555555 444544
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=1e-15 Score=127.76 Aligned_cols=241 Identities=6% Similarity=-0.075 Sum_probs=163.8
Q ss_pred ceEEEeecCCCCeEE-EEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 40 YVFEIVPKNDWSLMA-VSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
...++++++++++++ +...++.|.+|+..++........+...+.++++.+++ .++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g--~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG--TVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTC--CEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCC--CEEEEcC-CCEEEEEeCCCceEe-
Confidence 678999999998666 43668899999976554332222344567889999988 5555555 889999998765433
Q ss_pred EEE-cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEec
Q 016457 119 SVT-AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDT 197 (389)
Q Consensus 119 ~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 197 (389)
.+. .....+.++++++++..+++...++.|.+|+..+........ .....+..+++++++. ++++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-TGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-CSCCSCCCEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-ccCCCceeEEEeCCCC-EEEEECCCCEEEEEec
Confidence 232 223678999999877655555557899999866544333222 2334678999999985 7777777889999998
Q ss_pred CCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecc
Q 016457 198 GGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHY 277 (389)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 277 (389)
.+.. ...........+..+++. +++.++++...++.|.+|+........ ... .+...+.++++
T Consensus 179 ~~~~----~~~~~~~~~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~-----------~~~~~p~~i~~ 241 (270)
T 1rwi_B 179 ESNN----QVVLPFTDITAPWGIAVD-EAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF-----------TGLNTPLAVAV 241 (270)
T ss_dssp TTCC----EEECCCSSCCSEEEEEEC-TTCCEEEEETTTSCEEEECTTCSCCEE-CCC-----------CSCSCEEEEEE
T ss_pred CCCc----eEeecccCCCCceEEEEC-CCCCEEEEECCCCcEEEEcCCCCccee-ecc-----------CCCCCceeEEE
Confidence 8532 111111222567889998 666666666678899999986543322 211 02256789999
Q ss_pred cCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 278 PGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 278 ~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+++|+ ++++...++.|++|+....+.
T Consensus 242 ~~~g~--l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 242 DSDRT--VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CTTCC--EEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCC--EEEEECCCCEEEEEcCCCccc
Confidence 99997 667888899999999886543
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=2.7e-15 Score=125.14 Aligned_cols=185 Identities=11% Similarity=0.094 Sum_probs=145.2
Q ss_pred CEEEEEecCCeEEEEEccCCeEEEEEEcCC-CCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEE
Q 016457 95 HVLHSCSSDGTIRAWDTRSFHEVWSVTAGS-QEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQV 173 (389)
Q Consensus 95 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~ 173 (389)
++|++++.|+.|.+||..+++.+.++..+. ..+.++.+.|+++.++ +.++.|..||. +++.+.++..+....+.++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccccc
Confidence 599999999999999999999999999875 4789999998887666 45788999998 8999998883223578899
Q ss_pred EEecCCCCeEEEEeC-CCcEEEEecCCCCCCCccceeee------ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 174 HFVPNNQNKVVSASV-DGLICTFDTGGDINDDDLLESVI------NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 174 ~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
.+.++|. .+++.+. ++.|..+|.... .+..+. .+......+++. ++++++++...++.|..||..
T Consensus 83 ~~~~dG~-~lv~~~~~~~~v~~vd~~Gk-----~l~~~~~~~~~~~~~~~~~~v~~~-~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 83 RILPDGN-ALVAWCGHPSTILEVNMKGE-----VLSKTEFETGIERPHAQFRQINKN-KKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EECTTSC-EEEEEESTTEEEEEECTTSC-----EEEEEEECCSCSSGGGSCSCCEEC-TTSCEEEEETTTTEEEEECTT-
T ss_pred EECCCCC-EEEEecCCCCEEEEEeCCCC-----EEEEEeccCCCCcccccccCceEC-CCCCEEEEecCCCEEEEECCC-
Confidence 9999995 8888776 777888876422 122221 122244566777 788899999999999999988
Q ss_pred CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 247 GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
++.+.++... ....++.+.++|+ ++++++.++.|..+|..+++.
T Consensus 155 G~~~w~~~~~-------------~~~~~~~~~~~g~--~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 GQLLNSVKLS-------------GTPFSSAFLDNGD--CLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEEECS-------------SCCCEEEECTTSC--EEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEEECC-------------CCccceeEcCCCC--EEEEeCCCCeEEEEeCcCCcE
Confidence 9998888752 3345567788888 788888888999999998876
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.75 E-value=1.8e-14 Score=125.39 Aligned_cols=287 Identities=11% Similarity=0.109 Sum_probs=189.8
Q ss_pred eecCCCCeEEEEec--CC---eEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe----------cCCeEEEE
Q 016457 45 VPKNDWSLMAVSLS--TN---VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS----------SDGTIRAW 109 (389)
Q Consensus 45 ~~~~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~----------~dg~i~iw 109 (389)
...|+++++++... .. .|.++|..+++.+..+.....+ .++++|++ +.++.+. .++.|.+|
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg--~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSG--SEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCC--CEEEEEeccccccccCCCCCeEEEE
Confidence 34577777777653 22 8899999999988887754444 89999999 6777765 36789999
Q ss_pred EccCCeEEEEEEcC-------CCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeee-eeecccCCeeEEEEecCC
Q 016457 110 DTRSFHEVWSVTAG-------SQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVAC-LEESHVEDVTQVHFVPNN 179 (389)
Q Consensus 110 d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~ 179 (389)
|..+.+.+..+... ......++++|++++++++.. ++.|.++| .+++.+.+ +. ... ++.+.|.+
T Consensus 103 D~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~--~~~---~~~~~~~~ 176 (373)
T 2mad_H 103 DPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS--SPT---CYHIHPGA 176 (373)
T ss_pred ECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC--CCc---eEEEEeCC
Confidence 99998888877643 123558999999999999875 57899999 99988877 65 222 35566777
Q ss_pred CCeEEEEeCCCcEEEEecCCCCCCCccc-eeeeccCCce-eeEEEecCCCcEEEEEecCCcEEEEEcCCCc--eeEEeec
Q 016457 180 QNKVVSASVDGLICTFDTGGDINDDDLL-ESVINVGTSV-GKVGFFGETNKHLWCLTHIETLSIWDWKDGQ--NVASFEN 255 (389)
Q Consensus 180 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~i-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~ 255 (389)
+..+++.+.||.+.++|. ++....... ........++ ....+.+.++.++++ +..+.+.+.|+.... .+..+..
T Consensus 177 ~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 177 PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeee
Confidence 667888889999999999 553110000 0000111121 234455334444444 467899999987552 2222221
Q ss_pred cccc-ccCCccCCCCCceeeecccCCCCeEEEEEec--------CCceEEEEEeccCCccccCCCeEEEecccceeeeec
Q 016457 256 ARSL-ASDSWTLDDVDYFVDCHYPGEGENLWVIGGT--------GAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSV 326 (389)
Q Consensus 256 ~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~--------~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 326 (389)
.... ....| .......+.++|+++++|++... .++.|.++|..+++. +..+..++ ....+
T Consensus 255 ~~~~~~~~~~---~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v------v~~i~~g~--~p~~i 323 (373)
T 2mad_H 255 LSGGRKADTW---RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT------SSQISLGH--DVDAI 323 (373)
T ss_pred cCCcccccce---ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE------EEEEECCC--CcCeE
Confidence 0000 00001 11234447789999977665431 246899999998776 56665333 45677
Q ss_pred cCCCcccCCCCCCCce-eEEEec-CCCeEEEEeccCCcc
Q 016457 327 LPMPSVQGRPAQSHGI-FGWTGG-EDGRLCCWLSDDSSE 363 (389)
Q Consensus 327 ~~~~~~~~~~~s~~~~-~l~s~~-~dg~v~iW~~~~~~~ 363 (389)
+|+|||+ .|+++. .++.|.++|+.....
T Consensus 324 ---------~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 324 ---------SVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred ---------EECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 9999999 788877 589999999987643
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.72 E-value=2.9e-15 Score=125.02 Aligned_cols=240 Identities=10% Similarity=-0.022 Sum_probs=162.7
Q ss_pred cEEEEEEeCCCCCCEEE-EEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceee
Q 016457 82 TVNQISFSGPSTPHVLH-SCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 160 (389)
...++++.+++ .+++ +...++.|.+|+..+.........+...+.++++++++. ++++..++.|.+||...... .
T Consensus 25 ~p~~i~~~~~g--~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~i~~~d~~~~~~-~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAG--NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQ-T 100 (270)
T ss_dssp CEEEEEECTTC--CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCC-E
T ss_pred CccceEECCCC--CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcCCCEEEEEeCCCceE-e
Confidence 67889999988 5666 446788999999765443221122235678899998776 55554488999999876543 2
Q ss_pred eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEE
Q 016457 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLS 240 (389)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~ 240 (389)
.+.......+..+++++++. ++++...++.|.+|+..+.. ...........+..+++. +++.++++...++.|.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~----~~~~~~~~~~~p~~i~~~-~~g~l~v~~~~~~~i~ 174 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKT----QTVLPFTGLNDPDGVAVD-NSGNVYVTDTDNNRVV 174 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCS----CEECCCCSCCSCCCEEEC-TTCCEEEEEGGGTEEE
T ss_pred eeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCce----eEeeccccCCCceeEEEe-CCCCEEEEECCCCEEE
Confidence 33212335689999999985 77777778899999765321 111111222467889998 5677666666788999
Q ss_pred EEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccc
Q 016457 241 IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHT 320 (389)
Q Consensus 241 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~ 320 (389)
+||............ +...+..++++++|. +.++...++.|.+|+...... ......+.
T Consensus 175 ~~~~~~~~~~~~~~~------------~~~~p~~i~~d~~g~--l~v~~~~~~~v~~~~~~~~~~-------~~~~~~~~ 233 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT------------DITAPWGIAVDEAGT--VYVTEHNTNQVVKLLAGSTTS-------TVLPFTGL 233 (270)
T ss_dssp EECTTTCCEEECCCS------------SCCSEEEEEECTTCC--EEEEETTTSCEEEECTTCSCC-------EECCCCSC
T ss_pred EEecCCCceEeeccc------------CCCCceEEEECCCCC--EEEEECCCCcEEEEcCCCCcc-------eeeccCCC
Confidence 999876654332211 225678899999985 556666788999999876443 22221233
Q ss_pred eeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 321 AVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 321 ~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..+.++ +++++|+++++...++.|+++++...
T Consensus 234 ~~p~~i---------~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 234 NTPLAV---------AVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCEEEE---------EECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceeE---------EECCCCCEEEEECCCCEEEEEcCCCc
Confidence 456677 89999998889889999999998764
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.71 E-value=2.5e-13 Score=114.96 Aligned_cols=276 Identities=8% Similarity=-0.055 Sum_probs=183.7
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee-eecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG-ECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
...+.++++.++|++.++...++.|.+||.. ++... .+..+...+.++++.+++ .++++...++.|..||.. ++.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLG--DIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECTT-SCE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCC--CEEEEecCCCeEEEECCC-CCe
Confidence 4678899999999877776668999999987 55433 223334678999999888 566666667889999987 554
Q ss_pred EEEEEc--CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEE
Q 016457 117 VWSVTA--GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 117 ~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
. .+.. ....+.++++.+++..+++...++.|..+|.. ++............+..+++.+++. ++++...++.|..
T Consensus 95 ~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 95 T-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSIGR 171 (300)
T ss_dssp E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEEEE
T ss_pred E-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeEEE
Confidence 3 3332 34678999999777655555557899999987 5544221112446789999999985 7776666788999
Q ss_pred EecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceee
Q 016457 195 FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 195 ~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
||.. +. .. ..........+..+++. +++.++++....+.|.+|+. +++.... .... +...+.+
T Consensus 172 ~~~~-g~--~~-~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~----------~~~~~~~ 234 (300)
T 2qc5_A 172 ITNT-GK--LE-EYPLPTNAAAPVGITSG-NDGALWFVEIMGNKIGRITT-TGEISEY-DIPT----------PNARPHA 234 (300)
T ss_dssp ECTT-CC--EE-EEECSSTTCCEEEEEEC-TTSSEEEEETTTTEEEEECT-TCCEEEE-ECSS----------TTCCEEE
T ss_pred ECCC-Cc--EE-EeeCCCCCCCcceEEEC-CCCCEEEEccCCCEEEEEcC-CCcEEEE-ECCC----------CCCCceE
Confidence 9984 21 01 11111233467889998 56776666666778999998 4544332 1110 2356788
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe-cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeE
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV-GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRL 353 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v 353 (389)
++++++|. +.++...++.|..|+. +++. ..+. ......+.++ +++++|.++++.. . .|
T Consensus 235 i~~d~~g~--l~v~~~~~~~i~~~~~-~g~~-------~~~~~~~~~~~~~~i---------~~~~~g~l~v~~~-~-~i 293 (300)
T 2qc5_A 235 ITAGKNSE--IWFTEWGANQIGRITN-DNTI-------QEYQLQTENAEPHGI---------TFGKDGSVWFALK-C-KI 293 (300)
T ss_dssp EEECSTTC--EEEEETTTTEEEEECT-TSCE-------EEEECCSTTCCCCCE---------EECTTSCEEEECS-S-EE
T ss_pred EEECCCCC--EEEeccCCCeEEEECC-CCcE-------EEEECCccCCcccee---------EeCCCCCEEEEcc-C-ce
Confidence 99999987 5556556788999998 3433 2221 1223445556 7888988766655 4 66
Q ss_pred EEEec
Q 016457 354 CCWLS 358 (389)
Q Consensus 354 ~iW~~ 358 (389)
..++.
T Consensus 294 ~~~~p 298 (300)
T 2qc5_A 294 GKLNL 298 (300)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 66654
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.69 E-value=6.7e-14 Score=120.24 Aligned_cols=261 Identities=15% Similarity=0.072 Sum_probs=177.7
Q ss_pred CCeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEe----------cCCeEEEEeCCCceeeeeecCC-------
Q 016457 20 VNSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSL----------STNVVKLYSPVTGQYSGECKGH------- 79 (389)
Q Consensus 20 ~~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~------- 79 (389)
++.|.+.|.. +.+.++.. ..+ . ++++|||++++++. .++.|.+||..+++.+..+.-.
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 5788888875 45555554 333 4 99999999988876 3678999999999988877422
Q ss_pred CCcEEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcC-C
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRN-K 156 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~ 156 (389)
...-..++|+|++ ++++.+.. ++.|.++|+.+++.+.++.... . ...+......+++.+.||.+.+.++.+ +
T Consensus 136 g~~P~~~a~spDG--k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 136 GTYPWMTSLTPDG--KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp SCCGGGEEECTTS--SEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSS
T ss_pred CCCCceEEEcCCC--CEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCC
Confidence 1245679999999 67777763 6899999999999999997642 1 223332345667777899999999876 5
Q ss_pred ceeeeeee---cccCCe-eEEEEe-cCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee----------ccCCceeeEE
Q 016457 157 KQVACLEE---SHVEDV-TQVHFV-PNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI----------NVGTSVGKVG 221 (389)
Q Consensus 157 ~~~~~~~~---~~~~~v-~~~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~~~~~i~~~~ 221 (389)
+....... ....++ ....|. ++| .++..+.+|.|++.|+.+... .....+. -.......++
T Consensus 211 ~v~~~~~~~~~~~~~~~~~~~~~~~~dG--~~~~vs~~g~V~v~d~~~~~~--~v~~~~~~~~~~~~~~g~~p~g~q~~a 286 (386)
T 3sjl_D 211 TPEITHTEVFHPEDEFLINHPAYSQKAG--RLVWPTYTGKIHQIDLSSGDA--KFLPAVEALTEAERADGWRPGGWQQVA 286 (386)
T ss_dssp CCEEEECCCCSCTTSCBCSCCEEETTTT--EEEEEBTTSEEEEEECTTSSC--EECCCEESSCHHHHHTTEEECSSSCEE
T ss_pred eEEEeecceeccccccccccceeEcCCC--cEEEEeCCCEEEEEECCCCcc--eeecceeccccccccccccCCCcceee
Confidence 54321110 111222 124665 555 444466789999999985421 1111111 0122344577
Q ss_pred EecCCCcEEEEEec----------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC
Q 016457 222 FFGETNKHLWCLTH----------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG 291 (389)
Q Consensus 222 ~~~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~ 291 (389)
++ ++++.+++... .++|.++|+.+++.+..+... ..+.++.+++|++.+++++...
T Consensus 287 ~~-~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-------------~~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 287 YH-RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-------------HEIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp EE-TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------------EEECEEEECSSSSCEEEEEETT
T ss_pred EC-CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-------------CCcceEEECCCCCeEEEEEcCC
Confidence 78 55566666543 257999999999999988753 4678999999997444555667
Q ss_pred CceEEEEEeccCCc
Q 016457 292 AGTVGYFPVNYGGA 305 (389)
Q Consensus 292 dg~i~i~~~~~~~~ 305 (389)
++.|.++|..+++.
T Consensus 353 ~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 353 DKTLYIHDAESGEE 366 (386)
T ss_dssp TTEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcE
Confidence 89999999998876
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=8.9e-14 Score=118.68 Aligned_cols=244 Identities=10% Similarity=0.022 Sum_probs=163.7
Q ss_pred CcceEEEeecCCCCeEEE-------EecCCeEEEEeCCCceeeeeec----CCCCcEEEEEEeCC-CCCCEEEEEecCCe
Q 016457 38 DDYVFEIVPKNDWSLMAV-------SLSTNVVKLYSPVTGQYSGECK----GHSSTVNQISFSGP-STPHVLHSCSSDGT 105 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~----~~~~~v~~i~~~~~-~~~~~l~s~~~dg~ 105 (389)
-....+++|++++.++++ +..++.|.+||..+++...... ++...+.++++.++ + .|+.++..+.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g---~l~v~~~~~~ 93 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN---QLFVADMRLG 93 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS---EEEEEETTTE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC---cEEEEECCCC
Confidence 445678999999987777 5678999999988776543221 24567899999998 6 4444444557
Q ss_pred EEEEEccCCeEEEE-EEcC----CCCeEEEEEeCCCCeEEEeecC---------------CeEEEEECcCCceeeeeeec
Q 016457 106 IRAWDTRSFHEVWS-VTAG----SQEIFCFSFGGSTDYLLAAGCG---------------SQIQFWDWRNKKQVACLEES 165 (389)
Q Consensus 106 i~iwd~~~~~~~~~-~~~~----~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~~~~~~~~~~~ 165 (389)
|.+||.. ++.... .... ...+.++++++++..+++...+ +.|..||.. ++..... .
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~--~ 169 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD--T 169 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE--E
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec--c
Confidence 9999988 665432 2211 2358899999887666555444 567778765 5443322 2
Q ss_pred ccCCeeEEEEe----cCCCCeEEEEeCCCcEEEEecC-CCCCC-CccceeeeccC-CceeeEEEecCCCcEEEEEecCCc
Q 016457 166 HVEDVTQVHFV----PNNQNKVVSASVDGLICTFDTG-GDIND-DDLLESVINVG-TSVGKVGFFGETNKHLWCLTHIET 238 (389)
Q Consensus 166 ~~~~v~~~~~~----~~~~~~l~~~~~d~~i~i~d~~-~~~~~-~~~~~~~~~~~-~~i~~~~~~~~~~~~l~~~~~d~~ 238 (389)
+......++++ |+++.++++...++.|.+||+. .+... ......+..+. ..+..+++. +++.++++...++.
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d-~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD-EDNNLLVANWGSSH 248 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB-TTCCEEEEEETTTE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC-CCCCEEEEEcCCCE
Confidence 34556889999 9985244555568899999976 22100 00111122222 557889998 67777777778889
Q ss_pred EEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 239 LSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 239 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
|.+||..+++.+..+.. +...+.+++++++++.+| ++...++.|..|++..
T Consensus 249 i~~~d~~~g~~~~~~~~------------~~~~~~~i~~~~dg~~l~-v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRC------------PFEKPSNLHFKPQTKTIF-VTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEEC------------SSSCEEEEEECTTSSEEE-EEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEeEEEeC------------CCCCceeEEECCCCCEEE-EEeCCCCeEEEEeCCC
Confidence 99999987777666654 336788999999987443 3445567899998875
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=5.5e-13 Score=116.05 Aligned_cols=258 Identities=10% Similarity=0.008 Sum_probs=171.1
Q ss_pred eEEEEecC--ceeeeeecCcceEEEeecCCCCeEEEEe----------cCCeEEEEeCCCceeeeeecCC-------CCc
Q 016457 22 SIKRFGLK--NSIQTNFGDDYVFEIVPKNDWSLMAVSL----------STNVVKLYSPVTGQYSGECKGH-------SST 82 (389)
Q Consensus 22 ~i~~w~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~-------~~~ 82 (389)
.|.++|.. +.+.++.....- .++++|||+.++++. .++.|.+||..+++.+..+... ...
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY 126 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC
Confidence 78888875 344444432223 999999999999886 3678999999988877765422 123
Q ss_pred EEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCeEEEE-EEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEEECcCCce
Q 016457 83 VNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFHEVWS-VTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFWDWRNKKQ 158 (389)
Q Consensus 83 v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~ 158 (389)
-..++|+|++ ++|+.+.. ++.|.++| .+++.+.. +... . ++.+.|.++. +++.+.||.+.++|. +++.
T Consensus 127 p~~~~~spDG--~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 127 SWMNANTPNN--ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred ccceEECCCC--CEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 4589999999 68887764 57899999 99988877 6543 2 2444455544 445556999999999 7776
Q ss_pred eeeeee----cccCC-eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec----------cCCceeeEEEe
Q 016457 159 VACLEE----SHVED-VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN----------VGTSVGKVGFF 223 (389)
Q Consensus 159 ~~~~~~----~~~~~-v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----------~~~~i~~~~~~ 223 (389)
+..... ....+ .....+.+++. .++..+..+.+.+.|+.+... ..+..+.. .......++++
T Consensus 199 ~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~v~vid~~~~~~--~v~~~~~~~~~~~~~~~~~p~g~~~~~~s 275 (373)
T 2mad_H 199 AGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGA--TNKAPIDALSGGRKADTWRPGGWQQVAYL 275 (373)
T ss_pred EEEEeccccccCCcceeecceeEecCC-EEEEEcCCceEEEEeccCCcc--eEeeeeeecCCcccccceecCceEeEEEC
Confidence 633210 01112 12345666664 444444788999999974321 11111110 11223346777
Q ss_pred cCCCcEEEEEec----------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc
Q 016457 224 GETNKHLWCLTH----------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG 293 (389)
Q Consensus 224 ~~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg 293 (389)
+++..++++.. .+.|.++|+.+++.+..+... .....+.|+|||+.+++++...++
T Consensus 276 -~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-------------~~p~~i~~s~Dg~~~l~v~~~~~~ 341 (373)
T 2mad_H 276 -KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-------------HDVDAISVAQDGGPDLYALSAGTE 341 (373)
T ss_pred -CCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-------------CCcCeEEECCCCCeEEEEEcCCCC
Confidence 56666666543 358999999999998888642 457899999999843344443589
Q ss_pred eEEEEEeccCCc
Q 016457 294 TVGYFPVNYGGA 305 (389)
Q Consensus 294 ~i~i~~~~~~~~ 305 (389)
.|.+||..+++.
T Consensus 342 ~V~ViD~~t~~v 353 (373)
T 2mad_H 342 VLHIYDAGAGDQ 353 (373)
T ss_pred eEEEEECCCCCE
Confidence 999999998876
No 202
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.67 E-value=1.6e-12 Score=110.00 Aligned_cols=258 Identities=7% Similarity=-0.074 Sum_probs=169.1
Q ss_pred CCeEEEEecCceeeeeec---CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceee-eeecCCCCcEEEEEEeCCCCCC
Q 016457 20 VNSIKRFGLKNSIQTNFG---DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYS-GECKGHSSTVNQISFSGPSTPH 95 (389)
Q Consensus 20 ~~~i~~w~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~ 95 (389)
++.|..|+.......+.. ...+.++++++++.++++...++.|..|+.. ++.. ..+......+..+++.+++ .
T Consensus 35 ~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g--~ 111 (299)
T 2z2n_A 35 ANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG--D 111 (299)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS--C
T ss_pred CCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC--C
Confidence 456777776644443331 4678999999999877776668899999976 4322 1222345678999999888 5
Q ss_pred EEEEEecCCeEEEEEccCCeEEEE-EEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEE
Q 016457 96 VLHSCSSDGTIRAWDTRSFHEVWS-VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVH 174 (389)
Q Consensus 96 ~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 174 (389)
++++...++.|..||. +++.... .......+.++++.+++..+++...++.|..||. +++............+..++
T Consensus 112 l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 189 (299)
T 2z2n_A 112 IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGIT 189 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEE
Confidence 7777667889999998 5544322 2223467899999977755554545789999998 66544321113445688999
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
+++++. ++++...++.|.+||. ++. ............+..+++. +++.++++...++.|..||. +++ +..+.
T Consensus 190 ~~~~g~-l~v~~~~~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~ 261 (299)
T 2z2n_A 190 KGNDDA-LWFVEIIGNKIGRITT-SGE---ITEFKIPTPNARPHAITAG-AGIDLWFTEWGANKIGRLTS-NNI-IEEYP 261 (299)
T ss_dssp ECTTSS-EEEEETTTTEEEEECT-TCC---EEEEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEEET-TTE-EEEEE
T ss_pred ECCCCC-EEEEccCCceEEEECC-CCc---EEEEECCCCCCCceeEEEC-CCCCEEEeccCCceEEEECC-CCc-eEEEe
Confidence 999985 7776666889999998 432 1111112234568899998 66775555557789999998 453 33332
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
... +...+.++++ +++. +.++.. .+.|..++..+++
T Consensus 262 ~~~----------~~~~~~~i~~-~~g~--l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 262 IQI----------KSAEPHGICF-DGET--IWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp CSS----------SSCCEEEEEE-CSSC--EEEEET-TTEEEEEEEC---
T ss_pred CCC----------CCCccceEEe-cCCC--EEEEec-CCcEEEEEcCccc
Confidence 111 3356788888 7776 444444 5667778776543
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=2.4e-14 Score=136.71 Aligned_cols=277 Identities=8% Similarity=0.017 Sum_probs=172.7
Q ss_pred ecCCCCeEEEEecCCe---EEEE--eCC---Cceeeeee------cCCCCcEEEEEEeCCCCCCEEEEEecC-----CeE
Q 016457 46 PKNDWSLMAVSLSTNV---VKLY--SPV---TGQYSGEC------KGHSSTVNQISFSGPSTPHVLHSCSSD-----GTI 106 (389)
Q Consensus 46 ~~~~~~~l~~~~~d~~---i~iw--~~~---~~~~~~~~------~~~~~~v~~i~~~~~~~~~~l~s~~~d-----g~i 106 (389)
..|+|++++....++. -.|| +.. .++....+ .+|...+..++|+|++ ++|+.+..+ ..|
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG--~~la~~~~~~G~e~~~i 191 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDG--RLLAYSVQDGGSDWRTV 191 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTS--SEEEEEEEETTCSEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCC--CEEEEEEcCCCCceEEE
Confidence 3589998887765432 4445 433 33322221 2244478899999999 677776543 369
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCe--------------EEEEECcCCce--eeeeee-cccCC
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQ--------------IQFWDWRNKKQ--VACLEE-SHVED 169 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~iwd~~~~~~--~~~~~~-~~~~~ 169 (389)
++||+.+++.+... .+...+..++|+|+ +.|+.+..++. |++|++.++.. ...+.. .+...
T Consensus 192 ~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~ 269 (741)
T 1yr2_A 192 KFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR 269 (741)
T ss_dssp EEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC
T ss_pred EEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE
Confidence 99999999876532 11222357899999 88888876543 89999877653 122221 23335
Q ss_pred eeEEEEecCCCCeEEEEeCCC-----cEEEEecCCCCCCCcc-ceeeeccCCceeeEEEecCCCcEEEEEecC----CcE
Q 016457 170 VTQVHFVPNNQNKVVSASVDG-----LICTFDTGGDINDDDL-LESVINVGTSVGKVGFFGETNKHLWCLTHI----ETL 239 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----~~i 239 (389)
+..+.|+|+|+ +|+..+.++ .|++||+.++. .. ...+..+...+.... + ++++.|+..+.+ +.|
T Consensus 270 ~~~~~~SpDG~-~l~~~~~~~~~~~~~l~~~d~~~~~---~~~~~~l~~~~~~~~~~~-~-~dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 270 GHGASVSSDGR-WVVITSSEGTDPVNTVHVARVTNGK---IGPVTALIPDLKAQWDFV-D-GVGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp EEEEEECTTSC-EEEEEEECTTCSCCEEEEEEEETTE---ECCCEEEECSSSSCEEEE-E-EETTEEEEEECTTCTTCEE
T ss_pred EEEEEECCCCC-EEEEEEEccCCCcceEEEEECCCCC---CcccEEecCCCCceEEEE-e-ccCCEEEEEECCCCCCCEE
Confidence 88999999996 777666443 79999997531 11 334444444444443 4 456666666653 459
Q ss_pred EEEEcCCCc-eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec-cCCccccCCCeEEEec
Q 016457 240 SIWDWKDGQ-NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN-YGGAATIGPPEAVLVG 317 (389)
Q Consensus 240 ~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~-~~~~~~~~~~~~~~~~ 317 (389)
.+||+.++. ....+... +...+..+.++ ++. ++++...|+..+||.+. .++. ...+..
T Consensus 344 ~~~d~~~~~~~~~~l~~~-----------~~~~l~~~~~~-~~~--lv~~~~~dg~~~l~~~~~~g~~------~~~l~~ 403 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPE-----------SKDNLESVGIA-GNR--LFASYIHDAKSQVLAFDLDGKP------AGAVSL 403 (741)
T ss_dssp EEEECSSSSCEEEEEECC-----------CSSEEEEEEEE-BTE--EEEEEEETTEEEEEEEETTSCE------EEECBC
T ss_pred EEEeCCCCccccEEEecC-----------CCCeEEEEEEE-CCE--EEEEEEECCEEEEEEEeCCCCc------eeeccC
Confidence 999988752 33333321 33456667776 333 67788888888877665 2322 344432
Q ss_pred ccceeeeeccCCCcccCCCCCCCceeEE----EecCCCeEEEEeccCC
Q 016457 318 GHTAVVRSVLPMPSVQGRPAQSHGIFGW----TGGEDGRLCCWLSDDS 361 (389)
Q Consensus 318 ~h~~~v~~~~~~~~~~~~~~s~~~~~l~----s~~~dg~v~iW~~~~~ 361 (389)
.+...|..+ ++++++..|+ +....+.|++|++...
T Consensus 404 ~~~~~v~~~---------~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 404 PGIGSASGL---------SGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp SSSCEEEEE---------ECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred CCCeEEEEe---------ecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 235667777 8889887666 4456689999998764
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.67 E-value=8.6e-14 Score=121.76 Aligned_cols=286 Identities=13% Similarity=0.097 Sum_probs=192.4
Q ss_pred cCCCCeEEEEecC-----CeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe----------cCCeEEEEEc
Q 016457 47 KNDWSLMAVSLST-----NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS----------SDGTIRAWDT 111 (389)
Q Consensus 47 ~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~----------~dg~i~iwd~ 111 (389)
.++++.+++.... +.|.++|..+++.+..+..-..+ .++++|++ +.++.+. .++.|.++|.
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDg--k~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDG--SFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTS--SCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCC--CEEEEEeccccccccCCCCCEEEEEEC
Confidence 3577777766553 69999999999999988755555 89999999 5666654 4678999999
Q ss_pred cCCeEEEEEEcC-------CCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCe
Q 016457 112 RSFHEVWSVTAG-------SQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNK 182 (389)
Q Consensus 112 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 182 (389)
.+++.+..+... ......+.++|++++++++.. ++.|.++|+.+++.+.++.- .. +....|++...
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g---~~~~~p~g~~~ 231 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PD---CYHIFPASPTV 231 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CS---EEEEEEEETTE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CC---ceeeccCCCcE
Confidence 999999888643 134567899999999999874 58999999999999888872 11 13445555457
Q ss_pred EEEEeCCCcEEEEecCCCCCCCccceeeeccCCce-eeEEEecCCCcEEEEEecCCcEEEEEcCCCcee--EEeecc--c
Q 016457 183 VVSASVDGLICTFDTGGDINDDDLLESVINVGTSV-GKVGFFGETNKHLWCLTHIETLSIWDWKDGQNV--ASFENA--R 257 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~--~ 257 (389)
+++.+.||.+.+.++.++.........+.....++ ..+.+. +++..++..+..+.+.+.|+...... ..+... .
T Consensus 232 ~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~-~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 232 FYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFS-LRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp EEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEEC-TTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred EEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeec-CCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccc
Confidence 77888889888888853321100000011111121 235566 55666666677889999998754322 111100 0
Q ss_pred ccccCCccCCCCCceeeecccCCCCeEEEEEec--------CCceEEEEEeccCCccccCCCeEEEecccceeeeeccCC
Q 016457 258 SLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT--------GAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPM 329 (389)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~--------~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 329 (389)
... ..| .......++++|+++++|++... .++.|.++|..+.+. +..+..+. ....+
T Consensus 311 ~i~-~g~---~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv------v~~I~vg~--~P~gi--- 375 (426)
T 3c75_H 311 ERA-DDW---RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER------INKIELGH--EIDSI--- 375 (426)
T ss_dssp TGG-GTE---EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE------EEEEEEEE--EECEE---
T ss_pred ccc-ccc---ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE------EEEEECCC--CcCeE---
Confidence 000 000 01222346899999987766432 246899999999877 66665332 46777
Q ss_pred CcccCCCCCCCce-eEEEec-CCCeEEEEeccCCcc
Q 016457 330 PSVQGRPAQSHGI-FGWTGG-EDGRLCCWLSDDSSE 363 (389)
Q Consensus 330 ~~~~~~~~s~~~~-~l~s~~-~dg~v~iW~~~~~~~ 363 (389)
+|+|||+ +|+++. .++.|.++|+.....
T Consensus 376 ------a~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 376 ------NVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp ------EECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred ------EEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 8999998 788877 599999999987643
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.67 E-value=1.7e-13 Score=121.01 Aligned_cols=247 Identities=14% Similarity=0.115 Sum_probs=167.2
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCC--eEEEEEccCCeE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG--TIRAWDTRSFHE 116 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~ 116 (389)
.....++|+++++++++...++.|++||..+++........ .... ++|++++ +.|+++..++ .|.+++...+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g--~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDK--QRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTS--SEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCC--CcEEEEecCCCceEEEEEcCCCce
Confidence 35789999999987777777799999999887766555442 3334 9999998 6888887766 788898876654
Q ss_pred EEEE----EcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeee----eeecccCCe--eEEEEecCCCCeEEEE
Q 016457 117 VWSV----TAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC----LEESHVEDV--TQVHFVPNNQNKVVSA 186 (389)
Q Consensus 117 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~----~~~~~~~~v--~~~~~~~~~~~~l~~~ 186 (389)
...+ ......+.+++++|.++.|+++..++.|..||..++..... .. ++...- ..++|+|++..++++-
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~-g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELS-GSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCC-SCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEeccccc-CCCCCCccccEEEeCCCCEEEEEe
Confidence 4444 21346678999998778888877788999999987653222 11 222222 3999999644477777
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccC---------------CceeeEEEecCCCcEEEEEe-cCCcEEEEEcCCCcee
Q 016457 187 SVDGLICTFDTGGDINDDDLLESVINVG---------------TSVGKVGFFGETNKHLWCLT-HIETLSIWDWKDGQNV 250 (389)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~ 250 (389)
..++.|+.|+.... ...+.+.. .....++++ +++.++++-+ .++.|+.|++.++...
T Consensus 286 ~~~~~I~~~~~~g~------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d-~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 286 QNLSSVYKITPDGE------CEWFCGSATQKTVQDGLREEALFAQPNGMTVD-EDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp TTTTEEEEECTTCC------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC-TTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred CCCCEEEEEecCCC------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe-CCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 77889999998732 22222221 346789999 6777777777 7889999998777643
Q ss_pred EEeeccccccc---CCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEe
Q 016457 251 ASFENARSLAS---DSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPV 300 (389)
Q Consensus 251 ~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~ 300 (389)
.+.+...... ..-....-.....+++++++. ++++-..++.|+.+++
T Consensus 359 -~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~--lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 -TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG--YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp -EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE--EEEEESTTCEEEEEEE
T ss_pred -EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC--EEEEECCCCeEEEEEe
Confidence 3333210000 000000124578899999865 6677777888888765
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=6.4e-14 Score=133.79 Aligned_cols=243 Identities=11% Similarity=0.048 Sum_probs=161.8
Q ss_pred ceEEEeecCCCCeEEEEecC-----CeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCe---------
Q 016457 40 YVFEIVPKNDWSLMAVSLST-----NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGT--------- 105 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~--------- 105 (389)
.+..++|||||++||.+..+ ..|++||+.+++.+.... +...+..++|+|+ + .|+.+..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~--~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-D--ALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-S--EEEEEECCCC--------C
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-C--EEEEEEecCcccccccccC
Confidence 67889999999999988764 369999999988754321 2222367899998 4 5655555443
Q ss_pred -----EEEEEccCCeE--EEEEEcC--CCCeEEEEEeCCCCeEEEeecCC-----eEEEEECcCC--ceeeeeeecccCC
Q 016457 106 -----IRAWDTRSFHE--VWSVTAG--SQEIFCFSFGGSTDYLLAAGCGS-----QIQFWDWRNK--KQVACLEESHVED 169 (389)
Q Consensus 106 -----i~iwd~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~--~~~~~~~~~~~~~ 169 (389)
|.+|++.++.. ...+... ...+..+.|+|+++.++..+.++ .|++||+.++ +....+. .+...
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~ 318 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI-PDLKA 318 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-CSSSS
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-CCCCc
Confidence 88999877652 2333332 23588999999999988877643 8999999876 3145555 34444
Q ss_pred eeEEEEecCCCCeEEEEeC----CCcEEEEecCCCCCCCccceee-eccCCceeeEEEecCCCcEEEEEecCCcEEEEEc
Q 016457 170 VTQVHFVPNNQNKVVSASV----DGLICTFDTGGDINDDDLLESV-INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDW 244 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~ 244 (389)
+.... .|++. .|+..+. ++.|.+||+.++. .....+ ..+...+..+.+. ++.++++...|+..+||.+
T Consensus 319 ~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~---~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 319 QWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGST---PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp CEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSS---CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEE
T ss_pred eEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCc---cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEE
Confidence 55543 47885 6766665 3459999987531 112223 2334456677776 4567888888987776654
Q ss_pred C-CCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe--cCCceEEEEEeccCCc
Q 016457 245 K-DGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG--TGAGTVGYFPVNYGGA 305 (389)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g--~~dg~i~i~~~~~~~~ 305 (389)
. +++....+... +...+..+.++|+++.+++... ...+.|++||+.+++.
T Consensus 392 ~~~g~~~~~l~~~-----------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 392 DLDGKPAGAVSLP-----------GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTSCEEEECBCS-----------SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eCCCCceeeccCC-----------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4 35555555421 2367888999999886544333 3458899999987654
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=2.3e-13 Score=116.07 Aligned_cols=244 Identities=9% Similarity=0.016 Sum_probs=159.8
Q ss_pred CCcEEEEEEeCCCCCCEEEE-------EecCCeEEEEEccCCeEEEEEEc-----CCCCeEEEEEeCCCCeEEEeecCCe
Q 016457 80 SSTVNQISFSGPSTPHVLHS-------CSSDGTIRAWDTRSFHEVWSVTA-----GSQEIFCFSFGGSTDYLLAAGCGSQ 147 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s-------~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~ 147 (389)
-....+++|.+++ .++++ +..++.|.+||..+++... +.. +...+.+++++++++.+++++..+.
T Consensus 17 ~~~~~~~~~~~~g--~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~ 93 (314)
T 1pjx_A 17 IPGAEGPVFDKNG--DFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADMRLG 93 (314)
T ss_dssp CTTCEEEEECTTS--CEEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEETTTE
T ss_pred CCCccCceECCCC--CEEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEECCCC
Confidence 3456789999888 57777 5778899999988776543 322 3467899999977466666666568
Q ss_pred EEEEECcCCceeee-eee---cccCCeeEEEEecCCCCeEEEEeCC---------------CcEEEEecCCCCCCCccce
Q 016457 148 IQFWDWRNKKQVAC-LEE---SHVEDVTQVHFVPNNQNKVVSASVD---------------GLICTFDTGGDINDDDLLE 208 (389)
Q Consensus 148 i~iwd~~~~~~~~~-~~~---~~~~~v~~~~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~ 208 (389)
|.+||.. ++.... ... .....+.++++++++. ++++...+ +.|..||.. +. ..
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-----~~ 165 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-----MI 165 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-----EE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CC-----EE
Confidence 9999988 654332 210 1124588999999985 77766554 567777765 21 22
Q ss_pred eeeccCCceeeEEEe----cCCCcEEEEEecCCcEEEEEcC-CCcee--EEeecccccccCCccCCCC-CceeeecccCC
Q 016457 209 SVINVGTSVGKVGFF----GETNKHLWCLTHIETLSIWDWK-DGQNV--ASFENARSLASDSWTLDDV-DYFVDCHYPGE 280 (389)
Q Consensus 209 ~~~~~~~~i~~~~~~----~~~~~~l~~~~~d~~i~i~d~~-~~~~~--~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~ 280 (389)
...........++++ +....++++...++.|.+|++. +++.. ..+.... .+. .....++++++
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---------~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP---------GTHEGGADGMDFDED 236 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC---------CCSSCEEEEEEEBTT
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC---------CCCCCCCCceEECCC
Confidence 222333455778887 5432334444567899999976 44321 1111100 022 45678999999
Q ss_pred CCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCcee-EEEecCCCeEEEEecc
Q 016457 281 GENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIF-GWTGGEDGRLCCWLSD 359 (389)
Q Consensus 281 ~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~-l~s~~~dg~v~iW~~~ 359 (389)
|. +.++...++.|.+|+..+++. +..+. .+...+.++ +|+++|++ +++...++.|..|+++
T Consensus 237 G~--l~v~~~~~~~i~~~d~~~g~~------~~~~~-~~~~~~~~i---------~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 237 NN--LLVANWGSSHIEVFGPDGGQP------KMRIR-CPFEKPSNL---------HFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp CC--EEEEEETTTEEEEECTTCBSC------SEEEE-CSSSCEEEE---------EECTTSSEEEEEETTTTEEEEEECS
T ss_pred CC--EEEEEcCCCEEEEEcCCCCcE------eEEEe-CCCCCceeE---------EECCCCCEEEEEeCCCCeEEEEeCC
Confidence 87 566666778899999886654 34443 455667788 89999984 4555667899999987
Q ss_pred CC
Q 016457 360 DS 361 (389)
Q Consensus 360 ~~ 361 (389)
..
T Consensus 299 ~~ 300 (314)
T 1pjx_A 299 RN 300 (314)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=1.4e-12 Score=115.17 Aligned_cols=251 Identities=7% Similarity=-0.029 Sum_probs=165.1
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCC--eEEEEECcCCce
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS--QIQFWDWRNKKQ 158 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~ 158 (389)
.....|+|.+++ +++++...++.|+.||..++.......... ... ++|+|+++.++++..++ .|.++|...+..
T Consensus 131 ~~P~~la~d~~g--~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVGNN--TVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECSTT--EEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeCCC--CEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 457899999988 677777777899999998877766555533 333 99999999888888755 899999876654
Q ss_pred eeee---eecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCcccee--eeccCCce-e-eEEEecCCCcEEE
Q 016457 159 VACL---EESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLES--VINVGTSV-G-KVGFFGETNKHLW 231 (389)
Q Consensus 159 ~~~~---~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~i-~-~~~~~~~~~~~l~ 231 (389)
...+ .......+.+++++|++. .|+.+..++.|+.||..++. ...... .......- . .++|+|.++.+++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 3333 111446678999999554 55557778899999998542 011100 11111111 3 8999954677777
Q ss_pred EEecCCcEEEEEcCCCceeEEeeccccccc---CCccCCCCCceeeecccCCCCeEEEEEec-CCceEEEEEeccCCccc
Q 016457 232 CLTHIETLSIWDWKDGQNVASFENARSLAS---DSWTLDDVDYFVDCHYPGEGENLWVIGGT-GAGTVGYFPVNYGGAAT 307 (389)
Q Consensus 232 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~l~~g~-~dg~i~i~~~~~~~~~~ 307 (389)
+...++.|+.|+.... +..+.+...... ..-....-.....++++++|+ ++++-. .++.|+.|++.++..
T Consensus 284 ~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~--lyvad~~~~~~I~~~~~~~G~v-- 357 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN--FYIVDGFKGYCLRKLDILDGYV-- 357 (409)
T ss_dssp EETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC--EEEEETTTTCEEEEEETTTTEE--
T ss_pred EeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC--EEEEeCCCCCEEEEEECCCCEE--
Confidence 7777889999987643 333332110000 000000124478899999998 667777 889999999776654
Q ss_pred cCCCeEEEecccc---------------eeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEecc
Q 016457 308 IGPPEAVLVGGHT---------------AVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSD 359 (389)
Q Consensus 308 ~~~~~~~~~~~h~---------------~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~ 359 (389)
..+. ++. .....+ +++++|.++++-..++.|+.+.++
T Consensus 358 -----~~~~-g~~~~~g~~~g~~~~~~~~~P~gi---------avd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 -----STVA-GQVDVASQIDGTPLEATFNYPYDI---------CYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp -----EEEE-ECTTCBSCCCBSTTTCCBSSEEEE---------EECSSSEEEEEESTTCEEEEEEEC
T ss_pred -----EEEe-CCCCCCCcCCCChhceEeCCceEE---------EEcCCCCEEEEECCCCeEEEEEeC
Confidence 3333 331 123334 899999999998889999988763
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.63 E-value=1.2e-12 Score=110.78 Aligned_cols=231 Identities=11% Similarity=0.021 Sum_probs=152.5
Q ss_pred ceEEEeecCCC-CeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 40 YVFEIVPKNDW-SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 40 ~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
-.-+..|++++ .++++...++.|..||..+++. ..+. ....+.++++.+++ +++++ . ++.|.+||..+++...
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG--~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSG--GYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTS--SEEEE-E-TTEEEEEETTTTEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCC--CEEEE-E-CCeEEEEECCCCcEEE
Confidence 34478899965 4566666688999999987754 3333 45679999999998 54444 4 5679999998877544
Q ss_pred EEEcC----CCCeEEEEEeCCCCeEEEeecC---------CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 119 SVTAG----SQEIFCFSFGGSTDYLLAAGCG---------SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 119 ~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
..... ...+..++++|++..+++.... ..-.+|.+.....+..+. ......+.++|+|+++.++++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-DQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-EEESBEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-eccccccceEEcCCCCEEEEe
Confidence 33321 2357889999888755543221 223444443222222233 244557899999999634566
Q ss_pred EeCCCcEEEEecC--CCCCC-CccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccC
Q 016457 186 ASVDGLICTFDTG--GDIND-DDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASD 262 (389)
Q Consensus 186 ~~~d~~i~i~d~~--~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 262 (389)
.+.++.|.+||+. ++... ......+......+..+++. +++.+.++....+.|..||..+++.+..+..
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d-~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~------- 238 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID-AEGKLWVACYNGGRVIRLDPVTGKRLQTVKL------- 238 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB-TTSCEEEEEETTTEEEEECTTTCCEEEEEEC-------
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC-CCCCEEEEEcCCCEEEEEcCCCceEEEEEEC-------
Confidence 6678899999974 22100 01111222234567889998 6777777777778899999998998888765
Q ss_pred CccCCCCCceeeeccc-CCCCeEEEEEec
Q 016457 263 SWTLDDVDYFVDCHYP-GEGENLWVIGGT 290 (389)
Q Consensus 263 ~~~~~~~~~i~~~~~~-~~~~~~~l~~g~ 290 (389)
+...+++++|. |+++.+|+.++.
T Consensus 239 -----p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 239 -----PVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp -----SSSBEEEEEEESGGGCEEEEEEBC
T ss_pred -----CCCCceEEEEeCCCCCEEEEEcCC
Confidence 33678999998 888877666653
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.62 E-value=2.3e-13 Score=117.45 Aligned_cols=239 Identities=13% Similarity=0.052 Sum_probs=157.4
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCce---------eee-eecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ---------YSG-ECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRA 108 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------~~~-~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~i 108 (389)
..++.+++++...++++|+.+ .+.+|+++..+ ... ....+.. |+.++| ++ .+|+++ .++.|++
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~--~~L~v~-~~~~l~v 110 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG--DQVLVS-TRNALYS 110 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET--TEEEEE-ESSEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC--CEEEEE-cCCcEEE
Confidence 468999999999999999976 46679865433 111 1223566 999999 66 688888 8899999
Q ss_pred EEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC
Q 016457 109 WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188 (389)
Q Consensus 109 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 188 (389)
||+.+.........+...+.++.+.+. .++++..||.|.+||+.++.... +...|+|++|+|+| ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG---~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ---LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE---EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc---eEEEEc
Confidence 999877766667777788988887644 48888899999999999777643 34579999999998 577889
Q ss_pred CCcEEEEecCCCCCCCccceee------e---ccCCceeeEEEecCCCcEEEEEecCC-----------cEEEEEcCCCc
Q 016457 189 DGLICTFDTGGDINDDDLLESV------I---NVGTSVGKVGFFGETNKHLWCLTHIE-----------TLSIWDWKDGQ 248 (389)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~------~---~~~~~i~~~~~~~~~~~~l~~~~~d~-----------~i~i~d~~~~~ 248 (389)
||.+++|+..+.... ....+ . ++...|.++.|. +++.++++-.... .++|.....+.
T Consensus 181 dg~i~~~~~~~~~~~--~k~~I~~Pp~~~~~~~~~~~V~sI~wl-~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~~~~ 257 (388)
T 1xip_A 181 DRSFQSFAWRNGEME--KQFEFSLPSELEELPVEEYSPLSVTIL-SPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGS 257 (388)
T ss_dssp TSCEEEEEEETTEEE--EEEEECCCHHHHTSCTTTSEEEEEEES-SSSEEEEEEECCCCSSCSSCCCCEEEEEEEEETTE
T ss_pred CCcEEEEcCCCcccc--ccceecCCcccccccCCCeeEEEEEEe-cCCeEEEEEcCCCCCcCcccCCcceEEEEEcCCCC
Confidence 999999988743200 01112 1 367889999999 6777777643311 35555532222
Q ss_pred eeEEeecccccc--cCCccCCC-CCceeeecccCCCCeEEEEEecCCceEEEEE
Q 016457 249 NVASFENARSLA--SDSWTLDD-VDYFVDCHYPGEGENLWVIGGTGAGTVGYFP 299 (389)
Q Consensus 249 ~~~~~~~~~~~~--~~~~~~~~-~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~ 299 (389)
.+|.....+. -......+ -....=-.|.|+.+.++|++.+..-.|-+++
T Consensus 258 --~~f~~~~d~~~~fg~~~R~~~~~~~~l~~w~~~~~~l~iv~Ss~S~di~il~ 309 (388)
T 1xip_A 258 --ASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWD 309 (388)
T ss_dssp --EEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTEEEEEEEETTCSBCEEEC
T ss_pred --ceeEccccCcCCcCCccCCceeeeeehhcccccCCcEEEEeCCCCcceEEec
Confidence 1221110100 00000011 1122223577777777677766666666664
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.62 E-value=5.6e-13 Score=116.64 Aligned_cols=261 Identities=10% Similarity=0.045 Sum_probs=177.0
Q ss_pred CeEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEe----------cCCeEEEEeCCCceeeeeecCC-------C
Q 016457 21 NSIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSL----------STNVVKLYSPVTGQYSGECKGH-------S 80 (389)
Q Consensus 21 ~~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~-------~ 80 (389)
+.|.++|.. +.+.++.. ..+ .++++||++.|+++. .++.|.++|..+++.+..+.-. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 789999976 45555554 444 899999999998886 3678999999999888776421 1
Q ss_pred CcEEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCC-CeEEEeecCCeEEEEECcCCc
Q 016457 81 STVNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGST-DYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~ 157 (389)
.....+.|+|++ ++++.+.. ++.|.+.|+.+++.+..+..... ....|.+ ..+++.+.||.+.+.++.+++
T Consensus 177 ~~P~~~~~spDG--k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 177 TYQWMNALTPDN--KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGE 250 (426)
T ss_dssp CCGGGSEECTTS--SEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTC
T ss_pred CCcceEEEcCCC--CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCc
Confidence 335678999999 68887764 57899999999999998886421 2233333 455666668888888886555
Q ss_pred eeee----eeecccCC-eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-----c---cCCceeeEEEec
Q 016457 158 QVAC----LEESHVED-VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-----N---VGTSVGKVGFFG 224 (389)
Q Consensus 158 ~~~~----~~~~~~~~-v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~---~~~~i~~~~~~~ 224 (389)
.... +. ....+ ...+.+.+++. .++..+..+.|.+.|+.+............ . .......++++
T Consensus 251 v~~~~~~~~~-v~~~p~~~~~~~~~dg~-~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s- 327 (426)
T 3c75_H 251 TKVTNTEVFH-TEDELLINHPAFSLRSG-RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYH- 327 (426)
T ss_dssp CEEEECCCCS-CTTSCBCSCCEECTTTC-EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEE-
T ss_pred EEEEeeeeec-cCCCceeeEeeecCCCC-EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEc-
Confidence 4421 21 11112 12456788886 666667789999999974321000000000 0 11122346888
Q ss_pred CCCcEEEEEec----------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCce
Q 016457 225 ETNKHLWCLTH----------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGT 294 (389)
Q Consensus 225 ~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~ 294 (389)
+++..+++... .+.|.++|+.+.+.+..+... .....+.|+|+|+.+++++...++.
T Consensus 328 ~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-------------~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 328 RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-------------HEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------------EEECEEEECCSSSCEEEEEETTTTE
T ss_pred CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-------------CCcCeEEEccCCCEEEEEEcCCCCe
Confidence 45555555432 357999999999999988753 3578899999998334455556899
Q ss_pred EEEEEeccCCc
Q 016457 295 VGYFPVNYGGA 305 (389)
Q Consensus 295 i~i~~~~~~~~ 305 (389)
|.++|..+.+.
T Consensus 395 VsVID~~t~kv 405 (426)
T 3c75_H 395 LHIYDAATGEE 405 (426)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999999876
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=3e-11 Score=102.13 Aligned_cols=255 Identities=8% Similarity=-0.043 Sum_probs=165.3
Q ss_pred CCeEEEEecCceeeeeec---CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee-eecCCCCcEEEEEEeCCCCCC
Q 016457 20 VNSIKRFGLKNSIQTNFG---DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG-ECKGHSSTVNQISFSGPSTPH 95 (389)
Q Consensus 20 ~~~i~~w~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~ 95 (389)
++.|..|+....+..+.. ...+.++++.+++.+.++...++.|..||.. ++... .+......+.++++.+++ .
T Consensus 40 ~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g--~ 116 (300)
T 2qc5_A 40 ANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG--D 116 (300)
T ss_dssp TTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT--C
T ss_pred CCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC--C
Confidence 456666665533333221 3678999999999877766667899999987 55432 222234678999999888 5
Q ss_pred EEEEEecCCeEEEEEccCCeEEEE-EEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEE
Q 016457 96 VLHSCSSDGTIRAWDTRSFHEVWS-VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVH 174 (389)
Q Consensus 96 ~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 174 (389)
++++...++.|..+|.. ++.... +......+.++++.+++..+++...++.|..+|. +++........+...+..++
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 194 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGIT 194 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEE
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEE
Confidence 77776667889999987 554422 2223467899999987774444444789999998 55543321112345688999
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
+.+++. ++++....+.|.+||.. +. ............+..+++. +++.++++...++.|..|+. +++.. .+.
T Consensus 195 ~d~~g~-l~v~~~~~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d-~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~ 266 (300)
T 2qc5_A 195 SGNDGA-LWFVEIMGNKIGRITTT-GE---ISEYDIPTPNARPHAITAG-KNSEIWFTEWGANQIGRITN-DNTIQ-EYQ 266 (300)
T ss_dssp ECTTSS-EEEEETTTTEEEEECTT-CC---EEEEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECT-TSCEE-EEE
T ss_pred ECCCCC-EEEEccCCCEEEEEcCC-Cc---EEEEECCCCCCCceEEEEC-CCCCEEEeccCCCeEEEECC-CCcEE-EEE
Confidence 999884 77766667789999984 21 0111112234567889998 56776665556789999998 44333 332
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
... ....+.+++++++|. +.++.. . .|..++..
T Consensus 267 ~~~----------~~~~~~~i~~~~~g~--l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 267 LQT----------ENAEPHGITFGKDGS--VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CCS----------TTCCCCCEEECTTSC--EEEECS-S-EEEEEEEC
T ss_pred CCc----------cCCccceeEeCCCCC--EEEEcc-C-ceEEeCCC
Confidence 211 225578889999886 444444 4 67766653
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.56 E-value=1.6e-11 Score=105.16 Aligned_cols=225 Identities=9% Similarity=-0.037 Sum_probs=145.5
Q ss_pred eEEEeecCCC-CeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE
Q 016457 41 VFEIVPKNDW-SLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119 (389)
Q Consensus 41 v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 119 (389)
..+.+|+|++ .++++...++.|..||..+++.. .+. ....+.+++|.+++ .++++ +.+ .|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg--~l~v~-~~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDS--KQLIA-SDD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETT--EEEEE-ETT-EEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCC--eEEEE-ECC-CEEEEECCCCcEEEE
Confidence 4577899975 45666666889999999877543 233 34679999999998 45554 444 499999988775433
Q ss_pred EEcC----CCCeEEEEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC
Q 016457 120 VTAG----SQEIFCFSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD 189 (389)
Q Consensus 120 ~~~~----~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 189 (389)
.... ...+.+++++|++..+++... .+.|..+| +++. ..+. ........++|+|+++.++++.+.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLF-ADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEE-EEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEee-CCCcccCCeEEcCCCCEEEEEECCC
Confidence 2211 235889999988875554432 24566666 4443 3333 2334578899999996334555567
Q ss_pred CcEEEEecC--CC-CCCC-ccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCcc
Q 016457 190 GLICTFDTG--GD-INDD-DLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWT 265 (389)
Q Consensus 190 ~~i~i~d~~--~~-~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
+.|.+||+. ++ .... .....+......+..+++. +++.+.++...++.|.+||. +++.+..+..
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d-~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~---------- 268 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCD-AEGHIWNARWGEGAVDRYDT-DGNHIARYEV---------- 268 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEEC-TTSCEEEEEETTTEEEEECT-TCCEEEEEEC----------
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEEC-CCCCEEEEEeCCCEEEEECC-CCCEEEEEEC----------
Confidence 899999986 33 2111 1111111233456788888 66776666666789999998 5777666654
Q ss_pred CCCCCceeeeccc-CCCCeEEEEEe
Q 016457 266 LDDVDYFVDCHYP-GEGENLWVIGG 289 (389)
Q Consensus 266 ~~~~~~i~~~~~~-~~~~~~~l~~g 289 (389)
+...+.+++|+ ++++.+|+.+.
T Consensus 269 --~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 269 --PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp --SCSBEEEEEEESTTSCEEEEEEB
T ss_pred --CCCCcEEEEEecCCCCEEEEEec
Confidence 33568999998 88876554443
No 214
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.56 E-value=4.7e-11 Score=104.57 Aligned_cols=259 Identities=11% Similarity=0.064 Sum_probs=165.9
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCe-
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEI- 127 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v- 127 (389)
++..+++++.++.|..+|..+|+.+..+............. ++ .++.++.++.|..+|..+++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~~---~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-DG---LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-TT---EEEEECTTSEEEEEETTTCCEEEEEECCC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-CC---EEEEEcCCCeEEEEECCCCcEEEEEeCCCCcee
Confidence 45578888889999999999999887766443222222232 33 78888899999999999999998887642221
Q ss_pred ----EEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC---------e-eEEEEecCCCCeEEEEeCCCcEE
Q 016457 128 ----FCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED---------V-TQVHFVPNNQNKVVSASVDGLIC 193 (389)
Q Consensus 128 ----~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---------v-~~~~~~~~~~~~l~~~~~d~~i~ 193 (389)
..... .++.+++++.++.|..+|.++++.+.......... + ...... + ..++.++.++.+.
T Consensus 178 ~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~-~~v~~~~~~g~l~ 252 (376)
T 3q7m_A 178 LRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--N-GVVFALAYNGNLT 252 (376)
T ss_dssp -CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--T-TEEEEECTTSCEE
T ss_pred ecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--C-CEEEEEecCcEEE
Confidence 22223 25678888889999999999999887765111100 1 111121 3 3788888899999
Q ss_pred EEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCcee
Q 016457 194 TFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFV 273 (389)
Q Consensus 194 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (389)
.+|..++. .+-... ......+... +..+++++.++.|..+|..+++.+....... ...+.
T Consensus 253 ~~d~~tG~----~~w~~~--~~~~~~~~~~---~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~-----------~~~~~ 312 (376)
T 3q7m_A 253 ALDLRSGQ----IMWKRE--LGSVNDFIVD---GNRIYLVDQNDRVMALTIDGGVTLWTQSDLL-----------HRLLT 312 (376)
T ss_dssp EEETTTCC----EEEEEC--CCCEEEEEEE---TTEEEEEETTCCEEEEETTTCCEEEEECTTT-----------TSCCC
T ss_pred EEECCCCc----EEeecc--CCCCCCceEE---CCEEEEEcCCCeEEEEECCCCcEEEeecccC-----------CCccc
Confidence 99998663 121111 1223344443 4478888899999999999998876655211 11122
Q ss_pred eecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeE
Q 016457 274 DCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRL 353 (389)
Q Consensus 274 ~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v 353 (389)
..... +. .|+.++.+|.|+++|..+++. +.... .....+... .. ..+..|+.++.||.|
T Consensus 313 ~~~~~--~~--~l~v~~~~g~l~~~d~~tG~~------~~~~~-~~~~~~~~~---------~~-~~~~~l~v~~~~G~l 371 (376)
T 3q7m_A 313 SPVLY--NG--NLVVGDSEGYLHWINVEDGRF------VAQQK-VDSSGFQTE---------PV-AADGKLLIQAKDGTV 371 (376)
T ss_dssp CCEEE--TT--EEEEECTTSEEEEEETTTCCE------EEEEE-CCTTCBCSC---------CE-EETTEEEEEBTTSCE
T ss_pred CCEEE--CC--EEEEEeCCCeEEEEECCCCcE------EEEEe-cCCCcceeC---------CE-EECCEEEEEeCCCEE
Confidence 22222 34 567788899999999998876 44443 212222221 11 123456778889999
Q ss_pred EEEe
Q 016457 354 CCWL 357 (389)
Q Consensus 354 ~iW~ 357 (389)
..|+
T Consensus 372 ~~~~ 375 (376)
T 3q7m_A 372 YSIT 375 (376)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9886
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.54 E-value=4.6e-12 Score=118.94 Aligned_cols=278 Identities=12% Similarity=0.063 Sum_probs=180.7
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCC-C----CcEEE-EEEeCCCCCCEEEEEec------CCeEEEEEccCCeE
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGH-S----STVNQ-ISFSGPSTPHVLHSCSS------DGTIRAWDTRSFHE 116 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~----~~v~~-i~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~ 116 (389)
++..|++++.|+.|..+|..+|+.+..+..+ . ..+.. .... ++ .++.++. ++.|+.+|..+++.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~---~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KG---KVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TT---EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CC---EEEEEecccccCCCCEEEEEECCCCcE
Confidence 4568888888999999999999998887654 1 11211 1121 33 5555543 79999999999999
Q ss_pred EEEEEcCCCC--------------------------------eEEEEEeCCCCeEEEeecCC------------------
Q 016457 117 VWSVTAGSQE--------------------------------IFCFSFGGSTDYLLAAGCGS------------------ 146 (389)
Q Consensus 117 ~~~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~d~------------------ 146 (389)
+..+...... ...++++|.++.++++..++
T Consensus 203 ~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~ 282 (677)
T 1kb0_A 203 KWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYL 282 (677)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTT
T ss_pred EEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeee
Confidence 9988754211 12578888888888877653
Q ss_pred -eEEEEECcCCceeeeeeeccc--------CCeeEEEEecCCC--CeEEEEeCCCcEEEEecCCCCCCCccc-------e
Q 016457 147 -QIQFWDWRNKKQVACLEESHV--------EDVTQVHFVPNNQ--NKVVSASVDGLICTFDTGGDINDDDLL-------E 208 (389)
Q Consensus 147 -~i~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~ 208 (389)
.|..+|.++++.+..++..+. .....+....+|+ ..++.++.+|.++++|..+++...... .
T Consensus 283 ~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~ 362 (677)
T 1kb0_A 283 ASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWAS 362 (677)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred EEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCccc
Confidence 599999999999887762221 1222333334552 278999999999999999774210000 0
Q ss_pred eeeccCCc------------------------eeeEEEecCCCcEEEEEec-----------------------------
Q 016457 209 SVINVGTS------------------------VGKVGFFGETNKHLWCLTH----------------------------- 235 (389)
Q Consensus 209 ~~~~~~~~------------------------i~~~~~~~~~~~~l~~~~~----------------------------- 235 (389)
.+.....+ -..++++ ++..++++...
T Consensus 363 ~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~d-p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 441 (677)
T 1kb0_A 363 GYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFN-PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN 441 (677)
T ss_dssp EECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEE-TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred ccCCCCceeeccccCcCCCccEECcCcccccCCCCceEc-CCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence 00000000 1257788 45556665443
Q ss_pred --------------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 236 --------------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 236 --------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
.+.|..||+.+++.+-.+... ..+....+...+. +++.++.||.+++||..
T Consensus 442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-------------~~~~~g~~~~~g~--~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-------------SPWNGGTLTTAGN--VVFQGTADGRLVAYHAA 506 (677)
T ss_dssp CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-------------SSCCCCEEEETTT--EEEEECTTSEEEEEETT
T ss_pred cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-------------CCCcCcceEeCCC--EEEEECCCCcEEEEECC
Confidence 268999999999988777532 3344455666677 66778999999999999
Q ss_pred cCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCcee-EEEecC----------------CCeEEEEeccCC
Q 016457 302 YGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIF-GWTGGE----------------DGRLCCWLSDDS 361 (389)
Q Consensus 302 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~-l~s~~~----------------dg~v~iW~~~~~ 361 (389)
+++. +..+..++.....-+ .|..+|+. ++..+. .+.+..|.+...
T Consensus 507 tG~~------lw~~~~~~~~~~~p~---------~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~ 568 (677)
T 1kb0_A 507 TGEK------LWEAPTGTGVVAAPS---------TYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGK 568 (677)
T ss_dssp TCCE------EEEEECSSCCCSCCE---------EEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCB
T ss_pred CCce------eeeeeCCCCcccCCE---------EEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecccc
Confidence 9887 666654433222333 56677764 333221 468899998843
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=3.1e-12 Score=121.02 Aligned_cols=243 Identities=12% Similarity=0.060 Sum_probs=156.4
Q ss_pred ceEEEeecCCCCeEEEEec-----CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCC----------
Q 016457 40 YVFEIVPKNDWSLMAVSLS-----TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDG---------- 104 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg---------- 104 (389)
.+..++|||||++||.+.+ ...|++||+.+|+.+.... +......++|+ |+ +.|+.+..+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg--~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GN--EGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TT--TEEEEEESSCCC-------C
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CC--CEEEEEEecCcccccccccC
Confidence 5788899999999986543 2479999999998654311 11113578999 98 6788777764
Q ss_pred ---eEEEEEccCCeE--EEEEEc---CCCCeEEEEEeCCCCeEEEeec----CCeEEEEECcCCc-eeeeeeecccCCee
Q 016457 105 ---TIRAWDTRSFHE--VWSVTA---GSQEIFCFSFGGSTDYLLAAGC----GSQIQFWDWRNKK-QVACLEESHVEDVT 171 (389)
Q Consensus 105 ---~i~iwd~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~-~~~~~~~~~~~~v~ 171 (389)
.|.+|++.++.. ...+.. +...+.++.|+|++++++.... .+.|+++|+.++. ....+. .+.....
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~ 284 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADV 284 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceE
Confidence 399999876542 223332 3345788999999998876554 3589999998764 345555 4555555
Q ss_pred EEEEecCCCCeEEEEeCC---CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe-cCC--cEEEEEcC
Q 016457 172 QVHFVPNNQNKVVSASVD---GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT-HIE--TLSIWDWK 245 (389)
Q Consensus 172 ~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~--~i~i~d~~ 245 (389)
.. +++++..+++....+ +.|..+|+.++. ......+..+...+. .|+ ++++.|+... .++ .|++|++.
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~--~~~~~~l~~~~~~~~--~~s-~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG--PAHWRDLIPERQQVL--TVH-SGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCC--GGGCEEEECCCSSCE--EEE-EETTEEEEEEEETTEEEEEEECTT
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC--ccccEEEecCCCCEE--EEE-EECCEEEEEEEECCeeEEEEEECC
Confidence 54 566665355555443 579999998542 112234455555544 677 4455555544 454 78899987
Q ss_pred CCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC--CceEEEEEeccCCc
Q 016457 246 DGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG--AGTVGYFPVNYGGA 305 (389)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~--dg~i~i~~~~~~~~ 305 (389)
.+ ....+... ....+..+.++++++.+++...+. -+.|+.||+.+++.
T Consensus 359 g~-~~~~l~~p-----------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 GK-RVREVALP-----------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SC-EEEEECCS-----------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CC-eeEEeecC-----------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 44 34443321 335677888889888655443332 27899999887654
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.52 E-value=2.1e-12 Score=111.18 Aligned_cols=263 Identities=10% Similarity=0.034 Sum_probs=169.5
Q ss_pred eEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe----------cCCeEEEEEccCCeEEEEEEcCC------
Q 016457 61 VVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS----------SDGTIRAWDTRSFHEVWSVTAGS------ 124 (389)
Q Consensus 61 ~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~------ 124 (389)
.|.++|..+++.+..+..-..+ .+.++|++ +.++++. .++.|.+||+.+++.+.++..+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg--~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSG--SDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTS--SCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCC--CEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccccc
Confidence 8899999999999998765556 79999999 5666665 46889999999999999987541
Q ss_pred -CCeEEEEEeCCCCeEEEeec--CCeEEE--EECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCC
Q 016457 125 -QEIFCFSFGGSTDYLLAAGC--GSQIQF--WDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGG 199 (389)
Q Consensus 125 -~~v~~~~~~~~~~~l~~~~~--d~~i~i--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 199 (389)
.....++++|++++++++.. +..|.+ +|+.+ +.++.. ... +.+.|++...+++.+.|+.+.+.|+.+
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--ASC---FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--SSC---CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--CCc---eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 34568999999999999875 467888 99887 455541 111 224466655777778899999999885
Q ss_pred -----CCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCc--eeEEeecccc-cccCCccCCCCCc
Q 016457 200 -----DINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQ--NVASFENARS-LASDSWTLDDVDY 271 (389)
Q Consensus 200 -----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~ 271 (389)
+.........+.....+. . .+. +..++..+. +.+.+.|..... .+..+..... .....| ....
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~-~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~---~p~g 265 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANY-PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNF---RSAG 265 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETT-TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTE---EECS
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-ccc-CCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccc---ccCc
Confidence 210000000011112232 3 434 444555555 899999986532 2222211000 000000 0111
Q ss_pred eeeecccCCCCeEEEEEe-c-C-----CceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCcee-
Q 016457 272 FVDCHYPGEGENLWVIGG-T-G-----AGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIF- 343 (389)
Q Consensus 272 i~~~~~~~~~~~~~l~~g-~-~-----dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~- 343 (389)
...+.++|+++++|++.. . . ++.+.++|+.+.+. +..+..+. ....+ +|++||++
T Consensus 266 ~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v------v~~i~vg~--~p~gi---------~~s~Dg~~l 328 (368)
T 1mda_H 266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT------SGPISNGH--DSDAI---------IAAQDGASD 328 (368)
T ss_dssp SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE------EECCEEEE--EECEE---------EECCSSSCE
T ss_pred ceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE------EEEEECCC--CcceE---------EECCCCCEE
Confidence 222679999997766544 2 2 23466999999876 56665332 56777 99999984
Q ss_pred EEEec-CCCeEEEEeccCC
Q 016457 344 GWTGG-EDGRLCCWLSDDS 361 (389)
Q Consensus 344 l~s~~-~dg~v~iW~~~~~ 361 (389)
+++.. .++.|.++|+...
T Consensus 329 ~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEEETTTTEEEEEESSSC
T ss_pred EEEccCCCCeEEEEECCCC
Confidence 56665 5999999999876
No 218
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=6e-11 Score=100.24 Aligned_cols=231 Identities=10% Similarity=0.057 Sum_probs=147.7
Q ss_pred CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce
Q 016457 79 HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ 158 (389)
Q Consensus 79 ~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 158 (389)
...--.+..|++++. .++++...++.|..||..+++. ..+.. ...+.++++++++. ++++. ++.|.+||..+++.
T Consensus 11 ~~~~~Egp~w~~~~~-~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~~~~~i~~~~dG~-l~v~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSN-SLLFVDIPAKKVCRWDSFTKQV-QRVTM-DAPVSSVALRQSGG-YVATI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTT-EEEEEETTTTEEEEEETTTCCE-EEEEC-SSCEEEEEEBTTSS-EEEEE-TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCC-EEEEEECCCCEEEEEECCCCcE-EEEeC-CCceEEEEECCCCC-EEEEE-CCeEEEEECCCCcE
Confidence 334556889998652 5677777789999999987765 33443 47899999998887 44444 57899999987764
Q ss_pred eeeeeec---ccCCeeEEEEecCCCCeEEEEeCC---------CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 159 VACLEES---HVEDVTQVHFVPNNQNKVVSASVD---------GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 159 ~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
....... ....++.++++|+|. ++++.... ..-.+|.+... ...............++|+ ++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~~~~~~~~~~pngi~~s-pd 159 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD----HHVKKYFDQVDISNGLDWS-LD 159 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT----SCEEEEEEEESBEEEEEEC-TT
T ss_pred EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC----CCEEEEeeccccccceEEc-CC
Confidence 3322200 123478899999995 66554321 22344444321 1122233333456789999 56
Q ss_pred CcEE-EEEecCCcEEEEEc--CCCcee--EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 227 NKHL-WCLTHIETLSIWDW--KDGQNV--ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 227 ~~~l-~~~~~d~~i~i~d~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
++.| ++.+.++.|.+|++ .++... ..+.... .+......++++++|+ +.++...++.|..||..
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~---------~~~~~p~g~~~d~~G~--lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE---------KEEQIPDGMCIDAEGK--LWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC---------GGGCEEEEEEEBTTSC--EEEEEETTTEEEEECTT
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC---------CCCCCCCeeEECCCCC--EEEEEcCCCEEEEEcCC
Confidence 6655 55666789999997 455432 1121110 0224567899999986 55666667889999998
Q ss_pred cCCccccCCCeEEEecccceeeeeccCCCcccCCCCC-CCceeEEEe
Q 016457 302 YGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQ-SHGIFGWTG 347 (389)
Q Consensus 302 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s-~~~~~l~s~ 347 (389)
+++. +..+. .+...++++ +|. |+++.|+.+
T Consensus 229 tG~~------~~~i~-~p~~~~t~~---------~f~g~d~~~L~vt 259 (297)
T 3g4e_A 229 TGKR------LQTVK-LPVDKTTSC---------CFGGKNYSEMYVT 259 (297)
T ss_dssp TCCE------EEEEE-CSSSBEEEE---------EEESGGGCEEEEE
T ss_pred CceE------EEEEE-CCCCCceEE---------EEeCCCCCEEEEE
Confidence 7775 55555 555677888 887 777655443
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=2.3e-12 Score=110.97 Aligned_cols=250 Identities=13% Similarity=0.000 Sum_probs=163.8
Q ss_pred eEEEEecC--ceeeeeec-CcceEEEeecCCCCeEEEEe----------cCCeEEEEeCCCceeeeeecCC-------CC
Q 016457 22 SIKRFGLK--NSIQTNFG-DDYVFEIVPKNDWSLMAVSL----------STNVVKLYSPVTGQYSGECKGH-------SS 81 (389)
Q Consensus 22 ~i~~w~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~-------~~ 81 (389)
+|.++|.. +.+.++.. ..+ .++++||+++++++. .++.|.+||+.+++.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 77888875 45555554 444 799999999999886 3689999999999999887533 12
Q ss_pred cEEEEEEeCCCCCCEEEEEec--CCeEEE--EEccCCeEEEEEEcCCCCeEEEEEeCCCCe-EEEeecCCeEEEEECcC-
Q 016457 82 TVNQISFSGPSTPHVLHSCSS--DGTIRA--WDTRSFHEVWSVTAGSQEIFCFSFGGSTDY-LLAAGCGSQIQFWDWRN- 155 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~- 155 (389)
....++++|++ ++++++.. +..|.+ +|+.+ +..+.... . ..+.|.+.. +++.+.|+.+.+.|+.+
T Consensus 125 ~P~~ia~SpDG--k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~ 195 (368)
T 1mda_H 125 RVHIIGNCASS--ACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C---FHIHPGAAATHYLGSCPASLAASDLAAA 195 (368)
T ss_dssp CTTSEEECTTS--SCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C---CCCEEEETTEEECCCCTTSCEEEECCSS
T ss_pred CcceEEEcCCC--CEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c---eEEccCCCeEEEEEcCCCCEEEEECccc
Confidence 35689999999 67777764 467888 99877 55555321 1 122344444 44455588888899886
Q ss_pred ----Cceee----eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-------cc---CCce
Q 016457 156 ----KKQVA----CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-------NV---GTSV 217 (389)
Q Consensus 156 ----~~~~~----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~~---~~~i 217 (389)
++... .+. -...+. . .+++. .++..+. +.+.+.|+.+... ..+..+. .. ....
T Consensus 196 ~~~~~~v~~~~t~~i~-vg~~P~---~-~~~~~-~~~~vs~-~~V~viD~~~~~~--~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 196 PAAAGIVGAQCTGAQN-CSSQAA---Q-ANYPG-MLVWAVA-SSILQGDIPAAGA--TMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp CCCCEECCCCSCTTSC-BCSCCE---E-ETTTT-EEEECBS-SCCEEEECCSSCC--EEECCCCSSCTHHHHTTEEECSS
T ss_pred cccCCeEEEEeeeeee-CCCCcc---c-cccCC-EEEEEcC-CEEEEEECCCCcc--eEEEEEEeccccccccccccCcc
Confidence 44331 121 112333 3 66664 6666666 9999999974311 1111110 00 1112
Q ss_pred eeEEEecCCCcEEEEEec---------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEE
Q 016457 218 GKVGFFGETNKHLWCLTH---------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIG 288 (389)
Q Consensus 218 ~~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 288 (389)
..++++ ++++.++++.. ++.+.++|+.+.+.+..+... .....+.|+|+|+.+|++.
T Consensus 267 ~~v~~s-~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-------------~~p~gi~~s~Dg~~l~va~ 332 (368)
T 1mda_H 267 QMVAKL-KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-------------HDSDAIIAAQDGASDNYAN 332 (368)
T ss_dssp SCEEEE-TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-------------EEECEEEECCSSSCEEEEE
T ss_pred eeeEEc-CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-------------CCcceEEECCCCCEEEEEc
Confidence 226788 56666665432 235669999999998888753 3578899999998654444
Q ss_pred ecCCceEEEEEeccCCc
Q 016457 289 GTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 289 g~~dg~i~i~~~~~~~~ 305 (389)
...++.|.++|+.+.+.
T Consensus 333 ~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 333 SAGTEVLDIYDAASDQD 349 (368)
T ss_dssp ETTTTEEEEEESSSCEE
T ss_pred cCCCCeEEEEECCCCcE
Confidence 43689999999999876
No 220
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.50 E-value=1.1e-11 Score=116.35 Aligned_cols=284 Identities=12% Similarity=0.032 Sum_probs=180.2
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCCCc-----------EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSST-----------VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----------v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
+..|++++.++.|.-+|..+|+.+..+...... ...+++. + ..|+.++.|+.|..+|..+++.+.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~--~~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--K--GKVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--T--TEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--C--CEEEEEcCCCEEEEEECCCCCEEe
Confidence 457777887899999999999998877543210 1223332 3 478888999999999999999999
Q ss_pred EEEcC-C----CCeEE-EEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeeccc-------------------
Q 016457 119 SVTAG-S----QEIFC-FSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEESHV------------------- 167 (389)
Q Consensus 119 ~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~------------------- 167 (389)
.+..+ . ..+.+ ... .++.+++++. ++.|+.+|.++++.+.++.....
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 98865 2 12221 122 2566776654 68999999999999877752110
Q ss_pred ------------CCeeEEEEecCCCCeEEEEeCCC-------------------cEEEEecCCCCCCCccceeee--ccC
Q 016457 168 ------------EDVTQVHFVPNNQNKVVSASVDG-------------------LICTFDTGGDINDDDLLESVI--NVG 214 (389)
Q Consensus 168 ------------~~v~~~~~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~~~~--~~~ 214 (389)
.....++++|++. +++.++.++ .|..+|.++++ .+-.+. .+.
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~----~~W~~~~~~~d 305 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGK----YKWHYQETPGD 305 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC----EEEEEESSTTC
T ss_pred ccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCC----EEEEEecCCCc
Confidence 0113578899885 888877664 49999998764 121111 111
Q ss_pred -------CceeeEEEecCCC---cEEEEEecCCcEEEEEcCCCceeEEeecccccc------cCC--------------c
Q 016457 215 -------TSVGKVGFFGETN---KHLWCLTHIETLSIWDWKDGQNVASFENARSLA------SDS--------------W 264 (389)
Q Consensus 215 -------~~i~~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------~~~--------------~ 264 (389)
....-+... .++ ..++.++.+|.++++|..+++.+..+......- ... +
T Consensus 306 ~wd~~~~~~p~l~~~~-~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~ 384 (677)
T 1kb0_A 306 NWDYTSTQPMILADIK-IAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQD 384 (677)
T ss_dssp CSCCCCCSCCEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEE
T ss_pred ccccccCCCcEEEecc-cCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccE
Confidence 111112222 245 678999999999999999999887765321000 000 0
Q ss_pred c----CCCCCceeeecccCCCCeEEEEEec-----------------------------------------CCceEEEEE
Q 016457 265 T----LDDVDYFVDCHYPGEGENLWVIGGT-----------------------------------------GAGTVGYFP 299 (389)
Q Consensus 265 ~----~~~~~~i~~~~~~~~~~~~~l~~g~-----------------------------------------~dg~i~i~~ 299 (389)
. .+. ..-..++++|++..+|+.+.. ..|.|..||
T Consensus 385 ~~P~~~G~-~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 385 AVPGPYGA-HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp CSSCTTCS-SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred ECcCcccc-cCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 0 000 001256788888744433221 127899999
Q ss_pred eccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCcc
Q 016457 300 VNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSE 363 (389)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~~ 363 (389)
+.+++. +..+. +..++... .++.++..++.++.||.|++||..++..
T Consensus 464 ~~tG~~------~W~~~--~~~~~~~g---------~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 464 PVAQKA------AWSVE--HVSPWNGG---------TLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp TTTTEE------EEEEE--ESSSCCCC---------EEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCCCcE------EeecC--CCCCCcCc---------ceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 988876 44443 22223333 4556677778889999999999987743
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.50 E-value=1.5e-11 Score=105.55 Aligned_cols=288 Identities=9% Similarity=0.026 Sum_probs=178.9
Q ss_pred cCCCCeEEEEecCc-eeeeeec-CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCC
Q 016457 17 CDNVNSIKRFGLKN-SIQTNFG-DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTP 94 (389)
Q Consensus 17 ~~~~~~i~~w~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 94 (389)
++.++.|..|+... ....... ...+.++...+++. |.+++.+ |..+|. +++.+..+...........+. ++
T Consensus 36 ~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~-- 108 (330)
T 3hxj_A 36 GSSNKNLYAINTDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-ED-- 108 (330)
T ss_dssp SSTTTTTEEECTTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TT--
T ss_pred EcCCCEEEEECCCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CC--
Confidence 34456677777322 2222222 44456777777774 5555544 888886 677666555433333334444 44
Q ss_pred CEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEE
Q 016457 95 HVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVH 174 (389)
Q Consensus 95 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 174 (389)
.++.++.++.|..+|.. ++.......+...+.++...+ ++.+++++.++.|..+|.. ++.+..+. .....+.++.
T Consensus 109 -~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~l~vgt~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~ 183 (330)
T 3hxj_A 109 -ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE-DGTIYVGSNDNYLYAINPD-GTEKWRFK-TNDAITSAAS 183 (330)
T ss_dssp -EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT-TSCEEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCE
T ss_pred -EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC-CCEEEEEcCCCEEEEECCC-CCEeEEEe-cCCCceeeeE
Confidence 78888889999999988 888777776655566677763 5567778888999999998 87777666 4455677788
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
..+++. +..++ +.|..+| .++ ............+.++... +++ .|++++.++.|..+|. +++.+..+.
T Consensus 184 ~d~~g~--l~v~t--~~l~~~d-~~g----~~~~~~~~~~~~~~~~~~~-~~g-~l~v~t~~~gl~~~~~-~g~~~~~~~ 251 (330)
T 3hxj_A 184 IGKDGT--IYFGS--DKVYAIN-PDG----TEKWNFYAGYWTVTRPAIS-EDG-TIYVTSLDGHLYAINP-DGTEKWRFK 251 (330)
T ss_dssp ECTTCC--EEEES--SSEEEEC-TTS----CEEEEECCSSCCCSCCEEC-TTS-CEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred EcCCCE--EEEEe--CEEEEEC-CCC----cEEEEEccCCcceeceEEC-CCC-eEEEEcCCCeEEEECC-CCCEeEEee
Confidence 877763 55555 7899999 433 2222333334567777776 444 5777778888888874 566665554
Q ss_pred cccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccC
Q 016457 255 NARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQG 334 (389)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 334 (389)
... ..+..+.+.+++. |..++.+|.|..+|. +++. +.... .....+.++
T Consensus 252 ~~~------------~~~~~~~~~~~g~---l~v~t~~ggl~~~d~-~g~~------~~~~~-~~~~~~~~~-------- 300 (330)
T 3hxj_A 252 TGK------------RIESSPVIGNTDT---IYFGSYDGHLYAINP-DGTE------KWNFE-TGSWIIATP-------- 300 (330)
T ss_dssp CSS------------CCCSCCEECTTSC---EEEECTTCEEEEECT-TSCE------EEEEE-CSSCCCSCC--------
T ss_pred CCC------------CccccceEcCCCe---EEEecCCCCEEEECC-CCcE------EEEEE-cCCccccce--------
Confidence 321 2233445555553 456777888999985 4443 23332 223334444
Q ss_pred CCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 335 RPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..+++|.+ ..++.+|.+++...+..
T Consensus 301 -~~d~~g~l-~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 301 -VIDENGTI-YFGTRNGKFYALFNLEH 325 (330)
T ss_dssp -EECTTCCE-EEECTTSCEEEEEC---
T ss_pred -EEcCCCEE-EEEcCCCeEEEEecccc
Confidence 55566664 66788999999876643
No 222
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1.4e-12 Score=112.64 Aligned_cols=179 Identities=12% Similarity=0.149 Sum_probs=131.7
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe-----------EEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEE
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH-----------EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQF 150 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 150 (389)
+++.+++++.. .++++|+.++ +.+|++.+.+ ...... +.. |+.++| ++..|+++ .++.|++
T Consensus 39 ~~nlLais~~~--gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSK--SLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTT--TEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCC--CEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 68999999988 6999999885 6679876433 222333 445 999999 77788777 8899999
Q ss_pred EECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEE
Q 016457 151 WDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHL 230 (389)
Q Consensus 151 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 230 (389)
||+++........ .|...+.++.+.+. .+++++.||.|.+||+..+. . . .+...|.+++|+ ++| +
T Consensus 111 ~dv~sl~~~~~~~-~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~----~-~---~~~~~Vs~v~WS-pkG--~ 175 (388)
T 1xip_A 111 LDLEELSEFRTVT-SFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKS----T-K---QLAQNVTSFDVT-NSQ--L 175 (388)
T ss_dssp EESSSTTCEEEEE-ECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCC----E-E---EEEESEEEEEEC-SSE--E
T ss_pred EEchhhhccCccc-eeecceeeEEecCC---CEEEEECCCCEEEEEccCCc----c-c---cccCCceEEEEc-CCc--e
Confidence 9998877655555 67778888777654 38888999999999998542 1 1 144689999999 666 7
Q ss_pred EEEecCCcEEEEEcCCCce--eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEE
Q 016457 231 WCLTHIETLSIWDWKDGQN--VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIG 288 (389)
Q Consensus 231 ~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 288 (389)
+.+..||.+++|+...+.. .+++.....+... .+|...|.++.|.+++. ++++
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~---~~~~~~V~sI~wl~~~~--flv~ 230 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEEL---PVEEYSPLSVTILSPQD--FLAV 230 (388)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCHHHHTS---CTTTSEEEEEEESSSSE--EEEE
T ss_pred EEEEcCCcEEEEcCCCccccccceecCCcccccc---cCCCeeEEEEEEecCCe--EEEE
Confidence 8899999999999887765 5556332211100 01568899999999877 6554
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=5.5e-12 Score=119.36 Aligned_cols=243 Identities=11% Similarity=0.008 Sum_probs=152.9
Q ss_pred CCCcEEEEEEeCCCCCCEEEEE-----ecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCC-------
Q 016457 79 HSSTVNQISFSGPSTPHVLHSC-----SSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS------- 146 (389)
Q Consensus 79 ~~~~v~~i~~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 146 (389)
|...+..++|+|++ ++|+.+ +....|++||+.+++.+... .+......++|+ +++.|+.+..+.
T Consensus 127 ~~~~l~~~~~SpDg--~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDG--RILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTS--SEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCC--CEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCccccccc
Confidence 55678899999999 677642 23357999999999865431 111123567899 999999888763
Q ss_pred ------eEEEEECcCCce----eeeeeec-ccCCeeEEEEecCCCCeEEEEeC---CCcEEEEecCCCCCCCccceeeec
Q 016457 147 ------QIQFWDWRNKKQ----VACLEES-HVEDVTQVHFVPNNQNKVVSASV---DGLICTFDTGGDINDDDLLESVIN 212 (389)
Q Consensus 147 ------~i~iwd~~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~ 212 (389)
.|++|++.+... +.... . |...+..+.|+|+++.++++.+. .+.|+++|+.++. .....+..
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~---~~~~~l~~ 278 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAI-PAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN---APLLTVQG 278 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCS-GGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT---CCCEEEEC
T ss_pred ccCCCcEEEEEECCCCcccceEEEecC-CCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC---CceEEEeC
Confidence 499999887643 22222 2 34457889999999733344432 2589999998542 12444444
Q ss_pred cCCceeeEEEecCCCcEEEEEecC---CcEEEEEcCCCce--eEEeecccccccCCccCCCCCceeeecccCCCCeEEEE
Q 016457 213 VGTSVGKVGFFGETNKHLWCLTHI---ETLSIWDWKDGQN--VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVI 287 (389)
Q Consensus 213 ~~~~i~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 287 (389)
+....... ++++++.+++....+ +.|..+|+.++.. ...+.. |...+. .|+++++.+ ++
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~------------~~~~~~--~~s~~g~~l-v~ 342 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP------------ERQQVL--TVHSGSGYL-FA 342 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC------------CCSSCE--EEEEETTEE-EE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec------------CCCCEE--EEEEECCEE-EE
Confidence 54444444 553555555555544 5799999987654 234443 223444 888988842 33
Q ss_pred EecCCc--eEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC----CeEEEEeccCC
Q 016457 288 GGTGAG--TVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED----GRLCCWLSDDS 361 (389)
Q Consensus 288 ~g~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d----g~v~iW~~~~~ 361 (389)
+...++ .|++|++..+.. ..+...+...+..+ .+++++..|+....+ +.|..|++...
T Consensus 343 ~~~~~g~~~l~~~d~~g~~~-------~~l~~p~~~~~~~~---------~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKRV-------REVALPGLGSVSGF---------NGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEEETTEEEEEEECTTSCEE-------EEECCSSSSEEEEC---------CCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EEEECCeeEEEEEECCCCee-------EEeecCCCceEEee---------ecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 333444 688888875432 44432334556666 778887766554433 78888888654
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=2.7e-11 Score=102.77 Aligned_cols=231 Identities=10% Similarity=0.024 Sum_probs=149.1
Q ss_pred eeeeec-CcceEEEeecCCCC-eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 32 IQTNFG-DDYVFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 32 ~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
+..+.. ........|+|+++ +++++..++.|..|+. +++ ...+..+...+..+++.+++ +++++...++.|.+|
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG--~l~v~~~~~~~v~~~ 112 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQ--RLVHCEHGRRAITRS 112 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTS--CEEEEETTTTEEEEE
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCC--CEEEEECCCCEEEEE
Confidence 333433 55667899999998 6667777899999997 454 34455566778999999998 566555556789999
Q ss_pred EccCCeEEEEEEcC-----CCCeEEEEEeCCCCeEEE----eec-------------CCeEEEEECcCCceeeeeeeccc
Q 016457 110 DTRSFHEVWSVTAG-----SQEIFCFSFGGSTDYLLA----AGC-------------GSQIQFWDWRNKKQVACLEESHV 167 (389)
Q Consensus 110 d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~ 167 (389)
+.. ++.. .+... ...+..++++|++..+++ +.. .+.|..+|..+++..... ..
T Consensus 113 ~~~-g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~ 187 (305)
T 3dr2_A 113 DAD-GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DL 187 (305)
T ss_dssp CTT-SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EE
T ss_pred CCC-CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cC
Confidence 986 5533 22211 234678999988776664 221 256888887666543322 23
Q ss_pred CCeeEEEEecCCCCeEEEEeCC------CcEEEEecCCCCCCCccceee-eccCCceeeEEEecCCCcEEEEEecCCcEE
Q 016457 168 EDVTQVHFVPNNQNKVVSASVD------GLICTFDTGGDINDDDLLESV-INVGTSVGKVGFFGETNKHLWCLTHIETLS 240 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~ 240 (389)
.....++|+|++. .|+.+... +.|.+|++.... ......+ .........+++. ++++ |++++.+ .|.
T Consensus 188 ~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d-~~G~-lwv~~~~-gv~ 261 (305)
T 3dr2_A 188 DHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVD-RGGW-LWSSSGT-GVC 261 (305)
T ss_dssp SSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEEC-TTSC-EEECCSS-EEE
T ss_pred CCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEEC-CCCC-EEEecCC-cEE
Confidence 4567899999996 66666554 689999987431 0001111 1123445678888 6676 5555544 599
Q ss_pred EEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc
Q 016457 241 IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG 293 (389)
Q Consensus 241 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg 293 (389)
+|+. +++.+..+... ..+..++|+++++.+ ..++.++
T Consensus 262 ~~~~-~g~~~~~~~~~-------------~~~~~~~f~~d~~~L--~it~~~~ 298 (305)
T 3dr2_A 262 VFDS-DGQLLGHIPTP-------------GTASNCTFDQAQQRL--FITGGPC 298 (305)
T ss_dssp EECT-TSCEEEEEECS-------------SCCCEEEECTTSCEE--EEEETTE
T ss_pred EECC-CCCEEEEEECC-------------CceeEEEEeCCCCEE--EEEcCCe
Confidence 9998 57777666542 347889999888844 4444444
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=5.3e-11 Score=102.72 Aligned_cols=241 Identities=8% Similarity=-0.031 Sum_probs=155.4
Q ss_pred cceEEEeecCCCCeEEEEec--CCeEEEEeCCCceeeeee-------cCCCCcEEEEEEeCCCCCCEEEEEec-----CC
Q 016457 39 DYVFEIVPKNDWSLMAVSLS--TNVVKLYSPVTGQYSGEC-------KGHSSTVNQISFSGPSTPHVLHSCSS-----DG 104 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~-------~~~~~~v~~i~~~~~~~~~~l~s~~~-----dg 104 (389)
..+..++++++|+++++... ++.++||.+.+++.. .+ ..|...+..+++.+++ .++++-.. ++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g--~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNG--IVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSS--EEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCC--cEEEEcCCCCcCCCC
Confidence 57889999999988887642 343555555455533 22 2355689999999988 45554333 57
Q ss_pred eEEEEEccCCeEEEEEEcC------CCCeEEEEEeCCCCeEEEee----cCCeEEEEECcCCceeeeeeecc--------
Q 016457 105 TIRAWDTRSFHEVWSVTAG------SQEIFCFSFGGSTDYLLAAG----CGSQIQFWDWRNKKQVACLEESH-------- 166 (389)
Q Consensus 105 ~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~-------- 166 (389)
.|.+||+.+++.+..+..+ ...+..++++++++.++++. .++.|.+||+.+++....+. .|
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~-~~~~~~~~~~ 172 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ-GYPGIAPEDI 172 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT-TCTTTSCCSC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec-CCCccccccc
Confidence 8999999999988777653 23568999998766766654 46899999998776554442 21
Q ss_pred ---------------------cCCeeEEEEecCCCCeEEEEeCCC-cEEEEecCC---CCCCC-ccc--eeeeccCCcee
Q 016457 167 ---------------------VEDVTQVHFVPNNQNKVVSASVDG-LICTFDTGG---DINDD-DLL--ESVINVGTSVG 218 (389)
Q Consensus 167 ---------------------~~~v~~~~~~~~~~~~l~~~~~d~-~i~i~d~~~---~~~~~-~~~--~~~~~~~~~i~ 218 (389)
...+..|+|+|+++ .|+.+..++ .+..++... +.... ... ....++.....
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 02357899999996 777766555 565555421 00000 000 01223344567
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEE
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYF 298 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~ 298 (389)
.++++ +++.++++...++.|.+||..+++....... . +.....+++|.+++. ++++.+..+.+.+|
T Consensus 252 gia~d-~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~-~----------~~~~p~~va~~~~g~--l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 252 GISID-KDHNIYVGDLAHSAIGVITSADRAYKLLVTD-E----------KLSWTDSFNFGSDGY--LYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEC-TTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-G----------GGSCEEEEEECTTSC--EEEEECCGGGSGGG
T ss_pred eEEEC-CCCCEEEEccCCCeEEEEECCCCCEEEEEEC-C----------ceecCCeeEECCCCc--EEEEeCcccccccc
Confidence 89998 6788888888899999999856654332221 1 225678899998876 44555444444333
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.48 E-value=1.2e-10 Score=101.89 Aligned_cols=263 Identities=11% Similarity=-0.010 Sum_probs=167.9
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCC---------CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGH---------SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---------~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 119 (389)
++..+++++.++.|..+|.++|+.+..+... ...+.+.....+ ..++.++.++.|..+|..+++.+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG---GHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET---TEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC---CEEEEEcCCCEEEEEECCCCCEEEE
Confidence 3567888888999999999999988766542 122322222223 3788888999999999999999988
Q ss_pred EEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCe-----eEEEEecCCCCeEEEEeCCCcEEE
Q 016457 120 VTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDV-----TQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 120 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
............. .++.+++++.++.|..+|.++++.+.... ...... ...... + ..++.++.++.+..
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVN-LDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSA 202 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE-CCC-----CCCCCCEEE--T-TEEEECCTTTEEEE
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEe-CCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEE
Confidence 8765332222233 35688888889999999999999887776 221111 222232 2 27888888999999
Q ss_pred EecCCCCCCCccceeeeccC--C--------ce-eeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCC
Q 016457 195 FDTGGDINDDDLLESVINVG--T--------SV-GKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDS 263 (389)
Q Consensus 195 ~d~~~~~~~~~~~~~~~~~~--~--------~i-~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 263 (389)
+|..++.. +-...... . .+ ...... +..+++++.++.+..+|..+++.+.....
T Consensus 203 ~d~~tG~~----~w~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-------- 267 (376)
T 3q7m_A 203 VLMEQGQM----IWQQRISQATGSTEIDRLSDVDTTPVVV---NGVVFALAYNGNLTALDLRSGQIMWKREL-------- 267 (376)
T ss_dssp EETTTCCE----EEEEECCC-----------CCCCCCEEE---TTEEEEECTTSCEEEEETTTCCEEEEECC--------
T ss_pred EECCCCcE----EEEEecccCCCCcccccccccCCCcEEE---CCEEEEEecCcEEEEEECCCCcEEeeccC--------
Confidence 99986631 11111100 0 01 111222 34678888899999999999988766542
Q ss_pred ccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCcee
Q 016457 264 WTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIF 343 (389)
Q Consensus 264 ~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~ 343 (389)
.....+.. ++. .|..++.++.|..+|..+++. +..........+... . ..+..
T Consensus 268 ------~~~~~~~~--~~~--~l~~~~~~g~l~~~d~~tG~~------~w~~~~~~~~~~~~~---------~--~~~~~ 320 (376)
T 3q7m_A 268 ------GSVNDFIV--DGN--RIYLVDQNDRVMALTIDGGVT------LWTQSDLLHRLLTSP---------V--LYNGN 320 (376)
T ss_dssp ------CCEEEEEE--ETT--EEEEEETTCCEEEEETTTCCE------EEEECTTTTSCCCCC---------E--EETTE
T ss_pred ------CCCCCceE--ECC--EEEEEcCCCeEEEEECCCCcE------EEeecccCCCcccCC---------E--EECCE
Confidence 12233333 245 456667789999999998875 333221111111111 1 12345
Q ss_pred EEEecCCCeEEEEeccCCc
Q 016457 344 GWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 344 l~s~~~dg~v~iW~~~~~~ 362 (389)
|+.++.+|.|.+++..+..
T Consensus 321 l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 321 LVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEECTTSEEEEEETTTCC
T ss_pred EEEEeCCCeEEEEECCCCc
Confidence 6788889999999988763
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.47 E-value=2.3e-11 Score=114.47 Aligned_cols=262 Identities=12% Similarity=0.082 Sum_probs=165.9
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCC--CCcEEEEEEeC---CCCCCEEEEEe------cCCeEEEEEccCCeEE
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGH--SSTVNQISFSG---PSTPHVLHSCS------SDGTIRAWDTRSFHEV 117 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~v~~i~~~~---~~~~~~l~s~~------~dg~i~iwd~~~~~~~ 117 (389)
++..|++++.|+.|..+|..+|+.+..+... ......+..+| ++ .++.++ .+|.|..||..+|+.+
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g---~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG---KVVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT---EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC---EEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 3557888989999999999999998776542 11111111111 44 455543 3789999999999999
Q ss_pred EEEEcCC-C------------------------------CeEEEEEeCCCCeEEEeecCC-------------------e
Q 016457 118 WSVTAGS-Q------------------------------EIFCFSFGGSTDYLLAAGCGS-------------------Q 147 (389)
Q Consensus 118 ~~~~~~~-~------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~ 147 (389)
..+.... . ....++++|..+.++++..++ .
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 8887310 0 012578888888888887765 3
Q ss_pred EEEEECcCCceeeeeeec-cc-------CCeeEEEEecCCC--CeEEEEeCCCcEEEEecCCCCCCCc----c---ceee
Q 016457 148 IQFWDWRNKKQVACLEES-HV-------EDVTQVHFVPNNQ--NKVVSASVDGLICTFDTGGDINDDD----L---LESV 210 (389)
Q Consensus 148 i~iwd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~----~---~~~~ 210 (389)
|..+|.++++.+..+... |. .++.......++. ..++.++.+|.++++|.++++.... . ...+
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 999999999999887622 21 1122222222331 2688899999999999998752100 0 0000
Q ss_pred e-----------------ccC-----------CceeeEEEecCCCcEEEEEec---------------------------
Q 016457 211 I-----------------NVG-----------TSVGKVGFFGETNKHLWCLTH--------------------------- 235 (389)
Q Consensus 211 ~-----------------~~~-----------~~i~~~~~~~~~~~~l~~~~~--------------------------- 235 (389)
. ... ..-..++++| +..++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp-~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNP-DTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEET-TTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECC-CCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 0 000 0112377884 4445555422
Q ss_pred ------------------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEE
Q 016457 236 ------------------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGY 297 (389)
Q Consensus 236 ------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i 297 (389)
+|.|..||+.+++.+-.+... .......+...+. +++.|+.||.|+.
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-------------~~~~~g~~~tagg--lvf~gt~dg~l~a 500 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV-------------TIFNGGTLSTAGN--LVFEGSADGRVIA 500 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES-------------SSCCCCEEEETTT--EEEEECTTSEEEE
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC-------------CCccCccceECCC--EEEEECCCCcEEE
Confidence 377999999999988777642 2233334555666 7788999999999
Q ss_pred EEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeE
Q 016457 298 FPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFG 344 (389)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l 344 (389)
||..+++. +.++..++.....-+ .|..+|+..
T Consensus 501 ~D~~tG~~------lw~~~~~~~~~~~p~---------ty~~~G~qy 532 (689)
T 1yiq_A 501 YAADTGEK------LWEQPAASGVMAAPV---------TYSVDGEQY 532 (689)
T ss_dssp EETTTCCE------EEEEECSSCCCSCCE---------EEEETTEEE
T ss_pred EECCCCcc------ceeeeCCCCcccCce---------EEEECCEEE
Confidence 99999887 666653333222334 666777643
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=3.9e-11 Score=112.89 Aligned_cols=282 Identities=12% Similarity=0.091 Sum_probs=175.3
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCCCc----------E-EEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSST----------V-NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~----------v-~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
+..+++++.++.|.-+|..+|+.+..+...... + ..++.. + ..++.++.|+.|..+|..+|+.+.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~---g~v~v~~~dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-K---GKVYVGVLDGRLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-T---TEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-C---CEEEEEccCCEEEEEECCCCCEee
Confidence 557788888899999999999998887543221 0 112232 3 488889999999999999999998
Q ss_pred EEEcC-C-CCeEEEEEeC--CCCeEEEeec------CCeEEEEECcCCceeeeeeecc----------------------
Q 016457 119 SVTAG-S-QEIFCFSFGG--STDYLLAAGC------GSQIQFWDWRNKKQVACLEESH---------------------- 166 (389)
Q Consensus 119 ~~~~~-~-~~v~~~~~~~--~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~---------------------- 166 (389)
.+... . .....+...| .++.+++++. ++.|..||.++++.+.++....
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred eecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 88763 1 1101111111 2456666543 6899999999999887765110
Q ss_pred --------cCCeeEEEEecCCCCeEEEEeCCCc-------------------EEEEecCCCCCCCccceeeec--cC---
Q 016457 167 --------VEDVTQVHFVPNNQNKVVSASVDGL-------------------ICTFDTGGDINDDDLLESVIN--VG--- 214 (389)
Q Consensus 167 --------~~~v~~~~~~~~~~~~l~~~~~d~~-------------------i~i~d~~~~~~~~~~~~~~~~--~~--- 214 (389)
......++++|++. +++.++.++. |..+|.++++. +-.+.. +.
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~----~W~~~~~~~d~wd 300 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY----VWHYQTTPGDAWD 300 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE----EEEEESSTTCCSC
T ss_pred eeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce----eEeeecCCccccc
Confidence 01113578899885 8888887763 99999997742 222211 11
Q ss_pred ----CceeeEEEecCCCc---EEEEEecCCcEEEEEcCCCceeEEeecccccccCCccC--------------------C
Q 016457 215 ----TSVGKVGFFGETNK---HLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTL--------------------D 267 (389)
Q Consensus 215 ----~~i~~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--------------------~ 267 (389)
.++.-.... .+++ .++.++.+|.++++|..+++.+....... ..|.. .
T Consensus 301 ~~~~~~~~l~d~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~----~~w~~~~~~~~~~pi~~~~~~~~~~~ 375 (689)
T 1yiq_A 301 YTATQHMILAELP-IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVP----QSWTKGMDMKTGRPILDEENAAYWKN 375 (689)
T ss_dssp CCCCSCEEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC----CSSEEEEETTTTEEEECHHHHCTTTS
T ss_pred ccCCCCcEEEeec-cCCcEEEEEEEECCCCeEEEEECCCCCEeccccccc----cccccccCccCCCcccchhhccccCC
Confidence 111111111 2343 78899999999999999999875543211 00100 0
Q ss_pred C-----------CCceeeecccCCCCeEEEEEec-------------------------------------------CCc
Q 016457 268 D-----------VDYFVDCHYPGEGENLWVIGGT-------------------------------------------GAG 293 (389)
Q Consensus 268 ~-----------~~~i~~~~~~~~~~~~~l~~g~-------------------------------------------~dg 293 (389)
. ...-..++|+|+...+|+.+.. .+|
T Consensus 376 ~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g 455 (689)
T 1yiq_A 376 GKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSG 455 (689)
T ss_dssp SSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEE
T ss_pred CCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcce
Confidence 0 0011236788887743332211 147
Q ss_pred eEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCc
Q 016457 294 TVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 294 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~ 362 (389)
.|+.||+.+++. +..+. .+ .++..- .++..+..++.|+.||.|+.||..++.
T Consensus 456 ~l~A~D~~tG~~------~W~~~-~~-~~~~~g---------~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 456 KLIAWDPVKQQA------AWEVP-YV-TIFNGG---------TLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEETTTTEE------EEEEE-ES-SSCCCC---------EEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eEEEEECCCCCe------EeEcc-CC-CCccCc---------cceECCCEEEEECCCCcEEEEECCCCc
Confidence 899999988876 44443 22 122221 345566678889999999999998773
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=1.6e-10 Score=97.97 Aligned_cols=239 Identities=8% Similarity=0.018 Sum_probs=148.6
Q ss_pred eeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEE
Q 016457 73 SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWD 152 (389)
Q Consensus 73 ~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 152 (389)
+..+...........|.+++. .++++...++.|..|+. +++ ...+..+...+..+++++++..+++...++.|..||
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~-~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQR-TLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGT-EEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred eEEEecCCcCccCCeEeCCCC-EEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 334444455678899999982 36777778899999998 454 345555667899999998776444444468899999
Q ss_pred CcCCceeeeeee--c-ccCCeeEEEEecCCCCeEEE----EeC-------------CCcEEEEecCCCCCCCccceeeec
Q 016457 153 WRNKKQVACLEE--S-HVEDVTQVHFVPNNQNKVVS----ASV-------------DGLICTFDTGGDINDDDLLESVIN 212 (389)
Q Consensus 153 ~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~ 212 (389)
.. ++....... + ....+..++++|+|. ++++ |.. .+.|+.||..++. +....
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-----~~~~~- 185 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-----LQRMA- 185 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-----CEEEE-
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-----EEEEe-
Confidence 75 543221110 1 123467899999995 7775 332 2567778775432 22222
Q ss_pred cCCceeeEEEecCCCcEEEEEecC------CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEE
Q 016457 213 VGTSVGKVGFFGETNKHLWCLTHI------ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 213 ~~~~i~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 286 (389)
.......++|+ ++++.|+++... +.|.+|++..+. +......... .......++++++|+ +.
T Consensus 186 ~~~~p~gl~~s-pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~--------~~~~pdgi~~d~~G~--lw 253 (305)
T 3dr2_A 186 DLDHPNGLAFS-PDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV--------PDGLPDGFCVDRGGW--LW 253 (305)
T ss_dssp EESSEEEEEEC-TTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC--------SSSCCCSEEECTTSC--EE
T ss_pred cCCCCcceEEc-CCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC--------CCCCCCeEEECCCCC--EE
Confidence 33456789999 677777766654 689999987654 2111100000 123456788999987 33
Q ss_pred EEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEE
Q 016457 287 IGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLC 354 (389)
Q Consensus 287 ~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~ 354 (389)
++ +.+| |.+|+.. ++. +..+. .+. .+..+ +|+++++.|+.++.++..+
T Consensus 254 v~-~~~g-v~~~~~~-g~~------~~~~~-~~~-~~~~~---------~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 254 SS-SGTG-VCVFDSD-GQL------LGHIP-TPG-TASNC---------TFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EC-CSSE-EEEECTT-SCE------EEEEE-CSS-CCCEE---------EECTTSCEEEEEETTEEEE
T ss_pred Ee-cCCc-EEEECCC-CCE------EEEEE-CCC-ceeEE---------EEeCCCCEEEEEcCCeEEE
Confidence 33 3444 9999885 332 34444 222 35666 8889988888777665433
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.42 E-value=6.3e-10 Score=95.25 Aligned_cols=224 Identities=10% Similarity=-0.037 Sum_probs=139.8
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeee
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVAC 161 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 161 (389)
-....+|+|++. .++++...++.|..||..+++.. .+.. ...+.+++++|++..++ ++. ..|.+||..+++....
T Consensus 50 ~~egp~~~~~~~-~l~~~d~~~~~i~~~d~~~~~~~-~~~~-~~~v~~i~~~~dg~l~v-~~~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASG-TAWWFNILERELHELHLASGRKT-VHAL-PFMGSALAKISDSKQLI-ASD-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTT-EEEEEEGGGTEEEEEETTTTEEE-EEEC-SSCEEEEEEEETTEEEE-EET-TEEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCC-EEEEEECCCCEEEEEECCCCcEE-EEEC-CCcceEEEEeCCCeEEE-EEC-CCEEEEECCCCcEEEE
Confidence 345778999753 56777777889999999877643 3443 46799999997765554 444 4599999887765332
Q ss_pred eeec---ccCCeeEEEEecCCCCeEEEEeC------CCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEE-
Q 016457 162 LEES---HVEDVTQVHFVPNNQNKVVSASV------DGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLW- 231 (389)
Q Consensus 162 ~~~~---~~~~v~~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~- 231 (389)
.... ....+..++++|+|. ++++... .+.|..++ . +. ...+.........++|+ ++++.++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~-~-g~-----~~~~~~~~~~~~~i~~s-~dg~~lyv 195 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA-K-GK-----VTKLFADISIPNSICFS-PDGTTGYF 195 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE-T-TE-----EEEEEEEESSEEEEEEC-TTSCEEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe-C-Cc-----EEEeeCCCcccCCeEEc-CCCCEEEE
Confidence 2100 123588999999995 6555432 24566666 3 21 22222233456789999 6676554
Q ss_pred EEecCCcEEEEEcC--CC-cee--EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCcc
Q 016457 232 CLTHIETLSIWDWK--DG-QNV--ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAA 306 (389)
Q Consensus 232 ~~~~d~~i~i~d~~--~~-~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~ 306 (389)
+.+.++.|.+|++. ++ ... ..+.... ........++++++|. +.++...++.|.+|+.. ++.
T Consensus 196 ~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~---------~~~~~p~gi~~d~~G~--lwva~~~~~~v~~~d~~-g~~- 262 (326)
T 2ghs_A 196 VDTKVNRLMRVPLDARTGLPTGKAEVFIDST---------GIKGGMDGSVCDAEGH--IWNARWGEGAVDRYDTD-GNH- 262 (326)
T ss_dssp EETTTCEEEEEEBCTTTCCBSSCCEEEEECT---------TSSSEEEEEEECTTSC--EEEEEETTTEEEEECTT-CCE-
T ss_pred EECCCCEEEEEEcccccCCcccCceEEEECC---------CCCCCCCeeEECCCCC--EEEEEeCCCEEEEECCC-CCE-
Confidence 44557899999986 55 321 1221100 0224567788999886 44555456789999883 443
Q ss_pred ccCCCeEEEecccceeeeeccCCCcccCCCCC-CCceeEEEe
Q 016457 307 TIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQ-SHGIFGWTG 347 (389)
Q Consensus 307 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s-~~~~~l~s~ 347 (389)
+..+. .+...+.++ +|+ +++..|+.+
T Consensus 263 -----~~~i~-~~~~~~~~~---------af~g~d~~~L~vt 289 (326)
T 2ghs_A 263 -----IARYE-VPGKQTTCP---------AFIGPDASRLLVT 289 (326)
T ss_dssp -----EEEEE-CSCSBEEEE---------EEESTTSCEEEEE
T ss_pred -----EEEEE-CCCCCcEEE---------EEecCCCCEEEEE
Confidence 34444 445567788 887 777655443
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.38 E-value=2e-13 Score=118.90 Aligned_cols=188 Identities=12% Similarity=-0.010 Sum_probs=108.9
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCC-Ce
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ-EI 127 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~v 127 (389)
++..+++++.|+.|+.||..+|+.+..+.. +.+.+..+..++ ..+++++.||.|+.||..+++.+..+..+.. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g--~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE--PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC--CEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 567899999999999999999999988875 455555555566 5788888999999999999888766654311 11
Q ss_pred E-EEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCcc
Q 016457 128 F-CFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDL 206 (389)
Q Consensus 128 ~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 206 (389)
. +..+. .++.+++++.++.|+.||.++++.+..+. .+. ...++|++. .+++++.|+.|+.||.+++....
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~-~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~tG~~~W-- 154 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLS-SAF----ADSLSPSTS-LLYLGRTEYTITMYDTKTRELRW-- 154 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC----------------------------EEEEEEEEEEECCCSSSSSCCC--
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEec-CCC----cccccccCC-EEEEEecCCEEEEEECCCCCEEE--
Confidence 0 01111 35677778889999999999999988876 332 234566664 88889999999999999764221
Q ss_pred ceeeeccCCceeeEEEecCC---CcEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 207 LESVINVGTSVGKVGFFGET---NKHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
..... .....++. .+ ...+++++.++.|+.||..+++.+-.+.
T Consensus 155 --~~~~~--~~~~~~~~-~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 155 --NATYF--DYAASLPE-DDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp --EEEEE--EECCBCCC-CCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred --eEecc--cccCcccc-CCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 11111 11222232 21 1457788899999999999998877665
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=8.6e-13 Score=114.96 Aligned_cols=181 Identities=11% Similarity=0.055 Sum_probs=106.0
Q ss_pred CEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeeccc-CCee-E
Q 016457 95 HVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHV-EDVT-Q 172 (389)
Q Consensus 95 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~v~-~ 172 (389)
..+++++.||.|..||..+|+.+..+.. ..+.+..+..++..+++++.|+.|+.||.++++.+..+. .+. ..+. +
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~-~~~~~~~~~s 86 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP-FTIPELVQAS 86 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS-CCHHHHHTTC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee-ccCccccccC
Confidence 5899999999999999999999999887 445444455456566666789999999999988776654 221 1111 1
Q ss_pred EEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEE
Q 016457 173 VHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVAS 252 (389)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 252 (389)
..+. .+. .+++++.++.|+.||..++.. +..+..+. ...++ +++..+++++.++.|+.||..+++.+..
T Consensus 87 p~~~-~~~-~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~-p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 87 PCRS-SDG-ILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLS-PSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp SCC-------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred ceEe-cCC-EEEEEeCCCEEEEEECCCCcE----EEEecCCC----ccccc-ccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 1111 232 677888899999999997742 22221111 12344 3667888999999999999999987766
Q ss_pred eecccccccCCccCCCCCceeeecccCCC---CeEEEEEecCCceEEEEEeccCCc
Q 016457 253 FENARSLASDSWTLDDVDYFVDCHYPGEG---ENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+.... .....+..+. . .++.++.||.|+.||..+++.
T Consensus 156 ~~~~~--------------~~~~~~~~~~~~~~--~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 156 ATYFD--------------YAASLPEDDVDYKM--SHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp EEEEE--------------ECCBCCCCCTTCCC--CEEEEETSCEEEEECTTTCCE
T ss_pred Eeccc--------------ccCccccCCccccc--eEEEECCCCEEEEEECCCCcE
Confidence 54311 1223333321 3 356678899999999998876
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.36 E-value=7.6e-10 Score=95.88 Aligned_cols=232 Identities=13% Similarity=0.124 Sum_probs=146.0
Q ss_pred CCCCeEEEE-ecCCeEEEEeCCCc----eeeeeec------C-CCCcEEEEEEeCCCCCCEEEEEecC------CeEEEE
Q 016457 48 NDWSLMAVS-LSTNVVKLYSPVTG----QYSGECK------G-HSSTVNQISFSGPSTPHVLHSCSSD------GTIRAW 109 (389)
Q Consensus 48 ~~~~~l~~~-~~d~~i~iw~~~~~----~~~~~~~------~-~~~~v~~i~~~~~~~~~~l~s~~~d------g~i~iw 109 (389)
+++++|++. ..++.|.++|+.+. +..+.+. . -...-..+...|++ +++++..+ |.|.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG---i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA---IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC---EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe---EEEEcCCCcCCCCCCeEEEE
Confidence 777777665 44789999998754 5555552 0 11245667788887 66676655 789999
Q ss_pred EccCCeEEEEEEcCCC---CeEEEEEeCCCCeEEEee-------------------cCCeEEEEECcCCceeeeeeec-c
Q 016457 110 DTRSFHEVWSVTAGSQ---EIFCFSFGGSTDYLLAAG-------------------CGSQIQFWDWRNKKQVACLEES-H 166 (389)
Q Consensus 110 d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~d~~i~iwd~~~~~~~~~~~~~-~ 166 (389)
|..+++.+.++..... .-..+-|+|+++.++++. .+..|.+||+.+++.+.++..+ .
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 9999999998874322 234588899999888884 2689999999998888888732 2
Q ss_pred cCCeeEEEE--ecCCCCeEEEEe------CCCcEEEEecCCCCCCCcccee--eec----------------cCCceeeE
Q 016457 167 VEDVTQVHF--VPNNQNKVVSAS------VDGLICTFDTGGDINDDDLLES--VIN----------------VGTSVGKV 220 (389)
Q Consensus 167 ~~~v~~~~~--~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~--~~~----------------~~~~i~~~ 220 (389)
......|.| +|+++ ++.+++ .++.|.+|....+. ...... +.. .......+
T Consensus 250 g~~P~~i~f~~~Pdg~-~aYV~~e~~~~~Lss~V~v~~~d~g~--~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 250 NRMALELRPLHDPTKL-MGFINMVVSLKDLSSSIWLWFYEDGK--WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp EEEEEEEEECSSTTCC-EEEEEEEEETTTCCEEEEEEEEETTE--EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCccceeEeeECCCCC-EEEEEEeeeccCCCceEEEEEecCCc--eeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 234456656 99997 555544 56788776654321 011110 000 02457788
Q ss_pred EEecCCCcEEEEEec-CCcEEEEEcCCC---ceeEEeecccccccCCcc--CCCCCceeeecccCCCCeEEE
Q 016457 221 GFFGETNKHLWCLTH-IETLSIWDWKDG---QNVASFENARSLASDSWT--LDDVDYFVDCHYPGEGENLWV 286 (389)
Q Consensus 221 ~~~~~~~~~l~~~~~-d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l 286 (389)
.++ +++++|+++.. .+.|.+||+.+. +.+..+..........+. ..-...-..+.++|+|+.+|+
T Consensus 327 ~lS-~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyV 397 (462)
T 2ece_A 327 DIS-LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYV 397 (462)
T ss_dssp EEC-TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEE
T ss_pred EEC-CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEE
Confidence 999 67777776665 679999998633 444444332100000000 000123578899999995433
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.33 E-value=9.4e-09 Score=85.24 Aligned_cols=231 Identities=9% Similarity=-0.026 Sum_probs=140.8
Q ss_pred CeEEEEecCCeEEEEeCCCceee-----eeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCC
Q 016457 51 SLMAVSLSTNVVKLYSPVTGQYS-----GECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQ 125 (389)
Q Consensus 51 ~~l~~~~~d~~i~iw~~~~~~~~-----~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 125 (389)
.+|+.+. .+.|+.++++..... ..+......+..++|.+++. .++++-..++.|..+++........+.....
T Consensus 2 ~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQ-TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDK-VVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEE-EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTT-EEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEc-CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCC-EEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 3555555 357888888754321 11222234578999998652 4555555678999999876554333333335
Q ss_pred CeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC--CCcEEEEecCCCCC
Q 016457 126 EIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV--DGLICTFDTGGDIN 202 (389)
Q Consensus 126 ~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~ 202 (389)
....++++|.++.++.+.. .+.|.++++..... ..+..........++++|++..++++... .+.|..+++....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 7889999987788777765 68999999864332 22221222457899999976434444433 4688888887321
Q ss_pred CCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCC
Q 016457 203 DDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEG 281 (389)
Q Consensus 203 ~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 281 (389)
...+. ..-.....+++++.++.++++....+.|.++|+........+... .....++.. +
T Consensus 158 ----~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-------------~~P~gi~~d--~ 218 (267)
T 1npe_A 158 ----RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-------------QYPFAVTSY--G 218 (267)
T ss_dssp ----CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-------------CSEEEEEEE--T
T ss_pred ----cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC-------------CCceEEEEe--C
Confidence 11111 122457889999444555566666789999998754333322211 223455543 4
Q ss_pred CeEEEEEecCCceEEEEEeccCCc
Q 016457 282 ENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 282 ~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+.+ .++....+.|.+++..+++.
T Consensus 219 ~~l-yva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 219 KNL-YYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp TEE-EEEETTTTEEEEEETTTTEE
T ss_pred CEE-EEEECCCCeEEEEeCCCCCc
Confidence 543 34555668899999987765
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.32 E-value=3.1e-10 Score=101.73 Aligned_cols=245 Identities=8% Similarity=0.042 Sum_probs=166.9
Q ss_pred CCCCeEEEEec-CCeEEEEeCCCceeeeeecC-CCCcEEEEEE-e-CCCCCCEEEEEe------------------cCCe
Q 016457 48 NDWSLMAVSLS-TNVVKLYSPVTGQYSGECKG-HSSTVNQISF-S-GPSTPHVLHSCS------------------SDGT 105 (389)
Q Consensus 48 ~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~-~-~~~~~~~l~s~~------------------~dg~ 105 (389)
+||+++++... ++.|.+.|+.+.+....+.- .......+++ . |++ .++++++ .++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~--~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS--NYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC--SEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC--cEEEEecccccccCCCCcccccccccCce
Confidence 38888887765 56799999999987774432 2345788888 4 788 6777774 3468
Q ss_pred EEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCC--------------------------------------e
Q 016457 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGS--------------------------------------Q 147 (389)
Q Consensus 106 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------------------------------~ 147 (389)
+.+.|..+.+...++.... ....++++|+++++++++.+. .
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999999999988643 567788999999999988532 4
Q ss_pred EEEEECcC--Cce-eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCC-------CCCccceeeeccCCce
Q 016457 148 IQFWDWRN--KKQ-VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDI-------NDDDLLESVINVGTSV 217 (389)
Q Consensus 148 i~iwd~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~~~~~i 217 (389)
|.+.|.++ ++. +..+. -.....++.++|+|+..++++..+.+|.++|+.+.. .....+..........
T Consensus 256 V~VID~~~~~~~~~~~~Ip--vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIP--IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp EEEEECSGGGCCSSEEEEE--EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred EEEEeCcccCCceeEEEEe--cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 67777776 444 44554 345678899999998556666678999999999431 0111122233345677
Q ss_pred eeEEEecCCCcEEEEEecCCcEEEEEcCC----------CceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEE
Q 016457 218 GKVGFFGETNKHLWCLTHIETLSIWDWKD----------GQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVI 287 (389)
Q Consensus 218 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 287 (389)
..++|+ +++...++.-.|++|.+||+.. .+.+..+..+.. .+|........++|||+.++.+
T Consensus 334 ~h~aF~-~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yq-------pGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 334 LHTAFD-GRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQ-------PGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp EEEEEC-TTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSC-------EEEEEETTTTSTTCCSSEEEEE
T ss_pred ceEEEC-CCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccc-------cccceeccceEeCCCCCEEEEc
Confidence 899999 6676566677799999999876 445556554321 0132333556789999943333
Q ss_pred EecC-Cce----------EEEEEeccCCc
Q 016457 288 GGTG-AGT----------VGYFPVNYGGA 305 (389)
Q Consensus 288 ~g~~-dg~----------i~i~~~~~~~~ 305 (389)
.... |.. -.++|+..++.
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 3333 442 28899976654
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.31 E-value=8.3e-10 Score=94.61 Aligned_cols=219 Identities=12% Similarity=0.028 Sum_probs=153.1
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFC 129 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 129 (389)
+..|.+++.++.|..+|.. ++....+..+...+.++...+++ .++.++.++.|..+|.. ++.+..+......+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g---~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG---TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS---CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC---EEEEEcCCCEEEEECCC-CCEeEEEecCCCceee
Confidence 4577888889999999988 87777666555666777777666 57778888999999998 8888887766666777
Q ss_pred EEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCcccee
Q 016457 130 FSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLES 209 (389)
Q Consensus 130 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 209 (389)
+...++ +.+++++ +.|..+| .+++.+..+. .....+.++...+++ .+..++.++.+..+|.... .+..
T Consensus 182 ~~~d~~-g~l~v~t--~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~~g~-----~~~~ 249 (330)
T 3hxj_A 182 ASIGKD-GTIYFGS--DKVYAIN-PDGTEKWNFY-AGYWTVTRPAISEDG--TIYVTSLDGHLYAINPDGT-----EKWR 249 (330)
T ss_dssp CEECTT-CCEEEES--SSEEEEC-TTSCEEEEEC-CSSCCCSCCEECTTS--CEEEEETTTEEEEECTTSC-----EEEE
T ss_pred eEEcCC-CEEEEEe--CEEEEEC-CCCcEEEEEc-cCCcceeceEECCCC--eEEEEcCCCeEEEECCCCC-----EeEE
Confidence 777644 4565555 8899999 7777776665 445668888888886 4666777888988875421 2233
Q ss_pred eeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe
Q 016457 210 VINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG 289 (389)
Q Consensus 210 ~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g 289 (389)
.......+..+.+. .++ .|++++.++.|..+|. +++.+..+.. ....+.++...+++. |..|
T Consensus 250 ~~~~~~~~~~~~~~-~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~------------~~~~~~~~~~d~~g~---l~~g 311 (330)
T 3hxj_A 250 FKTGKRIESSPVIG-NTD-TIYFGSYDGHLYAINP-DGTEKWNFET------------GSWIIATPVIDENGT---IYFG 311 (330)
T ss_dssp EECSSCCCSCCEEC-TTS-CEEEECTTCEEEEECT-TSCEEEEEEC------------SSCCCSCCEECTTCC---EEEE
T ss_pred eeCCCCccccceEc-CCC-eEEEecCCCCEEEECC-CCcEEEEEEc------------CCccccceEEcCCCE---EEEE
Confidence 33233334445554 344 6788888989999996 6776666553 224456666667765 4568
Q ss_pred cCCceEEEEEeccC
Q 016457 290 TGAGTVGYFPVNYG 303 (389)
Q Consensus 290 ~~dg~i~i~~~~~~ 303 (389)
+.+|.+++...+..
T Consensus 312 t~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 312 TRNGKFYALFNLEH 325 (330)
T ss_dssp CTTSCEEEEEC---
T ss_pred cCCCeEEEEecccc
Confidence 89999998877643
No 237
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.31 E-value=2.2e-08 Score=83.01 Aligned_cols=242 Identities=7% Similarity=-0.050 Sum_probs=151.6
Q ss_pred CCeEEEEecCcee-------eeeec-CcceEEEeecCCCCeEEEEe-cCCeEEEEeCCCceeeeeecCCCCcEEEEEEeC
Q 016457 20 VNSIKRFGLKNSI-------QTNFG-DDYVFEIVPKNDWSLMAVSL-STNVVKLYSPVTGQYSGECKGHSSTVNQISFSG 90 (389)
Q Consensus 20 ~~~i~~w~~~~~~-------~~~~~-~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~ 90 (389)
.+.|+.+++.... ..+.. ...+..++|++++..|+.+. .++.|..++...+.....+.........+++.+
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~ 88 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDH 88 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEET
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEe
Confidence 3467777775321 11222 35678999999766666554 468999999876544333332335678999998
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec---CCeEEEEECcCCceeeeeeeccc
Q 016457 91 PSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC---GSQIQFWDWRNKKQVACLEESHV 167 (389)
Q Consensus 91 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~ 167 (389)
++. .++++-...+.|.++++........+.........++++|.++.++.+.. .+.|..+++.. .....+.....
T Consensus 89 ~~~-~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~ 166 (267)
T 1npe_A 89 LGR-TIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNL 166 (267)
T ss_dssp TTT-EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTC
T ss_pred cCC-eEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCC
Confidence 652 45555556778999998643322222222356789999987888877765 36888888763 33333321223
Q ss_pred CCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCC
Q 016457 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
.....++++|++..++++-...+.|.++|+.+.. ...+.........++.. ++.++++....+.|..+|..++
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~-----~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG-----RRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE-----EEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTT
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc-----eEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCC
Confidence 4578999999875455666667899999997421 11222222334566654 4445555556689999999999
Q ss_pred ceeEEeecccccccCCccCCCCCceeeecccCCC
Q 016457 248 QNVASFENARSLASDSWTLDDVDYFVDCHYPGEG 281 (389)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 281 (389)
+.+..+.... ......+++.|++
T Consensus 240 ~~~~~i~~g~-----------~~~p~gi~~~~~~ 262 (267)
T 1npe_A 240 KEMDTFHPHK-----------QTRLYGITIALSQ 262 (267)
T ss_dssp EEEEEECCSS-----------CCCCCCEEEECSC
T ss_pred CceEEEcccc-----------ccccceeeecCcc
Confidence 8888876421 1235566666665
No 238
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=7.7e-10 Score=95.44 Aligned_cols=237 Identities=9% Similarity=0.027 Sum_probs=145.5
Q ss_pred CcEEEEEEeCCCCCCEEEEEe--cCCeEEEEEccCCeEEEEEE-------cCCCCeEEEEEeCCCCeEEEeec------C
Q 016457 81 STVNQISFSGPSTPHVLHSCS--SDGTIRAWDTRSFHEVWSVT-------AGSQEIFCFSFGGSTDYLLAAGC------G 145 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~------d 145 (389)
.....+++++++ +++++.. .++.++||.+.+++.. .+. .+-..+.++++++++. |+++.. +
T Consensus 17 ~~p~~va~~~~g--~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDG--RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTS--CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSC
T ss_pred CCcceEEECCCC--CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCC
Confidence 678899999998 6777753 2343566666555432 221 2346789999997754 555432 5
Q ss_pred CeEEEEECcCCceeeeeeec-----ccCCeeEEEEecCCCCeEEEEe---CCCcEEEEecCCCCCCCcc----------c
Q 016457 146 SQIQFWDWRNKKQVACLEES-----HVEDVTQVHFVPNNQNKVVSAS---VDGLICTFDTGGDINDDDL----------L 207 (389)
Q Consensus 146 ~~i~iwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~----------~ 207 (389)
+.|.+||+.+++.+..+... +...+..+++++++...+++.. .++.|.+||+.++...... .
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 79999999998877666511 2235689999986543556555 6789999998754210000 0
Q ss_pred -eeeec--------------cCCceeeEEEecCCCcEEEEEecCC-cEEEEEcC---CCce--------eEEeecccccc
Q 016457 208 -ESVIN--------------VGTSVGKVGFFGETNKHLWCLTHIE-TLSIWDWK---DGQN--------VASFENARSLA 260 (389)
Q Consensus 208 -~~~~~--------------~~~~i~~~~~~~~~~~~l~~~~~d~-~i~i~d~~---~~~~--------~~~~~~~~~~~ 260 (389)
....+ ....+..++++ ++++.|+.+...+ .+..++.. .+.. +..+ +
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s-~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g----- 245 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLD-AENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-S----- 245 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEEC-TTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-E-----
T ss_pred ceeECCEEEEeccCCCceeceecccceeEec-cCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-c-----
Confidence 00000 01235789999 6777777776665 55555431 1110 0111 1
Q ss_pred cCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec-ccceeeeeccCCCcccCCCCCC
Q 016457 261 SDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG-GHTAVVRSVLPMPSVQGRPAQS 339 (389)
Q Consensus 261 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~s~ 339 (389)
+......++++++|. +.++...++.|.+|+..+++. ..+.. .+.....++ +|++
T Consensus 246 -------~~g~pdgia~d~~G~--l~va~~~~~~V~~~d~~~G~~-------~~~~~~~~~~~p~~v---------a~~~ 300 (343)
T 2qe8_A 246 -------EKPICDGISIDKDHN--IYVGDLAHSAIGVITSADRAY-------KLLVTDEKLSWTDSF---------NFGS 300 (343)
T ss_dssp -------ECCSCSCEEECTTCC--EEEEEGGGTEEEEEETTTTEE-------EEEEECGGGSCEEEE---------EECT
T ss_pred -------cCCCCceEEECCCCC--EEEEccCCCeEEEEECCCCCE-------EEEEECCceecCCee---------EECC
Confidence 223456789999987 677888889999999844443 22221 123456677 8888
Q ss_pred CceeEEEecCCCeE
Q 016457 340 HGIFGWTGGEDGRL 353 (389)
Q Consensus 340 ~~~~l~s~~~dg~v 353 (389)
++.++++.+..+.+
T Consensus 301 ~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 301 DGYLYFDCNQLHHS 314 (343)
T ss_dssp TSCEEEEECCGGGS
T ss_pred CCcEEEEeCccccc
Confidence 88877777654444
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.29 E-value=1.9e-09 Score=96.76 Aligned_cols=242 Identities=12% Similarity=0.000 Sum_probs=155.9
Q ss_pred CCCCCEEEEE-ecCCeEEEEEccCCeEEEEEEcC-CCCeEEEEE-e-CCCCeEEEeec------------------CCeE
Q 016457 91 PSTPHVLHSC-SSDGTIRAWDTRSFHEVWSVTAG-SQEIFCFSF-G-GSTDYLLAAGC------------------GSQI 148 (389)
Q Consensus 91 ~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~~------------------d~~i 148 (389)
++ ++++.. ..++.|.+.|+.+.+....+... ......+++ + |+++++++++. ++.+
T Consensus 100 DG--~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 100 DG--RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EE--EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CC--CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 55 455554 45667999999999988866643 356888888 4 89999999851 4689
Q ss_pred EEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC--------------------------------------
Q 016457 149 QFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG-------------------------------------- 190 (389)
Q Consensus 149 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-------------------------------------- 190 (389)
.++|..+.+.+.++.-+ .....++++|+|+ ++++.+.+.
T Consensus 178 tvID~~t~~v~~qI~Vg--g~pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVS--GNLDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEETTTTEEEEEEEES--SCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEEECCCCeEEEEEEeC--CCccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 99999999988888722 2457788999996 777766442
Q ss_pred cEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe-cCCcEEEEEcCCCc------------eeEEeeccc
Q 016457 191 LICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT-HIETLSIWDWKDGQ------------NVASFENAR 257 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~------------~~~~~~~~~ 257 (389)
.|.+.|.++.. ...............++.++ |+++++++++ .+.+|.++|+.+.+ ......
T Consensus 255 ~V~VID~~~~~--~~~~~~~Ipvg~~PhGv~~s-PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--- 328 (595)
T 1fwx_A 255 GVKVVDGRKEA--SSLFTRYIPIANNPHGCNMA-PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--- 328 (595)
T ss_dssp TEEEEECSGGG--CCSSEEEEEEESSCCCEEEC-TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB---
T ss_pred cEEEEeCcccC--CceeEEEEecCCCceEEEEc-CCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC---
Confidence 35666666310 11212233334466788999 6777666555 57899999998653 122222
Q ss_pred ccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc----cccCCCeEEEecccceeeeeccCCCccc
Q 016457 258 SLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA----ATIGPPEAVLVGGHTAVVRSVLPMPSVQ 333 (389)
Q Consensus 258 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 333 (389)
-......++|+++| .+ .++.-.|+.|.+|++..... ....+.+.++. .|-.+-.... ..
T Consensus 329 ----------vG~gP~h~aF~~dG-~a-Y~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid-V~yqpGh~~~----~~ 391 (595)
T 1fwx_A 329 ----------LGLGPLHTAFDGRG-NA-YTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD-VHYQPGHLKT----VM 391 (595)
T ss_dssp ----------CCSCEEEEEECTTS-EE-EEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-CSSCEEEEEE----TT
T ss_pred ----------CCCCcceEEECCCC-eE-EEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-ccccccccee----cc
Confidence 22567889999999 54 45677899999999987210 00012245554 3322111000 01
Q ss_pred CCCCCCCceeEEEec---CCCeE----------EEEeccC
Q 016457 334 GRPAQSHGIFGWTGG---EDGRL----------CCWLSDD 360 (389)
Q Consensus 334 ~~~~s~~~~~l~s~~---~dg~v----------~iW~~~~ 360 (389)
...++|||++|+++. .|..+ .++++..
T Consensus 392 g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 392 GETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp TTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred ceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 127899999998863 35432 7788753
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.27 E-value=6.7e-09 Score=84.56 Aligned_cols=219 Identities=8% Similarity=0.030 Sum_probs=145.7
Q ss_pred ceeeeeecCCCC--cEEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCeEEEEEEcCCC-CeEEEEEeCCCCeEEEeec
Q 016457 70 GQYSGECKGHSS--TVNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 70 ~~~~~~~~~~~~--~v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~ 144 (389)
.+.+.++. |.. ....+.|++++ .++++.+. ++.|+++|+.+++.+..+..... ....+++. ++.++.+..
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~dg--~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~ 83 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAEND--TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVW 83 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECSTT--EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEET
T ss_pred ceEEEEEE-CCCCCCcccEEEeCCC--eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEe
Confidence 34555664 443 35799999876 45555543 57999999999999998875422 33456665 567777765
Q ss_pred -CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc--CC---cee
Q 016457 145 -GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV--GT---SVG 218 (389)
Q Consensus 145 -d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~---~i~ 218 (389)
++.+.++|..+.+.+.++..+ .. ....+.++++ .++++..++.|.++|..+.. ....+... .. .++
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~--~g~glt~Dg~-~l~vs~gs~~l~viD~~t~~----v~~~I~Vg~~~~p~~~~n 155 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MK--DGWGLATDGK-ILYGSDGTSILYEIDPHTFK----LIKKHNVKYNGHRVIRLN 155 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SS--SCCEEEECSS-SEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEE
T ss_pred cCCEEEEEECCCCcEEEEEECC-CC--CeEEEEECCC-EEEEECCCCeEEEEECCCCc----EEEEEEECCCCcccccce
Confidence 899999999999999988722 12 2244566776 55556678899999998542 23333211 11 356
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccC-CccCCCCCceeeecccCCCCeEEEEEecCCceEEE
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASD-SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGY 297 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i 297 (389)
.+.|. ++..++....++.|.+.|..+++.+..+......... .-..........++|+|+++++ ++++...+.|.+
T Consensus 156 ele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l-fVTgk~~~~v~~ 232 (266)
T 2iwa_A 156 ELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI-FVTGKLWPKLFE 232 (266)
T ss_dssp EEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE-EEEETTCSEEEE
T ss_pred eEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE-EEECCCCCeEEE
Confidence 77776 4555555556789999999999999888742100000 0000011356899999998874 578888899999
Q ss_pred EEeccCC
Q 016457 298 FPVNYGG 304 (389)
Q Consensus 298 ~~~~~~~ 304 (389)
.++....
T Consensus 233 i~l~~~~ 239 (266)
T 2iwa_A 233 IKLHLVR 239 (266)
T ss_dssp EEEEECC
T ss_pred EEEeccc
Confidence 9987643
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.24 E-value=8.7e-09 Score=96.72 Aligned_cols=280 Identities=10% Similarity=0.069 Sum_probs=172.5
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCCCc----------E-EEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSST----------V-NQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~----------v-~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
+..+++++.++.|.-+|..+|+.+..+...... + ..+++. + ..++.++.|+.|..+|..+|+.+.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-G---DKVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-B---TEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-C---CEEEEEcCCCEEEEEECCCCCEee
Confidence 457777888999999999999998877543211 0 122332 2 378888899999999999999999
Q ss_pred EEEcCC----CCeEE-EEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeec--cc------------------
Q 016457 119 SVTAGS----QEIFC-FSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEES--HV------------------ 167 (389)
Q Consensus 119 ~~~~~~----~~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~--~~------------------ 167 (389)
.+.... ..+.+ ..+ .++.++++.. +|.|..+|.++++.+.++... ..
T Consensus 142 ~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 887631 11111 111 2456666654 489999999999998877511 00
Q ss_pred ----------CCeeEEEEecCCCCeEEEEeCCC-------------------cEEEEecCCCCCCCccceeeec--cC--
Q 016457 168 ----------EDVTQVHFVPNNQNKVVSASVDG-------------------LICTFDTGGDINDDDLLESVIN--VG-- 214 (389)
Q Consensus 168 ----------~~v~~~~~~~~~~~~l~~~~~d~-------------------~i~i~d~~~~~~~~~~~~~~~~--~~-- 214 (389)
.....+++.|+.. +++.++.++ .|..+|.++++ .+-.... |.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~----~~W~~~~~~~~~w 294 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK----LAWHYQVTPGDSW 294 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC----EEEEEESSTTCCS
T ss_pred cceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc----eeeEeecCCCccc
Confidence 1112478888875 888887766 38999998774 1212211 11
Q ss_pred -----CceeeEEEecCCCc---EEEEEecCCcEEEEEcCCCceeEEeecccccccCCccC-----------------CC-
Q 016457 215 -----TSVGKVGFFGETNK---HLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTL-----------------DD- 268 (389)
Q Consensus 215 -----~~i~~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-----------------~~- 268 (389)
.+.....+. .+++ .++.++.+|.++++|..+++.+....... ..|.. ..
T Consensus 295 d~~~~~~~~~~d~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~----~~w~~~~d~~~g~p~~~~~~~~~~~ 369 (668)
T 1kv9_A 295 DFTATQQITLAELN-IDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGK----VTWAEKVDLATGRPVEAPGVRYEKE 369 (668)
T ss_dssp CCCCCSCEEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC----CCSEEEECTTTCCEEECTTTTCSSS
T ss_pred cccCCCCcEEEEec-cCCcEEEEEEEECCCCEEEEEECCCCCEeccccccc----cccccccccccCCccccccccccCC
Confidence 122222222 2443 68889999999999999999885543221 00100 00
Q ss_pred ----------CCceeeecccCCCCeEEEEE----------------------------------ecCCceEEEEEeccCC
Q 016457 269 ----------VDYFVDCHYPGEGENLWVIG----------------------------------GTGAGTVGYFPVNYGG 304 (389)
Q Consensus 269 ----------~~~i~~~~~~~~~~~~~l~~----------------------------------g~~dg~i~i~~~~~~~ 304 (389)
...-..++++|+...+|+-+ ...+|.|..||..+++
T Consensus 370 ~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~ 449 (668)
T 1kv9_A 370 PIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK 449 (668)
T ss_dssp CEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE
T ss_pred eeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc
Confidence 00011256777766443311 1234889999998887
Q ss_pred ccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCc
Q 016457 305 AATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSS 362 (389)
Q Consensus 305 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~ 362 (389)
. +.+.. +..++... .....+.+++.++.||.|+.||...+.
T Consensus 450 ~------~W~~~--~~~~~~~~---------~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 450 A------AWKVP--YPTHWNGG---------TLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp E------EEEEE--ESSSCCCC---------EEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred E------EEEcc--CCCCCcCc---------eeEeCCCEEEEECCcccchhhhhhcCh
Confidence 6 33333 11112211 233456667888999999999998763
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.24 E-value=8.9e-09 Score=83.83 Aligned_cols=205 Identities=10% Similarity=0.015 Sum_probs=139.6
Q ss_pred eeeeeecC--cceEEEeecCCCCeEEEEec--CCeEEEEeCCCceeeeeecCCC-CcEEEEEEeCCCCCCEEEEEecCCe
Q 016457 31 SIQTNFGD--DYVFEIVPKNDWSLMAVSLS--TNVVKLYSPVTGQYSGECKGHS-STVNQISFSGPSTPHVLHSCSSDGT 105 (389)
Q Consensus 31 ~~~~~~~~--~~v~~~~~~~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~~l~s~~~dg~ 105 (389)
.+.++... .....++|++++.+.++.+. ++.|.++|+.+++.+..+.-.. .....+++.. + .+.++.-.++.
T Consensus 11 vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~--~lyv~t~~~~~ 87 (266)
T 2iwa_A 11 VLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-E--KLYQVVWLKNI 87 (266)
T ss_dssp EEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-T--EEEEEETTCSE
T ss_pred EEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-C--EEEEEEecCCE
Confidence 34445442 34679999998744444443 5799999999999888765222 1223455652 2 35555567889
Q ss_pred EEEEEccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecc-c---CCeeEEEEecCCC
Q 016457 106 IRAWDTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESH-V---EDVTQVHFVPNNQ 180 (389)
Q Consensus 106 i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~ 180 (389)
+.++|..+.+.+.++... ... ..++++++.++++..++.|.++|..+.+.+..+.-+. . ..++.+.|. ++.
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCCCcEEEEEECCCCCe---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 999999999999998754 222 3344578888887778999999999998888776221 1 136678888 563
Q ss_pred CeEEEEeCCCcEEEEecCCCCCCCccceeeecc-------------CCceeeEEEecCCCcEEEEEecCCcEEEEEcCCC
Q 016457 181 NKVVSASVDGLICTFDTGGDINDDDLLESVINV-------------GTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
+++....++.|.+.|..++. .+..+... ......++|+|....+++++...+.+...++...
T Consensus 164 -lyvn~~~~~~V~vID~~tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 164 -VWANIWQTDCIARISAKDGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp -EEEEETTSSEEEEEETTTCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred -EEEecCCCCeEEEEECCCCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 66666568899999999763 22222211 1356899999555566777777888888887643
No 243
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.24 E-value=1.6e-08 Score=93.03 Aligned_cols=154 Identities=12% Similarity=0.091 Sum_probs=101.8
Q ss_pred EeecCCCCe----EEEEecCCeEEEEeCCCceeeeeecCCC----CcEE-EEEEeCCCCCCEEEEEe------cCCeEEE
Q 016457 44 IVPKNDWSL----MAVSLSTNVVKLYSPVTGQYSGECKGHS----STVN-QISFSGPSTPHVLHSCS------SDGTIRA 108 (389)
Q Consensus 44 ~~~~~~~~~----l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~~v~-~i~~~~~~~~~~l~s~~------~dg~i~i 108 (389)
++++|.+.. |++++.|+.|.-+|..+|+.+....... ..+. ..... ++ .++.++ .++.|+.
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g---~V~vg~~g~e~g~~g~v~A 186 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD---KVIIGSSGAELGVRGYLTA 186 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT---EEEECCBCGGGTCCCEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC---EEEEEecccccCCCCeEEE
Confidence 345444444 8888889999999999999887754321 0111 11122 44 555554 3899999
Q ss_pred EEccCCeEEEEEEcCCCCe--------------------------------------EEEEEeCCCCeEEEeecC-----
Q 016457 109 WDTRSFHEVWSVTAGSQEI--------------------------------------FCFSFGGSTDYLLAAGCG----- 145 (389)
Q Consensus 109 wd~~~~~~~~~~~~~~~~v--------------------------------------~~~~~~~~~~~l~~~~~d----- 145 (389)
+|..+++.+..+....... ..+++.+..+.++.+..+
T Consensus 187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~ 266 (599)
T 1w6s_A 187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN 266 (599)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence 9999999999887542110 134566677788877665
Q ss_pred -----------CeEEEEECcCCceeeeeeecccC--------CeeEEEEe-cCCC--CeEEEEeCCCcEEEEecCCCC
Q 016457 146 -----------SQIQFWDWRNKKQVACLEESHVE--------DVTQVHFV-PNNQ--NKVVSASVDGLICTFDTGGDI 201 (389)
Q Consensus 146 -----------~~i~iwd~~~~~~~~~~~~~~~~--------~v~~~~~~-~~~~--~~l~~~~~d~~i~i~d~~~~~ 201 (389)
+.|..+|.++++.+..++..+.. ...-+... .+|+ ..++.++.+|.++++|.++++
T Consensus 267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCC
Confidence 38999999999998877632221 11112222 4552 267778899999999998774
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.23 E-value=3.1e-08 Score=85.95 Aligned_cols=245 Identities=11% Similarity=0.043 Sum_probs=143.4
Q ss_pred CCCCCCEEEEEecCCeEEEEEccCC----eEEEEEE-------cCCCCeEEEEEeCCCCeEEEeecC------CeEEEEE
Q 016457 90 GPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVT-------AGSQEIFCFSFGGSTDYLLAAGCG------SQIQFWD 152 (389)
Q Consensus 90 ~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd 152 (389)
++.+ .+++++..+++|.++|+.+. +...+++ .....-..+.+.|++ .++++..+ +.|.++|
T Consensus 93 ~~r~-~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERR-FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSC-EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCC-EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 5553 45666778899999998755 6666663 112245567788888 55554444 7899999
Q ss_pred CcCCceeeeeeec-cc-CCeeEEEEecCCCCeEEEEe-------------------CCCcEEEEecCCCCCCCccceeee
Q 016457 153 WRNKKQVACLEES-HV-EDVTQVHFVPNNQNKVVSAS-------------------VDGLICTFDTGGDINDDDLLESVI 211 (389)
Q Consensus 153 ~~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~ 211 (389)
.++++.+.++..+ .. ..-..+.|+|+++ .+++.. .+.+|.+||+.++ +.+..+.
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~----k~~~tI~ 245 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR----KRIHSLT 245 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT----EEEEEEE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCC----cEeeEEe
Confidence 9999999888622 11 2234588899995 777774 3689999999853 2333332
Q ss_pred cc--CCceeeEEE--ecCCCcEEEEEe------cCCcEEEEEcCCCce--eEEeecccccccCCcc-----CCC-CCcee
Q 016457 212 NV--GTSVGKVGF--FGETNKHLWCLT------HIETLSIWDWKDGQN--VASFENARSLASDSWT-----LDD-VDYFV 273 (389)
Q Consensus 212 ~~--~~~i~~~~~--~~~~~~~l~~~~------~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~-----~~~-~~~i~ 273 (389)
.. ......+.| + ++++++++++ .+++|.+|....++. .+.+............ ... .....
T Consensus 246 vg~~g~~P~~i~f~~~-Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 246 LGEENRMALELRPLHD-PTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp SCTTEEEEEEEEECSS-TTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred cCCCCCccceeEeeEC-CCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 21 123455656 6 6777777666 456888877655431 1111100000000000 000 14567
Q ss_pred eecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccce-ee-----eeccCCCcccCCCCCCCceeEEEe
Q 016457 274 DCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTA-VV-----RSVLPMPSVQGRPAQSHGIFGWTG 347 (389)
Q Consensus 274 ~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~-~v-----~~~~~~~~~~~~~~s~~~~~l~s~ 347 (389)
.+.+++||+.+|+ +.-..+.|.+||+..... .+.+..+..+-.- .+ ..+...+..+ +++|||++|+++
T Consensus 325 ~I~lS~DGrfLYV-Snrg~d~VavfdV~d~~~---~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~--~lSpDGk~LyVa 398 (462)
T 2ece_A 325 DIDISLDDKFLYL-SLWGIGEVRQYDISNPFK---PVLTGKVKLGGIFHRADHPAGHKLTGAPQML--EISRDGRRVYVT 398 (462)
T ss_dssp CEEECTTSCEEEE-EETTTTEEEEEECSSTTS---CEEEEEEECBTTTTCBCCTTSCCCCSCCCCE--EECTTSSEEEEE
T ss_pred EEEECCCCCEEEE-EeCCCCEEEEEEecCCCC---cEEEEEEEeCCeeccccccccccCCCCCCEE--EEcCCCCEEEEE
Confidence 8999999996543 444568999999964321 1123344322100 00 0000112333 899999999988
Q ss_pred c
Q 016457 348 G 348 (389)
Q Consensus 348 ~ 348 (389)
.
T Consensus 399 N 399 (462)
T 2ece_A 399 N 399 (462)
T ss_dssp C
T ss_pred c
Confidence 7
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.22 E-value=6.8e-09 Score=97.41 Aligned_cols=236 Identities=13% Similarity=0.101 Sum_probs=150.0
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCC----CcEEE-EEEeCCCCCCEEEEEec------CCeEEEEEccCCeEEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHS----STVNQ-ISFSGPSTPHVLHSCSS------DGTIRAWDTRSFHEVW 118 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~~v~~-i~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~ 118 (389)
+..+++++.|+.|..+|..+|+.+..+.... ..+.+ .... ++ .++.+.. +|.|..+|..+++.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~---~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KG---KVIIGNGGAEYGVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TT---EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CC---EEEEeCCCCCcCCCCEEEEEECCCCcEEE
Confidence 4578888889999999999999888775421 11111 1111 33 5555543 5899999999999999
Q ss_pred EEEcCC-C------------------------------CeEEEEEeCCCCeEEEeecCC-------------------eE
Q 016457 119 SVTAGS-Q------------------------------EIFCFSFGGSTDYLLAAGCGS-------------------QI 148 (389)
Q Consensus 119 ~~~~~~-~------------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~i 148 (389)
.+.... . ....+++.|..+.++++..++ .|
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 887421 0 012468888888888887665 49
Q ss_pred EEEECcCCceeeeeeec-cc-------CCeeEEEEecCCC--CeEEEEeCCCcEEEEecCCCCCCCc----c---ceeee
Q 016457 149 QFWDWRNKKQVACLEES-HV-------EDVTQVHFVPNNQ--NKVVSASVDGLICTFDTGGDINDDD----L---LESVI 211 (389)
Q Consensus 149 ~iwd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~----~---~~~~~ 211 (389)
..+|.++++.+..++.. |. .+.....+..+++ ..++.++.+|.++++|..+++.... . ...+.
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 99999999998887622 21 2222233333442 2588899999999999987742100 0 00000
Q ss_pred -ccCC------------------------ceeeEEEecCCCcEEEEEe--------------------------------
Q 016457 212 -NVGT------------------------SVGKVGFFGETNKHLWCLT-------------------------------- 234 (389)
Q Consensus 212 -~~~~------------------------~i~~~~~~~~~~~~l~~~~-------------------------------- 234 (389)
.... .-..++++|..+ ++++..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 431 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDV 431 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCC-EEEEeccccceEeeeeccccccccccccCccccccCCC
Confidence 0000 011267774333 333311
Q ss_pred ----cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 235 ----HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 235 ----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
.+|.|..||+.+++.+-.+... .......+...+. +++.|+.||.|+.||..+++.
T Consensus 432 p~~~~~g~l~A~D~~tG~~~W~~~~~-------------~~~~~~~~~t~gg--~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 432 PAAVVSGALLAWDPVKQKAAWKVPYP-------------THWNGGTLSTAGN--LVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CGGGCEEEEEEEETTTTEEEEEEEES-------------SSCCCCEEEETTT--EEEEECTTSEEEEEETTTCCE
T ss_pred CCCCccceEEEEeCCCCcEEEEccCC-------------CCCcCceeEeCCC--EEEEECCcccchhhhhhcChh
Confidence 2378999999999988776542 2223333444566 778889999999999999876
No 246
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.19 E-value=1.8e-08 Score=92.58 Aligned_cols=236 Identities=12% Similarity=0.067 Sum_probs=146.2
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCC----CcEE-EEEEeCCCCCCEEEEEec------CCeEEEEEccCCeEEE
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHS----STVN-QISFSGPSTPHVLHSCSS------DGTIRAWDTRSFHEVW 118 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----~~v~-~i~~~~~~~~~~l~s~~~------dg~i~iwd~~~~~~~~ 118 (389)
+..+++++.++.|..+|..+|+.+..+.... ..+. ..... ++ .++.++. ++.|..+|..+++.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g---~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD---TVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT---EEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC---EEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 4578888889999999999999887764221 0121 11111 34 5565554 7999999999999999
Q ss_pred EEEcCCCC-------------------------------------e-EEEEEeCCCCeEEEeecC---------------
Q 016457 119 SVTAGSQE-------------------------------------I-FCFSFGGSTDYLLAAGCG--------------- 145 (389)
Q Consensus 119 ~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d--------------- 145 (389)
.+...... + ..+++.+..+.++.+..+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 88753211 0 135667667777776532
Q ss_pred -CeEEEEECcCCceeeeeeeccc--------CCeeEEEEecCCC--CeEEEEeCCCcEEEEecCCCCCCCcc-----c--
Q 016457 146 -SQIQFWDWRNKKQVACLEESHV--------EDVTQVHFVPNNQ--NKVVSASVDGLICTFDTGGDINDDDL-----L-- 207 (389)
Q Consensus 146 -~~i~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~-----~-- 207 (389)
+.|..+|.++++.+..++..+. ....-+...++|+ ..++.++.+|.++++|..+++..... .
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccc
Confidence 3699999999999887762211 0111122224552 25778889999999999876421100 0
Q ss_pred -eeee-ccCCce--------------------------eeEEEecCCCcEEEEEe-------------------------
Q 016457 208 -ESVI-NVGTSV--------------------------GKVGFFGETNKHLWCLT------------------------- 234 (389)
Q Consensus 208 -~~~~-~~~~~i--------------------------~~~~~~~~~~~~l~~~~------------------------- 234 (389)
..+. ....++ ..++++| +..++++..
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp-~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP-ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET-TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC-CCCEEEEEchhccccccccccccccCCccccccc
Confidence 0000 000111 2467774 334454443
Q ss_pred ------------cCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 235 ------------HIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 235 ------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
.++.|..||+.+++.+-++... ..+....+...+. .++.++.||.|+.||..+
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-------------~~~~~~~~~t~gg--~v~~g~~dg~l~a~D~~t 494 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-------------FAAWGGTLYTKGG--LVWYATLDGYLKALDNKD 494 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-------------SCCCSBCEEETTT--EEEEECTTSEEEEEETTT
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCC-------------CCccceeEEECCC--EEEEEcCCCeEEEEECCC
Confidence 3478999999999888776532 2222333333455 566688999999999999
Q ss_pred CCc
Q 016457 303 GGA 305 (389)
Q Consensus 303 ~~~ 305 (389)
++.
T Consensus 495 G~~ 497 (571)
T 2ad6_A 495 GKE 497 (571)
T ss_dssp CCE
T ss_pred CCE
Confidence 887
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.18 E-value=7.1e-08 Score=88.68 Aligned_cols=195 Identities=11% Similarity=0.047 Sum_probs=122.8
Q ss_pred CCeEEEEec-CCeEEEEeC-CCceeeeeecCCCC-c----------EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 50 WSLMAVSLS-TNVVKLYSP-VTGQYSGECKGHSS-T----------VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 50 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~~~-~----------v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
+..+++++. ++.|.-+|. .+|+.+..+..... . -..++.. + ..++.++.|+.|..+|..+++.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-A---GQIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-T---TEEEEECTTSEEEEEETTTCCE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-C---CEEEEEeCCCEEEEEECCCCCE
Confidence 446777777 889999999 89998877653221 0 0122332 3 4788888999999999999999
Q ss_pred EEEEEcCCC----CeE-EEEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeecccC-----------------
Q 016457 117 VWSVTAGSQ----EIF-CFSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEESHVE----------------- 168 (389)
Q Consensus 117 ~~~~~~~~~----~v~-~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~----------------- 168 (389)
+..+..... .+. .... .++.+++++. ++.|..+|.++++.+.++......
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G 215 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG 215 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred EEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence 988775321 222 1112 2456777665 789999999999998776511100
Q ss_pred --------------------CeeEEEEecCCCCeEEEEeCC----------------CcEEEEecCCCCCCCccceeee-
Q 016457 169 --------------------DVTQVHFVPNNQNKVVSASVD----------------GLICTFDTGGDINDDDLLESVI- 211 (389)
Q Consensus 169 --------------------~v~~~~~~~~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~~- 211 (389)
....+++.++.. .++.++.+ +.|..+|.++++ .+-...
T Consensus 216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~----~~W~~~~ 290 (571)
T 2ad6_A 216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGM----AKWGYQK 290 (571)
T ss_dssp CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCC----EEEEEES
T ss_pred ccccccccCcccceecCCCCeeeeEEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCc----EEEEecC
Confidence 002356777664 66666532 258899998764 122211
Q ss_pred -ccCC----ceeeEEEe--cCCC---cEEEEEecCCcEEEEEcCCCceeEEeec
Q 016457 212 -NVGT----SVGKVGFF--GETN---KHLWCLTHIETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 212 -~~~~----~i~~~~~~--~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 255 (389)
.+.. .+....+. ..++ ..++.++.+|.++++|..+++.+..+..
T Consensus 291 ~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp STTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecc
Confidence 1110 11121221 0245 3577888899999999999998877653
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=3.6e-08 Score=79.25 Aligned_cols=200 Identities=15% Similarity=0.156 Sum_probs=131.8
Q ss_pred eeeeeecCCCCc--EEEEEEeCCCCCCEEEEEecCC--eEEEEEccCCeEEEEEEcCCCCeE--EEEEeCCCCeEEEeec
Q 016457 71 QYSGECKGHSST--VNQISFSGPSTPHVLHSCSSDG--TIRAWDTRSFHEVWSVTAGSQEIF--CFSFGGSTDYLLAAGC 144 (389)
Q Consensus 71 ~~~~~~~~~~~~--v~~i~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~ 144 (389)
+.+.++. |... ...+.|+ ++ .++.+.+.+| .|+++|+.+++.+..+.... ... .++. .++.++....
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~--~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~--~g~~ly~ltw 104 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NG--YFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISD--WKDKIVGLTW 104 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TT--EEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEE--ETTEEEEEES
T ss_pred EEEEEec-CCCCcccceEEEE-CC--EEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEE--eCCEEEEEEe
Confidence 3455553 4433 4788898 55 5777877776 89999999999999988753 333 3555 4567766665
Q ss_pred -CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec--cC---Ccee
Q 016457 145 -GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN--VG---TSVG 218 (389)
Q Consensus 145 -d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~---~~i~ 218 (389)
++.+.+||..+.+.+.++.- .. ....+.+++. .|+.+..++.|.++|..+.. ....+.. .. ..++
T Consensus 105 ~~~~v~v~D~~t~~~~~ti~~--~~--eG~glt~dg~-~L~~SdGs~~i~~iDp~T~~----v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 105 KNGLGFVWNIRNLRQVRSFNY--DG--EGWGLTHNDQ-YLIMSDGTPVLRFLDPESLT----PVRTITVTAHGEELPELN 175 (262)
T ss_dssp SSSEEEEEETTTCCEEEEEEC--SS--CCCCEEECSS-CEEECCSSSEEEEECTTTCS----EEEEEECEETTEECCCEE
T ss_pred eCCEEEEEECccCcEEEEEEC--CC--CceEEecCCC-EEEEECCCCeEEEEcCCCCe----EEEEEEeccCCccccccc
Confidence 89999999999999999872 22 2233445665 55555557889999998642 2333222 12 2344
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEe
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGG 289 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g 289 (389)
.+.|. ++.+.+..-.++.|.+.|..+++.+..+.................-.+.++|+|+++++ +++|
T Consensus 176 ELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l-fVTG 243 (262)
T 3nol_A 176 ELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL-FVTG 243 (262)
T ss_dssp EEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE-EEEE
T ss_pred eeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEE-EEEC
Confidence 57775 56555555568899999999999998887532111100000122456889999998875 4555
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.16 E-value=1e-06 Score=84.81 Aligned_cols=278 Identities=12% Similarity=0.064 Sum_probs=175.4
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecC-------CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG-------HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
...|.++...+++. |.+|+.++-+.+||..+++....... ....|.++...+++ .|..|+.+| |.+||
T Consensus 214 ~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g---~lWigt~~G-l~~~~ 288 (795)
T 4a2l_A 214 TKQIQAILQQSPTR-IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQN---RLWIGTFND-LNIYH 288 (795)
T ss_dssp CCCEEEEEEEETTE-EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTS---CEEEEESSC-EEEEE
T ss_pred CCeeEEEEEcCCCC-EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCC---CEEEEeCCh-hheEc
Confidence 45688888888775 55566554589999877654332211 23569999988777 566666664 88999
Q ss_pred ccCCeEEEEEEc-------CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee------cccCCeeEEEEec
Q 016457 111 TRSFHEVWSVTA-------GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE------SHVEDVTQVHFVP 177 (389)
Q Consensus 111 ~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~ 177 (389)
..+++....... ....|.++...+ .+.+.+++.++-|..|+..+.... .+.. .....|.++...+
T Consensus 289 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 289 EGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp TTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECT
T ss_pred CCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECC
Confidence 877665432211 135799999884 556777887788999987655322 2210 1234689999888
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCCCccceeee---------ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCc
Q 016457 178 NNQNKVVSASVDGLICTFDTGGDINDDDLLESVI---------NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQ 248 (389)
Q Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 248 (389)
++ .|..|+.++-|..||..++. ...+. .....|.+++.. .++..|.+|+.++-|.+||..+++
T Consensus 367 ~g--~lWiGt~~~Gl~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 367 DK--NLWIGTNDGGLNLYNPITQR-----FTSYTLQEDESARGIGSNNIKAVYVD-EKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp TS--CEEEEESSSCEEEECTTTCC-----EEEECCC------CCSCSCEEEEEEE-TTTTEEEEEETTTEEEEEETTTCC
T ss_pred CC--CEEEEECCCCeEEEcCCCCc-----EEEEecCCCCcccCCCCccEEEEEEc-CCCCEEEEEeCcCceeEEeCCCCc
Confidence 87 46678888789999987542 11111 123568888877 566657888887889999988775
Q ss_pred eeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec------cccee
Q 016457 249 NVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG------GHTAV 322 (389)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~------~h~~~ 322 (389)
... +...... .....|.++...++|. +.+ |+.+| |.+|+..+++. ..+.. .+...
T Consensus 439 ~~~-~~~~~~~-------l~~~~v~~i~~d~~g~--lwi-gt~~G-l~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 439 VEN-FNQRNSQ-------LVNENVYAILPDGEGN--LWL-GTLSA-LVRFNPEQRSF-------TTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEE-ECTTTSC-------CSCSCEEEEEECSSSC--EEE-EESSC-EEEEETTTTEE-------EECCBCTTCCBCCCCC
T ss_pred EEE-eecCCCC-------cCCCeeEEEEECCCCC--EEE-EecCc-eeEEeCCCCeE-------EEccccccccccCCce
Confidence 433 3211000 0235788888888775 333 33444 88898877654 22210 12245
Q ss_pred eeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 323 VRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 323 v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
|.++ ..+++|.+.+... +-|..|+...
T Consensus 500 i~~i---------~~d~~g~lWigt~--~Gl~~~~~~~ 526 (795)
T 4a2l_A 500 ITTL---------FRDSHKRLWIGGE--EGLSVFKQEG 526 (795)
T ss_dssp EEEE---------EECTTCCEEEEES--SCEEEEEEET
T ss_pred EEEE---------EECCCCCEEEEeC--CceEEEeCCC
Confidence 6777 6677777655544 4477777654
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.13 E-value=6.2e-07 Score=86.36 Aligned_cols=281 Identities=10% Similarity=0.039 Sum_probs=173.7
Q ss_pred eEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeee-cCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE
Q 016457 41 VFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGEC-KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119 (389)
Q Consensus 41 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 119 (389)
|.++...+++. |.+|+.++.|..|+..+++..... ..+...|.++...+++ .|..|+.++-|..||..+++....
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g---~lwigt~~~Gl~~~~~~~~~~~~~ 250 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPT---RIWVATEGAGLFLINPKTKEIKNY 250 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETT---EEEEEEBSSCEEEEETTTTEEEEE
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCC---CEEEEECCCCeEEEeCCCCeEEEe
Confidence 88888888775 555666556889998776543321 1234678888887776 566666554588999887655432
Q ss_pred EEc-------CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee------cccCCeeEEEEecCCCCeEEEE
Q 016457 120 VTA-------GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE------SHVEDVTQVHFVPNNQNKVVSA 186 (389)
Q Consensus 120 ~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~ 186 (389)
... ....|.++...++ +.+.+++.+ -|.+||..+++....... .....|.++...++| .|..|
T Consensus 251 ~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWig 326 (795)
T 4a2l_A 251 LHSPSNPKSISSNYIRSLAMDSQ-NRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG--GMWLG 326 (795)
T ss_dssp CCCTTCTTSCSCSBEEEEEECTT-SCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS--CEEEE
T ss_pred ecCCCCccccCCCeEEEEEEcCC-CCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc--CEEEE
Confidence 221 1356999998854 456666655 688999876643322110 123569999999887 46778
Q ss_pred eCCCcEEEEecCCCCCCCccceeee-------ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccccc
Q 016457 187 SVDGLICTFDTGGDINDDDLLESVI-------NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSL 259 (389)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 259 (389)
+.++-|..|+..+.. ...+. -....|.++... .++ .|.+|+.++-|..|+..+++...........
T Consensus 327 t~~~Gl~~~~~~~~~-----~~~~~~~~~~~~l~~~~V~~i~~d-~~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~ 399 (795)
T 4a2l_A 327 TYFGGLNYYHPIRNR-----FKNIRNIPYKNSLSDNVVSCIVED-KDK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDES 399 (795)
T ss_dssp ESSSCEEEECGGGGS-----SEEECCCTTSSSCSCSSEEEEEEC-TTS-CEEEEESSSCEEEECTTTCCEEEECCC----
T ss_pred ECCCCeEEeCCCccc-----ceEEcCCCCCCCCCCCeeEEEEEC-CCC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCc
Confidence 877889999876431 11111 123457888776 444 4777888888999998766543322111000
Q ss_pred c-cCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec----ccceeeeeccCCCcccC
Q 016457 260 A-SDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG----GHTAVVRSVLPMPSVQG 334 (389)
Q Consensus 260 ~-~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~ 334 (389)
. .. ....|.++...+++. .|..|+.++-|..|+..+++. ..+.. .+...|.++
T Consensus 400 ~~~l-----~~~~v~~i~~d~~g~--~lWigt~~~Gl~~~d~~~~~~-------~~~~~~~~~l~~~~v~~i-------- 457 (795)
T 4a2l_A 400 ARGI-----GSNNIKAVYVDEKKS--LVYIGTHAGGLSILHRNSGQV-------ENFNQRNSQLVNENVYAI-------- 457 (795)
T ss_dssp --CC-----SCSCEEEEEEETTTT--EEEEEETTTEEEEEETTTCCE-------EEECTTTSCCSCSCEEEE--------
T ss_pred ccCC-----CCccEEEEEEcCCCC--EEEEEeCcCceeEEeCCCCcE-------EEeecCCCCcCCCeeEEE--------
Confidence 0 00 235688888888775 356677767799999887764 22221 123456677
Q ss_pred CCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 335 RPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 335 ~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..+++|.+.+... + -|.+|+....
T Consensus 458 -~~d~~g~lwigt~-~-Gl~~~~~~~~ 481 (795)
T 4a2l_A 458 -LPDGEGNLWLGTL-S-ALVRFNPEQR 481 (795)
T ss_dssp -EECSSSCEEEEES-S-CEEEEETTTT
T ss_pred -EECCCCCEEEEec-C-ceeEEeCCCC
Confidence 6666776555443 4 4777776543
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.12 E-value=4.6e-08 Score=78.65 Aligned_cols=189 Identities=10% Similarity=0.114 Sum_probs=126.7
Q ss_pred eeeeec--CcceEEEeecCCCCeEEEEecCC--eEEEEeCCCceeeeeecCCCCcEEE--EEEeCCCCCCEEEEEecCCe
Q 016457 32 IQTNFG--DDYVFEIVPKNDWSLMAVSLSTN--VVKLYSPVTGQYSGECKGHSSTVNQ--ISFSGPSTPHVLHSCSSDGT 105 (389)
Q Consensus 32 ~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~~~v~~--i~~~~~~~~~~l~s~~~dg~ 105 (389)
+.++.+ ..-...+.|+ ++.+..+.+.+| .|+++|+++++.+..+.-.. .... ++.. +. .+.+..-.++.
T Consensus 34 v~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~--g~-~ly~ltw~~~~ 108 (262)
T 3nol_A 34 VHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW--KD-KIVGLTWKNGL 108 (262)
T ss_dssp EEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE--TT-EEEEEESSSSE
T ss_pred EEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe--CC-EEEEEEeeCCE
Confidence 444544 4445788898 666666666666 89999999999988876432 3333 4443 42 34445556889
Q ss_pred EEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeec-cc---CCeeEEEEecCCCC
Q 016457 106 IRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES-HV---EDVTQVHFVPNNQN 181 (389)
Q Consensus 106 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~~ 181 (389)
+.++|..+.+.+.++.... .=..++ ++++.|+.+..++.|.++|..+.+.+.++.-. .. ..++.+.|. +|.
T Consensus 109 v~v~D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~- 183 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE- 183 (262)
T ss_dssp EEEEETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-
T ss_pred EEEEECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-
Confidence 9999999999999998743 223444 36788888777889999999999988877621 12 234567776 563
Q ss_pred eEEEEeCCCcEEEEecCCCCCCCccceeee------------ccCCceeeEEEecCCCcEEEEEec
Q 016457 182 KVVSASVDGLICTFDTGGDINDDDLLESVI------------NVGTSVGKVGFFGETNKHLWCLTH 235 (389)
Q Consensus 182 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~~~~~i~~~~~~~~~~~~l~~~~~ 235 (389)
+++..-.++.|.+.|..++. .+..+. ......+.|+++| +.+.|++.+.
T Consensus 184 lyan~w~~~~I~vIDp~tG~----V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp-~~~~lfVTGK 244 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGK----VTGIIDLNGILAEAGPLPSPIDVLNGIAWDK-EHHRLFVTGK 244 (262)
T ss_dssp EEEEETTSSEEEEECTTTCB----EEEEEECTTGGGGSCSCCSSCCCEEEEEEET-TTTEEEEEET
T ss_pred EEEEEccCCeEEEEECCCCc----EEEEEECCcCccccccccCcCCceEEEEEcC-CCCEEEEECC
Confidence 66666578899999999764 111111 1124568999995 4445555444
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.11 E-value=3.5e-07 Score=84.12 Aligned_cols=200 Identities=13% Similarity=0.058 Sum_probs=125.5
Q ss_pred CCeEEEEec-CCeEEEEeC-CCceeeeeecCCCCc-----------EEEEEEeCCCC--CCEEEEEecCCeEEEEEccCC
Q 016457 50 WSLMAVSLS-TNVVKLYSP-VTGQYSGECKGHSST-----------VNQISFSGPST--PHVLHSCSSDGTIRAWDTRSF 114 (389)
Q Consensus 50 ~~~l~~~~~-d~~i~iw~~-~~~~~~~~~~~~~~~-----------v~~i~~~~~~~--~~~l~s~~~dg~i~iwd~~~~ 114 (389)
+..+++++. ++.|.-+|. .+|+.+..+...... ...+++.|.+. +..|+.++.|+.|..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 446777777 789999999 899988777532210 12345543331 123888889999999999999
Q ss_pred eEEEEEEcCCC----CeEE-EEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeecccC---------------
Q 016457 115 HEVWSVTAGSQ----EIFC-FSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEESHVE--------------- 168 (389)
Q Consensus 115 ~~~~~~~~~~~----~v~~-~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~--------------- 168 (389)
+.+........ .+.+ -.+ .++.+++++. ++.|+.+|.++++.+.++......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 99988775421 2221 122 2456666653 799999999999998776621110
Q ss_pred ----------------------CeeEEEEecCCCCeEEEEeCCC----------------cEEEEecCCCCCCCccceee
Q 016457 169 ----------------------DVTQVHFVPNNQNKVVSASVDG----------------LICTFDTGGDINDDDLLESV 210 (389)
Q Consensus 169 ----------------------~v~~~~~~~~~~~~l~~~~~d~----------------~i~i~d~~~~~~~~~~~~~~ 210 (389)
.-..+++.+... +++.++.++ .|.-+|.++++.. -..+.
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~--W~~q~ 296 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK--FGYQK 296 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE--EEEES
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee--eEeec
Confidence 001356667764 777776653 7889999876411 11111
Q ss_pred eccCC----ceee-EEEec--CCC---cEEEEEecCCcEEEEEcCCCceeEEee
Q 016457 211 INVGT----SVGK-VGFFG--ETN---KHLWCLTHIETLSIWDWKDGQNVASFE 254 (389)
Q Consensus 211 ~~~~~----~i~~-~~~~~--~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~ 254 (389)
..|.. .... +.+.. .++ ..++.++.+|.++++|..+++.+....
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 11111 0111 11210 245 567788899999999999999887665
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.11 E-value=2e-07 Score=79.45 Aligned_cols=242 Identities=10% Similarity=0.030 Sum_probs=146.0
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecC--------------------CCCcEEEEEEeC-CCCCCEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG--------------------HSSTVNQISFSG-PSTPHVL 97 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--------------------~~~~v~~i~~~~-~~~~~~l 97 (389)
....++++++++++++++..++.|..|+..+++.. .+.. ....+..+++.+ ++ .|
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g---~l 94 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN---QL 94 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT---EE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCC---cE
Confidence 34567889999988888888999999998765432 2210 113578899997 55 56
Q ss_pred EEEecCCeEEEEEccCCeEEEEEEcC-----CCCeEEEEEeC-CCCeEEEeec-----------------CCeEEEEECc
Q 016457 98 HSCSSDGTIRAWDTRSFHEVWSVTAG-----SQEIFCFSFGG-STDYLLAAGC-----------------GSQIQFWDWR 154 (389)
Q Consensus 98 ~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~iwd~~ 154 (389)
+.+...+.|..+|..++.. ..+... ......+++.+ ++...++... ++.|..+|..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 6665556688888765532 222211 23578899998 6654444321 3678889987
Q ss_pred CCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEe
Q 016457 155 NKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLT 234 (389)
Q Consensus 155 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 234 (389)
+++...... .......|+++|++..++++-+..+.|..|++.+... .....+..... ...+++. +++.+.++..
T Consensus 174 ~~~~~~~~~--~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~--~~~~~~~~~~g-P~gi~~d-~~G~l~va~~ 247 (322)
T 2fp8_A 174 TKETTLLLK--ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK--GTAEVLVKIPN-PGNIKRN-ADGHFWVSSS 247 (322)
T ss_dssp TTEEEEEEE--EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT--TCEEEEEECSS-EEEEEEC-TTSCEEEEEE
T ss_pred CCEEEEecc--CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC--CccceEEeCCC-CCCeEEC-CCCCEEEEec
Confidence 665433222 2234567999999852344445678999999884321 11111111223 6788888 6676555554
Q ss_pred c----------CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 235 H----------IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 235 ~----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
. .+.|..+|. .++.+..+...... ....+..+++ .++ . +.++...++.|.++++...
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~--------~~~~~~~~~~-~~g-~-L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPF--------AGEHFEQIQE-HDG-L-LYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTT--------TTSCCCEEEE-ETT-E-EEEECSSCSEEEEEEC---
T ss_pred CcccccccCCCccEEEEECC-CCCEEEEEECCCCC--------ccccceEEEE-eCC-E-EEEeecCCCceEEEecccc
Confidence 4 467888886 47777666542100 0133455555 333 3 4455556788999988644
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.10 E-value=5e-08 Score=78.40 Aligned_cols=188 Identities=8% Similarity=0.048 Sum_probs=128.9
Q ss_pred eeeeeec--CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEE--EEEeCCCCCCEEEEEecCCeE
Q 016457 31 SIQTNFG--DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQ--ISFSGPSTPHVLHSCSSDGTI 106 (389)
Q Consensus 31 ~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~--i~~~~~~~~~~l~s~~~dg~i 106 (389)
.+.++.. ..-...+.|+. +.+..+.+.+|.|+++|+++++.+..+ - ...... +++. +. .+.+..-.++.+
T Consensus 45 Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~-~Ly~ltw~~~~v 118 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GE-RLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SS-CEEEEESSSCEE
T ss_pred EEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CC-EEEEEEccCCEE
Confidence 3445544 44456888874 566677777889999999999988877 2 233333 5554 32 456666678999
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeee-ccc---CCeeEEEEecCCCCe
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEE-SHV---EDVTQVHFVPNNQNK 182 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~---~~v~~~~~~~~~~~~ 182 (389)
.+||..+.+.+.++.... .-..+++ +++.|+.+..++.|.++|..+.+.+.++.- .+. ..++.+.|. +|. +
T Consensus 119 ~V~D~~Tl~~~~ti~~~~-eGwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-l 193 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSG-EGWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-I 193 (268)
T ss_dssp EEEETTTTEEEEEEECSS-CCCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-E
T ss_pred EEEECCcCcEEEEEeCCC-ceeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-E
Confidence 999999999999998643 3345554 578888887789999999999998887762 122 234667777 563 6
Q ss_pred EEEEeCCCcEEEEecCCCCCCCccceeee-------------ccCCceeeEEEecCCCcEEEEE
Q 016457 183 VVSASVDGLICTFDTGGDINDDDLLESVI-------------NVGTSVGKVGFFGETNKHLWCL 233 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~l~~~ 233 (389)
++....+..|.+.|..+++ .+..+. ......+.|++.|....++++|
T Consensus 194 yanvw~s~~I~vIDp~TG~----V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGT----VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCB----EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCc----EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 6666578899999999764 111111 1224668999995555555554
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.09 E-value=1.9e-07 Score=85.98 Aligned_cols=151 Identities=15% Similarity=0.078 Sum_probs=97.4
Q ss_pred CCeEEEEecCCeEEEEeCCCceeeeeecCCCC----cEE-EEEEeCC---CCCCEEEEEe------cCCeEEEEEccCCe
Q 016457 50 WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSS----TVN-QISFSGP---STPHVLHSCS------SDGTIRAWDTRSFH 115 (389)
Q Consensus 50 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----~v~-~i~~~~~---~~~~~l~s~~------~dg~i~iwd~~~~~ 115 (389)
+..+++++.++.|.-+|..+|+.+........ .+. ......+ +. ..+++++ .++.|..+|..+++
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~-~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGK-VLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCC-EEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCc-EEEEEeccccccCCCCEEEEEECCCCC
Confidence 45788888899999999999998877653221 111 1111112 21 1566654 37899999999999
Q ss_pred EEEEEEcCCCCe-----------------------------------------EEEEEeCCCCeEEEeec----------
Q 016457 116 EVWSVTAGSQEI-----------------------------------------FCFSFGGSTDYLLAAGC---------- 144 (389)
Q Consensus 116 ~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~---------- 144 (389)
.+.........+ ..++++|..+.++++..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 988765421111 12456667777777653
Q ss_pred ----------C----CeEEEEECcCCceeeeeeecccC-----CeeE-EEEe---cCCC--CeEEEEeCCCcEEEEecCC
Q 016457 145 ----------G----SQIQFWDWRNKKQVACLEESHVE-----DVTQ-VHFV---PNNQ--NKVVSASVDGLICTFDTGG 199 (389)
Q Consensus 145 ----------d----~~i~iwd~~~~~~~~~~~~~~~~-----~v~~-~~~~---~~~~--~~l~~~~~d~~i~i~d~~~ 199 (389)
| +.|..+|.++++.+..++..+.. .+.. +.+. .+|+ ..++.++.+|.++++|..+
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999999887622211 1111 2222 3552 2688899999999999987
Q ss_pred CC
Q 016457 200 DI 201 (389)
Q Consensus 200 ~~ 201 (389)
++
T Consensus 356 G~ 357 (582)
T 1flg_A 356 GK 357 (582)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.03 E-value=6.2e-07 Score=71.51 Aligned_cols=189 Identities=10% Similarity=0.048 Sum_probs=125.5
Q ss_pred eeeeec--CcceEEEeecCCCCeEEEEecC--CeEEEEeCCCceeeeeecCCCCc-EEEEEEeCCCCCCEEEEEecCCeE
Q 016457 32 IQTNFG--DDYVFEIVPKNDWSLMAVSLST--NVVKLYSPVTGQYSGECKGHSST-VNQISFSGPSTPHVLHSCSSDGTI 106 (389)
Q Consensus 32 ~~~~~~--~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~~~l~s~~~dg~i 106 (389)
+.++.+ ..-.-.+.|++ +.+..+.+.. ..|+.+|+.+++.+..+.-.... --.+++.. + .+....-.++.+
T Consensus 12 ~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~--~ly~ltw~~~~v 87 (243)
T 3mbr_X 12 VKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-D--RLIQLTWRNHEG 87 (243)
T ss_dssp EEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-T--EEEEEESSSSEE
T ss_pred EEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-C--EEEEEEeeCCEE
Confidence 344444 45566889987 5555555554 48999999999998877543221 12344442 2 455556678899
Q ss_pred EEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeec-cc---CCeeEEEEecCCCCe
Q 016457 107 RAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEES-HV---EDVTQVHFVPNNQNK 182 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~~~ 182 (389)
.+||..+.+.+.++..... =..++. +++.|+++..++.|.++|..+.+.+.++.-. +. ..++.+.+. +|. +
T Consensus 88 ~v~D~~tl~~~~ti~~~~~-Gwglt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-l 162 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGE-GWALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-L 162 (243)
T ss_dssp EEEETTTTEEEEEEECSSC-CCEEEE--CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-E
T ss_pred EEEECCcCcEEEEEeCCCC-ceEEee--CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-E
Confidence 9999999999999987533 345554 6778888777899999999999888877621 21 245566766 453 5
Q ss_pred EEEEeCCCcEEEEecCCCCCCCccceeee-------------ccCCceeeEEEecCCCcEEEEE
Q 016457 183 VVSASVDGLICTFDTGGDINDDDLLESVI-------------NVGTSVGKVGFFGETNKHLWCL 233 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~~l~~~ 233 (389)
++..-.+..|.+.|..++.. +..+. ......+.|++.|..+.++++|
T Consensus 163 yanvw~s~~I~vIDp~tG~V----~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKV----VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBE----EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCE----EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 55555678999999997641 11111 1234668999995444444444
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.01 E-value=1.6e-06 Score=79.81 Aligned_cols=195 Identities=10% Similarity=-0.007 Sum_probs=120.6
Q ss_pred CeEEEEecCCeEEEEeCCCceeeeeecCCCCc---------EEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEE
Q 016457 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGHSST---------VNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVT 121 (389)
Q Consensus 51 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~---------v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 121 (389)
..+++++.++.|.-+|..+|+.+..+...... -..+++. + ..++.++.|+.|..+|..+|+.+..+.
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~-~---~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-G---DKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-T---TEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE-C---CEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 45666666455999999999998877543221 0122332 3 378888899999999999999998887
Q ss_pred cCCC----CeE-EEEEeCC---CC-eEEEeec------CCeEEEEECcCCceeeeeeecccC------------------
Q 016457 122 AGSQ----EIF-CFSFGGS---TD-YLLAAGC------GSQIQFWDWRNKKQVACLEESHVE------------------ 168 (389)
Q Consensus 122 ~~~~----~v~-~~~~~~~---~~-~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~------------------ 168 (389)
.... .+. .-..... +. .+++++. ++.|..+|.++++.+.+... ...
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~-~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF-VEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES-STTCEEEETTEEEEESSCTTC
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC-CccccccccCccccccccccc
Confidence 5421 111 1111101 22 5666543 78999999999998876541 100
Q ss_pred -----------------------CeeEEEEecCCCCeEEEEeC--------------------C----CcEEEEecCCCC
Q 016457 169 -----------------------DVTQVHFVPNNQNKVVSASV--------------------D----GLICTFDTGGDI 201 (389)
Q Consensus 169 -----------------------~v~~~~~~~~~~~~l~~~~~--------------------d----~~i~i~d~~~~~ 201 (389)
.-..+++.|+.. +++.+.. | +.|.-+|..+++
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g-~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~ 302 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETN-TIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGE 302 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTT-EEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCC
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCC-EEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCC
Confidence 002356777764 6666653 2 579999998774
Q ss_pred CCCccceeee--ccCC----ceee-EEEec--CCC---cEEEEEecCCcEEEEEcCCCceeEEeec
Q 016457 202 NDDDLLESVI--NVGT----SVGK-VGFFG--ETN---KHLWCLTHIETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 202 ~~~~~~~~~~--~~~~----~i~~-~~~~~--~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 255 (389)
. +-.+. .|.. .+.. +.+.. .++ ..++.++.+|.++++|..+++.+..+..
T Consensus 303 ~----~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 303 V----KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp E----EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred E----EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 1 22211 1210 1111 22221 245 4788899999999999999998877654
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.01 E-value=8.1e-07 Score=70.85 Aligned_cols=201 Identities=12% Similarity=0.089 Sum_probs=131.4
Q ss_pred eeeeeecCCCC--cEEEEEEeCCCCCCEEEEEecCC--eEEEEEccCCeEEEEEEcCCCCe-EEEEEeCCCCeEEEeec-
Q 016457 71 QYSGECKGHSS--TVNQISFSGPSTPHVLHSCSSDG--TIRAWDTRSFHEVWSVTAGSQEI-FCFSFGGSTDYLLAAGC- 144 (389)
Q Consensus 71 ~~~~~~~~~~~--~v~~i~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~- 144 (389)
+.+.++. |.. -...+.|++ + .++.+.+.+| .|+.+|+.+++.+..+....... ..+++. ++.++....
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~--~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-G--HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T--EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred EEEEEcC-CCCccccccEEEEC-C--EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee
Confidence 4455553 543 466899986 4 5777777654 89999999999999888653322 344554 566666654
Q ss_pred CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec--cC---Cceee
Q 016457 145 GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN--VG---TSVGK 219 (389)
Q Consensus 145 d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~---~~i~~ 219 (389)
++.+.+||..+.+.+.++.. ...-..++ +++. .|+.+..++.|.++|..+.. .+..+.. +. ..++.
T Consensus 84 ~~~v~v~D~~tl~~~~ti~~--~~~Gwglt--~dg~-~L~vSdgs~~l~~iDp~t~~----~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 84 NHEGFVYDLATLTPRARFRY--PGEGWALT--SDDS-HLYMSDGTAVIRKLDPDTLQ----QVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp SSEEEEEETTTTEEEEEEEC--SSCCCEEE--ECSS-CEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEE
T ss_pred CCEEEEEECCcCcEEEEEeC--CCCceEEe--eCCC-EEEEECCCCeEEEEeCCCCe----EEEEEEEccCCccccccee
Confidence 89999999999999999972 22223444 5565 55555668899999998642 2333322 22 23455
Q ss_pred EEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCc-cCCCCCceeeecccCCCCeEEEEEe
Q 016457 220 VGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSW-TLDDVDYFVDCHYPGEGENLWVIGG 289 (389)
Q Consensus 220 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~g 289 (389)
+.+. ++..++..-.+..|.+.|..+++.+..+....-.....- .....+-.+.++++|+++++ +++|
T Consensus 155 Le~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~l-fVTG 222 (243)
T 3mbr_X 155 LEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRL-FVTG 222 (243)
T ss_dssp EEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEE-EEEE
T ss_pred eEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEE-EEEC
Confidence 6664 565555555678999999999999988874322111100 00122467889999988864 5666
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.98 E-value=4.3e-06 Score=70.60 Aligned_cols=231 Identities=9% Similarity=-0.001 Sum_probs=138.4
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC-C-eEEEEEccCCe
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD-G-TIRAWDTRSFH 115 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-g-~i~iwd~~~~~ 115 (389)
......++|+++++++++-..++.|..||... +....+. .......+++.+++ +++++.... + .|..++..+++
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~dG--~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTSNG--DLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECTTS--CEEEEEECTTSCEEEEEECTTSC
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcCCC--cEEEEeccCCcceEEEEcCCCCe
Confidence 35577899999998666666789999999764 3333333 23568899999998 555554332 2 46667777776
Q ss_pred EEEEEEcC-CCCeEEEEEeCCCCeEEEee-cCCeEEEEECcCCce-eeeee--------ecccCCeeEEEEecCCCCeEE
Q 016457 116 EVWSVTAG-SQEIFCFSFGGSTDYLLAAG-CGSQIQFWDWRNKKQ-VACLE--------ESHVEDVTQVHFVPNNQNKVV 184 (389)
Q Consensus 116 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~-~~~~~--------~~~~~~v~~~~~~~~~~~~l~ 184 (389)
........ ......++.. .+..++++. .++.|..+|...++. +.... ...-.....| +|++..+++
T Consensus 107 ~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 54333322 2234455554 345555555 478999999865421 11100 0111234455 787754556
Q ss_pred EEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCc
Q 016457 185 SASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSW 264 (389)
Q Consensus 185 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 264 (389)
+-...+.|..||+.... .......+ ........+++. +++.++++....+.|.+++.. ++.........
T Consensus 184 ~d~~~~~I~~~~~~~~g-~~~~~~~~-~~~~~P~gi~vd-~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~------- 252 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTD-KPGEPEIF-VEQTNIDDFAFD-VEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ------- 252 (306)
T ss_dssp EETTTTEEEEEEBCTTS-CBCCCEEE-EESCCCSSEEEB-TTCCEEEECBTTCCEEEECTT-CCEEEEECGGG-------
T ss_pred EeCCCCEEEEEEeCCCC-CCCccEEE-eccCCCCCeEEC-CCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc-------
Confidence 66677899999997411 11111111 112356778888 677776666667899999975 55432211110
Q ss_pred cCCCCCceeeeccc---CCCCeEEEEEe
Q 016457 265 TLDDVDYFVDCHYP---GEGENLWVIGG 289 (389)
Q Consensus 265 ~~~~~~~i~~~~~~---~~~~~~~l~~g 289 (389)
......+++|. ++++.+|+.+.
T Consensus 253 ---~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 253 ---GVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ---TCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ---ccCCceEEEEecccCCCCEEEEECC
Confidence 12457889998 78886665544
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.96 E-value=8.8e-06 Score=69.97 Aligned_cols=242 Identities=9% Similarity=-0.050 Sum_probs=149.3
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
+...|.+..++. +|+.+. ...|+..++...+....+.. ...+..++|.+... .++++-...+.|..+++.......
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~-~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRE-LVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEecccc-EEEEEeccCCceEEEecCCCCceE
Confidence 345566666644 555444 45688888876554444443 34578999997652 445555567889999987655444
Q ss_pred EEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC-CcEEEEe
Q 016457 119 SVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD-GLICTFD 196 (389)
Q Consensus 119 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d 196 (389)
.+.........+++.+.++.|+.+.. .+.|.+.++........+. ........|+++|.+..++++-... +.|..++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 34333345678999877777776655 6899999987543322232 3345678999999765455555555 7899998
Q ss_pred cCCCCCCCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeee
Q 016457 197 TGGDINDDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDC 275 (389)
Q Consensus 197 ~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 275 (389)
+.... ...+. ..-.....+++++.++.+.++-+..+.|..+++........+.. .......+
T Consensus 189 ~dG~~-----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~------------~~~~P~gi 251 (349)
T 3v64_C 189 MDGSG-----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ------------GLPHPFAI 251 (349)
T ss_dssp TTSCS-----CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS------------SCSSEEEE
T ss_pred CCCCC-----cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC------------CCCCceEE
Confidence 87431 11111 12335688999965666666666678999999864332222221 11344566
Q ss_pred cccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 276 HYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 276 ~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
++. +.. +.++-...+.|..++..+++.
T Consensus 252 av~--~~~-ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 252 TVF--EDS-LYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EEE--TTE-EEEEETTTTEEEEEETTTCCS
T ss_pred EEE--CCE-EEEecCCCCeEEEEEccCCCc
Confidence 663 233 345555677888888555543
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.95 E-value=2.8e-07 Score=74.13 Aligned_cols=199 Identities=13% Similarity=0.099 Sum_probs=130.7
Q ss_pred eeeeeecCCCC--cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCe--EEEEEeCCCCeEEEeec-C
Q 016457 71 QYSGECKGHSS--TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEI--FCFSFGGSTDYLLAAGC-G 145 (389)
Q Consensus 71 ~~~~~~~~~~~--~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-d 145 (389)
+.+.++. |.. -...+.|.. + .++.+.+.+|.|+++|+.+++.+..+ .. ... ..+++ .++.++.... +
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~--~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~--~g~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-G--HFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLAS--DGERLYQLTWTE 115 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T--EEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEE--CSSCEEEEESSS
T ss_pred EEEEEEc-CCCccccceEEEEC-C--EEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEE--eCCEEEEEEccC
Confidence 4455553 443 347888873 4 58888889999999999999988887 43 333 34555 4556666554 8
Q ss_pred CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec--cCC---ceeeE
Q 016457 146 SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN--VGT---SVGKV 220 (389)
Q Consensus 146 ~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~---~i~~~ 220 (389)
+.+.+||..+.+.+.++. . ...-..++ +++. .|+.+..++.|.++|..+.+ .+..+.. ... .++.+
T Consensus 116 ~~v~V~D~~Tl~~~~ti~-~-~~eGwGLt--~Dg~-~L~vSdGs~~l~~iDp~T~~----v~~~I~V~~~g~~v~~lNeL 186 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTR-Y-SGEGWGLC--YWNG-KLVRSDGGTMLTFHEPDGFA----LVGAVQVKLRGQPVELINEL 186 (268)
T ss_dssp CEEEEEETTTTEEEEEEE-C-SSCCCCEE--EETT-EEEEECSSSEEEEECTTTCC----EEEEEECEETTEECCCEEEE
T ss_pred CEEEEEECCcCcEEEEEe-C-CCceeEEe--cCCC-EEEEECCCCEEEEEcCCCCe----EEEEEEeCCCCccccccccc
Confidence 999999999999999987 2 22223444 4564 66666678999999998642 2333222 222 34567
Q ss_pred EEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccC-CccCCCCCceeeecccCCCCeEEEEEe
Q 016457 221 GFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASD-SWTLDDVDYFVDCHYPGEGENLWVIGG 289 (389)
Q Consensus 221 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~l~~g 289 (389)
.|. ++.+.+..-.++.|.+.|..+++.+..+......... .......+-.+.++++|+++++ ++||
T Consensus 187 e~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rl-fVTG 253 (268)
T 3nok_A 187 ECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRI-FMTG 253 (268)
T ss_dssp EEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCE-EEEE
T ss_pred EEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEE-EEeC
Confidence 775 5555555546789999999999999888743111000 0001122467889999988874 5666
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.95 E-value=5.7e-06 Score=72.25 Aligned_cols=239 Identities=8% Similarity=-0.052 Sum_probs=147.8
Q ss_pred EEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEE
Q 016457 42 FEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVT 121 (389)
Q Consensus 42 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 121 (389)
.|.+..+.. +|+.+. ...|+.+++...+....+.. ......++|.+.+. .++++-...+.|..+++........+.
T Consensus 80 ~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~-~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 80 SCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRE-LVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp CEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred eECCccccc-eeEeec-CccceeeccCCCcEEEEecC-CCccEEEEEecCCC-eEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 355555533 454444 46788888876554444443 34578999997652 455555567889999987665444444
Q ss_pred cCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC-CcEEEEecCC
Q 016457 122 AGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD-GLICTFDTGG 199 (389)
Q Consensus 122 ~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~ 199 (389)
........+++.+.++.|+.+.. .+.|.+.++........+. ........|+++|.+..++++-... +.|..+++..
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~-~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec-CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 33345678899877777776655 6789998876443332232 3335678999999775455554445 7899998874
Q ss_pred CCCCCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeeccc
Q 016457 200 DINDDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYP 278 (389)
Q Consensus 200 ~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 278 (389)
.. ...+. ..-.....+++++.++.++++-+..+.|..+|+........+.. .......+++.
T Consensus 235 ~~-----~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~------------~~~~P~giav~ 297 (386)
T 3v65_B 235 SG-----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ------------GLPHPFAITVF 297 (386)
T ss_dssp CS-----CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS------------SCSSEEEEEEE
T ss_pred CC-----cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC------------CCCCceEEEEE
Confidence 31 22221 22335688999966666666666778899999864333222221 11344566663
Q ss_pred CCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 279 GEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 279 ~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+.. +.++-...+.|..++..+++.
T Consensus 298 --~~~-ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 298 --EDS-LYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp --TTE-EEEEETTTTEEEEEETTTCCS
T ss_pred --CCE-EEEeeCCCCeEEEEECCCCcc
Confidence 233 445666778888888655543
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.94 E-value=2.6e-06 Score=81.84 Aligned_cols=282 Identities=13% Similarity=0.082 Sum_probs=169.5
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec--------------CCCCcEEEEEEeCCCCCCEEEEEecC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK--------------GHSSTVNQISFSGPSTPHVLHSCSSD 103 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--------------~~~~~v~~i~~~~~~~~~~l~s~~~d 103 (389)
...|.++...++| .|.+|+..+-|.+++..+++...... -....|.++...+++ .|..|+.+
T Consensus 257 ~~~i~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g---~lWigt~~ 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDN-KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN---NIWIGTWG 332 (781)
T ss_dssp CCCEEEEEECTTS-EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSC---CEEEEEBS
T ss_pred CceEEEEEECCCC-CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCC---CEEEEecC
Confidence 4568899888887 56667765668889987654322111 134579999888776 57778877
Q ss_pred CeEEEEEccCCeEEEEEE------c---CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee--ecccCCeeE
Q 016457 104 GTIRAWDTRSFHEVWSVT------A---GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE--ESHVEDVTQ 172 (389)
Q Consensus 104 g~i~iwd~~~~~~~~~~~------~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~~~~v~~ 172 (389)
+-|..++..+........ . ....|.++...+ .+.+.+++.++-|..||..++....... ......|.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 778999887554322111 0 235688998874 4567777767778999977543322111 123456889
Q ss_pred EEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee---ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 173 VHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI---NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
+...+++ .|..|+.++-+..+|..++. ...+. .....|.++... .++ .|..++. +-|..||..+++.
T Consensus 412 i~~d~~g--~lWigt~~~Gl~~~~~~~~~-----~~~~~~~~~~~~~v~~i~~d-~~g-~lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 412 SLKDSEG--NLWFGTYLGNISYYNTRLKK-----FQIIELEKNELLDVRVFYED-KNK-KIWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp EEECTTS--CEEEEETTEEEEEECSSSCE-----EEECCSTTTCCCCEEEEEEC-TTS-EEEEEET-TEEEEEESSSSSC
T ss_pred EEECCCC--CEEEEeccCCEEEEcCCCCc-----EEEeccCCCCCCeEEEEEEC-CCC-CEEEEEC-CceEEEeCCCCeE
Confidence 9888777 46667777779999987432 11111 123567787776 444 4666666 5688999887654
Q ss_pred eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecc---cceeeeec
Q 016457 250 VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGG---HTAVVRSV 326 (389)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~ 326 (389)
........ . . .....|.++...++|. + ..|+.++-|..|+..+++. ..+... ....|.++
T Consensus 482 ~~~~~~~~-~--~----~~~~~i~~i~~d~~g~--l-Wigt~~~Gl~~~~~~~~~~-------~~~~~~~~l~~~~i~~i 544 (781)
T 3v9f_A 482 IHHYDTSN-S--Q----LLENFVRSIAQDSEGR--F-WIGTFGGGVGIYTPDMQLV-------RKFNQYEGFCSNTINQI 544 (781)
T ss_dssp CEEECTTT-S--S----CSCSCEEEEEECTTCC--E-EEEESSSCEEEECTTCCEE-------EEECTTTTCSCSCEEEE
T ss_pred EecccCcc-c--c----cccceeEEEEEcCCCC--E-EEEEcCCCEEEEeCCCCeE-------EEccCCCCCCCCeeEEE
Confidence 43222110 0 0 0135688888888775 3 3344433477788766543 222211 12356666
Q ss_pred cCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 327 LPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 327 ~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..+++|.+.++.. +|.|..|+....
T Consensus 545 ---------~~d~~g~lWi~T~-~Glv~~~d~~~~ 569 (781)
T 3v9f_A 545 ---------YRSSKGQMWLATG-EGLVCFPSARNF 569 (781)
T ss_dssp ---------EECTTSCEEEEET-TEEEEESCTTTC
T ss_pred ---------EECCCCCEEEEEC-CCceEEECCCCC
Confidence 6667777655444 666577776543
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.94 E-value=1e-05 Score=68.62 Aligned_cols=227 Identities=11% Similarity=0.058 Sum_probs=143.3
Q ss_pred CCCeEEEEecCc--eeeeeecCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCC----ceeeeeecCCCCcEEEEEEeCC
Q 016457 19 NVNSIKRFGLKN--SIQTNFGDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVT----GQYSGECKGHSSTVNQISFSGP 91 (389)
Q Consensus 19 ~~~~i~~w~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~i~~~~~ 91 (389)
....|+..++.. ....+.....+.+++|++++..|+.+ ..++.|..+++.. ......+...-.....+++.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 445688888763 22223335667899999876555555 4468999999875 2222223222245578888865
Q ss_pred CCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC--CeEEEEECcCCceeeeeeecccCC
Q 016457 92 STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG--SQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 92 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+. .++++-...+.|.+.++........+.........++++|.++.|+.+... +.|...++. +.....+....-..
T Consensus 88 ~~-~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~ 165 (316)
T 1ijq_A 88 HS-NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQW 165 (316)
T ss_dssp TT-EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSC
T ss_pred CC-eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCC
Confidence 42 455665677899999987544433344344678899999988888877653 688888875 33333332123345
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec---cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN---VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
...|++++++..++++-+..+.|..+|+.... ...+.. .-.....+++. .+.++++-...+.|..++..+
T Consensus 166 P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-----~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-----RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEeccCCEEEEEECCCCeEEEEecCCCc-----eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCC
Confidence 78999998876455555567789999998421 222211 12345677775 355666666778999999877
Q ss_pred CceeEEee
Q 016457 247 GQNVASFE 254 (389)
Q Consensus 247 ~~~~~~~~ 254 (389)
++.+..+.
T Consensus 239 g~~~~~i~ 246 (316)
T 1ijq_A 239 GSDVNLLA 246 (316)
T ss_dssp CCCCEEEE
T ss_pred CcceEEEe
Confidence 77665554
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.92 E-value=1.6e-05 Score=67.39 Aligned_cols=232 Identities=8% Similarity=-0.061 Sum_probs=140.6
Q ss_pred eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC----CeEEEEEEcCCCCe
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS----FHEVWSVTAGSQEI 127 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~~v 127 (389)
+|+.+. ...|+..|+.+.+....+. .......++|.+.+. .++++-...+.|..+++.. ......+...-...
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~-~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASN-RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCC-EEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 344444 3568999988776555444 345678999998652 4555555678999999875 22222233223456
Q ss_pred EEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC-CcEEEEecCCCCCCCc
Q 016457 128 FCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD-GLICTFDTGGDINDDD 205 (389)
Q Consensus 128 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~ 205 (389)
..+++.+.++.++.+.. .+.|.++|+........+. ........++++|.+..++++.... +.|..+++....
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---- 154 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---- 154 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----
Confidence 78999876777776644 7899999987543322222 3345678999999765344444333 688888887321
Q ss_pred cceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 206 LLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 206 ~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
...+. ..-.....+++++.++.++++-+..+.|..+|+.. .....+.... ........+++. +..
T Consensus 155 -~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~---------~~~~~P~giav~--~~~- 220 (316)
T 1ijq_A 155 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDE---------KRLAHPFSLAVF--EDK- 220 (316)
T ss_dssp -EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECT---------TTTSSEEEEEEE--TTE-
T ss_pred -eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecC---------CccCCcEEEEEE--CCE-
Confidence 11121 12345789999955565666666677999999874 3333332210 011334566664 343
Q ss_pred EEEEecCCceEEEEEeccCCc
Q 016457 285 WVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+.++-...+.|..++..+++.
T Consensus 221 ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 221 VFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEETTTTEEEEEETTTCCC
T ss_pred EEEEECCCCeEEEEeCCCCcc
Confidence 345666778899998766654
No 266
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.92 E-value=5.1e-06 Score=79.88 Aligned_cols=278 Identities=14% Similarity=0.029 Sum_probs=166.2
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecC-------CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEc
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKG-------HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT 111 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~ 111 (389)
..|.++...+++. |.+|+.+ -+.+||..+++....... ....|.++...+++ .|..|+..+-|.++|.
T Consensus 211 ~~i~~i~~d~~g~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g---~lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 211 NDVRCIYKDTNGN-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDN---KLWIATELNGIMILDL 285 (781)
T ss_dssp SSEEEEEECTTCC-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTS---EEEEEESSSCEEEEET
T ss_pred CceeEEEEcCCCC-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCC---CEEEEeCCCCeEEECC
Confidence 4688888888875 4455555 689999876654322111 23569999888776 6777777456888998
Q ss_pred cCCeEEEEEE--------------cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee---------ecccC
Q 016457 112 RSFHEVWSVT--------------AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE---------ESHVE 168 (389)
Q Consensus 112 ~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~---------~~~~~ 168 (389)
.++....... .....|.++...+ .+.+.+++.++-|..++..+..... +. .....
T Consensus 286 ~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 286 QQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIGTWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNK 363 (781)
T ss_dssp TCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEEEBSSCEEEECSSCCSCEE-EC----CCCSSCCSSS
T ss_pred CCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEEecCCeEEEeCCCCCccee-eccCccccccCCCCCc
Confidence 7665432221 1245789999884 5567788877888999877543221 11 01235
Q ss_pred CeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccce-eeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCC
Q 016457 169 DVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLE-SVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
.|.++...+++ .|..|+.++-|..||..++.. .... ........|.++... .++ .|.+|+.++-|..++..++
T Consensus 364 ~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~~v~~i~~d-~~g-~lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 364 VVSSVCDDGQG--KLWIGTDGGGINVFENGKRVA--IYNKENRELLSNSVLCSLKD-SEG-NLWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp CEEEEEECTTS--CEEEEEBSSCEEEEETTEEEE--ECC-----CCCSBEEEEEEC-TTS-CEEEEETTEEEEEECSSSC
T ss_pred ceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeE--EEccCCCCCCCcceEEEEEC-CCC-CEEEEeccCCEEEEcCCCC
Confidence 68999988877 466777677799999874310 0110 001133567888775 444 4667887777889998766
Q ss_pred ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEeccc-----cee
Q 016457 248 QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGH-----TAV 322 (389)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h-----~~~ 322 (389)
+.. .+... . .....|.++...+++. + ..|+.. -|..|+..+++. ..+.... ...
T Consensus 438 ~~~-~~~~~-~--------~~~~~v~~i~~d~~g~-l--wigt~~-Gl~~~~~~~~~~-------~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 438 KFQ-IIELE-K--------NELLDVRVFYEDKNKK-I--WIGTHA-GVFVIDLASKKV-------IHHYDTSNSQLLENF 496 (781)
T ss_dssp EEE-ECCST-T--------TCCCCEEEEEECTTSE-E--EEEETT-EEEEEESSSSSC-------CEEECTTTSSCSCSC
T ss_pred cEE-EeccC-C--------CCCCeEEEEEECCCCC-E--EEEECC-ceEEEeCCCCeE-------EecccCcccccccce
Confidence 433 33211 0 0235688888877764 3 334444 488899887654 2222111 245
Q ss_pred eeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccC
Q 016457 323 VRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDD 360 (389)
Q Consensus 323 v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~ 360 (389)
|.++ ..+++|.+.+....+| |..|+.+.
T Consensus 497 i~~i---------~~d~~g~lWigt~~~G-l~~~~~~~ 524 (781)
T 3v9f_A 497 VRSI---------AQDSEGRFWIGTFGGG-VGIYTPDM 524 (781)
T ss_dssp EEEE---------EECTTCCEEEEESSSC-EEEECTTC
T ss_pred eEEE---------EEcCCCCEEEEEcCCC-EEEEeCCC
Confidence 6666 6677777554433244 55666543
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.91 E-value=1.1e-05 Score=69.28 Aligned_cols=226 Identities=8% Similarity=-0.014 Sum_probs=141.1
Q ss_pred CCeEEEEecCc-eeeeee-cCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCE
Q 016457 20 VNSIKRFGLKN-SIQTNF-GDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHV 96 (389)
Q Consensus 20 ~~~i~~w~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 96 (389)
...|+..++.. ....+. ....+..++|++....|+.+ ...+.|..+++..+.....+.........+++.+.+. .+
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g-~l 130 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD-KL 130 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT-EE
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCC-eE
Confidence 34566666543 222222 24557899999866666555 4578899999876543333332334457888887552 45
Q ss_pred EEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec-C-CeEEEEECcCCceeeeeeecccCCeeEEE
Q 016457 97 LHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-G-SQIQFWDWRNKKQVACLEESHVEDVTQVH 174 (389)
Q Consensus 97 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 174 (389)
+++-...+.|.+.++........+...-.....++++|.++.|+.+.. . +.|..+++... ....+....-.....|+
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla 209 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLT 209 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEE
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEE
Confidence 566666788999998754333333333466789999998888887765 4 78888887643 33333212334578999
Q ss_pred EecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEe
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF 253 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 253 (389)
++|++..++++-...+.|..+|+.... ...+. ........+++. ++.++++-...+.|..++..+++....+
T Consensus 210 ~d~~~~~lY~aD~~~~~I~~~~~dG~~-----~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 210 IDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCc-----eEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 998775455665667889999987421 11111 123345677774 3456666666778888886666655554
Q ss_pred e
Q 016457 254 E 254 (389)
Q Consensus 254 ~ 254 (389)
.
T Consensus 283 ~ 283 (349)
T 3v64_C 283 R 283 (349)
T ss_dssp E
T ss_pred c
Confidence 4
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.89 E-value=4.9e-06 Score=72.63 Aligned_cols=227 Identities=8% Similarity=-0.008 Sum_probs=143.1
Q ss_pred CCCeEEEEecCc-eeeeee-cCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCC
Q 016457 19 NVNSIKRFGLKN-SIQTNF-GDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPH 95 (389)
Q Consensus 19 ~~~~i~~w~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~ 95 (389)
....|+..++.. ....+. ....+..++|++.+..|+.+ ...+.|..+++..+.....+.........+++.+.+. .
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g-~ 172 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD-K 172 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT-E
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC-e
Confidence 345667666653 222222 35568899999866555544 4578899999876544333332333456788887552 4
Q ss_pred EEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec-C-CeEEEEECcCCceeeeeeecccCCeeEE
Q 016457 96 VLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC-G-SQIQFWDWRNKKQVACLEESHVEDVTQV 173 (389)
Q Consensus 96 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~v~~~ 173 (389)
++++-...+.|.+.++........+...-.....++++|.++.|+.+.. . +.|..+++... ....+....-.....|
T Consensus 173 lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGl 251 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGL 251 (386)
T ss_dssp EEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEE
T ss_pred EEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeE
Confidence 5566566778888887654433333333467889999998888888765 3 68888887643 3333321233457899
Q ss_pred EEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEE
Q 016457 174 HFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVAS 252 (389)
Q Consensus 174 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 252 (389)
+++|++..++++-+..+.|..+|+.... ...+. ........+++. ++.++++....+.|..++..+++....
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKHHVIERANLDGSH-----RKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp EEEGGGTEEEEEETTTTEEEEECTTSCS-----CEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCe-----eEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 9998775456666667889999987421 12221 123345677774 345666666778888888767766655
Q ss_pred ee
Q 016457 253 FE 254 (389)
Q Consensus 253 ~~ 254 (389)
+.
T Consensus 325 i~ 326 (386)
T 3v65_B 325 IR 326 (386)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.89 E-value=4e-06 Score=71.35 Aligned_cols=237 Identities=9% Similarity=0.071 Sum_probs=141.7
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC--------------------CCCeEEEEEeCCCCeEEE
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG--------------------SQEIFCFSFGGSTDYLLA 141 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~l~~ 141 (389)
...+++|.+++ .+++++..++.|..|+..+++.. .+... ...+.++++.+.++.|++
T Consensus 20 ~p~~i~~d~~g--~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 20 APNSFTFDSTN--KGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCCCEECCTTC--SSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CceEEEEcCCC--CEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 45678898887 67888888999999998765433 23211 135788999975667777
Q ss_pred eecCCeEEEEECcCCceeeeee---ec-ccCCeeEEEEec-CCCCeEEEEeC-----------------CCcEEEEecCC
Q 016457 142 AGCGSQIQFWDWRNKKQVACLE---ES-HVEDVTQVHFVP-NNQNKVVSASV-----------------DGLICTFDTGG 199 (389)
Q Consensus 142 ~~~d~~i~iwd~~~~~~~~~~~---~~-~~~~v~~~~~~~-~~~~~l~~~~~-----------------d~~i~i~d~~~ 199 (389)
+...+.|..+|..++.. ..+. .+ .......+++.+ +|. ++++-.. ++.|..||..+
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 76666688898765532 2221 01 113467899999 884 6665432 36788888764
Q ss_pred CCCCCccceeeeccCCceeeEEEecCCCcEEEEE-ecCCcEEEEEcCCCc--eeEEeecccccccCCccCCCCCceeeec
Q 016457 200 DINDDDLLESVINVGTSVGKVGFFGETNKHLWCL-THIETLSIWDWKDGQ--NVASFENARSLASDSWTLDDVDYFVDCH 276 (389)
Q Consensus 200 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 276 (389)
+. +......-.....++++ ++++.|+++ +..+.|.+|++.... ....+... .. ...++
T Consensus 175 ~~-----~~~~~~~~~~p~gia~~-~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~------------~g-P~gi~ 235 (322)
T 2fp8_A 175 KE-----TTLLLKELHVPGGAEVS-ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI------------PN-PGNIK 235 (322)
T ss_dssp TE-----EEEEEEEESCCCEEEEC-TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC------------SS-EEEEE
T ss_pred CE-----EEEeccCCccCcceEEC-CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC------------CC-CCCeE
Confidence 32 22222222345678998 666655554 566899999987531 11222211 12 56788
Q ss_pred ccCCCCeEEEEEec---------CCceEEEEEeccCCccccCCCeEEEeccc---ceeeeeccCCCcccCCCCCCCceeE
Q 016457 277 YPGEGENLWVIGGT---------GAGTVGYFPVNYGGAATIGPPEAVLVGGH---TAVVRSVLPMPSVQGRPAQSHGIFG 344 (389)
Q Consensus 277 ~~~~~~~~~l~~g~---------~dg~i~i~~~~~~~~~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~~s~~~~~l 344 (389)
+.++|. +|++... ..+.|..++.. ++. +..+.... -..+..+ ++ .+++++
T Consensus 236 ~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~------~~~~~~~~g~~~~~~~~~---------~~-~~g~L~ 297 (322)
T 2fp8_A 236 RNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNI------LEVIPLPPPFAGEHFEQI---------QE-HDGLLY 297 (322)
T ss_dssp ECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCE------EEEEECCTTTTTSCCCEE---------EE-ETTEEE
T ss_pred ECCCCC-EEEEecCcccccccCCCccEEEEECCC-CCE------EEEEECCCCCccccceEE---------EE-eCCEEE
Confidence 999886 4554433 14667778764 332 33333111 1123333 33 466666
Q ss_pred EEecCCCeEEEEeccC
Q 016457 345 WTGGEDGRLCCWLSDD 360 (389)
Q Consensus 345 ~s~~~dg~v~iW~~~~ 360 (389)
++....+.|..++++.
T Consensus 298 v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 298 IGTLFHGSVGILVYDK 313 (322)
T ss_dssp EECSSCSEEEEEEC--
T ss_pred EeecCCCceEEEeccc
Confidence 7777788899998763
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.86 E-value=7.5e-06 Score=66.27 Aligned_cols=204 Identities=7% Similarity=0.038 Sum_probs=132.8
Q ss_pred eeeec-CcceEEEeecCCCCeEE-EEecCCeEEEEeCCCceeeeeecC-CCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 33 QTNFG-DDYVFEIVPKNDWSLMA-VSLSTNVVKLYSPVTGQYSGECKG-HSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 33 ~~~~~-~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
+.+.+ .+.+..++|+|+++.|+ +...++.|...|.. ++.+..+.- -....-.|++.+++ .++++.-.++.+.++
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g--~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN--QFVISDERDYAIYVI 96 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT--EEEEEETTTTEEEEE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC--EEEEEECCCCcEEEE
Confidence 34556 66799999999876555 56668889999987 887777632 22467888998877 566665567889999
Q ss_pred EccCCe---EEEEEEc------CCCCeEEEEEeCCCCeEEEeecCCeEEEEECc---CCceeeeee------ecccCCee
Q 016457 110 DTRSFH---EVWSVTA------GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWR---NKKQVACLE------ESHVEDVT 171 (389)
Q Consensus 110 d~~~~~---~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~~~------~~~~~~v~ 171 (389)
++.... .+..... .+.....++|+|.++.|+++.......+|.+. ....+..+. ..+...+.
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 876543 2233321 24557899999999899888875554555543 111122221 01234578
Q ss_pred EEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec-c------CCceeeEEEecCCCcEEEEEecCCcEEEEEc
Q 016457 172 QVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN-V------GTSVGKVGFFGETNKHLWCLTHIETLSIWDW 244 (389)
Q Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~------~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~ 244 (389)
.++++|....+++....++.+.++|..... .....+.. . -.....|+|. ++++ |+..++-+.++.|.-
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g~~---~~~~~L~~g~~~l~~~~~qpEGia~d-~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVGEV---IGEMSLTKGSRGLSHNIKQAEGVAMD-ASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCE---EEEEECSTTGGGCSSCCCSEEEEEEC-TTCC-EEEEETTTEEEEEEC
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCCCE---EEEEEcCCccCCcccccCCCCeeEEC-CCCC-EEEEcCCceEEEEEe
Confidence 999999886677777778889999988431 11111111 0 1256789999 6776 555577777766653
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.86 E-value=1.5e-05 Score=64.46 Aligned_cols=215 Identities=9% Similarity=0.123 Sum_probs=134.9
Q ss_pred eecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEeecCCeEEEEEC
Q 016457 75 ECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGCGSQIQFWDW 153 (389)
Q Consensus 75 ~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 153 (389)
.+.+-.+.+..++|.|++. .++++...++.|...|.. ++.+..+... ......+++.+++..+++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~-~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSN-TLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTT-EEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCC-EEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4455556799999999863 455567788899999987 8888887643 367889999866654444444788999987
Q ss_pred cCCce---eeeee-----ecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-------ccCCcee
Q 016457 154 RNKKQ---VACLE-----ESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-------NVGTSVG 218 (389)
Q Consensus 154 ~~~~~---~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~~i~ 218 (389)
..... +.... .........|+|+|.+. .|+++.......+|.+.. ......+.... ..-..+.
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g-~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNG-LLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEES-TTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcc-cccCCceeeecchhhccccccCCce
Confidence 65432 22221 02344568999999985 666666655555555541 11111111111 1123568
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEE
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYF 298 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~ 298 (389)
++++.|..+.+++.+...+.|..+|.. ++.+..+.-.+...... ......-.++|.++|+ +|| + ++-..+++|
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~---~~~~qpEGia~d~~G~-lyI-v-sE~n~~y~f 249 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLS---HNIKQAEGVAMDASGN-IYI-V-SEPNRFYRF 249 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCS---SCCCSEEEEEECTTCC-EEE-E-ETTTEEEEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcc---cccCCCCeeEECCCCC-EEE-E-cCCceEEEE
Confidence 999998888888888888899999965 66665554321110000 0113567899999986 443 3 455666666
Q ss_pred Ee
Q 016457 299 PV 300 (389)
Q Consensus 299 ~~ 300 (389)
.-
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.84 E-value=3.5e-05 Score=67.58 Aligned_cols=229 Identities=10% Similarity=0.027 Sum_probs=143.2
Q ss_pred CCeEEEEecCce-eeeee-cCcceEEEeecCCCCeEEEEe-cCCeEEEEeCCCc----eeeeeecCCCCcEEEEEEeCCC
Q 016457 20 VNSIKRFGLKNS-IQTNF-GDDYVFEIVPKNDWSLMAVSL-STNVVKLYSPVTG----QYSGECKGHSSTVNQISFSGPS 92 (389)
Q Consensus 20 ~~~i~~w~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~~~~~ 92 (389)
...|+..++... ...+. ....+..++|++....|+.+. ..+.|+.+++... .....+.........+++.+.+
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~ 170 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 170 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTT
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecC
Confidence 456666666532 22222 356788999998666665554 4688999988652 2223333334567788988744
Q ss_pred CCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCCe
Q 016457 93 TPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVEDV 170 (389)
Q Consensus 93 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~v 170 (389)
. .++++-...+.|.+.++........+...-.....|+++|.++.|+.+.. .+.|...++.... ...+....-...
T Consensus 171 ~-~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~~~~l~~P 248 (400)
T 3p5b_L 171 S-NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 248 (400)
T ss_dssp T-EEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEEECSSCSCE
T ss_pred C-ceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEEEECCCCce
Confidence 2 46666666789999998765544445444456889999998888887764 4789888876433 333321233567
Q ss_pred eEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCcee
Q 016457 171 TQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNV 250 (389)
Q Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 250 (389)
..|++++.+..++++-...+.|..+|+.... ...+......-.....+++. .+.++++-...+.|..+|..+++.+
T Consensus 249 ~glavd~~~~~lY~aD~~~~~I~~~d~dG~~--~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCC--CEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEEEEeCCCEEEEEECCCCEEEEEeCCCCc--cEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCce
Confidence 8999998876345555567789999987431 11111111112344567764 3456667777788999997777766
Q ss_pred EEee
Q 016457 251 ASFE 254 (389)
Q Consensus 251 ~~~~ 254 (389)
..+.
T Consensus 325 ~~i~ 328 (400)
T 3p5b_L 325 NLLA 328 (400)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.84 E-value=3.2e-07 Score=86.25 Aligned_cols=243 Identities=12% Similarity=0.005 Sum_probs=132.0
Q ss_pred EEeecC-CCCeEEEEecCC-----------eEEEEeCCCceee--eeecC-CCCcEEEEEEeCCCCCCEEEEEec-CCeE
Q 016457 43 EIVPKN-DWSLMAVSLSTN-----------VVKLYSPVTGQYS--GECKG-HSSTVNQISFSGPSTPHVLHSCSS-DGTI 106 (389)
Q Consensus 43 ~~~~~~-~~~~l~~~~~d~-----------~i~iw~~~~~~~~--~~~~~-~~~~v~~i~~~~~~~~~~l~s~~~-dg~i 106 (389)
++++.+ ++++++.|+.+. .+.+||+.+++-. ..+.. +.....++++..++ .+++.|+. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g--~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG--QIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS--CEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC--CEEEeCCCCCCce
Confidence 566777 888888887542 6889999877532 22221 23334456777788 68888884 4589
Q ss_pred EEEEccCCeEEEEEEcCCC-CeEEEEEeCCCCeEEEee-cC-----CeEEEEECcCCceeeee----eecccCCeeEEEE
Q 016457 107 RAWDTRSFHEVWSVTAGSQ-EIFCFSFGGSTDYLLAAG-CG-----SQIQFWDWRNKKQVACL----EESHVEDVTQVHF 175 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----~~i~iwd~~~~~~~~~~----~~~~~~~v~~~~~ 175 (389)
.+||..+.+-...-..+.. .-.+++..+++..++.+| .+ ..+.+||..+++-...- . .....-....+
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~-p~~~~~~~~~~ 346 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN-PMLTADKQGLY 346 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG-GGCCCCTTGGG
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc-cccccccccee
Confidence 9999987754432111211 122344555777777777 33 57999999876532210 0 00000000111
Q ss_pred ecCCCCeEEEEeCCC---------cEEEEecCCCCCCCccceeeecc---------CCceeeEEEecCCCcEEEEEecCC
Q 016457 176 VPNNQNKVVSASVDG---------LICTFDTGGDINDDDLLESVINV---------GTSVGKVGFFGETNKHLWCLTHIE 237 (389)
Q Consensus 176 ~~~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~l~~~~~d~ 237 (389)
..++. .++.|+.+| .+..||..+.. ........ ...-.++.+...++++++.|+.++
T Consensus 347 ~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~----w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 347 RSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSG----DVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTC----EEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred ecCCc-eEEEECCCCcEEEecCccceeeeecCCcc----eeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 23332 555555444 46778887432 11111111 112234444334677888887542
Q ss_pred -----------cEEEEEcCCCceeEEe-ecccccccCCccCCCCCceeeecccCCCCeEEEEEecCC-----------ce
Q 016457 238 -----------TLSIWDWKDGQNVASF-ENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGA-----------GT 294 (389)
Q Consensus 238 -----------~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~d-----------g~ 294 (389)
.|.+||..+..-.... .... ....-.+++..|+++ +++.|+.+ ..
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp----------~~R~~~~~~~l~~g~--i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFASNGLY----------FARTFHTSVVLPDGS--TFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEECTTCCS----------SCCBSCEEEECTTSC--EEEECCBSBCCTTCCCSBCCC
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEccCCCC----------CCcccCCeEECCCCC--EEEECCcccCcCcCCCCcccc
Confidence 5778887765543322 0110 111223445567777 66777654 46
Q ss_pred EEEEEeccCCc
Q 016457 295 VGYFPVNYGGA 305 (389)
Q Consensus 295 i~i~~~~~~~~ 305 (389)
+.+||..+.+.
T Consensus 490 v~~ydp~t~~W 500 (656)
T 1k3i_A 490 PEIYVPEQDTF 500 (656)
T ss_dssp CEEEEGGGTEE
T ss_pred eEEEcCCCCce
Confidence 88999887653
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.83 E-value=5.6e-06 Score=73.32 Aligned_cols=255 Identities=9% Similarity=-0.017 Sum_probs=140.5
Q ss_pred ceEEEeecC-CCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEec-CC----eEEEEEccC
Q 016457 40 YVFEIVPKN-DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS-DG----TIRAWDTRS 113 (389)
Q Consensus 40 ~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~-dg----~i~iwd~~~ 113 (389)
....++++| ++..|+++...+.|+.+|++.++...... .......|+|.+++ +.|+.+.. ++ .+...+. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G--~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEA--DSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTS--SEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCC--CEEEEEeCCCCcccceEEEEeC-C
Confidence 356889998 45567766655889999988765444333 45567899999998 65555543 22 2333443 3
Q ss_pred CeEE--EEEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 114 FHEV--WSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 114 ~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+... ..+.. ......++++|.++.|+++.. ++.|..+|...+................|+|+|++..++++-...+
T Consensus 214 g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 214 SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 3221 23332 245677889985666666654 7899999988665422222122245788999999952555556678
Q ss_pred cEEEEecCCCCCCCccceeeecc---------------CCcee-eEEEec-------CCCcEEEEEecCCcEEEEEcCCC
Q 016457 191 LICTFDTGGDINDDDLLESVINV---------------GTSVG-KVGFFG-------ETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~---------------~~~i~-~~~~~~-------~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
.|..++.............+.+. -.... .++..+ .++.++++-...+.|+.++ .++
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G 371 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQG 371 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTS
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCC
Confidence 89998876321111111111111 01122 444431 2345555555667888888 345
Q ss_pred ceeEEeeccc-cccc---C-CccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 248 QNVASFENAR-SLAS---D-SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 248 ~~~~~~~~~~-~~~~---~-~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
.......... .... . .-....-.....+++++++.. ++++-..+..|+.++++
T Consensus 372 ~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 372 RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEEREC-FFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEEC
T ss_pred cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCE-EEEEECCCCeEEEEccC
Confidence 4333322100 0000 0 000001134677888885443 34455556677777654
No 275
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.81 E-value=6.9e-06 Score=78.34 Aligned_cols=193 Identities=10% Similarity=0.060 Sum_probs=116.6
Q ss_pred ceEEEeec-CCCCeEEEEecC-C----eEEEEeCCCc-eeeee-ecCCCCcEEEEEEeCCCCCCEEEEEecC-----CeE
Q 016457 40 YVFEIVPK-NDWSLMAVSLST-N----VVKLYSPVTG-QYSGE-CKGHSSTVNQISFSGPSTPHVLHSCSSD-----GTI 106 (389)
Q Consensus 40 ~v~~~~~~-~~~~~l~~~~~d-~----~i~iw~~~~~-~~~~~-~~~~~~~v~~i~~~~~~~~~~l~s~~~d-----g~i 106 (389)
.+...+|| |||++||.+... | +|+++|+.++ +.+.. +. .....++|+|++ +.|+....| ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg--~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDH--TSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSST--TEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCC--CEEEEEEECCCCCCCEE
Confidence 57788999 999998876542 2 5999999988 63321 21 123578999999 566665554 257
Q ss_pred EEEEccCCe--EEEEEEcC-CCCeEEEEEeCCCCeEEEeec---CCeEEEEECcCCc-ee--eeeeecccCCeeEEEEec
Q 016457 107 RAWDTRSFH--EVWSVTAG-SQEIFCFSFGGSTDYLLAAGC---GSQIQFWDWRNKK-QV--ACLEESHVEDVTQVHFVP 177 (389)
Q Consensus 107 ~iwd~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~-~~--~~~~~~~~~~v~~~~~~~ 177 (389)
.++++.++. ....+... ......+.|+|++.+|+.... ...|.++|+.++. .. ..+.........++.|+.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 888887653 23333322 344678899999998887664 4578889988752 22 333323445556666655
Q ss_pred CCCCeEEEEeCC----CcEEEEecCCCCCCCcccee-eeccCC--ceeeEEEecCCCcEEEEEecCCc--EEEEEc
Q 016457 178 NNQNKVVSASVD----GLICTFDTGGDINDDDLLES-VINVGT--SVGKVGFFGETNKHLWCLTHIET--LSIWDW 244 (389)
Q Consensus 178 ~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~~l~~~~~d~~--i~i~d~ 244 (389)
.+ .+++....+ ..|..+|+.+. ..... +..+.. .+..+.+. ++.++++...++. |.++++
T Consensus 330 g~-~l~~~t~~~~a~~~~L~~~d~~~~----~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 TS-HLVILTNEGGAVNHKLLIAPRGQP----SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TT-EEEEEECTTTCTTCEEEEEETTST----TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred CC-EEEEEeCCCCCCCcEEEEEcCCCc----ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 43 244554443 25677776532 11122 222332 34555554 4456677777774 556665
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.80 E-value=1.4e-05 Score=70.88 Aligned_cols=255 Identities=8% Similarity=0.023 Sum_probs=140.1
Q ss_pred ceEEEeecCC--CCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC---Ce-EEEEEccC
Q 016457 40 YVFEIVPKND--WSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD---GT-IRAWDTRS 113 (389)
Q Consensus 40 ~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d---g~-i~iwd~~~ 113 (389)
....++|+|+ ...|+++...+.|+.++..+++...... .......+++.+++ +++++.... .. +...+...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG--~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNG--DMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTC--CEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCC--CEEEEcCCCCcccceEEEEECCC
Confidence 3568999985 4456666555899999988776654433 44568899999999 644443311 11 33333322
Q ss_pred CeE-EEEEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeee-eecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 114 FHE-VWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACL-EESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 114 ~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
+.. ...+.. -.....++++|.++.|+++.. ++.|+.+|..++.....+ ..+....-..|+|+|++..++++-...+
T Consensus 217 ~~~~~~~~~~-~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLCN-ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEEE-CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceeccccccc-cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 112222 245567889985666666654 789999998877653332 2112223347999999953555555678
Q ss_pred cEEEEecCCCCCCCccceeeecc---------------CCceeeEEEe--------cCCCcEEEEEecCCcEEEEEcCCC
Q 016457 191 LICTFDTGGDINDDDLLESVINV---------------GTSVGKVGFF--------GETNKHLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~~---------------~~~i~~~~~~--------~~~~~~l~~~~~d~~i~i~d~~~~ 247 (389)
.|..++.............+.+. -.....+++. ..++.++++-...+.|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 89998876321111111111111 1234568882 256666666666788999985 45
Q ss_pred ceeEEeecccc---c--ccC-CccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEec
Q 016457 248 QNVASFENARS---L--ASD-SWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVN 301 (389)
Q Consensus 248 ~~~~~~~~~~~---~--~~~-~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~ 301 (389)
. +.++.+... . ... .-....-.....++++|.... ++++-..+..|+.++++
T Consensus 375 ~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 R-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp E-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE-EEEEEGGGTEEEEEEEC
T ss_pred C-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE-EEEEeCCCCEEEEEecC
Confidence 3 333332211 0 000 000001133566777733332 34444456677776654
No 277
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.74 E-value=9.4e-05 Score=64.83 Aligned_cols=232 Identities=9% Similarity=-0.042 Sum_probs=142.2
Q ss_pred eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC----eEEEEEEcCCCCe
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAGSQEI 127 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v 127 (389)
+|+.+. ...|+..++........+. ....+..|+|.+.+. .++++-...+.|..+++... .....+.......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~-~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASN-RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTT-EEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccC-ceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 454444 5789999988665444443 456788999998652 34455456788988888652 2233333344678
Q ss_pred EEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC-CCcEEEEecCCCCCCCc
Q 016457 128 FCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV-DGLICTFDTGGDINDDD 205 (389)
Q Consensus 128 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~ 205 (389)
..+++.+.++.|+.+.. .+.|.+.++........+. ........|+++|.+..++++-.. .+.|...++....
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---- 236 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---- 236 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS----
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc----
Confidence 89999876777777655 7899999987554433333 344557899999976534444322 4789999887431
Q ss_pred cceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 206 LLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 206 ~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
...+. ..-.....+++++.++.+.++-+..+.|..+|+............. .......+++. ++.
T Consensus 237 -~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~----------~l~~P~gl~v~--~~~- 302 (400)
T 3p5b_L 237 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK----------RLAHPFSLAVF--EDK- 302 (400)
T ss_dssp -CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSS----------TTSSEEEEEEE--TTE-
T ss_pred -cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCC----------CCCCCEEEEEe--CCE-
Confidence 22221 1224678999995566555665667899999986443322222111 11234455553 344
Q ss_pred EEEEecCCceEEEEEeccCCc
Q 016457 285 WVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~ 305 (389)
++++-...+.|..++..+++.
T Consensus 303 lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 303 VFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp EEEEESSSCSEEEEESSSCCC
T ss_pred EEEecCCCCeEEEEEcCCCCc
Confidence 345556678898888766654
No 278
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.69 E-value=4e-05 Score=64.62 Aligned_cols=209 Identities=10% Similarity=-0.011 Sum_probs=119.0
Q ss_pred ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC--Ce
Q 016457 70 GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG--SQ 147 (389)
Q Consensus 70 ~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~ 147 (389)
.+.+..+... .....++|.+++ .++++-..++.|..||... +....+.. ......+++.+++..+++.... ..
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g--~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDG--TIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTS--CEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred ceEeEeCCCC-CCcceEEECCCC--CEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcce
Confidence 3444455432 457789999988 5666666788999999765 44444443 4678899999887744443332 24
Q ss_pred EEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCC----ccce--eeeccCCceeeEE
Q 016457 148 IQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDD----DLLE--SVINVGTSVGKVG 221 (389)
Q Consensus 148 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~--~~~~~~~~i~~~~ 221 (389)
|..+|..+++...............++..+.+ ..+++-..++.|+.+|..++.... .... .....-.....+
T Consensus 97 v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 77778777765432221122233455555544 245554468899999986421000 0000 000011123444
Q ss_pred EecCCCcEEEEEecCCcEEEEEcCC-Cce--eEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEE
Q 016457 222 FFGETNKHLWCLTHIETLSIWDWKD-GQN--VASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYF 298 (389)
Q Consensus 222 ~~~~~~~~l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~ 298 (389)
++..+.++++-...+.|..|++.. ++. ...+.. ......++++++|+ +.++....+.|.++
T Consensus 175 -s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-------------~~~P~gi~vd~dG~--l~va~~~~~~V~~~ 238 (306)
T 2p4o_A 175 -KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-------------QTNIDDFAFDVEGN--LYGATHIYNSVVRI 238 (306)
T ss_dssp -EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-------------SCCCSSEEEBTTCC--EEEECBTTCCEEEE
T ss_pred -CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-------------cCCCCCeEECCCCC--EEEEeCCCCeEEEE
Confidence 533334455555678999999874 321 111211 02356788899986 55666567889999
Q ss_pred Eec
Q 016457 299 PVN 301 (389)
Q Consensus 299 ~~~ 301 (389)
+..
T Consensus 239 ~~~ 241 (306)
T 2p4o_A 239 APD 241 (306)
T ss_dssp CTT
T ss_pred CCC
Confidence 865
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.68 E-value=8.8e-05 Score=62.74 Aligned_cols=228 Identities=8% Similarity=-0.018 Sum_probs=143.5
Q ss_pred CCCCeEEEEecCce---eee-eecCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceee-eeecCCCCcEEEEEEeCC
Q 016457 18 DNVNSIKRFGLKNS---IQT-NFGDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYS-GECKGHSSTVNQISFSGP 91 (389)
Q Consensus 18 ~~~~~i~~w~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~-~~~~~~~~~v~~i~~~~~ 91 (389)
+....|+..++... ... +.+...+.+++|++....|+.+ ...+.|..+++..+... ..+...-.....+++.+.
T Consensus 10 ~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 10 ANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp ECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred EccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 44567888887642 222 2224557789999865555444 45788999998765322 122222234667888864
Q ss_pred CCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCC
Q 016457 92 STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 92 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+. .++++-...+.|.++++........+.........+++.|.++.|+.+.. .+.|...++.. .....+....-..
T Consensus 90 ~g-~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~ 167 (318)
T 3sov_A 90 GE-KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYW 167 (318)
T ss_dssp TT-EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSC
T ss_pred CC-eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCC
Confidence 42 45566566788999998754333233334466789999988888888763 57888888763 3333332122345
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCc
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQ 248 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 248 (389)
...|+++|++..++++-+..+.|..+|+.... ...+. ........+++. .+.++++-...+.|..++..+++
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-----~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-----RQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-----eEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCC
Confidence 68999999775455565667889999987421 11121 123445677775 34566666667899999987787
Q ss_pred eeEEee
Q 016457 249 NVASFE 254 (389)
Q Consensus 249 ~~~~~~ 254 (389)
....+.
T Consensus 241 ~~~~i~ 246 (318)
T 3sov_A 241 GLREIH 246 (318)
T ss_dssp SCEEEE
T ss_pred ceEEEe
Confidence 665554
No 280
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.61 E-value=0.00017 Score=68.61 Aligned_cols=207 Identities=11% Similarity=0.041 Sum_probs=131.1
Q ss_pred CcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCc----eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc
Q 016457 38 DDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTG----QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR 112 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~ 112 (389)
...+..|+|++....|+.+ ...+.|+.+++... .....+.........|++.+.+. +++++-...+.|.+.++.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~-~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT-EEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCC-cEEEEecCCCeEEEEeCC
Confidence 5667899999865555544 44678998888642 22233332344567888887663 466666677899999987
Q ss_pred CCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 113 SFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 113 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
.......+...-.....|+++|.++.|+.+.. .+.|...++... ....+....-.....|++++.+..++++-...+
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 55444444444566899999998888888764 378998888643 333333133356889999987753455545567
Q ss_pred cEEEEecCCCCCCCccceeeec---cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEe
Q 016457 191 LICTFDTGGDINDDDLLESVIN---VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASF 253 (389)
Q Consensus 191 ~i~i~d~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 253 (389)
.|..+++.... ...+.. .-....+|++. .+.++++-...+.|...|..+++.+..+
T Consensus 581 ~I~~~d~dG~~-----~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 581 SISSIDVNGGN-----RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEEEETTSCS-----CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred cEEEEecCCCc-----eEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 89999987432 222211 11234566665 3355566666778888887777655554
No 281
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.61 E-value=0.00017 Score=61.02 Aligned_cols=229 Identities=9% Similarity=-0.022 Sum_probs=139.6
Q ss_pred eEEEEecCCeEEEEeCCCce--eeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE-EEEEEcCCCCeE
Q 016457 52 LMAVSLSTNVVKLYSPVTGQ--YSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE-VWSVTAGSQEIF 128 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~ 128 (389)
+|+.+. ...|+..++.... ....+. ......+++|.+.+. .++++-...+.|..+++..... ...+...-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~-~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHG-LIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGT-EEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCC-EEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 444443 4678999987653 222222 224567899998652 4555655678899999876532 122233334567
Q ss_pred EEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEe--CCCcEEEEecCCCCCCCc
Q 016457 129 CFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS--VDGLICTFDTGGDINDDD 205 (389)
Q Consensus 129 ~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~ 205 (389)
.+++.+.++.|+.+.. .+.|.++++........+. ........+++.|.+. .|+.+. ..+.|..+++....
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~~~~P~giavdp~~g-~ly~td~~~~~~I~r~~~dG~~---- 156 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-QELDQPRAIALDPSSG-FMYWTDWGEVPKIERAGMDGSS---- 156 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SSCSSEEEEEEEGGGT-EEEEEECSSSCEEEEEETTSCS----
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEe-CCCCCccEEEEeCCCC-EEEEEecCCCCEEEEEEcCCCC----
Confidence 8899877777776654 6899999986443222222 3445678999999765 444444 35788888887421
Q ss_pred cceeee-ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 206 LLESVI-NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 206 ~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
...+. ..-.....+++++.++.+.++-+..+.|..+|+... ....+... .......+++.. +.
T Consensus 157 -~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~~-----------~~~~P~glav~~--~~- 220 (318)
T 3sov_A 157 -RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVKG-----------SLPHPFALTLFE--DI- 220 (318)
T ss_dssp -CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECS-----------CCSCEEEEEEET--TE-
T ss_pred -eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEecC-----------CCCCceEEEEeC--CE-
Confidence 11221 122356889999556666666667789999998643 33333211 113345566643 33
Q ss_pred EEEEecCCceEEEEEeccCCc
Q 016457 285 WVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~ 305 (389)
++++-...+.|..++..+++.
T Consensus 221 lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 221 LYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEETTTTEEEEEETTTCCS
T ss_pred EEEEecCCCeEEEEECCCCCc
Confidence 445666778899999876654
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.56 E-value=1.7e-06 Score=81.57 Aligned_cols=230 Identities=11% Similarity=0.036 Sum_probs=137.3
Q ss_pred CCCeEEEEecCce-eeeee-cCcceEEEeecCCCCeEEEEe-cCCeEEEEeCCC----ceeeeeecCCCCcEEEEEEeCC
Q 016457 19 NVNSIKRFGLKNS-IQTNF-GDDYVFEIVPKNDWSLMAVSL-STNVVKLYSPVT----GQYSGECKGHSSTVNQISFSGP 91 (389)
Q Consensus 19 ~~~~i~~w~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~----~~~~~~~~~~~~~v~~i~~~~~ 91 (389)
....|+..++... ...+. ....+..++|++.+..|+.+. ..+.|+.+++.. ......+.........|++.+.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 4456777776532 22222 245677899998776666654 357899999875 2222222222223456777754
Q ss_pred CCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCC
Q 016457 92 STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 92 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+. .++++-...+.|.++++........+.........++++|.++.|+.+.. .+.|..+++... ....+....-..
T Consensus 464 ~g-~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~ 541 (699)
T 1n7d_A 464 HS-NIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQW 541 (699)
T ss_dssp SS-BCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSS
T ss_pred CC-cEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCC
Confidence 42 45566556788999998754433333322345678899988887777664 368888877533 222222122344
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
.+.|+|+|++..++++-+..+.|..+|+.+.. ...+............|++. . +.++++....+.|..++..+++.
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~--~~~~~~~~~~~~~P~glavd-~-~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN--RKTILEDEKRLAHPFSLAVF-E-DKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSC--CEEECCCSSSCSSCCCCEEE-T-TEEEEECSTTTCEEEEETTTEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCc--eEEEEecCCcCCCceEeEEE-C-CEEEEEeCCCCeEEEEEccCCCc
Confidence 67899999876566666677889999997421 11111111112334566775 3 35666666678999999888877
Q ss_pred eEEee
Q 016457 250 VASFE 254 (389)
Q Consensus 250 ~~~~~ 254 (389)
+..+.
T Consensus 618 ~~~i~ 622 (699)
T 1n7d_A 618 VNLLA 622 (699)
T ss_dssp EECCC
T ss_pred eEEee
Confidence 76664
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.56 E-value=0.00039 Score=66.10 Aligned_cols=232 Identities=9% Similarity=-0.035 Sum_probs=139.8
Q ss_pred eEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC----eEEEEEEcCCCCe
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAGSQEI 127 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~v 127 (389)
+|+.+. ...|+..++...+....+. ....+..|+|.+... .++++-...+.|+.+++... .....+.......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~-~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASN-RIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTT-EEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCC-eeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 444443 4568888887655444443 345678999998552 45555556678988888742 2233333334567
Q ss_pred EEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC-CcEEEEecCCCCCCCc
Q 016457 128 FCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD-GLICTFDTGGDINDDD 205 (389)
Q Consensus 128 ~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~ 205 (389)
..|++.+.++.|+.+.. .+.|.+.++........+. ........|+++|.+..++++-... +.|...++....
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---- 548 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---- 548 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----
Confidence 78999888878877765 7899999987544333332 3445688999999865344444333 679999887431
Q ss_pred cceeeec-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeE
Q 016457 206 LLESVIN-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENL 284 (389)
Q Consensus 206 ~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (389)
...+.. .-.....|++.+..+.++++-...+.|..+++........+.... .-.....+++. ++.+
T Consensus 549 -~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~----------~l~~P~glav~--~~~l 615 (791)
T 3m0c_C 549 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK----------RLAHPFSLAVF--EDKV 615 (791)
T ss_dssp -EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT----------TTSSEEEEEEE--TTEE
T ss_pred -eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCC----------ccCCCCEEEEe--CCEE
Confidence 222222 224678999996666666665666789999986443333332211 11233455553 3443
Q ss_pred EEEEecCCceEEEEEeccCCc
Q 016457 285 WVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~ 305 (389)
.++-...+.|...+..+++.
T Consensus 616 -YwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 616 -FWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp -EEEETTTTEEEEEETTTCCC
T ss_pred -EEEECCCCEEEEEeCCCCcc
Confidence 45555667888888666643
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.54 E-value=0.00027 Score=59.42 Aligned_cols=199 Identities=15% Similarity=0.223 Sum_probs=127.1
Q ss_pred CCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCC----CCC-CEEEEEe-c--CCeEEEEEcc--CCeEEE
Q 016457 49 DWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGP----STP-HVLHSCS-S--DGTIRAWDTR--SFHEVW 118 (389)
Q Consensus 49 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~----~~~-~~l~s~~-~--dg~i~iwd~~--~~~~~~ 118 (389)
...+++.....+-+.+||+ +|+.++.+.. +.++.+..-|. +.. .++++.. . +++|++|++. ++ .+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-cee
Confidence 3455665666788999999 7898888864 56777776652 110 0223333 3 5789999773 33 344
Q ss_pred EEEc------C-CCCeEEEEE--eCCCC--eEEEeecCCeEEEEECc-------CCceeeeeeecccCCeeEEEEecCCC
Q 016457 119 SVTA------G-SQEIFCFSF--GGSTD--YLLAAGCGSQIQFWDWR-------NKKQVACLEESHVEDVTQVHFVPNNQ 180 (389)
Q Consensus 119 ~~~~------~-~~~v~~~~~--~~~~~--~l~~~~~d~~i~iwd~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~ 180 (389)
.+.. . -..+..+++ +|..+ ++++...+|.+..|++. +.+.++++. ....+..+...+...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGMAADDEYG 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEEEEETTTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceEEEcCCCC
Confidence 4421 1 155666777 66544 57777789999999883 345677776 456788999998875
Q ss_pred CeEEEEeCCCcEEEEecCCCCCC-Cccceeee--ccCCceeeEEEec-CCCc-EEEEEe-cCCcEEEEEcC-CCceeEEe
Q 016457 181 NKVVSASVDGLICTFDTGGDIND-DDLLESVI--NVGTSVGKVGFFG-ETNK-HLWCLT-HIETLSIWDWK-DGQNVASF 253 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~--~~~~~i~~~~~~~-~~~~-~l~~~~-~d~~i~i~d~~-~~~~~~~~ 253 (389)
.|+.+-++.-|..|+.+..... ...+.... .....+..|++.+ ++++ +|++++ .++++.+||.. +.+.+..|
T Consensus 193 -~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 193 -RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp -EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred -eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 8999998877777775522111 11222221 1224678888752 3333 566655 57799999996 66777777
Q ss_pred e
Q 016457 254 E 254 (389)
Q Consensus 254 ~ 254 (389)
.
T Consensus 272 ~ 272 (355)
T 3amr_A 272 R 272 (355)
T ss_dssp E
T ss_pred E
Confidence 5
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00027 Score=62.84 Aligned_cols=257 Identities=7% Similarity=-0.023 Sum_probs=144.4
Q ss_pred eEEEeecC-CCCeEEEEec-CCeEEEEeCCCceeeeeecC---CCCcEEEEEE-------eCCCCCCEEEEEecCC----
Q 016457 41 VFEIVPKN-DWSLMAVSLS-TNVVKLYSPVTGQYSGECKG---HSSTVNQISF-------SGPSTPHVLHSCSSDG---- 104 (389)
Q Consensus 41 v~~~~~~~-~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~---~~~~v~~i~~-------~~~~~~~~l~s~~~dg---- 104 (389)
...|+|+| +...|+++.. .+.|++.|++++........ .......|+| .+++ ..|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G--~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA--EYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT--CEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC--CEEEEEeCCCCCcc
Confidence 46889998 3445555544 46799999887766544432 2235889999 9998 5566655443
Q ss_pred ---eEEEEEccC-CeEE-----EEEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECc-------CCce---------
Q 016457 105 ---TIRAWDTRS-FHEV-----WSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWR-------NKKQ--------- 158 (389)
Q Consensus 105 ---~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~-------~~~~--------- 158 (389)
.|.+.+... +... ..+... .....++++|.++.|+++.. ++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 255665333 1211 122221 23457888987777777665 7889999997 4443
Q ss_pred --eee-eeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc---C------------Ccee-e
Q 016457 159 --VAC-LEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV---G------------TSVG-K 219 (389)
Q Consensus 159 --~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---~------------~~i~-~ 219 (389)
... +..+.......|+|+|++..++++-+....|+.++.............+.+. . .... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 2212234568999999995245555667889987765221000000111111 0 1123 3
Q ss_pred EEEec------CCCcEEEEEecCCcEEEEEcCCCceeEEeeccccc----ccCCcc--------CCCCCceeeecccCC-
Q 016457 220 VGFFG------ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSL----ASDSWT--------LDDVDYFVDCHYPGE- 280 (389)
Q Consensus 220 ~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~~~~--------~~~~~~i~~~~~~~~- 280 (389)
++... .++.++++-.....|+.++ .++ .+.++.+.... ....|. ...-.....++++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 44431 3455666666778999998 456 44455432110 000000 001234567888886
Q ss_pred CCeEEEEEecCCceEEEEEeccCC
Q 016457 281 GENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 281 ~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
+. +.++=..+..|+.++++...
T Consensus 456 g~--lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 456 EM--FYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TE--EEEEETTTTEEEEEEECCCC
T ss_pred CE--EEEEeCCCCEEEEEECCCCc
Confidence 54 45566667788888887544
No 286
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.50 E-value=0.00029 Score=58.17 Aligned_cols=261 Identities=10% Similarity=0.092 Sum_probs=161.7
Q ss_pred eEEEEecCceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe
Q 016457 22 SIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS 101 (389)
Q Consensus 22 ~i~~w~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~ 101 (389)
+|.+.|+.+.....+..-.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- .+.|.-=.|-.+. .|+-.+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~---~L~lVT 124 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN---TVALVT 124 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS---EEEEEE
T ss_pred EEEEEECCCCCCccccccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC---eEEEEc
Confidence 566667654222221100011233588888888776 78999999999988888774 4677777887554 666665
Q ss_pred cCCeEEEEEccC-CeEEEEEEcC----CCCeEEEEEeCCCCeEEEeec-------CCeEEEEECcCCceeeeeeecccCC
Q 016457 102 SDGTIRAWDTRS-FHEVWSVTAG----SQEIFCFSFGGSTDYLLAAGC-------GSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 102 ~dg~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+..|.-|++.. ..+.+.+..| ...|..-..+++.+.++..|- .|.+.+|..+.+ .-+.++ +|...
T Consensus 125 -~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie-Ghaa~ 201 (365)
T 2xzh_A 125 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAAS 201 (365)
T ss_dssp -SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC-CSEEE
T ss_pred -CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceee-eeeee
Confidence 45799999974 4677777776 566777888888888877664 378889987643 334444 66554
Q ss_pred eeEEEEecC--CCCeEEEEeC---CCcEEEEecCCC-CCCC---cccee-eec---cCCceeeEEEecCCCcEEEEEecC
Q 016457 170 VTQVHFVPN--NQNKVVSASV---DGLICTFDTGGD-INDD---DLLES-VIN---VGTSVGKVGFFGETNKHLWCLTHI 236 (389)
Q Consensus 170 v~~~~~~~~--~~~~l~~~~~---d~~i~i~d~~~~-~~~~---~~~~~-~~~---~~~~i~~~~~~~~~~~~l~~~~~d 236 (389)
...+.+..+ ..++++.+.. .+.+++.++... .... +.... ... ..+-..++..+ +....++..+.-
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs-~kygviyviTK~ 280 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKY 280 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEE-TTTTEEEEEETT
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEec-ccCCEEEEEeCC
Confidence 433332211 1113333332 258999998533 1111 11111 111 23455678888 566689999999
Q ss_pred CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 237 ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 237 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
|.|++||++++.++..-.-. .+.|...+......+ + ++-...|.|.-..++....
T Consensus 281 G~ihlyDleTgt~i~~nrIS------------~d~iF~ta~~~~~~G-i-~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 281 GYIHLYDLETGTCIYMNRIS------------GETIFVTAPHEATAG-I-IGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp SEEEEEETTTCCEEEEEECC------------SSCEEEEEEEGGGTE-E-EEEETTCEEEEEEECTTTH
T ss_pred cEEEEEEcccCcEEEEeccC------------CCceEEecccCCCCc-E-EEEcCCCEEEEEEECcccE
Confidence 99999999999998776542 245544444444333 2 3444777777777766543
No 287
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.49 E-value=0.0014 Score=65.18 Aligned_cols=288 Identities=13% Similarity=0.063 Sum_probs=154.2
Q ss_pred CcceEEEeecCC------CCeEEEEec-CCeEEEEeCCCceeeeeecC-CCCcEEEEEEeCCCCCCEEEEEecCCeEEEE
Q 016457 38 DDYVFEIVPKND------WSLMAVSLS-TNVVKLYSPVTGQYSGECKG-HSSTVNQISFSGPSTPHVLHSCSSDGTIRAW 109 (389)
Q Consensus 38 ~~~v~~~~~~~~------~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iw 109 (389)
...|.|+++.|. .+++|+|.. |++|+|+++.+.+.+....- -.....++.+..-+...+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 678999999863 369999996 99999999987665533221 1123344443321211588899999987655
Q ss_pred Ecc--CCeEEE--EEEcCCCCeEEEEEeCCCC-eEEEeecCCeEEEEECcCCceeeeeeecccCCeeEE-EEecCC-CCe
Q 016457 110 DTR--SFHEVW--SVTAGSQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQV-HFVPNN-QNK 182 (389)
Q Consensus 110 d~~--~~~~~~--~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~-~~~ 182 (389)
.+. +++... +......++.-..+...+. .+++++ +....++--+ ++....- -....+.++ .|+... +.-
T Consensus 633 ~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s~--l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFSN--VNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEEE--BSSSCCCEEEEECCSSSTTE
T ss_pred EEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEec--cChHHhceEeccCcccCCCc
Confidence 543 454432 2222345565555543444 344444 4444444433 3322211 122234333 344322 224
Q ss_pred EEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC--------------------------
Q 016457 183 VVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-------------------------- 236 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------------------------- 236 (389)
++..+ ++.++|..+... .............+..++++|..+.+.+..+..
T Consensus 709 ~v~~~-~~~LrI~~i~~~---~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 709 LALAN-NSTLTIGTIDEI---QKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEEC-SSCEEEEEECCS---SSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred EEEEc-CCceEEEEeccc---CCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 55444 556999988632 222333344567888889885544333332210
Q ss_pred ----------------------CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec----
Q 016457 237 ----------------------ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT---- 290 (389)
Q Consensus 237 ----------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~---- 290 (389)
+.|++.|..+.+.+..+.-... ++...+..+.|..+.+. +++.|+
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n--------E~~~sv~~v~~~~~~~~-~lvVGTa~~~ 855 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN--------EYALSLVSCKLGKDPNT-YFIVGTAMVY 855 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT--------EEEEEEEEECCTTCCCC-EEEEEEEECC
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC--------cceEEEEEEEEccCCCE-EEEEEeeecC
Confidence 2355666655555544432110 01122333445444333 677665
Q ss_pred ------CCceEEEEEeccCCccccCCCeEEEe-cccceeeeeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCC
Q 016457 291 ------GAGTVGYFPVNYGGAATIGPPEAVLV-GGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 291 ------~dg~i~i~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
..|.|++|++..+++ ..+. ....++|++++ .| +|++|++.+ .+|++|++...
T Consensus 856 ~~e~~~~~Gri~vf~v~~~kL-------~lv~~~~v~g~v~al~--------~~--~g~Lla~ig--~~l~vy~l~~~ 914 (1158)
T 3ei3_A 856 PEEAEPKQGRIVVFQYSDGKL-------QTVAEKEVKGAVYSMV--------EF--NGKLLASIN--STVRLYEWTTE 914 (1158)
T ss_dssp TTCSSCCCEEEEEEEEETTEE-------EEEEEEEESSCEEEEE--------EE--TTEEEEEET--TEEEEEEECTT
T ss_pred CCCCCCCceEEEEEEEECCEE-------EEEEEEEcCCcCEEEe--------ee--CCEEEEEcC--CEEEEEECCCC
Confidence 358999999985443 2221 12346777774 23 344455554 78999999854
No 288
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.45 E-value=0.00055 Score=58.87 Aligned_cols=262 Identities=11% Similarity=0.098 Sum_probs=164.8
Q ss_pred CeEEEEecCceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEE
Q 016457 21 NSIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC 100 (389)
Q Consensus 21 ~~i~~w~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~ 100 (389)
.+|.+.|+.+.....+..-.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- .+.|.-=.|-.+. .|+-.
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~---~l~lV 122 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN---TVALV 122 (494)
T ss_dssp CEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT---EEEEE
T ss_pred CeEEEEECCCCCcceecccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC---eEEEE
Confidence 3677777654222221101111344688888888775 78999999999988888774 4567667787554 66666
Q ss_pred ecCCeEEEEEccC-CeEEEEEEcC----CCCeEEEEEeCCCCeEEEeec-------CCeEEEEECcCCceeeeeeecccC
Q 016457 101 SSDGTIRAWDTRS-FHEVWSVTAG----SQEIFCFSFGGSTDYLLAAGC-------GSQIQFWDWRNKKQVACLEESHVE 168 (389)
Q Consensus 101 ~~dg~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~ 168 (389)
+ +..|.-|++.. ..+.+.|..| ...|..-..+++.+.++..|- .|.+.+|..+.+ .-+.++ +|..
T Consensus 123 T-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ie-Ghaa 199 (494)
T 1bpo_A 123 T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAA 199 (494)
T ss_dssp C-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEEC-CSEE
T ss_pred c-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchhe-eeee
Confidence 5 45799999973 4677778776 567778888888888887664 378889987643 333444 6665
Q ss_pred CeeEEEEecC--CCCeEEEEeCC---CcEEEEecCCCC-CC---Cccceee-e---ccCCceeeEEEecCCCcEEEEEec
Q 016457 169 DVTQVHFVPN--NQNKVVSASVD---GLICTFDTGGDI-ND---DDLLESV-I---NVGTSVGKVGFFGETNKHLWCLTH 235 (389)
Q Consensus 169 ~v~~~~~~~~--~~~~l~~~~~d---~~i~i~d~~~~~-~~---~~~~~~~-~---~~~~~i~~~~~~~~~~~~l~~~~~ 235 (389)
....+.+..+ ...+++.+... +.++|.++.... .. .+....+ . ...+-..++..+ +....++..+.
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs-~kygviyviTK 278 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITK 278 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEE-TTTTEEEEEET
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEec-ccCCEEEEEec
Confidence 5444433221 11234444432 789999986431 11 0111111 1 123445678888 56668999999
Q ss_pred CCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 236 IETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 236 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
-|.|++||+.++.++..-.-. .+.|...+......+ +++....|.|.-..++....
T Consensus 279 ~G~i~lyDleTgt~i~~nrIs------------~~~iF~t~~~~~~~G--i~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMNRIS------------GETIFVTAPHEATAG--IIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp TSEEEEEETTTCCEEEEEECC------------SSCEEEEEEETTTTE--EEEEETTCEEEEEEECTTTH
T ss_pred CceEEEEecccceeeeeeccc------------CCceEEecccCCCCc--EEEEccCceEEEEEEccccc
Confidence 999999999999998776542 255555555544443 24444788887777776554
No 289
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.44 E-value=0.00022 Score=63.15 Aligned_cols=152 Identities=11% Similarity=0.046 Sum_probs=97.1
Q ss_pred cEEEEEEeC-CCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC-C----eEEEEECcC
Q 016457 82 TVNQISFSG-PSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG-S----QIQFWDWRN 155 (389)
Q Consensus 82 ~v~~i~~~~-~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~iwd~~~ 155 (389)
....|+++| ++ ..|+.+...+.|+.+|+..+.... +.........++++++++.|+++... + .+..++ ..
T Consensus 138 ~P~~lavdp~~~--g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNH--NHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RE 213 (430)
T ss_dssp CCCEEEEETTEE--EEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GG
T ss_pred CCCEEEECCCCC--CeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CC
Confidence 357889997 34 366666655889999988765543 33345678899999998877777652 2 344444 33
Q ss_pred Ccee--eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec--cCCceeeEEEecCCCc-EE
Q 016457 156 KKQV--ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN--VGTSVGKVGFFGETNK-HL 230 (389)
Q Consensus 156 ~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~-~l 230 (389)
+... ..+. .......++++|++..++++-..++.|..++..+.. ...+.. .......++++ ++++ ++
T Consensus 214 g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~-----~~~~~~~~~~~~P~gia~~-pdG~~ly 285 (430)
T 3tc9_A 214 SGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE-----TTPLFTIQDSGWEFHIQFH-PSGNYAY 285 (430)
T ss_dssp GTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE-----EEEEEECSSSSCCEEEEEC-TTSSEEE
T ss_pred Cceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc-----EEEEEEcCCCCcceeEEEc-CCCCEEE
Confidence 3322 2332 234467889999433477777678899999998432 111111 22356789999 6677 45
Q ss_pred EEEecCCcEEEEEcC
Q 016457 231 WCLTHIETLSIWDWK 245 (389)
Q Consensus 231 ~~~~~d~~i~i~d~~ 245 (389)
++-...+.|..++..
T Consensus 286 v~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 286 IVVVNQHYILRSDYD 300 (430)
T ss_dssp EEETTTTEEEEEEEE
T ss_pred EEECCCCEEEEEeCC
Confidence 555567789998765
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.43 E-value=0.00025 Score=62.75 Aligned_cols=213 Identities=7% Similarity=-0.036 Sum_probs=123.3
Q ss_pred CeEEEEec-Cceeeeeec-CcceEEEeecCCCCeEEEEecCC-----eEEEEeCCCcee-eeeecCCCCcEEEEEEeC-C
Q 016457 21 NSIKRFGL-KNSIQTNFG-DDYVFEIVPKNDWSLMAVSLSTN-----VVKLYSPVTGQY-SGECKGHSSTVNQISFSG-P 91 (389)
Q Consensus 21 ~~i~~w~~-~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~~-~~~~~~~~~~v~~i~~~~-~ 91 (389)
+.|+.++. ...+..+.. ......++++++|+ |+++...+ .+...+...+.. ...+. .-.....+++.| +
T Consensus 162 ~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~ 239 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQN 239 (433)
T ss_dssp SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTT
T ss_pred CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCC
Confidence 45555555 334444444 55688999999999 55554321 233333322111 01111 223456788888 5
Q ss_pred CCCCEEEEEecCCeEEEEEccCCeEEEEE-EcC-CCCeEEEEEeCCCCeEEEeec-CCeEEEEECc--CCce--eeeeee
Q 016457 92 STPHVLHSCSSDGTIRAWDTRSFHEVWSV-TAG-SQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWR--NKKQ--VACLEE 164 (389)
Q Consensus 92 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~--~~~~--~~~~~~ 164 (389)
+ .++++-..++.|+.++..++.....+ ... ...-..++|+|+++.|+++.. .+.|..++.. ++.. ...+.
T Consensus 240 G--~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~a- 316 (433)
T 4hw6_A 240 G--KIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVC- 316 (433)
T ss_dssp C--CEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEE-
T ss_pred C--eEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEE-
Confidence 5 45555556788999998877663333 222 223357999999987777665 6899998865 2221 11221
Q ss_pred cc---------------cCCeeEEEE---------ecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc-------
Q 016457 165 SH---------------VEDVTQVHF---------VPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV------- 213 (389)
Q Consensus 165 ~~---------------~~~v~~~~~---------~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~------- 213 (389)
+. -.....+++ .+++ +++++-...+.|+.++... .+..+.+.
T Consensus 317 g~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~~G------~v~t~~G~g~~~~~G 389 (433)
T 4hw6_A 317 GQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTPEG------RVTTYAGRGNSREWG 389 (433)
T ss_dssp ECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECTTS------EEEEEECCCTTCSSC
T ss_pred ecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECCCC------CEEEEEeCCCCCccc
Confidence 11 123567888 6666 3666666778899998642 12222211
Q ss_pred -----------CCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 214 -----------GTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 214 -----------~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
-.....|++.|+++.++++-..++.|+.++++
T Consensus 390 ~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 390 YVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 12356788886666666666666777777654
No 291
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.40 E-value=8.9e-06 Score=76.43 Aligned_cols=113 Identities=8% Similarity=0.048 Sum_probs=70.4
Q ss_pred EEEEeC-CCCCCEEEEEecCC-----------eEEEEEccCCeE--EEEEEcC-CCCeEEEEEeCCCCeEEEeec-CCeE
Q 016457 85 QISFSG-PSTPHVLHSCSSDG-----------TIRAWDTRSFHE--VWSVTAG-SQEIFCFSFGGSTDYLLAAGC-GSQI 148 (389)
Q Consensus 85 ~i~~~~-~~~~~~l~s~~~dg-----------~i~iwd~~~~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i 148 (389)
.+++.+ ++ ++++.|+.+. .+.+||+.+++. +..+... .....++++.+++..++++|. +..+
T Consensus 190 ~~av~~~~g--~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSG--RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTT--EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCC--EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 556676 66 6888877543 588999887653 2233322 223345666667777777775 5689
Q ss_pred EEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEe-CC-----CcEEEEecCCC
Q 016457 149 QFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS-VD-----GLICTFDTGGD 200 (389)
Q Consensus 149 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~ 200 (389)
.+||..+.+-...-.......-.+++..++++ +++.|+ .+ ..+.+||..+.
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCC
Confidence 99999876433221101122234556667885 888888 34 56899999854
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.36 E-value=5e-06 Score=78.32 Aligned_cols=225 Identities=8% Similarity=-0.060 Sum_probs=130.2
Q ss_pred CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEE-ecCCeEEEEEccC----CeEEEEEEcCCCCeEEEEEe
Q 016457 59 TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSC-SSDGTIRAWDTRS----FHEVWSVTAGSQEIFCFSFG 133 (389)
Q Consensus 59 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~-~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~ 133 (389)
.+.|+..++.+.+....+.. ...+..|+|.+.+ ..|+.+ ...+.|+.+++.. ......+.........|++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~--~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVAS--NRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTT--TEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEcccccc--CeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 45788888876655444433 3456789999866 355544 4567899998875 22222221112335568887
Q ss_pred CCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC-CcEEEEecCCCCCCCccceeee
Q 016457 134 GSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD-GLICTFDTGGDINDDDLLESVI 211 (389)
Q Consensus 134 ~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~ 211 (389)
+.++.|+.+.. .+.|.++++........+. ........|+++|.+..++++-... +.|..+++.... ...+.
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-----~~~l~ 535 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----IYSLV 535 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECC-CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-----CCEES
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEe-CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-----eeEEE
Confidence 66667666644 6899999987544333332 2234567899999765455544333 788888876321 11111
Q ss_pred -ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEec
Q 016457 212 -NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGT 290 (389)
Q Consensus 212 -~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~ 290 (389)
..-.....|++++.++.++++-+..+.|..+++... ....+.... . .......+++.. +. ++++-.
T Consensus 536 ~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~-~~~~~~~~~----~-----~~~~P~glavd~--~~-lywtd~ 602 (699)
T 1n7d_A 536 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDE----K-----RLAHPFSLAVFE--DK-VFWTDI 602 (699)
T ss_dssp CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS-CCEEECCCS----S-----SCSSCCCCEEET--TE-EEEECS
T ss_pred eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC-ceEEEEecC----C-----cCCCceEeEEEC--CE-EEEEeC
Confidence 122356789999656666677777789999998643 333332110 0 112233445543 34 345556
Q ss_pred CCceEEEEEeccCCc
Q 016457 291 GAGTVGYFPVNYGGA 305 (389)
Q Consensus 291 ~dg~i~i~~~~~~~~ 305 (389)
..+.|..++..+++.
T Consensus 603 ~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 603 INEAIFSANRLTGSD 617 (699)
T ss_dssp TTTCEEEEETTTEEE
T ss_pred CCCeEEEEEccCCCc
Confidence 678899998766554
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.33 E-value=0.002 Score=59.80 Aligned_cols=229 Identities=8% Similarity=-0.049 Sum_probs=142.9
Q ss_pred eEEEEecCCeEEEEeCCCceeeeeec-CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEE
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSGECK-GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCF 130 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 130 (389)
+|+.+ ....|+..++++.+....+. ..-..+..|+|.+.+. .++++-..++.|..+++........+.........+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~-~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDN-RIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCC-EEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 44444 46789999998654333222 1234678999998763 455555567889999887544433344333467789
Q ss_pred EEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEe--CCCcEEEEecCCCCCCCccc
Q 016457 131 SFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS--VDGLICTFDTGGDINDDDLL 207 (389)
Q Consensus 131 ~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~ 207 (389)
++.+.++.|+.+.. .+.|.+.++........+. ..-.....|+++|... .|+... ..+.|...++.... .
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-~~l~~P~~iavdp~~G-~lY~tD~g~~~~I~r~~~dG~~-----~ 158 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-KDLDSPRALALDPAEG-FMYWTEWGGKPKIDRAAMDGSE-----R 158 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-SSCCCEEEEEEETTTT-EEEEEECSSSCEEEEEETTSCS-----C
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-CCCCCcccEEEccCCC-eEEEeCCCCCCEEEEEeCCCCc-----e
Confidence 99877788777765 6889999986543222222 2345578999999664 444443 35678888887432 2
Q ss_pred eeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEE
Q 016457 208 ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVI 287 (389)
Q Consensus 208 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 287 (389)
..+...-.....+++.+.++.+.++-...+.|..+|+..... ..+.. .......+++.. .. +.+
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~------------~l~~P~glav~~--~~-ly~ 222 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD------------DLPHPFGLTQYQ--DY-IYW 222 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE------------CCSCEEEEEEET--TE-EEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec------------cCCCceEEEEEC--CE-EEE
Confidence 222233456789999955566666666678999999865433 33322 113344666654 33 345
Q ss_pred EecCCceEEEEEeccCCc
Q 016457 288 GGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 288 ~g~~dg~i~i~~~~~~~~ 305 (389)
+-...+.|...|..+++.
T Consensus 223 tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 223 TDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EETTTTEEEEEETTTCCS
T ss_pred ecCCCCEEEEEECCCCCc
Confidence 555678888888766643
No 294
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.29 E-value=0.00013 Score=61.46 Aligned_cols=193 Identities=11% Similarity=0.119 Sum_probs=114.4
Q ss_pred CCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecC----CCC--eEEEEe-C--CCcEEEEecCCCCCCCcc
Q 016457 136 TDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN----NQN--KVVSAS-V--DGLICTFDTGGDINDDDL 206 (389)
Q Consensus 136 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~l~~~~-~--d~~i~i~d~~~~~~~~~~ 206 (389)
...++.+...+-+.+||+ +++.++.+. . ..++.+..-|. ++. ++++.. . +++|.+|++.... ..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~-~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~---~~ 112 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN-T--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN---GT 112 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC-C--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT---CC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc-C--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC---Cc
Confidence 455666666889999999 899998886 2 56777777663 110 223333 3 5789999775221 11
Q ss_pred ceeee------ccC-CceeeEEE--ecCCCc-EEEEEecCCcEEEEEcC---C----CceeEEeecccccccCCccCCCC
Q 016457 207 LESVI------NVG-TSVGKVGF--FGETNK-HLWCLTHIETLSIWDWK---D----GQNVASFENARSLASDSWTLDDV 269 (389)
Q Consensus 207 ~~~~~------~~~-~~i~~~~~--~~~~~~-~l~~~~~d~~i~i~d~~---~----~~~~~~~~~~~~~~~~~~~~~~~ 269 (389)
+..+. ... ..+..+++ ++..+. ++++...+|.+..|++. . .+.+++|.. .
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-------------g 179 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-------------N 179 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-------------S
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-------------C
Confidence 22221 112 56677887 543453 68888899999999883 2 345556553 2
Q ss_pred CceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccc-eeeeeccCCCcccCCCC--CCCce-eE-
Q 016457 270 DYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHT-AVVRSVLPMPSVQGRPA--QSHGI-FG- 344 (389)
Q Consensus 270 ~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~--s~~~~-~l- 344 (389)
..+-.|...+... .|..+-++.-|..++.+...- ..++.+..+..+|- ..+..| ++ .++++ ||
T Consensus 180 sq~EgcvvDd~~g--~Lyv~eEd~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGL---------ai~~~~~g~gyLi 247 (355)
T 3amr_A 180 SQTEGMAADDEYG--RLYIAEEDEAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGL---------TIYYAADGKGYLM 247 (355)
T ss_dssp SCEEEEEEETTTT--EEEEEETTTEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEE---------EEEECGGGCEEEE
T ss_pred CCcceEEEcCCCC--eEEEecccceEEEEeCCcCCC-CCceEEEEecCCccccCcceE---------EEEecCCCCEEEE
Confidence 5677888988877 667787876565555442210 00111222211222 245555 33 45555 44
Q ss_pred EEecCCCeEEEEeccC
Q 016457 345 WTGGEDGRLCCWLSDD 360 (389)
Q Consensus 345 ~s~~~dg~v~iW~~~~ 360 (389)
+|+-.+.++.+|+.+.
T Consensus 248 vSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 248 ASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEGGGTEEEEEESST
T ss_pred EEcCCCCEEEEEECCC
Confidence 4444677999999973
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.27 E-value=0.0014 Score=55.66 Aligned_cols=275 Identities=13% Similarity=0.092 Sum_probs=141.5
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeee----cCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccC
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGEC----KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRS 113 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~ 113 (389)
...+.++.|.+.+..+++| ..|.| +...+.|+.-... ......+.+|.|.+ + ..++ ++.++.|.. ..+.
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~--~~~~-~g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N--EGWI-VGEPPIMLH-TTDG 107 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T--EEEE-EEETTEEEE-ESST
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C--eEEE-EECCCeEEE-ECCC
Confidence 5678999998877777754 56765 3333444322221 12345789999986 4 3444 456665443 2222
Q ss_pred CeEEEEEE---cCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCC
Q 016457 114 FHEVWSVT---AGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDG 190 (389)
Q Consensus 114 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 190 (389)
++.-..+. .....+..+.+.++ +.+++++.++.|..- ...++.-..+.......+..+.+.+++. +++.+. +|
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~G 183 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGN-GSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVSS-RG 183 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEET-TEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEET-TS
T ss_pred CCCceECccccCCCCCeEEEEEECC-CCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEEC-CC
Confidence 33212211 12345777887644 456666666654321 1223333333324456788999999874 665554 55
Q ss_pred cEEE-EecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCC
Q 016457 191 LICT-FDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDV 269 (389)
Q Consensus 191 ~i~i-~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (389)
.+.. .|-. +. ....+ .......+..+.+. +++. +++.+.+|.+.+.+...++.-..+.... + .+.
T Consensus 184 ~~~~S~d~g-G~-tW~~~--~~~~~~~~~~~~~~-~~g~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~-~-------~~~ 249 (327)
T 2xbg_A 184 SFYSTWEPG-QT-AWEPH--NRTTSRRLHNMGFT-PDGR-LWMIVNGGKIAFSDPDNSENWGELLSPL-R-------RNS 249 (327)
T ss_dssp SEEEEECTT-CS-SCEEE--ECCSSSCEEEEEEC-TTSC-EEEEETTTEEEEEETTEEEEECCCBCTT-S-------SCC
T ss_pred cEEEEeCCC-CC-ceeEC--CCCCCCccceeEEC-CCCC-EEEEeCCceEEEecCCCCCeeEeccCCc-c-------cCC
Confidence 5443 3421 11 11111 12334567888887 4555 4455667877665422232221111100 0 022
Q ss_pred CceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEec--ccceeeeeccCCCcccCCCCCCCceeEEEe
Q 016457 270 DYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVG--GHTAVVRSVLPMPSVQGRPAQSHGIFGWTG 347 (389)
Q Consensus 270 ~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~ 347 (389)
..+..+.+.+++. +++++ .+|.| ++..+.++. -..+.. .....+.++ .|.+++.+ +.+
T Consensus 250 ~~~~~v~~~~~~~--~~~~g-~~g~i-~~S~DgG~t------W~~~~~~~~~~~~~~~v---------~~~~~~~~-~~~ 309 (327)
T 2xbg_A 250 VGFLDLAYRTPNE--VWLAG-GAGAL-LCSQDGGQT------WQQDVDVKKVPSNFYKI---------LFFSPDQG-FIL 309 (327)
T ss_dssp SCEEEEEESSSSC--EEEEE-STTCE-EEESSTTSS------CEECGGGTTSSSCCCEE---------EEEETTEE-EEE
T ss_pred cceEEEEecCCCE--EEEEe-CCCeE-EEeCCCCcc------cEEcCccCCCCCCeEEE---------EEECCCce-EEE
Confidence 3577888888766 55555 46666 344444443 111110 112344555 66655654 555
Q ss_pred cCCCeEEEEe
Q 016457 348 GEDGRLCCWL 357 (389)
Q Consensus 348 ~~dg~v~iW~ 357 (389)
+.+|.|.-++
T Consensus 310 G~~G~i~~~~ 319 (327)
T 2xbg_A 310 GQKGILLRYV 319 (327)
T ss_dssp CSTTEEEEEC
T ss_pred cCCceEEEEc
Confidence 6689776554
No 296
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=0.00058 Score=65.14 Aligned_cols=171 Identities=15% Similarity=0.017 Sum_probs=97.4
Q ss_pred CeEEEEecCce-eeeeec-CcceEEEeecCCCCeEEEEecC-----CeEEEEeCCCceee--eeec-CCCCcEEEEEEeC
Q 016457 21 NSIKRFGLKNS-IQTNFG-DDYVFEIVPKNDWSLMAVSLST-----NVVKLYSPVTGQYS--GECK-GHSSTVNQISFSG 90 (389)
Q Consensus 21 ~~i~~w~~~~~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~--~~~~-~~~~~v~~i~~~~ 90 (389)
..|+++++... ...... ......++|+|||+.|+....+ ..|.++++.+++.. ..+. ........+.|+|
T Consensus 201 ~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp 280 (751)
T 2xe4_A 201 YTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA 280 (751)
T ss_dssp EEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT
T ss_pred EEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC
Confidence 35777776532 111111 2224568899999888877765 36888888776422 2222 2233466889999
Q ss_pred CCCCCEEEEEec---CCeEEEEEccCC--eE-EEEE-EcCCCCeEEEEEeCCCCeEEEeec-C----CeEEEEECcCCce
Q 016457 91 PSTPHVLHSCSS---DGTIRAWDTRSF--HE-VWSV-TAGSQEIFCFSFGGSTDYLLAAGC-G----SQIQFWDWRNKKQ 158 (389)
Q Consensus 91 ~~~~~~l~s~~~---dg~i~iwd~~~~--~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d----~~i~iwd~~~~~~ 158 (389)
++ ++|+.... ...|.++|+.++ +. +..+ ........++.|+ .++.|+..+. + ..|..+|+.+...
T Consensus 281 Dg--~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~~~ 357 (751)
T 2xe4_A 281 DT--NTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH-GTSHLVILTNEGGAVNHKLLIAPRGQPSD 357 (751)
T ss_dssp TS--SEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-TTTEEEEEECTTTCTTCEEEEEETTSTTC
T ss_pred CC--CEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-eCCEEEEEeCCCCCCCcEEEEEcCCCccc
Confidence 99 56665542 346888888765 22 1222 2234556667766 4666665544 3 3677778765322
Q ss_pred eee-eeecccC--CeeEEEEecCCCCeEEEEeCCCc--EEEEec
Q 016457 159 VAC-LEESHVE--DVTQVHFVPNNQNKVVSASVDGL--ICTFDT 197 (389)
Q Consensus 159 ~~~-~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~--i~i~d~ 197 (389)
... +. .+.. .+..+.+. +..++++...++. |.++|+
T Consensus 358 ~~~~li-~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 358 WSHVLV-DHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp CCCEEE-CCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred ceeeEE-CCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 223 22 2333 34455554 4346677777775 555665
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.20 E-value=0.004 Score=57.86 Aligned_cols=227 Identities=8% Similarity=-0.032 Sum_probs=144.7
Q ss_pred cCCCCeEEEEecCce--eeee--ecCcceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCC
Q 016457 17 CDNVNSIKRFGLKNS--IQTN--FGDDYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGP 91 (389)
Q Consensus 17 ~~~~~~i~~w~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~ 91 (389)
.+..+.|+..++... ...+ .+-..+..++|++.+..|+.+ ..++.|..++++.......+.........|++.+.
T Consensus 11 ~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~ 90 (628)
T 4a0p_A 11 FSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL 90 (628)
T ss_dssp EEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred EEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeC
Confidence 346678888887632 1111 123467899999976666555 45789999998754333333322245678888766
Q ss_pred CCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeec--CCeEEEEECcCCceeeeeeecccCC
Q 016457 92 STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC--GSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 92 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+. +++++-...+.|.+.++........+...-.....+++.|..+.|+.+.. .+.|...++.... ...+. ..-..
T Consensus 91 ~~-~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~-~~~~~ 167 (628)
T 4a0p_A 91 GK-NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLV-PNVGR 167 (628)
T ss_dssp TT-EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEE-CSCSS
T ss_pred CC-EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEE-CCCCC
Confidence 52 45566666788999998654332223233456789999998888888763 5688888876433 33333 24456
Q ss_pred eeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce
Q 016457 170 VTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN 249 (389)
Q Consensus 170 v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 249 (389)
...|++++++..++++-...+.|..+|+.+... ..+...-.....+++. . +.++++-...+.|...|..+++.
T Consensus 168 P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-----~v~~~~l~~P~glav~-~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 168 ANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-----EVIADDLPHPFGLTQY-Q-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEEECCSCEEEEEEE-T-TEEEEEETTTTEEEEEETTTCCS
T ss_pred cceEEEccccCEEEEEECCCCEEEEEcCCCCce-----EEeeccCCCceEEEEE-C-CEEEEecCCCCEEEEEECCCCCc
Confidence 789999998754555556678899999985321 1222223345678886 3 45556665678999999877765
Q ss_pred eEEe
Q 016457 250 VASF 253 (389)
Q Consensus 250 ~~~~ 253 (389)
...+
T Consensus 241 ~~~l 244 (628)
T 4a0p_A 241 RTII 244 (628)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
No 298
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.08 E-value=0.0085 Score=57.31 Aligned_cols=232 Identities=13% Similarity=0.109 Sum_probs=136.0
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeee-cCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGEC-KGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
...|.++.-..+| +|..|+.+| +..||-.+-+..... ......|.++....++ .|..|+.+| +..||..+.+.
T Consensus 21 ~n~V~~I~qD~~G-~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g---~lWigT~~G-l~~yd~~~~~f 94 (758)
T 3ott_A 21 ASVVSCFLQDSEG-LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT---YLYMGTDNG-ILVYNYRADRY 94 (758)
T ss_dssp CCCEEEEEECTTS-CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT---EEEEEETTE-EEEEETTTTEE
T ss_pred cceEEEEEECCCC-CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC---cEEEEeCCC-eEEEeCCCCEE
Confidence 5679999988887 677788777 667774322211111 1123568888877666 778887766 78899887644
Q ss_pred EEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee----ecccCCeeEEEEecCCCCeEEEEeCCCcE
Q 016457 117 VWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE----ESHVEDVTQVHFVPNNQNKVVSASVDGLI 192 (389)
Q Consensus 117 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 192 (389)
..........|.++... ++.+.+++.+ -|..+|..+++.. .+. ......|.++....++. |..|+.+ -+
T Consensus 95 ~~~~~~~~~~i~~i~~~--~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl 167 (758)
T 3ott_A 95 EQPETDFPTDVRTMALQ--GDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYN-GL 167 (758)
T ss_dssp CCCSCCCCSCEEEEEEE--TTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC--EEEEETT-EE
T ss_pred ECcccCCCceEEEEEec--CCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC--EEEEeCC-CH
Confidence 32111113457777653 4577777665 6888998765432 221 01234588888887774 4445554 47
Q ss_pred EEEecCCCCCCCccceeeec------cCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccC
Q 016457 193 CTFDTGGDINDDDLLESVIN------VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTL 266 (389)
Q Consensus 193 ~i~d~~~~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 266 (389)
..||..++. ...... ....|.++... .++..|..++. +-+..+|..+++... +...
T Consensus 168 ~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~i~~d-~~~~~lWigt~-~Gl~~~~~~~~~~~~-~~~l---------- 229 (758)
T 3ott_A 168 CRYIPSNGK-----FEGIPLPVHSSQSNLFVNSLLED-TTRQCVWIGTE-GYLFQYFPSTGQIKQ-TEAF---------- 229 (758)
T ss_dssp EEEETTTTE-----EEEECCCCCTTCSSCCEEEEEEE-TTTTEEEEEEE-EEEEEEETTTTEEEE-EEEE----------
T ss_pred hhCccCCCc-----eEEecCCCccccccceeEEEEEE-CCCCEEEEEEC-CCCeEEcCCCCeEEe-ccCC----------
Confidence 788876431 111110 12246777766 44555666664 458889987664322 2211
Q ss_pred CCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 267 DDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 267 ~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
....|.++....+|. ++ .|+.+| +.+++..+++.
T Consensus 230 -~~~~i~~i~~d~~g~-lW--igT~~G-l~~~~~~~~~~ 263 (758)
T 3ott_A 230 -HNNSIKSLALDGNGD-LL--AGTDNG-LYVYHNDTTPL 263 (758)
T ss_dssp -EEEEEEEEEECTTCC-EE--EEETTE-EEEECCTTSCC
T ss_pred -CCCeEEEEEEcCCCC-EE--EEeCCc-eeEEecCCCcE
Confidence 114577887777765 33 344444 78888776543
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.94 E-value=0.013 Score=54.41 Aligned_cols=288 Identities=7% Similarity=-0.043 Sum_probs=151.3
Q ss_pred CcceEEEeecCCCCeEEEEec-CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeE
Q 016457 38 DDYVFEIVPKNDWSLMAVSLS-TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHE 116 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 116 (389)
-...+.+++++++..|+.+.. .+.|...+++.........+.......|++..+ .++++-...+.|...|..+++.
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~---~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED---ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS---EEEEECTTTCSEEEEESSSCCC
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC---EEEEecCCCCEEEEEECCCCcc
Confidence 345678999997777766644 578999988754332222212222346666543 2555555667788888766643
Q ss_pred EEEEEcCCC-------------------------CeEEEEEe-----------CC--------------CCeEEEeecCC
Q 016457 117 VWSVTAGSQ-------------------------EIFCFSFG-----------GS--------------TDYLLAAGCGS 146 (389)
Q Consensus 117 ~~~~~~~~~-------------------------~v~~~~~~-----------~~--------------~~~l~~~~~d~ 146 (389)
...+..... ....+++. |. ...++..+..+
T Consensus 247 ~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~ 326 (619)
T 3s94_A 247 LREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRT 326 (619)
T ss_dssp CEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESS
T ss_pred cEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEccc
Confidence 322211000 01111111 11 11122223335
Q ss_pred eEEEEECcCCceee-eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeec-cCCceeeEEEec
Q 016457 147 QIQFWDWRNKKQVA-CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVIN-VGTSVGKVGFFG 224 (389)
Q Consensus 147 ~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 224 (389)
.|+..++....... .+....-..+..|+|++.+..++++-...+.|+.+++.+.. ...+.. .-.....+++..
T Consensus 327 ~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~-----~~~v~~~~~~~p~GlAvD~ 401 (619)
T 3s94_A 327 DLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSG-----SQFVVTAQIAHPDGIAVDW 401 (619)
T ss_dssp CEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----CEEEECSSCSCCCEEEEET
T ss_pred ceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCc-----cEEEEECCCCCcCceEEec
Confidence 56666665443211 11101234577899998664355555567889999987431 122222 224567889885
Q ss_pred CCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 225 ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 225 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
..++++++-+..+.|.+.++.... ...+... .-....++++.|....+|+.-.+..+.|...+++...
T Consensus 402 ~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~-----------~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~ 469 (619)
T 3s94_A 402 VARNLYWTDTGTDRIEVTRLNGTM-RKILISE-----------DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD 469 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCS-CEEEECT-----------TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred ccCcEEEEeCCCCcEEEEeCCCCe-EEEEEEC-----------CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCc
Confidence 566677777777899999987443 3333221 2255788999997664443322334667766665432
Q ss_pred ccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEe-cCCCeEEEEeccCC
Q 016457 305 AATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTG-GEDGRLCCWLSDDS 361 (389)
Q Consensus 305 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~-~~dg~v~iW~~~~~ 361 (389)
. ..+....-.....+ ++++++..|+.+ +..+.|...+++..
T Consensus 470 ~-------~~l~~~~l~~P~Gl---------alD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 470 R-------VVLVNTSLGWPNGL---------ALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp C-------EEEECSSCSCEEEE---------EEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred c-------EEEEeCCCCCCeee---------EEcccCCEEEEEECCCCEEEEEecCCC
Confidence 2 22321222333445 677654444433 44566777776544
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.93 E-value=0.013 Score=54.24 Aligned_cols=158 Identities=6% Similarity=-0.160 Sum_probs=96.3
Q ss_pred cceEEEeecCCCCeEEEE-ecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEec--CCeEEEEEccCCe
Q 016457 39 DYVFEIVPKNDWSLMAVS-LSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSS--DGTIRAWDTRSFH 115 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~ 115 (389)
.....+++.+.+..|+.+ ...+.|.+.+++.......+...-.....|++.|.+ ..|+.... .+.|...++....
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~--g~ly~tD~g~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS--GFMYWTDWGEVPKIERAGMDGSS 161 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTT--TEEEEEECSSSCEEEEEETTSCS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCC--CeEEEeccCCCCEEEEEECCCCc
Confidence 567889999866555555 457899999987433222222344557789999875 35554443 3566666665332
Q ss_pred EEEEEEcCCCCeEEEEEeCCCCeEEEeec-CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEE
Q 016457 116 EVWSVTAGSQEIFCFSFGGSTDYLLAAGC-GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICT 194 (389)
Q Consensus 116 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 194 (389)
........-.....+++++.++.|+.+.. .+.|..+|+..... ..+..+.......|++..+ +++++-...+.|..
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~ 238 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFED--ILYWTDWSTHSILA 238 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE-C---------CCCEEESSS--EEEEECTTTCSEEE
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc-EEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEE
Confidence 22223233456789999988888888765 67899999864332 2222112222346676654 36666666788999
Q ss_pred EecCCCC
Q 016457 195 FDTGGDI 201 (389)
Q Consensus 195 ~d~~~~~ 201 (389)
.|..++.
T Consensus 239 ~d~~tg~ 245 (619)
T 3s94_A 239 CNKYTGE 245 (619)
T ss_dssp EESSSCC
T ss_pred EECCCCc
Confidence 8887653
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.89 E-value=0.0091 Score=51.17 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=121.7
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCcee--eeeec---CCCCcEEEEEEeCC---CCCCEEEEEecC-----C
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQY--SGECK---GHSSTVNQISFSGP---STPHVLHSCSSD-----G 104 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~---~~~~~v~~i~~~~~---~~~~~l~s~~~d-----g 104 (389)
-.....++|.|+|++ +++...|.|.+++ +++. +..+. ........|+|+|+ +. .++++-... +
T Consensus 30 l~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g-~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEP-YVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSC-EEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCC-EEEEEEecCCCCCcc
Confidence 345679999999984 4556679999998 3432 22111 12356889999998 31 344443332 5
Q ss_pred eEEEEEccCCe-----EE-EEEE---cCCCCeEEEEEeCCCCeEEEeec-------------CCeEEEEECcCC------
Q 016457 105 TIRAWDTRSFH-----EV-WSVT---AGSQEIFCFSFGGSTDYLLAAGC-------------GSQIQFWDWRNK------ 156 (389)
Q Consensus 105 ~i~iwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~------ 156 (389)
.|..++...+. .+ ..+. ........++|.|++..+++.+. .|.|.-+|....
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 67788876431 11 1233 11223468999998865555442 146666665421
Q ss_pred ------ceeeeeeecccCCeeEEEEec-CCCCeEEEEeCCCc--------EEEEecCCCCCC--------------Cccc
Q 016457 157 ------KQVACLEESHVEDVTQVHFVP-NNQNKVVSASVDGL--------ICTFDTGGDIND--------------DDLL 207 (389)
Q Consensus 157 ------~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~--------i~i~d~~~~~~~--------------~~~~ 207 (389)
.....+..++ .....++|+| ++. ++++-..... |.+... +... ..+.
T Consensus 186 f~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~--G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 186 FLGRRGARPEVYSLGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVP--GGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TTTCTTSCTTEEEECC-SEECCCEECTTTCC-EEEEEECC------CCCEEEEECT--TCBCCTTTCCSCCCCTTSCCCS
T ss_pred ccCCCCCCccEEEEcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEecc--CCcCCCCcccCCCCCCCCcCCe
Confidence 1111222123 2356789999 553 5554433332 333322 2100 0111
Q ss_pred eeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCce------eEEeecccccccCCccCCCCCceeeecccCCC
Q 016457 208 ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQN------VASFENARSLASDSWTLDDVDYFVDCHYPGEG 281 (389)
Q Consensus 208 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 281 (389)
..+ ........++|. ++.++++....+.|...++..... ...+.. ....+..+++.|+|
T Consensus 262 ~~~-~~~~ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~------------~~~rp~~v~~~pdG 326 (352)
T 2ism_A 262 YFW-PQGFPPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS------------GFGRLREVQVGPDG 326 (352)
T ss_dssp EEC-TTCCCEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE------------SSCCEEEEEECTTS
T ss_pred Eec-CCCCCCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecc------------cCCCeeEEEECCCC
Confidence 122 223345677774 455666655666777777654321 111111 12567889999988
Q ss_pred CeEEEEEecCCc
Q 016457 282 ENLWVIGGTGAG 293 (389)
Q Consensus 282 ~~~~l~~g~~dg 293 (389)
. +|+++...+|
T Consensus 327 ~-lyv~~~~~~g 337 (352)
T 2ism_A 327 A-LYVTTSNRDG 337 (352)
T ss_dssp C-EEEEECSTTT
T ss_pred c-EEEEEeCCCC
Confidence 5 4555544443
No 302
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.84 E-value=0.0033 Score=52.54 Aligned_cols=188 Identities=9% Similarity=0.024 Sum_probs=92.8
Q ss_pred CCCeEEEEe-cC-----CeEEEEeCCCceee--eeecCCCCcEEEEEEeCCCCCCEEEEEecC-----CeEEEEEccCCe
Q 016457 49 DWSLMAVSL-ST-----NVVKLYSPVTGQYS--GECKGHSSTVNQISFSGPSTPHVLHSCSSD-----GTIRAWDTRSFH 115 (389)
Q Consensus 49 ~~~~l~~~~-~d-----~~i~iw~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~ 115 (389)
++.+++.|+ .+ ..+.+||+.+++-. ..+...... .+++.. ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY-VASVSL-HD--RIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TT--EEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc-ccEEEE-CC--EEEEEcCCCCCccCceEEEEECCCCC
Confidence 344556665 32 36888998776422 222211111 222222 44 577777755 358899988765
Q ss_pred ---EEE--EEEcCCCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 116 ---EVW--SVTAGSQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 116 ---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
-.. .+.........+.+ ++..++.+|.+ ..+.+||+.+.+-...-.......-.+++.. ++. +++.
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~ 165 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGV-IYCL 165 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTE-EEEE
T ss_pred CCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCE-EEEE
Confidence 222 12211222222333 45555555542 4688999887643221110111111222222 443 7777
Q ss_pred EeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCce
Q 016457 186 ASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQN 249 (389)
Q Consensus 186 ~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 249 (389)
|+.+ ..+.+||+.+.. ...+... .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-
T Consensus 166 GG~~~~~~~~~~~~~d~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPHTGH--WTNVTPM-ATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp CCBCSSCBCCCEEEEETTTTE--EEEECCC-SSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCCCcccceEEEEeCCCCc--EEeCCCC-CcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 7654 458899987542 1111111 111111223332 45677777664 4688999987643
No 303
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.81 E-value=0.016 Score=51.57 Aligned_cols=262 Identities=9% Similarity=0.014 Sum_probs=142.0
Q ss_pred EEEEEEeCC-CCCCEEEEEecCCeEEEEEccCCeEEEEEEcC---CCCeEEEEE-------eCCCCeEEEeecCC-----
Q 016457 83 VNQISFSGP-STPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG---SQEIFCFSF-------GGSTDYLLAAGCGS----- 146 (389)
Q Consensus 83 v~~i~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~----- 146 (389)
...|+|.|. .. +++++-...+.|++.|+.++.....+... ......++| ++++..|+++...+
T Consensus 141 p~~la~dp~~~~-~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKD-HLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEE-EEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCC-EEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 568999984 31 34444444467888998876665544332 235889999 98888788877643
Q ss_pred --eEEEEECcC-Ccee-----eeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC-------CCCCC-C---c--
Q 016457 147 --QIQFWDWRN-KKQV-----ACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG-------GDIND-D---D-- 205 (389)
Q Consensus 147 --~i~iwd~~~-~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~~-~---~-- 205 (389)
.|.+++... +... ..+. .......++++|++..++++-..++.|..+|+. ++... . .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 366776433 2221 2232 123456788999665577777788899999997 44310 0 0
Q ss_pred -cceeee--ccCCceeeEEEecCCCcE-EEEEecCCcEEEEEcC--CCce--eEEeeccccccc---CCccCCCCCcee-
Q 016457 206 -LLESVI--NVGTSVGKVGFFGETNKH-LWCLTHIETLSIWDWK--DGQN--VASFENARSLAS---DSWTLDDVDYFV- 273 (389)
Q Consensus 206 -~~~~~~--~~~~~i~~~~~~~~~~~~-l~~~~~d~~i~i~d~~--~~~~--~~~~~~~~~~~~---~~~~~~~~~~i~- 273 (389)
....+. ........++|+ ++++. +++-+....|+.++.. .+.. ...+.+...... ..-....-....
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~-p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIH-PTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEEC-TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred cccceeEecCCCCCceEEEEc-CCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 011211 223456789999 67775 4444566788886653 3321 123322100000 000000001122
Q ss_pred eeccc-------CCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccc-----------eeeee-c-----cCC
Q 016457 274 DCHYP-------GEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHT-----------AVVRS-V-----LPM 329 (389)
Q Consensus 274 ~~~~~-------~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~-----------~~v~~-~-----~~~ 329 (389)
.++.. +++. +.++-..+..|+.++ .++.. ..+. |.. +.... . +..
T Consensus 377 gv~vd~~~~~~~~~g~--lyVaD~~N~rIr~i~-~~G~v-------~Tia-G~g~~~~~~~~~~~G~~dG~~~~~a~f~~ 445 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYD--FYFVDRLNFCVRKVT-PEGIV-------STYA-GRGASTSLADGNQWGTDDGDLREVARFRD 445 (496)
T ss_dssp EEEEECTTCCSSCCEE--EEEEEGGGTEEEEEC-TTCBE-------EEEE-ESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred EEEEccccccccCCCe--EEEEECCCCEEEEEe-CCCCE-------EEEe-cccccccccCccccccCCCCchhhhhcCC
Confidence 23332 3333 445555677788887 33432 3333 210 00001 0 111
Q ss_pred CcccCCCCCCC-ceeEEEecCCCeEEEEeccCC
Q 016457 330 PSVQGRPAQSH-GIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 330 ~~~~~~~~s~~-~~~l~s~~~dg~v~iW~~~~~ 361 (389)
+.- ++++++ |.++++=.....||.++++..
T Consensus 446 P~g--Iavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 446 VSG--LVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEE--EEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CcE--EEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 112 278886 887777778889999999866
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.79 E-value=0.0076 Score=50.31 Aligned_cols=155 Identities=15% Similarity=0.191 Sum_probs=102.5
Q ss_pred cEEEEEEeCCCCCCEEEEEe-cCCeEEEEEccCCeEEEE-EEc----C--CCCeEEEEE---eCCCCeEEEeec------
Q 016457 82 TVNQISFSGPSTPHVLHSCS-SDGTIRAWDTRSFHEVWS-VTA----G--SQEIFCFSF---GGSTDYLLAAGC------ 144 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~~------ 144 (389)
--.+++|.+.. ..|+.++ ..++|..|+...+..... +.. . ...+..+.| .|. +.|+++..
T Consensus 14 yPE~~~wd~~~--g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~~~af~ 90 (334)
T 2p9w_A 14 TPEDTIYDRTR--QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKNAKSFN 90 (334)
T ss_dssp CCSCEEEETTT--TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEETTTTC
T ss_pred CCcCccCcCCC--CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEccccccc
Confidence 34578898755 3555555 789999999975544333 211 1 113679999 577 55555333
Q ss_pred --------CCeEEEEECc---CCceeeeeee-c-----------ccCCeeEEEEecCCCCeEEEEeCC-CcEEEEecCCC
Q 016457 145 --------GSQIQFWDWR---NKKQVACLEE-S-----------HVEDVTQVHFVPNNQNKVVSASVD-GLICTFDTGGD 200 (389)
Q Consensus 145 --------d~~i~iwd~~---~~~~~~~~~~-~-----------~~~~v~~~~~~~~~~~~l~~~~~d-~~i~i~d~~~~ 200 (389)
+..|..||+. +++.+..... . .......|+..++| +..++++.. +.|..++....
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEeCCCC
Confidence 5779999999 7777655431 0 11247899999999 588988888 88888877732
Q ss_pred CCCCccceeee------ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 201 INDDDLLESVI------NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 201 ~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
. +..+. ......+.|++. +++..|++....+.|..+|+..
T Consensus 170 ~-----~~~~~~~~~~~~~~~G~nGIv~~-pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 T-----VSTFAWESGNGGQRPGYSGITFD-PHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-----EEEEEECCCCSSSCCSCSEEEEE-TTTTEEEEESSSSSEEEEECSS
T ss_pred E-----EeeeeecCCCcccccCcceEEEe-CCCCEEEEEcCCCeEEEEcCCC
Confidence 1 11111 111236789999 6777777776699999999884
No 305
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.79 E-value=0.038 Score=55.08 Aligned_cols=219 Identities=9% Similarity=0.031 Sum_probs=130.1
Q ss_pred cCCCCeEEEEecCc----eeeeeecCcceEEEeecCCCCeEEEEecC---------------------------------
Q 016457 17 CDNVNSIKRFGLKN----SIQTNFGDDYVFEIVPKNDWSLMAVSLST--------------------------------- 59 (389)
Q Consensus 17 ~~~~~~i~~w~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------------------------- 59 (389)
+..++.+++..+.+ .++++.-...+..++++|+.+.++++..+
T Consensus 711 ~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1158)
T 3ei3_A 711 LANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFS 790 (1158)
T ss_dssp EECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC-
T ss_pred EEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccccc
Confidence 44556688877642 22223226778888888877766554421
Q ss_pred ----------------CeEEEEeCCCceeeeeecC-CCCcEEEEEE---eCCCCCCEEEEEe----------cCCeEEEE
Q 016457 60 ----------------NVVKLYSPVTGQYSGECKG-HSSTVNQISF---SGPSTPHVLHSCS----------SDGTIRAW 109 (389)
Q Consensus 60 ----------------~~i~iw~~~~~~~~~~~~~-~~~~v~~i~~---~~~~~~~~l~s~~----------~dg~i~iw 109 (389)
+.|++.|..+.+.+..+.- ..+.+.+++. ..+.. .+|+.|. ..|.|.+|
T Consensus 791 ~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~-~~lvVGTa~~~~~e~~~~~Gri~vf 869 (1158)
T 3ei3_A 791 SSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPN-TYFIVGTAMVYPEEAEPKQGRIVVF 869 (1158)
T ss_dssp ---------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCC-CEEEEEEEECCTTCSSCCCEEEEEE
T ss_pred ccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCC-EEEEEEeeecCCCCCCCCceEEEEE
Confidence 2366777666665544431 2344555553 32222 5888876 35789999
Q ss_pred EccCCeEEEEEEc-CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC
Q 016457 110 DTRSFHEVWSVTA-GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV 188 (389)
Q Consensus 110 d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 188 (389)
++..++.....+. .+++|++++-- ++ +++++- ...|++|++...+.+. ....+-..+..+.....+ ++++.|..
T Consensus 870 ~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~-~~I~vgD~ 944 (1158)
T 3ei3_A 870 QYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKG-DFILVGDL 944 (1158)
T ss_dssp EEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEET-TEEEEEES
T ss_pred EEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEE-EEeeccccEEEEEEeccC-CEEEEEEh
Confidence 9975443222221 26889998854 34 555554 4899999998665444 221122223333333345 48999988
Q ss_pred CCcEEEEecCCCCCCCccceee--eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 189 DGLICTFDTGGDINDDDLLESV--INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 189 d~~i~i~d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
-..|.++..+.. ...+..+ ......++++.+. .+ ..++.+..+|.|.++....
T Consensus 945 ~~Sv~~~~y~~~---~~~L~~~a~D~~~~~vta~~~l-d~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 945 MRSVLLLAYKPM---EGNFEEIARDFNPNWMSAVEIL-DD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp SBCEEEEEEETT---TTEEEEEEECCSCBCEEEEEEE-ET-TEEEEEETTSEEEEEEECT
T ss_pred hheEEEEEEEcC---CCeEEEEEeecccccEEEEEEE-cc-CcEEEEcCCCcEEEEecCC
Confidence 888887765522 1122222 2245678888887 33 4788889999999887653
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.75 E-value=0.015 Score=49.31 Aligned_cols=235 Identities=10% Similarity=-0.005 Sum_probs=120.8
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeec---CCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECK---GHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH 115 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 115 (389)
..+.++.|.+ +..++ ++..+.|.. ..+.|+.-.... .+...+..+.+.+++ ..++. +.+|.|.. ..+.++
T Consensus 80 ~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~--~~~~~-~~~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNG--SAEMI-TNVGAIYR-TKDSGK 152 (327)
T ss_dssp CEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETT--EEEEE-ETTCCEEE-ESSTTS
T ss_pred ccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCC--CEEEE-eCCccEEE-EcCCCC
Confidence 4688999986 44444 455675544 333344322222 233557888887666 45554 45664422 122232
Q ss_pred EEEEE-EcCCCCeEEEEEeCCCCeEEEeecCCeEEE-EECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEE
Q 016457 116 EVWSV-TAGSQEIFCFSFGGSTDYLLAAGCGSQIQF-WDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLIC 193 (389)
Q Consensus 116 ~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i-wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 193 (389)
.-..+ ......+..+++.|++. +++.+.+|.+.. .|- .+..-..+.......+..+.+.+++. + +.++.+|.++
T Consensus 153 tW~~~~~~~~~~~~~~~~~~~~~-~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~-~-~~~~~~G~~~ 228 (327)
T 2xbg_A 153 NWQALVQEAIGVMRNLNRSPSGE-YVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGR-L-WMIVNGGKIA 228 (327)
T ss_dssp SEEEEECSCCCCEEEEEECTTSC-EEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSC-E-EEEETTTEEE
T ss_pred CCEEeecCCCcceEEEEEcCCCc-EEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCC-E-EEEeCCceEE
Confidence 22222 23356788999997655 445555555544 342 12222222223456788999999874 4 4555678887
Q ss_pred EEecCCCCCCCccceee-eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCce
Q 016457 194 TFDTGGDINDDDLLESV-INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 194 i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (389)
+.+...+. ....+..- ......+..+.+. +++.+++ ++.++.| ++....++.-..+.... .....+
T Consensus 229 ~s~~D~G~-tW~~~~~~~~~~~~~~~~v~~~-~~~~~~~-~g~~g~i-~~S~DgG~tW~~~~~~~---------~~~~~~ 295 (327)
T 2xbg_A 229 FSDPDNSE-NWGELLSPLRRNSVGFLDLAYR-TPNEVWL-AGGAGAL-LCSQDGGQTWQQDVDVK---------KVPSNF 295 (327)
T ss_dssp EEETTEEE-EECCCBCTTSSCCSCEEEEEES-SSSCEEE-EESTTCE-EEESSTTSSCEECGGGT---------TSSSCC
T ss_pred EecCCCCC-eeEeccCCcccCCcceEEEEec-CCCEEEE-EeCCCeE-EEeCCCCcccEEcCccC---------CCCCCe
Confidence 76422111 00111100 0122357788887 4555444 4456766 34444454333332110 012456
Q ss_pred eeecccCCCCeEEEEEecCCceEEEEEe
Q 016457 273 VDCHYPGEGENLWVIGGTGAGTVGYFPV 300 (389)
Q Consensus 273 ~~~~~~~~~~~~~l~~g~~dg~i~i~~~ 300 (389)
.++.|.+++. +++++.+|.|.-++-
T Consensus 296 ~~v~~~~~~~---~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 296 YKILFFSPDQ---GFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEEEETTE---EEEECSTTEEEEECC
T ss_pred EEEEEECCCc---eEEEcCCceEEEEcC
Confidence 7787865443 345557887766653
No 307
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.72 E-value=0.015 Score=48.55 Aligned_cols=155 Identities=13% Similarity=0.187 Sum_probs=106.5
Q ss_pred ceEEEeecCCCCeEEEEe-cCCeEEEEeCCCceeee-eecC----C--CCcEEEEEE---eCCCCCCEEEEEec------
Q 016457 40 YVFEIVPKNDWSLMAVSL-STNVVKLYSPVTGQYSG-ECKG----H--SSTVNQISF---SGPSTPHVLHSCSS------ 102 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~-~~~~----~--~~~v~~i~~---~~~~~~~~l~s~~~------ 102 (389)
.--+++|++....|..++ ..++|..|+...+.... .+.+ . ...+..|.| .|++ .++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g--rL~vv~~~~~af~~ 91 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK--RLFAVMKNAKSFNF 91 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC--EEEEEEEETTTTCT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC--cEEEEEcccccccc
Confidence 344788988666666666 68999999987553322 2322 1 124689999 5776 56665432
Q ss_pred -------CCeEEEEEcc---CCeEEEEEEcC-------------CCCeEEEEEeCCCCeEEEeecC-CeEEEEECcCCce
Q 016457 103 -------DGTIRAWDTR---SFHEVWSVTAG-------------SQEIFCFSFGGSTDYLLAAGCG-SQIQFWDWRNKKQ 158 (389)
Q Consensus 103 -------dg~i~iwd~~---~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~d-~~i~iwd~~~~~~ 158 (389)
+..|..+|+. +++.+...... ......++..++++..++.+.. +.|...+.... .
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-T 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-C
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-E
Confidence 6779999999 78877666531 1258899999888888888877 88888876533 3
Q ss_pred eeeee--e---cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 159 VACLE--E---SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 159 ~~~~~--~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
+..+. . ......+.|+++|++. .|++....|.+..+|++
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEECS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcCC
Confidence 32221 0 1122367999999995 77777669999999998
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.69 E-value=0.012 Score=49.20 Aligned_cols=185 Identities=10% Similarity=0.092 Sum_probs=89.6
Q ss_pred CeEEEEecC----CeEEEEeCCCceeee--eecCCCCcEEEEEEeCCCCCCEEEEEecCC-----eEEEEEccCCeEEEE
Q 016457 51 SLMAVSLST----NVVKLYSPVTGQYSG--ECKGHSSTVNQISFSGPSTPHVLHSCSSDG-----TIRAWDTRSFHEVWS 119 (389)
Q Consensus 51 ~~l~~~~~d----~~i~iw~~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~ 119 (389)
.+++.|+.+ ..+..||+.+.+-.. .+...... .+++.. ++ .+++.|+.++ .+.+||+.+.+-...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVYM-AG--LVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TT--EEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEEE-CC--EEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 344555432 357888887654221 12211111 122233 44 5777777543 588899887654322
Q ss_pred E--EcCCCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCC---
Q 016457 120 V--TAGSQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVD--- 189 (389)
Q Consensus 120 ~--~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 189 (389)
- .........+.+ ++..++.+|.+ ..+.+||+.+.+-...-.......-.+++.. ++ .+++.|+.+
T Consensus 93 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~ 168 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GG-LLYAVGGYDVAS 168 (302)
T ss_dssp CCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEECCEETTT
T ss_pred CCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CC-EEEEEeCCCCCC
Confidence 1 111122222333 45556666654 3578889876643221110111111223332 34 366666543
Q ss_pred ----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 190 ----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 190 ----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
..+.+||+.+.. ...+... .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 169 ~~~~~~~~~yd~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 169 RQCLSTVECYNATTNE--WTYIAEM-STRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TEECCCEEEEETTTTE--EEEECCC-SSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CccccEEEEEeCCCCc--EEECCCC-ccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 358889988542 1111111 111111233333 45677777664 368899988764
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.67 E-value=0.021 Score=48.89 Aligned_cols=149 Identities=11% Similarity=0.096 Sum_probs=83.8
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEE--EEEE---cCCCCeEEEEEeCC---CCeEEEeecC------C
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEV--WSVT---AGSQEIFCFSFGGS---TDYLLAAGCG------S 146 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~---~~~~~v~~~~~~~~---~~~l~~~~~d------~ 146 (389)
..-..++|.|++ . |+.+..+|.|.+++ +++.. ..+. ........|+++|+ ++.++++... +
T Consensus 31 ~~P~~ia~~pdG--~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDG--G-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTS--C-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCC--e-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 346789999998 4 55556779999998 44422 2111 12457889999987 6777776552 6
Q ss_pred eEEEEECcCCc-----eee-eee--ecccCCeeEEEEecCCCCeEEEEeC-------------CCcEEEEecCCCCCCCc
Q 016457 147 QIQFWDWRNKK-----QVA-CLE--ESHVEDVTQVHFVPNNQNKVVSASV-------------DGLICTFDTGGDINDDD 205 (389)
Q Consensus 147 ~i~iwd~~~~~-----~~~-~~~--~~~~~~v~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~ 205 (389)
.|..++..... .+. .+. .........|+|.|+|. ++++.+. .|.|.-++.........
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 78888876431 111 122 01112346899999994 6666432 25666666653111100
Q ss_pred --------cceeeeccCCceeeEEEecCCCcEEEEEec
Q 016457 206 --------LLESVINVGTSVGKVGFFGETNKHLWCLTH 235 (389)
Q Consensus 206 --------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 235 (389)
....+..--.....++|.|.++.++++-..
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 111111112346788898546665554433
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.67 E-value=0.021 Score=48.87 Aligned_cols=243 Identities=10% Similarity=0.010 Sum_probs=125.1
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeee---ee----cCCCCcEEEEEEeCC---CCCCEEEEEec------
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSG---EC----KGHSSTVNQISFSGP---STPHVLHSCSS------ 102 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~---~~----~~~~~~v~~i~~~~~---~~~~~l~s~~~------ 102 (389)
.....|+|.|+|+.|+++...|.|++++.. ++... .+ .........|+++|+ +. .+.++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR-RIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC-EEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCC-EEEEEEeCCCCCCC
Confidence 456799999999835556668999999854 43221 11 112345789999995 31 34444322
Q ss_pred -CCeEEEEEccCC----eEEEE-EEcC------CCCeEEEEEeCCCCeEEEeec-------------CCeEEEEECcCCc
Q 016457 103 -DGTIRAWDTRSF----HEVWS-VTAG------SQEIFCFSFGGSTDYLLAAGC-------------GSQIQFWDWRNKK 157 (389)
Q Consensus 103 -dg~i~iwd~~~~----~~~~~-~~~~------~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~ 157 (389)
...|..|++... ..... +..- ......++|.|++..+++.+. .|.|.-+|....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 234666665432 11111 2211 123467999988854444433 1467666654320
Q ss_pred ------------eeeeeeecccCCeeEEEEecCCCCeEEEEeCC--CcEEEEecCCCCCC--------------------
Q 016457 158 ------------QVACLEESHVEDVTQVHFVPNNQNKVVSASVD--GLICTFDTGGDIND-------------------- 203 (389)
Q Consensus 158 ------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~-------------------- 203 (389)
....+..++ .....++|+|... .|.++... +.=.|.-+..+...
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g-~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSN-ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTT-EEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCC-CEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 112222133 3367899999432 44444322 11122222211100
Q ss_pred -------CccceeeeccCCceeeEEEec------CCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCC
Q 016457 204 -------DDLLESVINVGTSVGKVGFFG------ETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVD 270 (389)
Q Consensus 204 -------~~~~~~~~~~~~~i~~~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (389)
..+... ..+...+..++|.. .++.++++.-..+.|...++..++......... ....
T Consensus 254 ~~~~~~~~~P~~~-~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~---------~~~~ 323 (353)
T 2g8s_A 254 GEIVAGTEQPVFY-WKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT---------DRGQ 323 (353)
T ss_dssp BSSCTTSCCCSEE-ESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG---------GGCC
T ss_pred CCCCCCccCCeEE-eCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc---------CCCC
Confidence 001111 12233566777763 136677766677788888877654332211100 0124
Q ss_pred ceeeecccCCCCeEEEEEecCCceEE
Q 016457 271 YFVDCHYPGEGENLWVIGGTGAGTVG 296 (389)
Q Consensus 271 ~i~~~~~~~~~~~~~l~~g~~dg~i~ 296 (389)
.+..+++.|+|. +|+++-..+|.|+
T Consensus 324 rp~~v~~~pdG~-lyv~td~~~g~I~ 348 (353)
T 2g8s_A 324 RIRDVRTGPDGY-LYVLTDESSGELL 348 (353)
T ss_dssp CEEEEEECTTSC-EEEEECSTTEEEE
T ss_pred ceeEEEECCCCc-EEEEEeCCCCEEE
Confidence 688999999987 4444444456443
No 311
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.62 E-value=0.0095 Score=59.29 Aligned_cols=261 Identities=10% Similarity=0.088 Sum_probs=151.6
Q ss_pred eEEEEecCceeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEe
Q 016457 22 SIKRFGLKNSIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCS 101 (389)
Q Consensus 22 ~i~~w~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~ 101 (389)
+|.+.|+.++....+.+-.--+.-.+|..+.||.=. ..++.|+|+++.+.++.+.- ...|.-=.|-.+. .|+-.+
T Consensus 49 ~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~---~l~lVT 123 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN---TVALVT 123 (1630)
T ss_pred eEEEEECCCCCCcccccccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC---eeEEEc
Confidence 566666654322222111111334688887777765 78999999998887777763 4567666776554 565554
Q ss_pred cCCeEEEEEccC-CeEEEEEEcC----CCCeEEEEEeCCCCeEEEeec-------CCeEEEEECcCCceeeeeeecccCC
Q 016457 102 SDGTIRAWDTRS-FHEVWSVTAG----SQEIFCFSFGGSTDYLLAAGC-------GSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 102 ~dg~i~iwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
+..|.-|++.. ..+.+.|..| ...|..-..+++.+.++..|- .|.+.+|..+.+ .-+.+. +|...
T Consensus 124 -~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~ie-gha~~ 200 (1630)
T 1xi4_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-GHAAS 200 (1630)
T ss_pred -CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhh-HhHhh
Confidence 44699999963 3454455544 466777778888888877664 478889987643 223333 55544
Q ss_pred eeEEEEe--cCCCCeEEEEeC---CCcEEEEecCCC-CCC---Ccccee-eec---cCCceeeEEEecCCCcEEEEEecC
Q 016457 170 VTQVHFV--PNNQNKVVSASV---DGLICTFDTGGD-IND---DDLLES-VIN---VGTSVGKVGFFGETNKHLWCLTHI 236 (389)
Q Consensus 170 v~~~~~~--~~~~~~l~~~~~---d~~i~i~d~~~~-~~~---~~~~~~-~~~---~~~~i~~~~~~~~~~~~l~~~~~d 236 (389)
...+... +....+++.+.. .+.++|.++... ... .+.... ... ...-..++..+ +....++..+.-
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs-~k~g~iy~itk~ 279 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQIS-EKHDVVFLITKY 279 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEec-cccCEEEEEecC
Confidence 4333332 111123332222 268999998643 100 011111 111 13344567777 555678888999
Q ss_pred CcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 237 ETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 237 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
|.|++||+.++.++..-.- ...+|...+......+ + ++....|.|.-..+.....
T Consensus 280 G~~~~~d~~t~~~i~~~ri------------s~~~iF~~~~~~~~~g-~-~~vnr~G~vl~v~v~~~~i 334 (1630)
T 1xi4_A 280 GYIHLYDLETGTCIYMNRI------------SGETIFVTAPHEATAG-I-IGVNRKGQVLSVCVEEENI 334 (1630)
T ss_pred ceEEEEecccchhhhhccc------------cCCceEEeccCCCCCc-e-EEEcCCceEEEEEEccchh
Confidence 9999999999988765432 1144444444433332 2 3444677777666665443
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.61 E-value=0.016 Score=48.47 Aligned_cols=185 Identities=9% Similarity=-0.020 Sum_probs=92.1
Q ss_pred CeEEEEec--CCeEEEEeCCCceee--eeecCCCCcEEEEEEeCCCCCCEEEEEecC----CeEEEEEccCCeEEEEEEc
Q 016457 51 SLMAVSLS--TNVVKLYSPVTGQYS--GECKGHSSTVNQISFSGPSTPHVLHSCSSD----GTIRAWDTRSFHEVWSVTA 122 (389)
Q Consensus 51 ~~l~~~~~--d~~i~iw~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~ 122 (389)
.+++.|+. ...+.+||..+++-. ..+......- +++.. ++ .+++.|+.+ ..+.+||+.+.+-...-..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~--~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDA-ACVFW-DN--VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSC-EEEEE-TT--EEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCccccee-EEEEE-CC--EEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 35556654 357889998876422 2222211122 22222 44 577777755 5688899887754332221
Q ss_pred C--CCCeEEEEEeCCCCeEEEeecC------CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeC------
Q 016457 123 G--SQEIFCFSFGGSTDYLLAAGCG------SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASV------ 188 (389)
Q Consensus 123 ~--~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------ 188 (389)
. ......+.+ ++..++.+|.+ ..+.+||+.+.+-...-.......-.+++.. ++. +++.|+.
T Consensus 89 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 89 PTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGL-IYVCGGSLGNNVS 164 (306)
T ss_dssp SSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCEESCTTT
T ss_pred CccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCE-EEEECCCCCCCCc
Confidence 1 222222333 45555666654 4689999887643221110111111222222 443 6666654
Q ss_pred ---CCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 189 ---DGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 189 ---d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
-..+.+||+.+.. ...+... .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 165 ~~~~~~~~~yd~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 165 GRVLNSCEVYDPATET--WTELCPM-IEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEECCCEEEEETTTTE--EEEECCC-SSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred ccccceEEEeCCCCCe--EEECCCc-cchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 3458899988542 1111111 111111223333 45667776654 468889987764
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.51 E-value=0.026 Score=47.02 Aligned_cols=187 Identities=7% Similarity=-0.039 Sum_probs=94.1
Q ss_pred CCCeEEEEecC-----CeEEEEeCCCce-----eeeeecCCCCcEEEEEEeCCCCCCEEEEEecC-----CeEEEEEccC
Q 016457 49 DWSLMAVSLST-----NVVKLYSPVTGQ-----YSGECKGHSSTVNQISFSGPSTPHVLHSCSSD-----GTIRAWDTRS 113 (389)
Q Consensus 49 ~~~~l~~~~~d-----~~i~iw~~~~~~-----~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-----g~i~iwd~~~ 113 (389)
++.+++.|+.+ ..+.+||+.+++ .+..+...... .+++.. ++ .+++.|+.+ ..+.+||+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGL-AGATTL-GD--MIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBS-CEEEEE-TT--EEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccc-eeEEEE-CC--EEEEEcccCCCcccceEEEEcCCC
Confidence 56677777754 468999987755 22222211111 222222 44 577777654 3588899887
Q ss_pred CeEEEEEEcC--CCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEE
Q 016457 114 FHEVWSVTAG--SQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSA 186 (389)
Q Consensus 114 ~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 186 (389)
.+-...-... ...-.++.+ ++..++.+|.+ ..+.+||+.+.+-...-.......-.+++.. ++ .+++.|
T Consensus 138 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~G 213 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-ND-HIYVVG 213 (301)
T ss_dssp TEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEEC
T ss_pred CeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CC-EEEEEe
Confidence 6544322221 122222222 45555555543 5689999887643221110111111222222 34 377777
Q ss_pred eCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 187 SVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 187 ~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
+.+ ..+.+||+.+.. ...+... .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 214 G~~~~~~~~~v~~yd~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 214 GFDGTAHLSSVEAYNIRTDS--WTTVTSM-TTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CBCSSSBCCCEEEEETTTTE--EEEECCC-SSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCc--EEECCCC-CCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 764 468999998542 1111111 111111223332 45677777655 357788877653
No 314
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.45 E-value=0.031 Score=47.55 Aligned_cols=197 Identities=11% Similarity=0.022 Sum_probs=109.6
Q ss_pred ceEEEeecCCCCeEEEE------------ecCCeEEEEeCCC--ceee-eeecC-----CCCcEEEEEEeCC--CCCCEE
Q 016457 40 YVFEIVPKNDWSLMAVS------------LSTNVVKLYSPVT--GQYS-GECKG-----HSSTVNQISFSGP--STPHVL 97 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~------------~~d~~i~iw~~~~--~~~~-~~~~~-----~~~~v~~i~~~~~--~~~~~l 97 (389)
..-.++..|+|..++++ ..+|.|.++|.++ ++.. ..+.+ ..-....|.+.++ +. .+|
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~-~~L 129 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNT-VYL 129 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCC-EEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCc-EEE
Confidence 44567778887544443 1689999999873 2211 12222 2235677777663 32 234
Q ss_pred EEE-ec--CCeEEEEEccCC----eEEEEEEcC-CCCeEEEEEeCCCCeEEEeec-----------------CCeEEEEE
Q 016457 98 HSC-SS--DGTIRAWDTRSF----HEVWSVTAG-SQEIFCFSFGGSTDYLLAAGC-----------------GSQIQFWD 152 (389)
Q Consensus 98 ~s~-~~--dg~i~iwd~~~~----~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd 152 (389)
+.+ .. +.+|.+|++... ..+..+.+. -...+.+.+.+++...++... .|.|.-+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 444 33 467888887643 223344432 345789999977655444321 24555555
Q ss_pred CcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecC-CCcEEE
Q 016457 153 WRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGE-TNKHLW 231 (389)
Q Consensus 153 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~ 231 (389)
. ++ +..+. ..-...+.|+|+|+++.++++-+..+.|..|++.... .......+ ........+++. . +|.+.+
T Consensus 210 ~--~~-~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g-~l~~~~~~-~~~g~PDGi~vD-~e~G~lwv 282 (355)
T 3sre_A 210 P--ND-VRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW-TLTPLRVL-SFDTLVDNISVD-PVTGDLWV 282 (355)
T ss_dssp T--TC-CEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-CEEEEEEE-ECSSEEEEEEEC-TTTCCEEE
T ss_pred C--Ce-EEEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCC-cEecCEEE-eCCCCCceEEEe-CCCCcEEE
Confidence 4 32 22232 2334578999999997455555668899999997321 11111122 335566778887 5 466655
Q ss_pred EEecC-CcEEEEEc
Q 016457 232 CLTHI-ETLSIWDW 244 (389)
Q Consensus 232 ~~~~d-~~i~i~d~ 244 (389)
++..+ +.|..|+.
T Consensus 283 a~~~~g~~v~~~~P 296 (355)
T 3sre_A 283 GCHPNGMRIFFYDA 296 (355)
T ss_dssp EEESCHHHHHSCCT
T ss_pred EecCCceEEEEECC
Confidence 55433 24444443
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.39 E-value=0.043 Score=45.83 Aligned_cols=187 Identities=8% Similarity=-0.019 Sum_probs=94.6
Q ss_pred CCCeEEEEecC----CeEEEEeCCCceee--eeecCCCCcEEEEEEeCCCCCCEEEEEecC------CeEEEEEccCCeE
Q 016457 49 DWSLMAVSLST----NVVKLYSPVTGQYS--GECKGHSSTVNQISFSGPSTPHVLHSCSSD------GTIRAWDTRSFHE 116 (389)
Q Consensus 49 ~~~~l~~~~~d----~~i~iw~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~ 116 (389)
++.+++.|+.+ ..+.+||+.+++-. ..+......- +++.. ++ .+++.|+.+ ..+.+||+.+.+-
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAA-EG--KIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEE-TT--EEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEE-CC--EEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 56677777754 67889998876432 2222111111 22222 44 577777765 4588999887754
Q ss_pred EEE--EEcCCCCeEEEEEeCCCCeEEEeec---------CCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 117 VWS--VTAGSQEIFCFSFGGSTDYLLAAGC---------GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 117 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
... +......-..+.+ ++..++.+|. -..+.+||+.+.+-...-.......-.+++.. ++ .+++.
T Consensus 131 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~ 206 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KD-KIFAV 206 (306)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TT-EEEEE
T ss_pred EeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CC-EEEEE
Confidence 332 1111122222222 4555555553 24588999887643221110111112223333 44 37777
Q ss_pred EeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 186 ASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 186 ~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
|+.+ ..+.+||+.+.. ...+..+. ....-..++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 207 GG~~~~~~~~~~~~yd~~~~~--W~~~~~~p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 207 GGQNGLGGLDNVEYYDIKLNE--WKMVSPMP-WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CCEETTEEBCCEEEEETTTTE--EEECCCCS-CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eCCCCCCCCceEEEeeCCCCc--EEECCCCC-CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 7653 458899988542 11111111 11111223332 45677777754 467888887653
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.32 E-value=0.064 Score=45.90 Aligned_cols=234 Identities=11% Similarity=0.037 Sum_probs=123.0
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCce-eeeeec---CCCCcEEEEEEeCC---CCCCEEEEEec---C----
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQ-YSGECK---GHSSTVNQISFSGP---STPHVLHSCSS---D---- 103 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~---~~~~~v~~i~~~~~---~~~~~l~s~~~---d---- 103 (389)
-.....|+|.|+|+ |+++..+|.|++++ .+++ .+..+. ........|+++|+ +. .++++-.. +
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKS-WVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSC-EEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCC-EEEEEEeccCCCCCcc
Confidence 35577999999997 55556679999997 4454 222211 12356889999997 31 34444332 3
Q ss_pred CeEEEEEccCC-------eEE-EEEEcC-CCCeEEEEEeCCCCeEEEeec-------------CCeEEEEECcCCc----
Q 016457 104 GTIRAWDTRSF-------HEV-WSVTAG-SQEIFCFSFGGSTDYLLAAGC-------------GSQIQFWDWRNKK---- 157 (389)
Q Consensus 104 g~i~iwd~~~~-------~~~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~---- 157 (389)
..|..|+.... +.+ ..+... ......++|.|++..+++.+. .|.|.-++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777776543 111 123321 223567999998876665443 1456656543210
Q ss_pred ---eeeeeeecccCCeeEEEEec-CCCCeEEEEeCCC---cEEEEecCCC--------CC----CCccceeeeccCCcee
Q 016457 158 ---QVACLEESHVEDVTQVHFVP-NNQNKVVSASVDG---LICTFDTGGD--------IN----DDDLLESVINVGTSVG 218 (389)
Q Consensus 158 ---~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~---~i~i~d~~~~--------~~----~~~~~~~~~~~~~~i~ 218 (389)
....+..++. ....++|+| ++. ++++-.... .|.+...-.. .. ...++..+........
T Consensus 185 pf~~~~i~a~G~r-np~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIWSYGHR-NPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSTTCCEEEECCS-CCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCcEEEEccC-CcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 0112221333 356899999 553 554433222 2444322110 00 0011112111234567
Q ss_pred eEEEec------CCCcEEEEEecCCcEEEEEcCCC-cee--EEeecccccccCCccCCCCCceeeecccCCCCeEEEEE
Q 016457 219 KVGFFG------ETNKHLWCLTHIETLSIWDWKDG-QNV--ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIG 288 (389)
Q Consensus 219 ~~~~~~------~~~~~l~~~~~d~~i~i~d~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 288 (389)
.++|.. .++.++++....+.|...++... +.. ..+... ....+..+++.|||. +|+++
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~-----------~~~rp~~v~~~pDG~-lyv~~ 329 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN-----------VFGRLRDVVIDDDGG-ILIST 329 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT-----------TSCCEEEEEECTTSC-EEEEE
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC-----------CCCCeeEEEECCCCc-EEEEE
Confidence 777741 35666666666678888887753 221 122110 125678899999885 44444
No 317
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.29 E-value=0.042 Score=47.43 Aligned_cols=157 Identities=15% Similarity=0.201 Sum_probs=98.3
Q ss_pred CCCeEEEeecCCeEEEEECcCCceeeeeeecc---cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCC-CC-----c
Q 016457 135 STDYLLAAGCGSQIQFWDWRNKKQVACLEESH---VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN-DD-----D 205 (389)
Q Consensus 135 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~-----~ 205 (389)
++..++++- ++.||.-++......+.+...+ -..+..+..+|+|. +|+..+ +..|.|..+..+.. .. .
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCccccccc
Confidence 444444443 3788887776444444444221 22688899999995 777775 56899988873221 11 0
Q ss_pred --cceeeec------cCCceeeEEEecCC--CcEEEEEecCCcEEEEEcCCCc-eeEEeecccccccCCcc-CCCCCcee
Q 016457 206 --LLESVIN------VGTSVGKVGFFGET--NKHLWCLTHIETLSIWDWKDGQ-NVASFENARSLASDSWT-LDDVDYFV 273 (389)
Q Consensus 206 --~~~~~~~------~~~~i~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~i~ 273 (389)
..+.+.- ...+|..+.|+|-. +..|++-..|+.|++||+.... ....+..... .+. -.....+.
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~----~fg~d~~~~ev~ 183 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN----SFGLDARVNDIT 183 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS----EEESCSSCCCEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc----ccCCCcccceEE
Confidence 1111111 24679999999633 4589999999999999998521 1113321100 000 01336788
Q ss_pred eecccCCCCeEEEEEecCCceEEEE
Q 016457 274 DCHYPGEGENLWVIGGTGAGTVGYF 298 (389)
Q Consensus 274 ~~~~~~~~~~~~l~~g~~dg~i~i~ 298 (389)
+++|..++=.+|+++.+.+|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999998878888888888988765
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.24 E-value=0.066 Score=44.55 Aligned_cols=185 Identities=11% Similarity=0.053 Sum_probs=92.7
Q ss_pred CCCeEEEEecC-----CeEEEEeCCCcee--eeeecCCCCcEEEEEEeCCCCCCEEEEEecCC-----eEEEEEccCCeE
Q 016457 49 DWSLMAVSLST-----NVVKLYSPVTGQY--SGECKGHSSTVNQISFSGPSTPHVLHSCSSDG-----TIRAWDTRSFHE 116 (389)
Q Consensus 49 ~~~~l~~~~~d-----~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~ 116 (389)
++.+++.|+.+ ..+.+||..+.+- +..+...... .+++.. ++ .+++.|+.++ .+.+||+.+.+-
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVL-NG--LLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TT--EEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEE-CC--EEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 56677777754 3588899876642 2222211111 222222 44 5777777653 477888877654
Q ss_pred EEE--EEcCCCCeEEEEEeCCCCeEEEeecC-------CeEEEEECcCCceee--eeeecccCCeeEEEEecCCCCeEEE
Q 016457 117 VWS--VTAGSQEIFCFSFGGSTDYLLAAGCG-------SQIQFWDWRNKKQVA--CLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 117 ~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
... +........++.+ ++..++.+|.+ ..+.+||+.+.+-.. .+. ....-.+++.. ++ .+++.
T Consensus 137 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~-~~-~iyv~ 210 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS--TRRSGAGVGVL-NN-LLYAV 210 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS--SCCBSCEEEEE-TT-EEEEE
T ss_pred eecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc--cccccccEEEE-CC-EEEEE
Confidence 332 1111122222222 45555555542 458899988764322 222 11111223333 34 37777
Q ss_pred EeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCC-----cEEEEEcCCCc
Q 016457 186 ASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE-----TLSIWDWKDGQ 248 (389)
Q Consensus 186 ~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~ 248 (389)
|+.+ ..+.+||+.+.. ...+.... ....-..++. .++.+++.|+.++ .+.+||+.+.+
T Consensus 211 GG~~~~~~~~~~~~yd~~~~~--W~~~~~~~-~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 211 GGHDGPLVRKSVEVYDPTTNA--WRQVADMN-MCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCBSSSSBCCCEEEEETTTTE--EEEECCCS-SCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCC--EeeCCCCC-CccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 7654 368899988542 11111111 1111122333 2456777777553 47888887653
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.24 E-value=0.047 Score=45.64 Aligned_cols=187 Identities=9% Similarity=-0.011 Sum_probs=93.0
Q ss_pred cCCCCeEEEEec----CCeEEEEeCCCceeee--eecCCCCcEEEEEEeCCCCCCEEEEEec----C-----CeEEEEEc
Q 016457 47 KNDWSLMAVSLS----TNVVKLYSPVTGQYSG--ECKGHSSTVNQISFSGPSTPHVLHSCSS----D-----GTIRAWDT 111 (389)
Q Consensus 47 ~~~~~~l~~~~~----d~~i~iw~~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~~l~s~~~----d-----g~i~iwd~ 111 (389)
.-++.+++.|+. -..+.+||..+++-.. .+...... .+++.. ++ .+++.|+. + ..+.+||+
T Consensus 22 ~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~lyv~GG~~~~~~~~~~~~~~~~~d~ 97 (308)
T 1zgk_A 22 KVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCVV-GG--LLYAVGGRNNSPDGNTDSSALDCYNP 97 (308)
T ss_dssp CCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TT--EEEEECCEEEETTEEEECCCEEEEET
T ss_pred CCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEEE-CC--EEEEECCCcCCCCCCeecceEEEECC
Confidence 335566666763 2468899987764222 22211111 122333 44 57777765 2 35788898
Q ss_pred cCCeEEEE--EEcCCCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCceee--eeeecccCCeeEEEEecCCCCe
Q 016457 112 RSFHEVWS--VTAGSQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQVA--CLEESHVEDVTQVHFVPNNQNK 182 (389)
Q Consensus 112 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~ 182 (389)
.+.+-... +.........+.+ ++..++.+|.+ ..+.+||+.+.+-.. .+. ....-.+++.. ++ .+
T Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~-~~-~i 171 (308)
T 1zgk_A 98 MTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML--TRRIGVGVAVL-NR-LL 171 (308)
T ss_dssp TTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS--SCCBSCEEEEE-TT-EE
T ss_pred CCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC--ccccceEEEEE-CC-EE
Confidence 87653322 1111122222333 45555555542 468899988764322 222 11111222222 44 37
Q ss_pred EEEEeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 183 VVSASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 183 l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
++.|+.+ ..+.+||+.+.. ...+... .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 172 yv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 172 YAVGGFDGTNRLNSAECYYPERNE--WRMITAM-NTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp EEECCBCSSCBCCCEEEEETTTTE--EEECCCC-SSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEeCCCCCCcCceEEEEeCCCCe--EeeCCCC-CCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 7777654 458899987542 1111111 111111223333 45677777664 468899988764
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.22 E-value=0.073 Score=44.64 Aligned_cols=181 Identities=10% Similarity=0.027 Sum_probs=89.1
Q ss_pred eEEEEecCCeEEEEeCCCceeee-eecCC-CCcEEEEEEeCCCCCCEEEEEec----C-------CeEEEEEccCCeEEE
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSG-ECKGH-SSTVNQISFSGPSTPHVLHSCSS----D-------GTIRAWDTRSFHEVW 118 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~-~~~~~-~~~v~~i~~~~~~~~~~l~s~~~----d-------g~i~iwd~~~~~~~~ 118 (389)
+++.|+ ..+.+||+.+++-.. .+... ...-.+++. .++ .+++.|+. + ..+..||+.+.+-..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVT-KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEEC-TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEE-ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 445555 579999998876322 22111 111222333 345 57777774 1 126778887765422
Q ss_pred EEEcC--CCCeEEEEEeCCCCeEEEeecC--------CeEEEEECcCCcee--eeeeecccCCeeEEEEecCCCCeEEEE
Q 016457 119 SVTAG--SQEIFCFSFGGSTDYLLAAGCG--------SQIQFWDWRNKKQV--ACLEESHVEDVTQVHFVPNNQNKVVSA 186 (389)
Q Consensus 119 ~~~~~--~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~ 186 (389)
.-... .... +++.. ++..++.+|.+ ..+.+||+.+.+-. ..+. ....-.+++. -++ .+++.|
T Consensus 82 ~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~-~iyv~G 155 (315)
T 4asc_A 82 MPPLPSPRCLF-GLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP--YVVYGHTVLS-HMD-LVYVIG 155 (315)
T ss_dssp CCCBSSCEESC-EEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEE-ETT-EEEEEC
T ss_pred CCCCCcchhce-eEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC--CcccceeEEE-ECC-EEEEEe
Confidence 11111 1111 22222 44555555532 46899998876422 2222 1111122333 234 377777
Q ss_pred eC-C-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCC-----cEEEEEcCCCc
Q 016457 187 SV-D-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIE-----TLSIWDWKDGQ 248 (389)
Q Consensus 187 ~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~ 248 (389)
+. + ..+.+||..+.. ...+... .....-.+++.. ++.+++.|+.++ .+.+||+.+.+
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~--W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFE--WKELAPM-QTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTE--EEECCCC-SSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCCCcccceEEEEeCCCCe--EEECCCC-CCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 75 2 468899988542 1111111 111111223332 456777777654 58889987764
No 321
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.011 Score=49.98 Aligned_cols=194 Identities=6% Similarity=-0.066 Sum_probs=109.5
Q ss_pred CeEEEEecCCeEEEEeCCCceeeeeecCC-CCcEEEEEEe--CCCCCCEEEEE--ecCCeEEEEEccCCeEEEEEEcC--
Q 016457 51 SLMAVSLSTNVVKLYSPVTGQYSGECKGH-SSTVNQISFS--GPSTPHVLHSC--SSDGTIRAWDTRSFHEVWSVTAG-- 123 (389)
Q Consensus 51 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~i~~~--~~~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~-- 123 (389)
.++++++.||.|.-+|.++|+.+..+... ..++....-. +.+ ..++.+ +.||.|..++..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~--~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLET--YETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTS--SEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccC--CcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 47888999999999999999999888653 1222221100 011 134433 58999999999888666555532
Q ss_pred --CCCeEE---EEE-e----CCCCeEEEeecCCeEEEEECcCCceeeeeeecccCC------eeEEEEe-----cCCCCe
Q 016457 124 --SQEIFC---FSF-G----GSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVED------VTQVHFV-----PNNQNK 182 (389)
Q Consensus 124 --~~~v~~---~~~-~----~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------v~~~~~~-----~~~~~~ 182 (389)
..++.. ... . ..++.+++++.+|.+...|+++|+.+.++..+.... ..|.... ..+ ..
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~-~~ 167 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE-NM 167 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C-CE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC-Ce
Confidence 222221 000 0 046788899999999999999999999887221111 1122211 112 36
Q ss_pred EEEEeCCCcEEEEecCCCCCCCcc-ceeeeccCC--cee-eEEEecCCCcEEEEEecCCcEEEEEcCCCceeE
Q 016457 183 VVSASVDGLICTFDTGGDINDDDL-LESVINVGT--SVG-KVGFFGETNKHLWCLTHIETLSIWDWKDGQNVA 251 (389)
Q Consensus 183 l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~--~i~-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 251 (389)
++.+..+..+.+.+ +++. .... ......... .+. .-... .++.+ +.++.||.|.-+|..+++.+-
T Consensus 168 v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s-~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFS-KDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSC-SSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccc-cCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777777777766 3332 1100 111111000 000 00001 23444 557889999999998887653
No 322
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.20 E-value=0.088 Score=45.04 Aligned_cols=147 Identities=11% Similarity=0.088 Sum_probs=82.4
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe-EEEEEE---cCCCCeEEEEEeCC---CCeEEEeec----C----
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH-EVWSVT---AGSQEIFCFSFGGS---TDYLLAAGC----G---- 145 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~----d---- 145 (389)
.....|+|.|++ .|+.+..+|.|++++ .+++ .+..+. ........|+++|+ ++.|+++.. +
T Consensus 29 ~~P~~ia~~pdG---~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 29 EVPWSIAPLGGG---RYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp SCEEEEEEEETT---EEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCeEEEEcCCC---eEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 456789999998 466667779999997 4454 222211 12356889999987 677777654 2
Q ss_pred CeEEEEECcCC-------cee-eeeeecccCCeeEEEEecCCCCeEEEEeC-------------CCcEEEEecCCCCCCC
Q 016457 146 SQIQFWDWRNK-------KQV-ACLEESHVEDVTQVHFVPNNQNKVVSASV-------------DGLICTFDTGGDINDD 204 (389)
Q Consensus 146 ~~i~iwd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~ 204 (389)
..|..|+.... +.+ ..+..........|+|.|+|. ++++.+. .|.|.-++........
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777776543 111 112211112346799999995 6666432 2456666665321110
Q ss_pred cc---ceee-eccCCceeeEEEecCCCcEEEEE
Q 016457 205 DL---LESV-INVGTSVGKVGFFGETNKHLWCL 233 (389)
Q Consensus 205 ~~---~~~~-~~~~~~i~~~~~~~~~~~~l~~~ 233 (389)
.+ ...+ .++ .....++|.+.++.++++-
T Consensus 184 npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 184 NPFPNSPIWSYGH-RNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp SSSTTCCEEEECC-SCCCEEEECTTTCCEEEEE
T ss_pred CCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEe
Confidence 00 1111 122 2356788985366554443
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.18 E-value=0.088 Score=45.50 Aligned_cols=144 Identities=13% Similarity=0.175 Sum_probs=96.0
Q ss_pred ecCCCCeEEEEecCCeEEEEeCCCceeeeeecCC----CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCe------
Q 016457 46 PKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGH----SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFH------ 115 (389)
Q Consensus 46 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------ 115 (389)
.+.+|..++++. ++.||.-++..+...+.+... -..|..+..+|+| .+||..+. ..|.|-.+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG--~lLAl~g~-~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG--DLLCLFND-NEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS--SEEEEECS-SEEEEEECCTTCSCCCCH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC--CEEEEecC-CeEEEEEecCccccCccc
Confidence 345666666665 578888887754444444332 2357889999999 68887764 478888876221
Q ss_pred ------EEEEEEcC------CCCeEEEEEeCC---CCeEEEeecCCeEEEEECcCCc--eeeeee--------ecccCCe
Q 016457 116 ------EVWSVTAG------SQEIFCFSFGGS---TDYLLAAGCGSQIQFWDWRNKK--QVACLE--------ESHVEDV 170 (389)
Q Consensus 116 ------~~~~~~~~------~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~--~~~~~~--------~~~~~~v 170 (389)
..+.+... ..+|..+.|+|- +..|++-..|+.|++||+.... +. .+. ......|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceE
Confidence 22344432 467999999995 5679999999999999998522 22 222 0122568
Q ss_pred eEEEEecCCCCeEEEEe--CCCcEEEE
Q 016457 171 TQVHFVPNNQNKVVSAS--VDGLICTF 195 (389)
Q Consensus 171 ~~~~~~~~~~~~l~~~~--~d~~i~i~ 195 (389)
.+++|.+++ -.|...+ ..|.|+-.
T Consensus 183 ~S~~Fg~~~-lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDG-LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTS-SCEEEEECTTSCEEEEE
T ss_pred EEEEEcCCC-cEEEEEecCCCCCEEEE
Confidence 899999976 4666654 77877654
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.16 E-value=0.03 Score=43.62 Aligned_cols=174 Identities=11% Similarity=-0.014 Sum_probs=85.7
Q ss_pred CCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCc-cceeeecc--CCceeeEEEecCCCcEEEEEecCCcEEEEEc
Q 016457 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDD-LLESVINV--GTSVGKVGFFGETNKHLWCLTHIETLSIWDW 244 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~--~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~ 244 (389)
..+..++|+|++. +.++ .+|.++-.+..+.....- ......+. -..-..+.|. +++.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEEC-CCCCEEEe--CCCEEEEeCC
Confidence 4678999999884 5555 688877777653221100 00111111 0113567776 77766555 6698887775
Q ss_pred CCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEe-cccceee
Q 016457 245 KDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLV-GGHTAVV 323 (389)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~-~~h~~~v 323 (389)
.+...-.-+.....+....| ..+..+.+.|+|. |.+.. |+.++-....+....... ...... .+.-..-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw-----~~~~~lff~p~G~---Lyav~-dg~lyr~~~P~~~~~~wl-~~~~~~g~~g~~~y 184 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGW-----SGFKFLFFHPNGY---LYAVH-GQQFYKALPPVSNQDNWL-ARATKIGQGGWDTF 184 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSG-----GGEEEEEECTTSC---EEEEE-TTEEEEECCCSSTTCCHH-HHCEEEESSSGGGE
T ss_pred CcCCCCceeccccEeccCCC-----CceEEEEECCCce---EEEEe-CCcEEecCCCCCCCcccc-cccceeccCCcceE
Confidence 33211111111111111111 4578899999996 34444 777543322221110000 001111 0111122
Q ss_pred eeccCCCcccCCCCCCCceeEEEecCCCeEEEEeccCCcccchhhhh
Q 016457 324 RSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCWLSDDSSEINRSWIS 370 (389)
Q Consensus 324 ~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW~~~~~~~~~~~~~~ 370 (389)
+-+ .|.++|.+.+.. +| ++|...+.......++.
T Consensus 185 r~l---------~f~~~G~l~~v~--~g--~~Y~~~~p~~~~~~~~~ 218 (236)
T 1tl2_A 185 KFL---------FFSSVGTLFGVQ--GG--KFYEDYPPSYAYDNWLA 218 (236)
T ss_dssp EEE---------EECTTSCEEEEE--TT--EEEEESCCCSTTCCHHH
T ss_pred EEE---------EECCCCcEEEEe--CC--eEEecCCccccCcchhh
Confidence 223 678888776665 66 67777766555555543
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.11 E-value=0.12 Score=44.90 Aligned_cols=221 Identities=10% Similarity=0.091 Sum_probs=131.7
Q ss_pred CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCe
Q 016457 59 TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138 (389)
Q Consensus 59 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 138 (389)
+.+|.|.|+.++..+..-.-. --+.-.+|.. +.++--. ..++.|+|+++.+.+..+... ..|.--.|- +...
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~--~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWi-s~~~ 118 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS---ADSAIMNPAS--KVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI-SLNT 118 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC---CSEEEECSSS--SCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEE-ETTE
T ss_pred CCeEEEEECCCCCcceecccc---cceeeeCCCC--cEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEec-CCCe
Confidence 347888898876544322211 1234567776 5666654 678999999999999998875 567777886 4444
Q ss_pred EEEeecCCeEEEEECcC-Cceeeeeeecc----cCCeeEEEEecCCCCeEEEEe-------CCCcEEEEecCCCCCCCcc
Q 016457 139 LLAAGCGSQIQFWDWRN-KKQVACLEESH----VEDVTQVHFVPNNQNKVVSAS-------VDGLICTFDTGGDINDDDL 206 (389)
Q Consensus 139 l~~~~~d~~i~iwd~~~-~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~ 206 (389)
|...+ +..|+-|++.. ..+++.+. .| ...|..-..+++.+ +++..+ -.|.+.+|..+.+ .
T Consensus 119 l~lVT-~taVyHWsi~~~s~P~kvFd-R~~~L~~~QIInY~~d~~~k-W~~l~GI~~~~~~v~G~mQLYS~er~-----~ 190 (494)
T 1bpo_A 119 VALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQK-WLLLTGISAQQNRVVGAMQLYSVDRK-----V 190 (494)
T ss_dssp EEEEC-SSEEEEEESSSSCCCEEEEE-CCGGGTTCEEEEEEECTTSS-EEEEEEEEEETTEEEEEEEEEESTTC-----C
T ss_pred EEEEc-CCeeEEecccCCCCchhhee-cchhcccceEEEEEECCCCC-eEEEEeecccCCcccceEEEeecccc-----c
Confidence 44444 47999999974 34555554 33 34577777788886 554433 2467889988843 2
Q ss_pred ceeeeccCCceeeEEEec--CCCcEEEEEecC---CcEEEEEcCCC---c-----eeEEeecccccccCCccCCCCCcee
Q 016457 207 LESVINVGTSVGKVGFFG--ETNKHLWCLTHI---ETLSIWDWKDG---Q-----NVASFENARSLASDSWTLDDVDYFV 273 (389)
Q Consensus 207 ~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~d---~~i~i~d~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~i~ 273 (389)
-..+.+|-..-..+.+.. ....+++.+... +.++|-++... . ....+.... . ...+...
T Consensus 191 sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp---e-----~~~DFPv 262 (494)
T 1bpo_A 191 SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP---E-----AQNDFPV 262 (494)
T ss_dssp EEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCT---T-----STTCCEE
T ss_pred cchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCc---c-----cccCcee
Confidence 333444433332232210 011233333332 68888887532 1 111111000 0 0235566
Q ss_pred eecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 274 DCHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 274 ~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
++..++.-. ++..-+.-|.|++||++++..
T Consensus 263 amqvs~kyg--viyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 263 AMQISEKHD--VVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEETTTT--EEEEEETTSEEEEEETTTCCE
T ss_pred EEEecccCC--EEEEEecCceEEEEeccccee
Confidence 777787766 555666789999999999876
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.07 E-value=0.1 Score=44.54 Aligned_cols=65 Identities=5% Similarity=-0.061 Sum_probs=33.9
Q ss_pred CCCeEEEEec-CCeEEEEeCCC--c--eeeeeecCCCCcEEEEEEeCCCCCCEEEEEec-C---------CeEEEEEccC
Q 016457 49 DWSLMAVSLS-TNVVKLYSPVT--G--QYSGECKGHSSTVNQISFSGPSTPHVLHSCSS-D---------GTIRAWDTRS 113 (389)
Q Consensus 49 ~~~~l~~~~~-d~~i~iw~~~~--~--~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~-d---------g~i~iwd~~~ 113 (389)
++.+++.|+. ...+.+||+.+ . +.+..+......-.+++.. ++ .+++.|+. + ..+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~~--~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-DG--NLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-TT--EEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-CC--EEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 4555566654 34688888863 2 2222222111111223333 44 57777765 2 3588899887
Q ss_pred CeE
Q 016457 114 FHE 116 (389)
Q Consensus 114 ~~~ 116 (389)
.+-
T Consensus 96 ~~W 98 (357)
T 2uvk_A 96 NSW 98 (357)
T ss_dssp TEE
T ss_pred CcE
Confidence 654
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.03 E-value=0.11 Score=43.21 Aligned_cols=220 Identities=9% Similarity=0.082 Sum_probs=129.9
Q ss_pred CeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeE
Q 016457 60 NVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYL 139 (389)
Q Consensus 60 ~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 139 (389)
.+|.|.|+.++.......-. --+...+|.. +.+|.-. ..++.|+|+++.+.++.+... ..|.--.|- +...|
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~---AdsAIMnP~~--~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWi-s~~~L 120 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPAS--KVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI-SLNTV 120 (365)
T ss_dssp EEEEEEETTSTTSCEEEECC---CSEEEECSSS--SEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEEC-SSSEE
T ss_pred CEEEEEECCCCCCccccccc---cceeeeCCCc--cEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEec-CCCeE
Confidence 37888898876544322111 1233457877 5666654 678999999999999998875 688888887 44444
Q ss_pred EEeecCCeEEEEECcC-Cceeeeeeecc----cCCeeEEEEecCCCCeEEEEeC-------CCcEEEEecCCCCCCCccc
Q 016457 140 LAAGCGSQIQFWDWRN-KKQVACLEESH----VEDVTQVHFVPNNQNKVVSASV-------DGLICTFDTGGDINDDDLL 207 (389)
Q Consensus 140 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~ 207 (389)
...+ +..|+-|++.. ..+++.+. .| ...|..-..+++.+ +++..+- .|.+.+|..+.+ ..
T Consensus 121 ~lVT-~taVyHWs~~~~s~P~kvFd-R~~~L~~~QIInY~~d~~~k-W~~l~GI~~~~~~v~G~mQLYS~er~-----~s 192 (365)
T 2xzh_A 121 ALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQK-WLLLTGISAQQNRVVGAMQLYSVDRK-----VS 192 (365)
T ss_dssp EEEE-SSEEEEEESSTTCCCEEEEE-CCGGGTTCEEEEEEECTTSC-EEEEEEEEEETTEEEEEEEEEETTTT-----EE
T ss_pred EEEc-CCcEEEEcccCCCCCceeee-cchhcccceEEEEEECCCCC-EEEEEeEeccCCccceeEEEEeeccc-----cc
Confidence 4444 47999999974 34555554 33 34567777788886 5444332 367889988832 22
Q ss_pred eeeeccCCceeeEEEe--cCCCcEEEEEec---CCcEEEEEcCCC---ce-----eEEeecccccccCCccCCCCCceee
Q 016457 208 ESVINVGTSVGKVGFF--GETNKHLWCLTH---IETLSIWDWKDG---QN-----VASFENARSLASDSWTLDDVDYFVD 274 (389)
Q Consensus 208 ~~~~~~~~~i~~~~~~--~~~~~~l~~~~~---d~~i~i~d~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (389)
..+.+|...-..+.+. +....+++.+.. .+.++|-++... .. ...+..... ...+...+
T Consensus 193 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe--------a~~DFPVa 264 (365)
T 2xzh_A 193 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE--------AQNDFPVA 264 (365)
T ss_dssp EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT--------CTTCCEEE
T ss_pred ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc--------ccCCceEE
Confidence 3333443222222211 011123333322 258888887432 11 111111000 02355667
Q ss_pred ecccCCCCeEEEEEecCCceEEEEEeccCCc
Q 016457 275 CHYPGEGENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 275 ~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
+..++.-. ++..-+.-|.|++||++++..
T Consensus 265 mqvs~kyg--viyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 265 MQISEKHD--VVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp EEEETTTT--EEEEEETTSEEEEEETTTCCE
T ss_pred EEecccCC--EEEEEeCCcEEEEEEcccCcE
Confidence 77777766 555566789999999999876
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.00 E-value=0.26 Score=47.02 Aligned_cols=237 Identities=9% Similarity=0.079 Sum_probs=130.4
Q ss_pred ceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE
Q 016457 40 YVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS 119 (389)
Q Consensus 40 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 119 (389)
.|.++...+++..|.+|+. +-+..++..+++......-....|.++....++ .|..|+.+ -+.+++..+++....
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g---~lWigT~~-Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG---DLLAGTDN-GLYVYHNDTTPLQHI 266 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC---CEEEEETT-EEEEECCTTSCCEEE
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC---CEEEEeCC-ceeEEecCCCcEEEE
Confidence 4788888877776777774 458888987765432211123458888877666 56666655 478888776544322
Q ss_pred EEc-------CCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeee------ecccCCeeEEEEecCCCCeEEEE
Q 016457 120 VTA-------GSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLE------ESHVEDVTQVHFVPNNQNKVVSA 186 (389)
Q Consensus 120 ~~~-------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~ 186 (389)
... ....|.++.... .+.|.+++..| +.++.... ....+. ......|.++.-..+|. |..|
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~-~g~lWiGT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~--lWiG 340 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQ-EHNIWLGTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGF--YWFG 340 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECT-TCCEEEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCC--EEEE
T ss_pred EcCCCCcCcCCcCeEEEEEEcC-CCCEEEEeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCC--EEEe
Confidence 111 134688888874 45666666666 54443221 111111 01234688888877773 5556
Q ss_pred eCCCcEEEEecCCCCCCCccceeee-------ccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccccc
Q 016457 187 SVDGLICTFDTGGDINDDDLLESVI-------NVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSL 259 (389)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 259 (389)
+.+| +..++..++.. .....+. .....|.++.-. .++ .|..|+ ++-|..||..+++... +......
T Consensus 341 t~~G-l~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g-~lWigt-~~GL~~~~~~~~~~~~-~~~~~~~ 413 (758)
T 3ott_A 341 GANG-LIRFTDPAGER--HDAIWYRMGDKTYPLSHNRIRHIYED-KEQ-QLWIAT-DGSINRYDYATRQFIH-YNIVDNT 413 (758)
T ss_dssp ETTE-EEEESCTTSSC--CCCEEECTTCSSSCCSCSCEEEEEEC-TTS-CEEEEE-TTEEEEEETTTTEEEE-EEEECCC
T ss_pred eCCc-ceeeccccccc--ceeEEeccCCcCCCCCCCceEEEEEC-CCC-CEEEEe-CCcHhhcCcCCCcEEE-eecCCCc
Confidence 6554 66777654211 0111111 012356777665 444 466666 4578899988765432 2210000
Q ss_pred ccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEecc
Q 016457 260 ASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 260 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
.. .....|.++....+|. |..|+..+-|.+++..+
T Consensus 414 ~~-----~~~~~v~~i~~d~~g~---lWigT~~~Gl~~~~~~~ 448 (758)
T 3ott_A 414 GT-----YNTNWTYYIFEDTAGQ---LWISTCLGGIFVVDKHK 448 (758)
T ss_dssp -------CBSSSEEEEEECTTSE---EEEEESSSCEEEEEHHH
T ss_pred CC-----CCCceEEEEEEcCCCC---EEEEECCCceEEEcccc
Confidence 00 0124577777666653 34455555688888653
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.97 E-value=0.14 Score=43.40 Aligned_cols=237 Identities=15% Similarity=0.085 Sum_probs=123.7
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCcee--eeee----cCCCCcEEEEEEeCC----CCCCEEEEE--ecCCe
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQY--SGEC----KGHSSTVNQISFSGP----STPHVLHSC--SSDGT 105 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~----~~~~~~v~~i~~~~~----~~~~~l~s~--~~dg~ 105 (389)
-.....|+|.|||+++++--..|.|++++..+++. +..+ .........|+++|+ + .+.++- ..++.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g--~lYv~yt~~~~~~ 108 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDH--MVYAYFTSASDNR 108 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHC--EEEEEEECSSSEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCC--EEEEEEecCCCCE
Confidence 45678999999998666655489999998765543 2212 123456899999985 3 333332 23445
Q ss_pred EEEEEccCC----------eEEE-EEEc-CCCCeEEEEEeCCCCeEEEeec-------------CCeEEEEECcCCc---
Q 016457 106 IRAWDTRSF----------HEVW-SVTA-GSQEIFCFSFGGSTDYLLAAGC-------------GSQIQFWDWRNKK--- 157 (389)
Q Consensus 106 i~iwd~~~~----------~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------d~~i~iwd~~~~~--- 157 (389)
|.-|.+..+ +.+. .+.. ....-..|.|.|++..+++.+. .|.|.-.+....-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 655655431 1221 2221 1234567999998876666553 2455555543210
Q ss_pred ----eeeeeeecccCCeeEEEEecCCCCeEEEE-eCCCcEEEEecCCCCCC--------------CccceeeeccCCcee
Q 016457 158 ----QVACLEESHVEDVTQVHFVPNNQNKVVSA-SVDGLICTFDTGGDIND--------------DDLLESVINVGTSVG 218 (389)
Q Consensus 158 ----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~--------------~~~~~~~~~~~~~i~ 218 (389)
....+..+|. ....++|+|++. ++++- +.++.-.|--+..+... ..++..+..+.....
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 0112222343 356899999874 44443 22322222222222110 111222222223566
Q ss_pred eEEEecCCCcEEEEEecCCcEEEEEcCCCcee----EEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCc
Q 016457 219 KVGFFGETNKHLWCLTHIETLSIWDWKDGQNV----ASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAG 293 (389)
Q Consensus 219 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg 293 (389)
.++|. .+.++...-..+.|....+.....+ ..+.+ ....+.+++..|||. +|+++...||
T Consensus 267 G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~------------~~gR~~dv~~~pDG~-lyv~td~~~g 330 (347)
T 3das_A 267 GIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG------------EYGRLRTVAPAGGDK-LWLVTSNTDG 330 (347)
T ss_dssp EEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT------------TSSCEEEEEEEETTE-EEEEECTTSS
T ss_pred ceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecC------------CCCCccEEEECCCCc-EEEEEcCCCC
Confidence 77886 3555555555566666666544321 11111 225677888888774 3444444444
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.96 E-value=0.097 Score=43.71 Aligned_cols=185 Identities=9% Similarity=0.072 Sum_probs=92.4
Q ss_pred CCCeEEEEec----C-----CeEEEEeCCCcee--eeeecCCCCcEEEEEEeCCCCCCEEEEEecC-----CeEEEEEcc
Q 016457 49 DWSLMAVSLS----T-----NVVKLYSPVTGQY--SGECKGHSSTVNQISFSGPSTPHVLHSCSSD-----GTIRAWDTR 112 (389)
Q Consensus 49 ~~~~l~~~~~----d-----~~i~iw~~~~~~~--~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-----g~i~iwd~~ 112 (389)
++.+++.|+. + ..+.+||+.+.+- +..+......- +++.. ++ .+++.|+.+ ..+.+||+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~--~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVI-DG--HIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEE-TT--EEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEE-CC--EEEEEcCCCCCcccccEEEECCC
Confidence 5667777765 2 4688899877642 22222111122 22222 44 577776643 357888988
Q ss_pred CCeEEEE--EEcCCCCeEEEEEeCCCCeEEEeecC-----CeEEEEECcCCcee--eeeeecccCCeeEEEEecCCCCeE
Q 016457 113 SFHEVWS--VTAGSQEIFCFSFGGSTDYLLAAGCG-----SQIQFWDWRNKKQV--ACLEESHVEDVTQVHFVPNNQNKV 183 (389)
Q Consensus 113 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l 183 (389)
+.+-... +......-.++.+ ++..++.+|.+ ..+.+||+.+.+-. ..+. ....-.+++.. ++ .++
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~-~~-~iy 219 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN--TIRSGAGVCVL-HN-CIY 219 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEEE-TT-EEE
T ss_pred CCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC--CccccceEEEE-CC-EEE
Confidence 7654322 1111122222333 45555555543 46899998876432 2221 11111223333 44 377
Q ss_pred EEEeCC-----CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC-----CcEEEEEcCCCc
Q 016457 184 VSASVD-----GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI-----ETLSIWDWKDGQ 248 (389)
Q Consensus 184 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 248 (389)
+.|+.+ ..+.+||+.+.. ...+.... ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETET--WTFVAPMK-HRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTE--EEECCCCS-SCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEeCCCCCCccceEEEEeCCCCc--EEECCCCC-CCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 777664 568999988542 11111111 11111233333 45677777654 357788877653
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.021 Score=48.24 Aligned_cols=106 Identities=18% Similarity=0.203 Sum_probs=68.6
Q ss_pred CEEEEEecCCeEEEEEccCCeEEEEEEcC-CCCeEEEEEe--CCCCeEEEe--ecCCeEEEEECcCCceeeeeeecccCC
Q 016457 95 HVLHSCSSDGTIRAWDTRSFHEVWSVTAG-SQEIFCFSFG--GSTDYLLAA--GCGSQIQFWDWRNKKQVACLEESHVED 169 (389)
Q Consensus 95 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (389)
.+++.++.||.|.-.|..+|+.+.+++.. ..++....-. +.++.+++. ..||.|..+|..++.....+.......
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 38899999999999999999999999864 1223221110 123345554 469999999998886554443111001
Q ss_pred eeEEEEe-----------cCCCCeEEEEeCCCcEEEEecCCCC
Q 016457 170 VTQVHFV-----------PNNQNKVVSASVDGLICTFDTGGDI 201 (389)
Q Consensus 170 v~~~~~~-----------~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (389)
..-+... ..+ ..+++|+.+|.+.-.|++++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~-g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVED-EKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp TCSEEEECC----------CC-EEEEECEEEEEEEEEETTTCC
T ss_pred ccccccCCCceeecccccccC-CEEEEEecCCEEEEEECCCCc
Confidence 1112211 023 278999999999999999874
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.84 E-value=0.082 Score=41.21 Aligned_cols=143 Identities=10% Similarity=-0.018 Sum_probs=79.1
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCc--------EEEEEEeCCCCCCEEEEEecCCeEEEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSST--------VNQISFSGPSTPHVLHSCSSDGTIRAWD 110 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--------v~~i~~~~~~~~~~l~s~~~dg~i~iwd 110 (389)
..+..++|+|+|.+.++ .+|.+.-.+..+.+.. .+.+.... ..++.|.|++ .+.++ .||.|.-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~t~IG~~Gw~~F~a~~fD~~G--~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRAKKIGNGGWNQFQFLFFDPNG--YLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHCEEEECSCGGGCSEEEECTTS--CEEEE--ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccccEecccccccceEEEECCCC--CEEEe--CCCEEEEeC
Confidence 46789999999986666 6888777776542221 11111222 4789999998 45555 669887777
Q ss_pred ccCC-e------EEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce------eeeeeecccCCeeEEEEec
Q 016457 111 TRSF-H------EVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ------VACLEESHVEDVTQVHFVP 177 (389)
Q Consensus 111 ~~~~-~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~ 177 (389)
..+. . -...-+..-..+..|.+.|++...++. |+.++-....+... ...+-...-...+-+.|.+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 5321 1 011111122578899999776555554 77754433322210 1111101222345577888
Q ss_pred CCCCeEEEEeCCCcEE
Q 016457 178 NNQNKVVSASVDGLIC 193 (389)
Q Consensus 178 ~~~~~l~~~~~d~~i~ 193 (389)
++. ++++. ++.++
T Consensus 192 ~G~-l~~v~--~g~~Y 204 (236)
T 1tl2_A 192 VGT-LFGVQ--GGKFY 204 (236)
T ss_dssp TSC-EEEEE--TTEEE
T ss_pred CCc-EEEEe--CCeEE
Confidence 873 54444 77443
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.67 E-value=0.23 Score=41.55 Aligned_cols=144 Identities=8% Similarity=0.032 Sum_probs=73.7
Q ss_pred cCCCCeEEEEec-----C------CeEEEEeCCCceee--eeecCCCCcEEEEEEeCCCCCCEEEEEecC--------Ce
Q 016457 47 KNDWSLMAVSLS-----T------NVVKLYSPVTGQYS--GECKGHSSTVNQISFSGPSTPHVLHSCSSD--------GT 105 (389)
Q Consensus 47 ~~~~~~l~~~~~-----d------~~i~iw~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d--------g~ 105 (389)
..++.+++.|+. . ..+.+||..+++-. ..+...... .+++.. ++ .+++.|+.+ ..
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~lyv~GG~~~~~~~~~~~~ 118 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL-FGLGEA-LN--SIYVVGGREIKDGERCLDS 118 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES-CEEEEE-TT--EEEEECCEESSTTCCBCCC
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc-eeEEEE-CC--EEEEEeCCcCCCCCcccce
Confidence 346778888873 1 13778888776432 222211111 122233 44 577777642 35
Q ss_pred EEEEEccCCeEEEE--EEcCCCCeEEEEEeCCCCeEEEeec-C-----CeEEEEECcCCcee--eeeeecccCCeeEEEE
Q 016457 106 IRAWDTRSFHEVWS--VTAGSQEIFCFSFGGSTDYLLAAGC-G-----SQIQFWDWRNKKQV--ACLEESHVEDVTQVHF 175 (389)
Q Consensus 106 i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~ 175 (389)
+.+||+.+.+-... +......-..+. . ++..++.+|. + ..+.+||+.+.+-. ..+. ....-.+++.
T Consensus 119 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~ 194 (315)
T 4asc_A 119 VMCYDRLSFKWGESDPLPYVVYGHTVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ--TARSLFGATV 194 (315)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEE
T ss_pred EEEECCCCCcEeECCCCCCcccceeEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC--CchhceEEEE
Confidence 88899887653321 111112222222 2 4555555655 2 47899998876432 2222 1111122232
Q ss_pred ecCCCCeEEEEeCCC-----cEEEEecCCC
Q 016457 176 VPNNQNKVVSASVDG-----LICTFDTGGD 200 (389)
Q Consensus 176 ~~~~~~~l~~~~~d~-----~i~i~d~~~~ 200 (389)
. ++ .+++.|+.++ .+.+||+.+.
T Consensus 195 ~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 195 H-DG-RIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp E-TT-EEEEEEEECSSSEEEEEEEEETTTT
T ss_pred E-CC-EEEEEeccCCCCccceEEEEECCCC
Confidence 2 44 3777777654 4888998854
No 334
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.59 E-value=0.29 Score=41.69 Aligned_cols=191 Identities=8% Similarity=0.072 Sum_probs=106.6
Q ss_pred cEEEEEEeCCCCCCEEEEEe-------------cCCeEEEEEccC--CeE-EEEEEc-----CCCCeEEEEEeC--CCC-
Q 016457 82 TVNQISFSGPSTPHVLHSCS-------------SDGTIRAWDTRS--FHE-VWSVTA-----GSQEIFCFSFGG--STD- 137 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~-------------~dg~i~iwd~~~--~~~-~~~~~~-----~~~~v~~~~~~~--~~~- 137 (389)
..-+++..|++ .+++++ .+|.|.++|+.+ ++. ...+.+ .......+.+.+ ++.
T Consensus 51 G~EDi~~~~~G---~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~ 127 (355)
T 3sre_A 51 GSEDLEILPNG---LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTV 127 (355)
T ss_dssp CCCEEEECTTS---EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCE
T ss_pred CcceeEEcCCC---eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcE
Confidence 34566777776 455554 689999999873 222 122332 123567777755 233
Q ss_pred eEEEeec---CCeEEEEECcCCc----eeeeeeecccCCeeEEEEecCCCCeEEEEe-----------------CCCcEE
Q 016457 138 YLLAAGC---GSQIQFWDWRNKK----QVACLEESHVEDVTQVHFVPNNQNKVVSAS-----------------VDGLIC 193 (389)
Q Consensus 138 ~l~~~~~---d~~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~ 193 (389)
+|+++.. +..|.+|++.... .+.++....-...+.+++.++|. ++++.. ..|.|+
T Consensus 128 ~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 128 YLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEE
Confidence 4666543 4678888776532 22333311224578999999985 666543 124455
Q ss_pred EEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEE-EecCCcEEEEEcCC-Cce--eEEeecccccccCCccCCCC
Q 016457 194 TFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWC-LTHIETLSIWDWKD-GQN--VASFENARSLASDSWTLDDV 269 (389)
Q Consensus 194 i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 269 (389)
.+|.. .+......-...+.++|+ ++++.|+. -+..+.|..|++.. ++. ...+. ..
T Consensus 207 r~d~~-------~~~~~~~~l~~pNGia~s-pDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-------------~~ 265 (355)
T 3sre_A 207 YYSPN-------DVRVVAEGFDFANGINIS-PDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-------------FD 265 (355)
T ss_dssp EECTT-------CCEEEEEEESSEEEEEEC-TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-------------CS
T ss_pred EEECC-------eEEEeecCCcccCcceEC-CCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-------------CC
Confidence 55542 122233333456899999 56655554 45678999999863 322 12221 12
Q ss_pred CceeeecccC-CCCeEEEEEecCC-ceEEEEE
Q 016457 270 DYFVDCHYPG-EGENLWVIGGTGA-GTVGYFP 299 (389)
Q Consensus 270 ~~i~~~~~~~-~~~~~~l~~g~~d-g~i~i~~ 299 (389)
...-.+++.+ +|+ +.+++..+ +.|..|+
T Consensus 266 g~PDGi~vD~e~G~--lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 266 TLVDNISVDPVTGD--LWVGCHPNGMRIFFYD 295 (355)
T ss_dssp SEEEEEEECTTTCC--EEEEEESCHHHHHSCC
T ss_pred CCCceEEEeCCCCc--EEEEecCCceEEEEEC
Confidence 4566778888 476 44433323 3444443
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.57 E-value=0.37 Score=48.46 Aligned_cols=228 Identities=10% Similarity=0.099 Sum_probs=125.2
Q ss_pred CCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCe
Q 016457 59 TNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDY 138 (389)
Q Consensus 59 d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 138 (389)
..+|.|.|+.++..+..-. -.--+...+|.. +.++.- ...++.|+|+.+.+.+..+... .+|.--.|- +...
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~--~iiALr-ag~~lQiFnl~~k~klks~~~~-e~VvfWkWi-s~~~ 118 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPAS--KVIALK-AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWI-SLNT 118 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCCCc--ceEEEe-cCCeEEEeehHHhhhhcccccC-CCceEEEec-CCCe
Confidence 3478888988765442211 111233457766 455554 3678999999998888887764 567777886 3444
Q ss_pred EEEeecCCeEEEEECcC-Cceeeeeeecc----cCCeeEEEEecCCCCeEEEEe------CCCcEEEEecCCCCCCCccc
Q 016457 139 LLAAGCGSQIQFWDWRN-KKQVACLEESH----VEDVTQVHFVPNNQNKVVSAS------VDGLICTFDTGGDINDDDLL 207 (389)
Q Consensus 139 l~~~~~d~~i~iwd~~~-~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~ 207 (389)
+...+ +..|.-|++.. ..++..+. .| ...|..-..+++.+..+++|- -.|.+.+|....+. .
T Consensus 119 l~lVT-~~aVyHW~~~~~s~P~k~fd-R~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-----s 191 (1630)
T 1xi4_A 119 VALVT-DNAVYHWSMEGESQPVKMFD-RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----S 191 (1630)
T ss_pred eEEEc-CCeEEEeccCCCCccHHHHh-cchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-----c
Confidence 44333 47999999964 34444443 33 355777778888863343432 35788899887432 2
Q ss_pred eeeeccCCceeeEEEe--cCCCcEEEEEec---CCcEEEEEcCCC-ceeEEeecccccccCCccCC-CCCceeeecccCC
Q 016457 208 ESVINVGTSVGKVGFF--GETNKHLWCLTH---IETLSIWDWKDG-QNVASFENARSLASDSWTLD-DVDYFVDCHYPGE 280 (389)
Q Consensus 208 ~~~~~~~~~i~~~~~~--~~~~~~l~~~~~---d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~ 280 (389)
..+.+|-..-..+... +....+++.+.. .+.++|-++... ..-..|.. ......++.+ ..+....+..++.
T Consensus 192 Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~k--k~~~~~~~~~~~~Dfpv~~~vs~k 269 (1630)
T 1xi4_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK--KAVDVFFPPEAQNDFPVAMQISEK 269 (1630)
T ss_pred hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcc--ccccccCCcccccCcceEEEeccc
Confidence 2223333222222221 011112222211 257888887432 00001100 0000000000 1244556677776
Q ss_pred CCeEEEEEecCCceEEEEEeccCCc
Q 016457 281 GENLWVIGGTGAGTVGYFPVNYGGA 305 (389)
Q Consensus 281 ~~~~~l~~g~~dg~i~i~~~~~~~~ 305 (389)
-. ++..-+.-|.|++||+.++..
T Consensus 270 ~g--~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 270 HD--VVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred cC--EEEEEecCceEEEEecccchh
Confidence 66 555666789999999999875
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.48 E-value=0.46 Score=42.68 Aligned_cols=242 Identities=9% Similarity=-0.004 Sum_probs=132.2
Q ss_pred eEEEEecCCeEEEEeCCCceeeeeecCCC-------------------------CcE--EEEEEeC---CCCCCEEEEEe
Q 016457 52 LMAVSLSTNVVKLYSPVTGQYSGECKGHS-------------------------STV--NQISFSG---PSTPHVLHSCS 101 (389)
Q Consensus 52 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-------------------------~~v--~~i~~~~---~~~~~~l~s~~ 101 (389)
.|.+|+..|.|+|+-+.+++.++.+...+ +.. ..+.+.. +| ++|+.-.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDG--rylfiNd 149 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDG--KYLFIND 149 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEE--EEEEEEE
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeee--EEEEEec
Confidence 57888999999999999888776542100 001 1222221 23 4566555
Q ss_pred -cCCeEEEEEccCCeEEEEEEcC-CCCeEEEEEe--CCCCeEEEeec-------CCeE---------E---EEECcCCce
Q 016457 102 -SDGTIRAWDTRSFHEVWSVTAG-SQEIFCFSFG--GSTDYLLAAGC-------GSQI---------Q---FWDWRNKKQ 158 (389)
Q Consensus 102 -~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~-------d~~i---------~---iwd~~~~~~ 158 (389)
.+..|...+++..++-..+... ...+.++.|- |+..++++.+. ||.. . ..|..+.+.
T Consensus 150 kan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v 229 (638)
T 3sbq_A 150 KANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEM 229 (638)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSE
T ss_pred CCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEE
Confidence 4567888888888887777654 5678888886 67888888875 3331 1 122222332
Q ss_pred eeeeeecccCCeeEEEEecCCCCeEEEEeCCC---------------cEEEEecC-------------------------
Q 016457 159 VACLEESHVEDVTQVHFVPNNQNKVVSASVDG---------------LICTFDTG------------------------- 198 (389)
Q Consensus 159 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---------------~i~i~d~~------------------------- 198 (389)
..++. -..........+++. +.++.+.+. .+.++++.
T Consensus 230 ~~Qv~--v~gnld~~~~~~~g~-~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~ 306 (638)
T 3sbq_A 230 AFQVI--VDGNLDNTDADYTGR-FAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGR 306 (638)
T ss_dssp EEEEE--ESSCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECS
T ss_pred EEEEE--cCCChhhcCCCCCCC-EEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccc
Confidence 22222 112233344556665 555444321 24444442
Q ss_pred CCCCCCccceeeeccCCceeeEEEecCCCcEEEEEec-CCcEEEEEcCCCceeE--EeecccccccCCccCCCCCceeee
Q 016457 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTH-IETLSIWDWKDGQNVA--SFENARSLASDSWTLDDVDYFVDC 275 (389)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~ 275 (389)
........+..+.........+..+ |+|+++++++. +.++.++|++...... .+...+...... .+-.......
T Consensus 307 ~~~~~~~~~~~~iP~pksPHGv~vs-PDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae--~e~GlGPlHt 383 (638)
T 3sbq_A 307 KKDGKDSKFTRYVPVPKNPHGCNTS-SDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE--PELGLGPLHT 383 (638)
T ss_dssp CBTTBCCSSEEEEEESSSCCCEEEC-TTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC--CBCCSCEEEE
T ss_pred cccccCCceEEEEeCCCCCcceeeC-CCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee--ccCCCcccEE
Confidence 1000001222233334455677888 67777766654 6799999987321100 000000000000 0012456778
Q ss_pred cccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 276 HYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 276 ~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
+|.++|. ...+-.-|..|..|++...
T Consensus 384 ~Fd~~G~--aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 384 TFDGRGN--AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EECSSSE--EEEEETTTTEEEEEEHHHH
T ss_pred EECCCCc--eEeeeeecceEEEEeccHH
Confidence 9999885 4567778999999999764
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.17 E-value=0.47 Score=39.67 Aligned_cols=146 Identities=8% Similarity=-0.008 Sum_probs=71.8
Q ss_pred cCCCCeEEEEec----CC-------eEEEEeCCCceee--eeecCCCCcEEEEEEeCCCCCCEEEEEecC-------CeE
Q 016457 47 KNDWSLMAVSLS----TN-------VVKLYSPVTGQYS--GECKGHSSTVNQISFSGPSTPHVLHSCSSD-------GTI 106 (389)
Q Consensus 47 ~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~--~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d-------g~i 106 (389)
..++.+++.|+. ++ .+.+||..+++-. ..+...... .+++.. ++ .+++.|+.+ ..+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~--~iyv~GG~~~~~~~~~~~~ 129 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGEV-DD--KIYVVAGKDLQTEASLDSV 129 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEEE-TT--EEEEEEEEBTTTCCEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEEE-CC--EEEEEcCccCCCCcccceE
Confidence 456778888873 11 2778888765432 222211111 222333 44 577777754 247
Q ss_pred EEEEccCCeEEEEEEcC--CCCeEEEEEeCCCCeEEEeec------CCeEEEEECcCCceeeeeeecccCCeeEEEEecC
Q 016457 107 RAWDTRSFHEVWSVTAG--SQEIFCFSFGGSTDYLLAAGC------GSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPN 178 (389)
Q Consensus 107 ~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~------d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 178 (389)
.+||+.+.+-...-... ...- +++.. ++..++.+|. -..+.+||+.+.+-...-.......-.+++.. +
T Consensus 130 ~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 206 (318)
T 2woz_A 130 LCYDPVAAKWSEVKNLPIKVYGH-NVISH-NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-K 206 (318)
T ss_dssp EEEETTTTEEEEECCCSSCEESC-EEEEE-TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T
T ss_pred EEEeCCCCCEeECCCCCCccccc-EEEEE-CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-C
Confidence 78888776543221111 1111 22222 4555555554 24689999887643221110111111223333 3
Q ss_pred CCCeEEEEeCC-----CcEEEEecCCC
Q 016457 179 NQNKVVSASVD-----GLICTFDTGGD 200 (389)
Q Consensus 179 ~~~~l~~~~~d-----~~i~i~d~~~~ 200 (389)
+ .+++.|+.+ ..+.+||+.+.
T Consensus 207 ~-~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 207 G-KIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp T-EEEEEEEEETTEEEEEEEEEETTTC
T ss_pred C-EEEEEcCcCCCCccceEEEEECCCC
Confidence 4 377777653 34778898754
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.63 E-value=0.89 Score=38.65 Aligned_cols=142 Identities=11% Similarity=-0.102 Sum_probs=64.7
Q ss_pred CeEEEEEccCCeEEEEEEcCC-CCe-EEEEEeCCCCeEEEeec------CCeEEEEEC--cCCce--eeeeeecccCC-e
Q 016457 104 GTIRAWDTRSFHEVWSVTAGS-QEI-FCFSFGGSTDYLLAAGC------GSQIQFWDW--RNKKQ--VACLEESHVED-V 170 (389)
Q Consensus 104 g~i~iwd~~~~~~~~~~~~~~-~~v-~~~~~~~~~~~l~~~~~------d~~i~iwd~--~~~~~--~~~~~~~~~~~-v 170 (389)
..+.+||+.+.+-...-.... ..- .+++.. ++..++.+|. ...+..||+ .+.+- +..+. ..... -
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~-~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS-SPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS-TTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC-CCccccc
Confidence 578899998765443322221 111 233333 4555555553 246777877 43322 21221 11111 1
Q ss_pred eEEEEecCCCCeEEEEeCC----------------------CcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCc
Q 016457 171 TQVHFVPNNQNKVVSASVD----------------------GLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNK 228 (389)
Q Consensus 171 ~~~~~~~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 228 (389)
.+++.. ++. +++.|+.+ ..+.+||+.+.. ...+..+...... ..+.. .++.
T Consensus 246 ~~~~~~-~~~-iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~-~~~~~--~~~~ 318 (357)
T 2uvk_A 246 GFAGIS-NDS-LIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK--WDKSGELSQGRAY-GVSLP--WNNS 318 (357)
T ss_dssp CEEEEE-TTE-EEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBS-SEEEE--ETTE
T ss_pred ceEEEE-CCE-EEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc--eeeCCCCCCCccc-ceeEE--eCCE
Confidence 122322 343 77777632 247789988542 2222221111111 12222 3567
Q ss_pred EEEEEecCC------cEEEEEcCCCceeEEee
Q 016457 229 HLWCLTHIE------TLSIWDWKDGQNVASFE 254 (389)
Q Consensus 229 ~l~~~~~d~------~i~i~d~~~~~~~~~~~ 254 (389)
+++.|+.++ .+.++++++++.+....
T Consensus 319 i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 319 LLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred EEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 778887653 46666888776665443
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.62 E-value=0.83 Score=38.13 Aligned_cols=139 Identities=13% Similarity=0.037 Sum_probs=67.5
Q ss_pred EEEEEecCCeEEEEEccCCeEEEE-EEcCC-CCeEEEEEeCCCCeEEEeec----CC-------eEEEEECcCCceee--
Q 016457 96 VLHSCSSDGTIRAWDTRSFHEVWS-VTAGS-QEIFCFSFGGSTDYLLAAGC----GS-------QIQFWDWRNKKQVA-- 160 (389)
Q Consensus 96 ~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~-~~v~~~~~~~~~~~l~~~~~----d~-------~i~iwd~~~~~~~~-- 160 (389)
+++.|+. .+..||..+.+-... +.... ..-.+++. .++..++.+|. ++ .+..||..+.+-..
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVT-QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEEC-SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEE-ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4444443 378999988775441 21111 12223333 25556666662 11 27788887664322
Q ss_pred eeeecccCCeeEEEEecCCCCeEEEEeCC-------CcEEEEecCCCCCCCccceeeeccCCce--eeEEEecCCCcEEE
Q 016457 161 CLEESHVEDVTQVHFVPNNQNKVVSASVD-------GLICTFDTGGDINDDDLLESVINVGTSV--GKVGFFGETNKHLW 231 (389)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~l~ 231 (389)
.+. ....-.+++.. ++ .+++.|+.+ ..+.+||..+.. ...+ .....+. .+++. .++.+++
T Consensus 95 ~~p--~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~---~~~p~~r~~~~~~~--~~~~iyv 163 (318)
T 2woz_A 95 PLP--SARCLFGLGEV-DD-KIYVVAGKDLQTEASLDSVLCYDPVAAK--WSEV---KNLPIKVYGHNVIS--HNGMIYC 163 (318)
T ss_dssp CBS--SCBCSCEEEEE-TT-EEEEEEEEBTTTCCEEEEEEEEETTTTE--EEEE---CCCSSCEESCEEEE--ETTEEEE
T ss_pred CCC--ccccccceEEE-CC-EEEEEcCccCCCCcccceEEEEeCCCCC--EeEC---CCCCCcccccEEEE--ECCEEEE
Confidence 222 11111223332 34 377777754 347888887532 1111 1111111 12222 3456666
Q ss_pred EEecC------CcEEEEEcCCCc
Q 016457 232 CLTHI------ETLSIWDWKDGQ 248 (389)
Q Consensus 232 ~~~~d------~~i~i~d~~~~~ 248 (389)
.|+.+ ..+.+||+.+.+
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTE
T ss_pred EcCCCCCCCccceEEEEcCCCCE
Confidence 66542 368899988764
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.53 E-value=1.2 Score=39.43 Aligned_cols=106 Identities=9% Similarity=0.056 Sum_probs=61.6
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEeCCCcee--eeeecC------CCCcEEEEEEeCC---CCCCEEEEEec----
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQY--SGECKG------HSSTVNQISFSGP---STPHVLHSCSS---- 102 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~------~~~~v~~i~~~~~---~~~~~l~s~~~---- 102 (389)
-.....|+|.|+|+++++-...+.|++++..+++. +..+.. .......|+|+|+ +. .+.++-+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g-~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP-YIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSC-EEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCC-EEEEEEeccccC
Confidence 34567999999998666654345799888655543 222221 2456789999995 31 34444332
Q ss_pred --------CCeEEEEEccCC-------eEEE-EEEc-CCCCeEEEEEeCCCCeEEEeec
Q 016457 103 --------DGTIRAWDTRSF-------HEVW-SVTA-GSQEIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 103 --------dg~i~iwd~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~ 144 (389)
...|.-++.... +.+. .+.. .......|+|.|++..+++.+.
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 1121 1221 1345789999998877776554
No 341
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.47 E-value=1 Score=38.18 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=63.6
Q ss_pred CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEE--E----EcCCCCeEEEEEeCC---CCeEEEee---cCCe
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWS--V----TAGSQEIFCFSFGGS---TDYLLAAG---CGSQ 147 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~----~~~~~~v~~~~~~~~---~~~l~~~~---~d~~ 147 (389)
-.....|+|.|++ .++++--..|.|++++..+++.... + .........|+++|+ ++.|+++. .++.
T Consensus 31 L~~P~~ia~~pdG--~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 31 LNSPWGLAPLPGG--DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CSSEEEEEECTTS--CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCceEEEEcCCC--cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3456899999999 5666554489999998765554221 1 122567899999985 56666642 3456
Q ss_pred EEEEECcCC----------cee-eeeeecccCCeeEEEEecCCCCeEEEEe
Q 016457 148 IQFWDWRNK----------KQV-ACLEESHVEDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 148 i~iwd~~~~----------~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 187 (389)
|.-|.+..+ +.+ ..+.......-..|+|.|+|. ++++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEEC
Confidence 666655431 111 112211122346799999995 666654
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.28 E-value=1.7 Score=40.95 Aligned_cols=198 Identities=8% Similarity=-0.020 Sum_probs=101.1
Q ss_pred CCCCeEEEEecC----CeEEEEeCCCceeeeee-c------CCCCcEEEEEEeC-CCCCCEEEEEecCC------eEEEE
Q 016457 48 NDWSLMAVSLST----NVVKLYSPVTGQYSGEC-K------GHSSTVNQISFSG-PSTPHVLHSCSSDG------TIRAW 109 (389)
Q Consensus 48 ~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~-~------~~~~~v~~i~~~~-~~~~~~l~s~~~dg------~i~iw 109 (389)
.++.+++.|+.+ ..+.+||..+++-...- . .....-.+++..+ ++ .+++.|+.++ .+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~--~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN--QLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT--EEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC--EEEEEcCCCCCCCccccEEEE
Confidence 456677777753 46888998776432211 1 1111123344443 55 5777777543 47788
Q ss_pred EccCCeEEEE--EEcCCCCeEEEEEeCCCCeEEEeecCC--eEEEEECcCCceeee-----eeecccCCeeEEEEecCCC
Q 016457 110 DTRSFHEVWS--VTAGSQEIFCFSFGGSTDYLLAAGCGS--QIQFWDWRNKKQVAC-----LEESHVEDVTQVHFVPNNQ 180 (389)
Q Consensus 110 d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~ 180 (389)
|+.+.+-... +......-.++.+. ++..++.||.++ .+.+||..+.+-... +. .......++.+.....
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p-~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF-QNSLVSAGLEFDPVSK 551 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG-GSCCBSCEEEEETTTT
T ss_pred eCCCCcEEECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC-CcccceeEEEEeCCCC
Confidence 8887643322 11111222223322 566666666643 799999887643221 11 1122233456665522
Q ss_pred CeEEEEeC--C-----CcEEEEecCCCCC--C--CccceeeeccCCceeeEEEecCCCcEEEEEec--------CCcEEE
Q 016457 181 NKVVSASV--D-----GLICTFDTGGDIN--D--DDLLESVINVGTSVGKVGFFGETNKHLWCLTH--------IETLSI 241 (389)
Q Consensus 181 ~~l~~~~~--d-----~~i~i~d~~~~~~--~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--------d~~i~i 241 (389)
.+++.|+. + ..+.+||+.+..- . ...+.........-.+++.. .++.+++.|+. ...+.+
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEE
Confidence 37777765 2 4588999985431 0 01111100111111233333 33667777774 346889
Q ss_pred EEcCCCcee
Q 016457 242 WDWKDGQNV 250 (389)
Q Consensus 242 ~d~~~~~~~ 250 (389)
||+.+.+-.
T Consensus 631 yd~~t~~W~ 639 (695)
T 2zwa_A 631 LDPLSETLT 639 (695)
T ss_dssp EETTTTEEE
T ss_pred EECCCCeEE
Confidence 998876543
No 343
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.87 E-value=1.6 Score=37.15 Aligned_cols=147 Identities=10% Similarity=0.084 Sum_probs=79.8
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEE-------cCCCCeEEEEEeCC---CCeEEEeecC------
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVT-------AGSQEIFCFSFGGS---TDYLLAAGCG------ 145 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~~~~d------ 145 (389)
....|+|.|++ ..|+.+...|.|++++.. +.....+. ........++++|+ ++.++++...
T Consensus 19 ~P~~i~~~pdG--~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDN--HGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTT--CCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCC--CEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 45789999998 525566678999999853 33211111 12356789999986 6777766431
Q ss_pred --CeEEEEECcCC--c--eeeee----ee--cccCCeeEEEEecCCCCeEEEEeC-------------CCcEEEEecCCC
Q 016457 146 --SQIQFWDWRNK--K--QVACL----EE--SHVEDVTQVHFVPNNQNKVVSASV-------------DGLICTFDTGGD 200 (389)
Q Consensus 146 --~~i~iwd~~~~--~--~~~~~----~~--~~~~~v~~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~ 200 (389)
..|..|++... . ....+ .. ........|+|.|+|. ++++.+. .|.|.-++....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 25666665432 1 11111 10 0111245799999994 6555443 246777776632
Q ss_pred CCCCc--------cceeeeccCCceeeEEEecCCCcEEEE
Q 016457 201 INDDD--------LLESVINVGTSVGKVGFFGETNKHLWC 232 (389)
Q Consensus 201 ~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~l~~ 232 (389)
..... ....+..--.....++|.+..+.++++
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 11111 111111112346789998535654443
No 344
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.65 E-value=2.4 Score=38.21 Aligned_cols=194 Identities=7% Similarity=0.066 Sum_probs=109.7
Q ss_pred CCCeEEEEec-CCeEEEEeCCCceeeeeec-CCCCcEEEEEEe--CCCCCCEEEEEec-------CCeE---------EE
Q 016457 49 DWSLMAVSLS-TNVVKLYSPVTGQYSGECK-GHSSTVNQISFS--GPSTPHVLHSCSS-------DGTI---------RA 108 (389)
Q Consensus 49 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~-~~~~~v~~i~~~--~~~~~~~l~s~~~-------dg~i---------~i 108 (389)
||++|++-.. +..|-..+++..++-+.+. .....+..++|. |+. .+++.++. ||.. .+
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T--~yv~~~~e~~~P~pndg~~~~~~~~~~y~~ 218 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHT--KYVFANAEFIIPHPNDGKVFDLQDENSYTM 218 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBC--CEEEEEECSCEESSCSSSCCCTTSTTEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCc--cEEEecceeeccCCCCCcccccCChhhceE
Confidence 6778887764 5677777777766544433 245678888886 455 57777664 2221 11
Q ss_pred ---EEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecC---------------CeEEEEECcC-------Cc------
Q 016457 109 ---WDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCG---------------SQIQFWDWRN-------KK------ 157 (389)
Q Consensus 109 ---wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------~~i~iwd~~~-------~~------ 157 (389)
.|..+.+....+.. ......+...+++++.++.+.+ ..+.+++++. ++
T Consensus 219 f~~iD~~tm~v~~Qv~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 219 YNAIDAETMEMAFQVIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEEETTTCSEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEEcCCccEEEEEEEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 12223333333222 1233344556667777766542 1355555421 00
Q ss_pred -eeeeeee--------------cccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCC--------CCCccceeeeccC
Q 016457 158 -QVACLEE--------------SHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDI--------NDDDLLESVINVG 214 (389)
Q Consensus 158 -~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~~~~ 214 (389)
-+..+.. .-......+..+|+|+..+++|-.+.++.++|++.-. .....+.......
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 0111110 1234456688999998556666678999999998321 0111112222234
Q ss_pred CceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 215 TSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 215 ~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
-.....+|. ++|....+.--|..|.-|++..
T Consensus 378 lGPlHt~Fd-~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFD-GRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEEC-SSSEEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEEC-CCCceEeeeeecceEEEEeccH
Confidence 566788998 5676666667899999999864
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.26 E-value=1.9 Score=35.34 Aligned_cols=223 Identities=11% Similarity=-0.037 Sum_probs=115.5
Q ss_pred cceEEEeecCCCCeEEEEecCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLSTNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW 118 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 118 (389)
..|..++..... .++. . ||.|..|-....-.+..-......|..|+..... .++. . ||.|..|-....-.+.
T Consensus 24 ~~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h---s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH---SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE---EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE---EEEE-E-CCEEEEeeCCCCCCCC
Confidence 356666655432 2333 4 8889988654321111111123367777765433 4444 4 8999999755321111
Q ss_pred EEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 119 SVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 119 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.-..-...|..++.. ....++-. +|.|+.|-....-.+..-. .....|..++.... ..+.-. ||.|+.|-..
T Consensus 96 ~P~~~~~~v~~ia~G--~~hs~al~-~G~v~~wG~n~~gqlg~~~-~~~~~i~~i~~G~~---~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 96 VPAEARSGVDAIAAG--AWASYALK-DGKVIAWGDDSDGQTTVPA-EAQSGVTALDGGVY---TALAVK-NGGVIAWGDN 167 (282)
T ss_dssp CCGGGSSSEEEEEEE--TTEEEEEE-TTEEEEEECCTTSTTSCCG-GGGSSEEEEEECSS---EEEEEE-TTEEEEEECC
T ss_pred CCcccCCCeEEEECc--CCEEEEEe-CCeEEEecCCCCCcCCCCc-cCCCCeEEEEcccC---EEEEEE-CCEEEEecCC
Confidence 000013468888876 33444445 8999999765432222111 23355777766554 223334 7999999876
Q ss_pred CCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCceeeeccc
Q 016457 199 GDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYP 278 (389)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 278 (389)
.......+ ......|..++.- . ...++. .||.|+.|-......+-. .. . ....|..++..
T Consensus 168 ~~gqlg~p----~~~~~~v~~i~~G-~-~hs~al--~~G~v~~wG~n~~gqlg~-p~-~----------~~~~v~~i~~G 227 (282)
T 3qhy_B 168 YFGQTTVP----AEAQSGVDDVAGG-I-FHSLAL--KDGKVIAWGDNRYKQTTV-PT-E----------ALSGVSAIASG 227 (282)
T ss_dssp TTSTTSCC----GGGGSSEEEEEEC-S-SEEEEE--ETTEEEEEECCTTSTTCC-CG-G----------GGSSCCEEEEC
T ss_pred CCCCCCCc----eecCCCeEEEEec-C-CEEEEE--ECCeEEEEECCCCCCCCC-Cc-c----------cCCCceEEEcC
Confidence 43211111 1123467777664 2 233444 599999998654322210 00 0 11345555544
Q ss_pred CCCCeEEEEEecCCceEEEEEecc
Q 016457 279 GEGENLWVIGGTGAGTVGYFPVNY 302 (389)
Q Consensus 279 ~~~~~~~l~~g~~dg~i~i~~~~~ 302 (389)
... .++. . ||.|+.|-...
T Consensus 228 ~~h---~~al-~-~g~v~~wG~n~ 246 (282)
T 3qhy_B 228 EWY---SLAL-K-NGKVIAWGSSR 246 (282)
T ss_dssp SSC---EEEE-E-TTEEEEESTTC
T ss_pred CCE---EEEE-E-CCEEEEecCCC
Confidence 432 2222 3 89999996554
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.60 E-value=2.7 Score=34.82 Aligned_cols=142 Identities=6% Similarity=-0.011 Sum_probs=72.4
Q ss_pred EEeCCCCeEEEeecC--------------CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEEe----CCCcE
Q 016457 131 SFGGSTDYLLAAGCG--------------SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSAS----VDGLI 192 (389)
Q Consensus 131 ~~~~~~~~l~~~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----~d~~i 192 (389)
-+++.++.|+-+... ..|+..++...+. ..+. ... +..|++++. .|+-.. ....|
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~---~~~--~~~~s~~g~-~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLD---PDP--CIYASLIGN-YIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEE---CSC--EEEEEEETT-EEEEEEESSSSCEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEee---cCC--ccEEEEeCC-EEEEEeecCCCCceE
Confidence 446678888777652 3577777765542 2332 111 236777775 666554 34456
Q ss_pred EEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeecccccccCCccCCCCCce
Q 016457 193 CTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLASDSWTLDDVDYF 272 (389)
Q Consensus 193 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 272 (389)
+..++.+. ....+..+.. .++++..+.+.++......|..-++..+.....+.+ ..
T Consensus 132 y~~~~dGs-----~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---------------~~ 187 (302)
T 3s25_A 132 YRIRIDGE-----EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---------------NC 187 (302)
T ss_dssp EEEETTSC-----CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---------------CE
T ss_pred EEEECCCC-----CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---------------Cc
Confidence 66666532 1233333322 233423334444444467888888876554433322 11
Q ss_pred eeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 273 VDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 273 ~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
. ..++|+++.++.........|..-++....
T Consensus 188 ~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 188 Y-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp E-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred c-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 1 235588884433222222456666666544
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.47 E-value=5.1 Score=37.70 Aligned_cols=149 Identities=10% Similarity=0.077 Sum_probs=76.9
Q ss_pred CEEEEEecC----CeEEEEEccCCeEEEEE-E-----cC--CCCeEEEEEeCCCCeEEEeecC------CeEEEEECcCC
Q 016457 95 HVLHSCSSD----GTIRAWDTRSFHEVWSV-T-----AG--SQEIFCFSFGGSTDYLLAAGCG------SQIQFWDWRNK 156 (389)
Q Consensus 95 ~~l~s~~~d----g~i~iwd~~~~~~~~~~-~-----~~--~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~ 156 (389)
.+++.|+.+ ..+.+||+.+.+-...- . .. ...-..+.+..++..++.||.+ ..+.+||..+.
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~ 478 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR 478 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC
Confidence 577777753 35788898877544322 1 11 1122233331134455555542 36889998875
Q ss_pred ce--eeeeeecccCCeeEEEEecCCCCeEEEEeCCC--cEEEEecCCCCCCCcccee---eeccCCceeeEEEecCCCcE
Q 016457 157 KQ--VACLEESHVEDVTQVHFVPNNQNKVVSASVDG--LICTFDTGGDINDDDLLES---VINVGTSVGKVGFFGETNKH 229 (389)
Q Consensus 157 ~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~ 229 (389)
+- +..+. ....-.+++...++. +++.|+.++ .+.+||..+.. ...+.. ..........+.+....+.+
T Consensus 479 ~W~~~~~~p--~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 479 EWSMIKSLS--HTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEI--FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp EEEECCCCS--BCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTE--EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred cEEECCCCC--CCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCc--eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 42 22222 111122333323554 888887654 68999998542 111111 11111122234555233667
Q ss_pred EEEEecC-------CcEEEEEcCCCc
Q 016457 230 LWCLTHI-------ETLSIWDWKDGQ 248 (389)
Q Consensus 230 l~~~~~d-------~~i~i~d~~~~~ 248 (389)
++.|+.+ +.+.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 7777652 468899988776
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.02 E-value=5.5 Score=34.32 Aligned_cols=190 Identities=11% Similarity=-0.000 Sum_probs=91.7
Q ss_pred CcceEEEeecC-CCCeEEEEecCC----eEEEEeCCCceeeeeec------C--------CCCcEEEEEEeCCC-CCCEE
Q 016457 38 DDYVFEIVPKN-DWSLMAVSLSTN----VVKLYSPVTGQYSGECK------G--------HSSTVNQISFSGPS-TPHVL 97 (389)
Q Consensus 38 ~~~v~~~~~~~-~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~------~--------~~~~v~~i~~~~~~-~~~~l 97 (389)
...|.+|++.| +...|.+++..| .|...+ +.|+.-..+. . ....|.++++.|.. . ..|
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~-~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEP-GTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTST-TCE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCC-CEE
Confidence 56799999998 334455555555 444432 3333222111 1 11357889998632 2 356
Q ss_pred EEEecCCeEEEEEccCCeEEEEEE-------------------cCCCCeEEEEEeCC-CCeEEEeecCCeEEEEECcCCc
Q 016457 98 HSCSSDGTIRAWDTRSFHEVWSVT-------------------AGSQEIFCFSFGGS-TDYLLAAGCGSQIQFWDWRNKK 157 (389)
Q Consensus 98 ~s~~~dg~i~iwd~~~~~~~~~~~-------------------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~ 157 (389)
..+...+.|...+- .++.-..+. .....+.+|.++|. .+.++++..++.|...+ ..++
T Consensus 132 ~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~ 209 (394)
T 3b7f_A 132 YAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGT 209 (394)
T ss_dssp EEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTS
T ss_pred EEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCC
Confidence 66666665544331 222111111 01235788999874 45677766555554432 2222
Q ss_pred eeeeeee---c-c--------cCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc--CCceeeEEEe
Q 016457 158 QVACLEE---S-H--------VEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV--GTSVGKVGFF 223 (389)
Q Consensus 158 ~~~~~~~---~-~--------~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~~i~~~~~~ 223 (389)
.-..+.. . + ...+.+|.++|..+..++.+...+ |...+-... ....+..-... ...+..+++.
T Consensus 210 tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~--tW~~~~~~l~~~~~~~~~~i~~~ 286 (394)
T 3b7f_A 210 DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREG--VWKRIGDAMPREVGDIGFPIVVH 286 (394)
T ss_dssp SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTT--EEECGGGGSCTTTCSCEEEEEEC
T ss_pred CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCC--cceECCCCCCCCCccceEEEEEC
Confidence 2222110 0 0 134889999997544777776544 544433211 11111110001 0234567776
Q ss_pred cCCCcEEEEEe
Q 016457 224 GETNKHLWCLT 234 (389)
Q Consensus 224 ~~~~~~l~~~~ 234 (389)
|.+...++++.
T Consensus 287 p~~~~~l~~~t 297 (394)
T 3b7f_A 287 QRDPRTVWVFP 297 (394)
T ss_dssp SSCTTCEEEEE
T ss_pred CCCCCEEEEEe
Confidence 54555565554
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=91.25 E-value=5.3 Score=32.64 Aligned_cols=185 Identities=11% Similarity=-0.014 Sum_probs=97.4
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCceee
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQVA 160 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 160 (389)
..|..|+..... .++. . ||.|..|-....-.+..-......|..++.. ....++. . ||.|..|-....-.+.
T Consensus 24 ~~i~~ia~G~~h---~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G-~~hs~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGGYFH---GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG-NYHSLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEECSSE---EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEEC-SSEEEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeCCCe---EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeC-CCEEEEE-E-CCEEEEeeCCCCCCCC
Confidence 357777765432 4444 4 8999999755322111000113467777775 2333333 4 8999999765432221
Q ss_pred eeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEE
Q 016457 161 CLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLS 240 (389)
Q Consensus 161 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~ 240 (389)
.-. .-...|..++.... ..+.-. +|.|+.|-.........+ ......|..++.- .. +.+.-. ||.|.
T Consensus 96 ~P~-~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~~----~~~~~~i~~i~~G-~~--~~~~l~-~G~v~ 162 (282)
T 3qhy_B 96 VPA-EARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTVP----AEAQSGVTALDGG-VY--TALAVK-NGGVI 162 (282)
T ss_dssp CCG-GGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSCC----GGGGSSEEEEEEC-SS--EEEEEE-TTEEE
T ss_pred CCc-ccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCCC----ccCCCCeEEEEcc-cC--EEEEEE-CCEEE
Confidence 111 12346777877664 344445 999999987643211111 1123456677654 22 333334 79999
Q ss_pred EEEcCCCceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccC
Q 016457 241 IWDWKDGQNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYG 303 (389)
Q Consensus 241 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~ 303 (389)
.|-......+.. +. . -...|..++..... .++. .||.|+.|-....
T Consensus 163 ~wG~n~~gqlg~-p~-~----------~~~~v~~i~~G~~h---s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 163 AWGDNYFGQTTV-PA-E----------AQSGVDDVAGGIFH---SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp EEECCTTSTTSC-CG-G----------GGSSEEEEEECSSE---EEEE--ETTEEEEEECCTT
T ss_pred EecCCCCCCCCC-ce-e----------cCCCeEEEEecCCE---EEEE--ECCeEEEEECCCC
Confidence 997654322210 00 0 11446666554432 2333 5899999976543
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=89.57 E-value=7.4 Score=31.65 Aligned_cols=198 Identities=10% Similarity=0.011 Sum_probs=114.0
Q ss_pred CcceEEEeecCCCCeEEEEecCCeEEEEe---CCCceeeeeecCCCCcEEEEEEeC--CCCCCEEEEEecCCeEEEEEcc
Q 016457 38 DDYVFEIVPKNDWSLMAVSLSTNVVKLYS---PVTGQYSGECKGHSSTVNQISFSG--PSTPHVLHSCSSDGTIRAWDTR 112 (389)
Q Consensus 38 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~---~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~l~s~~~dg~i~iwd~~ 112 (389)
.+.+..+........|+.-+..|.++--. +..+.....+. ..+.|..+.- + +. .+++..+.+|.++-..+.
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~--~~~v~~T~~G~iKr~~l~ 98 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFG--NRLLLATKKGYVKKIPLA 98 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSC--SEEEEEETTSEEEEEEGG
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCC--CEEEEEeCCCEEEEEEHH
Confidence 45566665555555676677788766543 33221111133 3556666644 3 23 689999999999998876
Q ss_pred CC------eEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCC---------ceeeeeeecccCCeeEEEEec
Q 016457 113 SF------HEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNK---------KQVACLEESHVEDVTQVHFVP 177 (389)
Q Consensus 113 ~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~ 177 (389)
.. .....++. .+.+..+........++..+..|.+..+....- .....+. ....|..+...+
T Consensus 99 ~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~--~~d~vv~~~~~~ 175 (276)
T 3no0_A 99 EFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE--KNDETSGLRIWN 175 (276)
T ss_dssp GTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEEEES
T ss_pred HhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC--CCCEEEEEEEeC
Confidence 43 22222333 355666655546678888888999888875421 1222333 345666666555
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCCC---CccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEE--EEcC
Q 016457 178 NNQNKVVSASVDGLICTFDTGGDIND---DDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSI--WDWK 245 (389)
Q Consensus 178 ~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i--~d~~ 245 (389)
++. .++..+..|.++...+..-... ..-+..+ ...+.+..+... .+.+.++..+.+|.+.. ++..
T Consensus 176 ~~~-~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~-~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 176 GEP-YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI-KEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SCS-EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE-SSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCC-EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe-CCCCEEEEEcCCCeEEEeeeCHH
Confidence 554 8888999999998887521110 0111111 223444444443 33445666677777666 6654
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.54 E-value=13 Score=36.48 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=33.3
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEc
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 122 (389)
.+.+++..++. .++++-+.|+++|+|++.+++++.+...
T Consensus 237 ~~~~~~~~~~~--~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTT--TEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCC--cEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 46777777776 6999999999999999999999887653
No 352
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.64 E-value=12 Score=32.97 Aligned_cols=104 Identities=13% Similarity=0.192 Sum_probs=61.4
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEE--EEEc------CCCCeEEEEEeCC---CCeEEEeecC----
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVW--SVTA------GSQEIFCFSFGGS---TDYLLAAGCG---- 145 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~l~~~~~d---- 145 (389)
.....|+|.|++ .++++-...+.|.+++..+++... .+.. .......|+|+|+ ++.|+++...
T Consensus 27 ~~P~~~a~~pdG--~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN--QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS--CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC--cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 356799999999 555554333478888765554322 2211 2456779999986 7777766531
Q ss_pred ---------CeEEEEECcCC-------ceee-eeeecccCCeeEEEEecCCCCeEEEEe
Q 016457 146 ---------SQIQFWDWRNK-------KQVA-CLEESHVEDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 146 ---------~~i~iwd~~~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~ 187 (389)
..|.-++.... +.+. .+..........|+|.|+|. ++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 34555554322 1121 12211123468899999995 666654
No 353
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=87.62 E-value=11 Score=31.43 Aligned_cols=156 Identities=9% Similarity=0.082 Sum_probs=94.0
Q ss_pred CcceEEEeecC---CCCeEEEEecCCeEEEEeCCCc-------eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEE
Q 016457 38 DDYVFEIVPKN---DWSLMAVSLSTNVVKLYSPVTG-------QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIR 107 (389)
Q Consensus 38 ~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~ 107 (389)
.+.|.++..-+ +..+++..+.+|.|+.-.+... .....+.. .+.+..+...... +.|+..+..|.+.
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~--d~ill~T~~G~~~ 170 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG--DDLLLVSANGQSI 170 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT--CEEEEEETTSEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC--CEEEEEECCCeEE
Confidence 44565554333 4678999999999999876542 22223443 3445555555444 5788888899887
Q ss_pred EEEcc--C---------CeEEEEEEcCCCCeEEEEEeCCCCeEEEeecCCeEEEEECcCCce-------eeeeee-cccC
Q 016457 108 AWDTR--S---------FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGCGSQIQFWDWRNKKQ-------VACLEE-SHVE 168 (389)
Q Consensus 108 iwd~~--~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-------~~~~~~-~~~~ 168 (389)
.+.+. . |.....+.. ...|.++...+.+..++..+..|.++.-.+..... +..+.. ....
T Consensus 171 rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d 249 (327)
T 3uc1_A 171 RFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRG 249 (327)
T ss_dssp EEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTC
T ss_pred EEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCC
Confidence 77765 2 122122222 45677776665677899999999999887653221 222221 1133
Q ss_pred CeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 169 DVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.+..+...... ..++..+.+|.+..++..
T Consensus 250 ~lv~~~~~~~~-~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 250 RLVGALIVDDD-SELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp SEEEEEEECTT-CEEEEEEGGGCEEEEEGG
T ss_pred eEEEEEEeCCC-ccEEEEcCCCeEEEEehh
Confidence 45444444434 367777888888888765
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=87.05 E-value=14 Score=31.75 Aligned_cols=143 Identities=12% Similarity=0.027 Sum_probs=71.2
Q ss_pred ceEEEeecCC--CCeEEEEecCCeEEEEeCCCceeeeeec-------------------CCCCcEEEEEEeCCCCCCEEE
Q 016457 40 YVFEIVPKND--WSLMAVSLSTNVVKLYSPVTGQYSGECK-------------------GHSSTVNQISFSGPSTPHVLH 98 (389)
Q Consensus 40 ~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~-------------------~~~~~v~~i~~~~~~~~~~l~ 98 (389)
.|.++++.|. ...|.+++..+.|...+ +.|+.-..+. .....+.+|.+.|... ..|+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~-~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDP-KHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCT-TCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCC-CEEE
Confidence 5778888872 45666666666665553 2232222211 1224688999987432 3455
Q ss_pred EEecCCeEEEEEccCCeEEEEEEcC-------------CCCeEEEEEeCCC-CeEEEeecCCeEEEEECcCCceeeeeee
Q 016457 99 SCSSDGTIRAWDTRSFHEVWSVTAG-------------SQEIFCFSFGGST-DYLLAAGCGSQIQFWDWRNKKQVACLEE 164 (389)
Q Consensus 99 s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 164 (389)
.+..++.|...+ ..++.-..+... ...+.++.++|.+ +.++++.. +.|...+ ..++.-..+..
T Consensus 194 vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-~gl~~s~-D~G~tW~~~~~ 270 (394)
T 3b7f_A 194 IGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-CGIYRMD-RREGVWKRIGD 270 (394)
T ss_dssp EEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-TEEEEEE-TTTTEEECGGG
T ss_pred EEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-CeEEEeC-CCCCcceECCC
Confidence 555444443332 222221111110 1248899998764 56666654 4454443 12332222221
Q ss_pred cc-c---CCeeEEEEecCCCCeEEEEe
Q 016457 165 SH-V---EDVTQVHFVPNNQNKVVSAS 187 (389)
Q Consensus 165 ~~-~---~~v~~~~~~~~~~~~l~~~~ 187 (389)
.. . ..+.+++++|..+..+.++.
T Consensus 271 ~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 271 AMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp GSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCCCCccceEEEEECCCCCCEEEEEe
Confidence 01 1 33567888875444565554
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.83 E-value=12 Score=30.86 Aligned_cols=214 Identities=6% Similarity=0.022 Sum_probs=109.2
Q ss_pred cCCCCeEEEEe--cCCeEEEEeCCCceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecC--------------CeEEEEE
Q 016457 47 KNDWSLMAVSL--STNVVKLYSPVTGQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSD--------------GTIRAWD 110 (389)
Q Consensus 47 ~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~d--------------g~i~iwd 110 (389)
+.++..|+... .++.|...+.+ |.....+.. ..+ --+++++ ..|+-+... ..|+..+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~--~~~--~~i~~~g--~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSN--DTA--MYINADK--NYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEE--EEE--EEEEECS--SEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccC--Cce--eeEEEcC--CEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 34666666654 25666666654 333333332 122 3446677 566655432 3567777
Q ss_pred ccCCeEEEEEEcCCCCeEEEEEeCCCCeEEEee----cCCeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEEE
Q 016457 111 TRSFHEVWSVTAGSQEIFCFSFGGSTDYLLAAG----CGSQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVSA 186 (389)
Q Consensus 111 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 186 (389)
+...+.. .+.. ... ..|++.++.|+-+. ....|...++. +.....+. .+.. ..++++++.++.+.
T Consensus 95 ~dg~~~~-~l~~--~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt-~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 95 RNGHGST-VLDP--DPC--IYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIK-NHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp TTSCCCE-EEEC--SCE--EEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEE-SSCC----CCSEEETTEEEEEC
T ss_pred CCCCcce-Eeec--CCc--cEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEe-CCCc----eEeeEECCEEEEEe
Confidence 7655432 2322 222 25666788888776 24456666665 33344454 2322 45677786344444
Q ss_pred eCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecC--CcEEEEEcCCCceeEEeecccccccCCc
Q 016457 187 SVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHI--ETLSIWDWKDGQNVASFENARSLASDSW 264 (389)
Q Consensus 187 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 264 (389)
.....|...++.++. ...+.. .... ..+. |++.+|+-.... ..|..-++.... ...+..
T Consensus 164 ~g~~~Iy~~~l~g~~-----~~~l~~--~~~~-~~~~-P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--------- 224 (302)
T 3s25_A 164 PKNGQLYRYDTASQS-----EALFYD--CNCY-KPVV-LDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--------- 224 (302)
T ss_dssp TTTCCEEEEETTTTE-----EEEEEC--SCEE-EEEE-EETTEEEEEEGGGTTEEEEECSSSCC-CEECSC---------
T ss_pred CCCceEEEEECCCCC-----EEEEeC--CCcc-ceee-ecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC---------
Confidence 336778888887432 112211 2222 2355 444455544433 255555554333 333332
Q ss_pred cCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCC
Q 016457 265 TLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGG 304 (389)
Q Consensus 265 ~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~ 304 (389)
..+ ..|+|+++.+|.++....+.|..-++....
T Consensus 225 -----~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 225 -----ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp -----SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred -----CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 222 237888885543333344677777776544
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.29 E-value=21 Score=35.02 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=32.3
Q ss_pred ceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeec
Q 016457 216 SVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 216 ~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 255 (389)
.+.+++.. ++..++++-+.|+++++|++.+++++.+..-
T Consensus 237 ~~~~~~~~-~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEE-TTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeec-CCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 45566666 6677999999999999999999999988653
No 357
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.31 E-value=26 Score=30.98 Aligned_cols=104 Identities=12% Similarity=0.056 Sum_probs=62.5
Q ss_pred cceEEEeecCCCC-eEEEEecCCeEEEEeCCCce---eeeeec---------CCCCcEEEEEEeCC----CCCCEEEEEe
Q 016457 39 DYVFEIVPKNDWS-LMAVSLSTNVVKLYSPVTGQ---YSGECK---------GHSSTVNQISFSGP----STPHVLHSCS 101 (389)
Q Consensus 39 ~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~---~~~~~~---------~~~~~v~~i~~~~~----~~~~~l~s~~ 101 (389)
.....|+|.|++. .|+++...|.|++++..... .+..+. ........|+|+|+ + .+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~--~lYv~yt 91 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG--KLYVSYT 91 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC--EEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC--EEEEEEe
Confidence 4567999999996 56667789999999754221 122111 11456889999996 3 3444333
Q ss_pred cC------------CeEEEEEccC----------CeEEEEEE--cCCCCeEEEEEeCCCCeEEEeec
Q 016457 102 SD------------GTIRAWDTRS----------FHEVWSVT--AGSQEIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 102 ~d------------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 144 (389)
.+ ..|.-|.+.. .+.+..+. .....-..|+|.|++...++.|.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 21 1344455432 23444443 12456788999998877777665
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=82.06 E-value=21 Score=29.80 Aligned_cols=228 Identities=11% Similarity=0.012 Sum_probs=126.2
Q ss_pred CCccccCCCCeEEEEecCc---------eee--eeecCcceEEEeecCCCCeEEEEecCCeEEEEe---CCC------ce
Q 016457 12 PKSQSCDNVNSIKRFGLKN---------SIQ--TNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYS---PVT------GQ 71 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~---------~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~---~~~------~~ 71 (389)
|..-+.+.+|.|+--.+.. -.. .+...+.+..+........|+.-+..|.++-.. +.. |.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 3344566777777665321 111 122255566665555556666666778766554 332 33
Q ss_pred eeee---ecCCCCcEEEEEEeCC-CCCCEEEEEecCCeEEEEEccCCe-------EEEEEEcCCCCeEEEEEeCCCCeEE
Q 016457 72 YSGE---CKGHSSTVNQISFSGP-STPHVLHSCSSDGTIRAWDTRSFH-------EVWSVTAGSQEIFCFSFGGSTDYLL 140 (389)
Q Consensus 72 ~~~~---~~~~~~~v~~i~~~~~-~~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~ 140 (389)
++.. +. ..+.|.++...++ ....+++.++.+|.++--.+.... ....++. .+.+..+........++
T Consensus 84 ~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 84 HVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 3222 22 3455666544432 111699999999999988875422 2223333 35565555554667888
Q ss_pred EeecCCeEEEEECc--CC---------ceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCC---cc
Q 016457 141 AAGCGSQIQFWDWR--NK---------KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDD---DL 206 (389)
Q Consensus 141 ~~~~d~~i~iwd~~--~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~ 206 (389)
..+..|.+..+... .- .....+. ....|.++...+.+. .++..+..|.++.-.+..-.... .-
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~--~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G 238 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN--IDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKG 238 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC--TTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC--CCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCc
Confidence 88888998888765 21 1122232 345677776666554 88999999999988765211000 00
Q ss_pred c--eeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 207 L--ESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 207 ~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
+ ..+......+..+... .+...++..+.+|.+..++..
T Consensus 239 ~~~~~l~~~~d~lv~~~~~-~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 239 VLTVMYDRRRGRLVGALIV-DDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EESSCCCTTTCSEEEEEEE-CTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEecCCCCeEEEEEEe-CCCccEEEEcCCCeEEEEehh
Confidence 1 1111112344444444 334456667777777666654
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=80.79 E-value=38 Score=31.91 Aligned_cols=241 Identities=6% Similarity=-0.018 Sum_probs=124.5
Q ss_pred eEEEe-ecCCCCeEEEEecCC-----eEEEEeCCCceeeee-ecC-CCC------cEEEEEEeCCCCCCEEEEEe-----
Q 016457 41 VFEIV-PKNDWSLMAVSLSTN-----VVKLYSPVTGQYSGE-CKG-HSS------TVNQISFSGPSTPHVLHSCS----- 101 (389)
Q Consensus 41 v~~~~-~~~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~-~~~-~~~------~v~~i~~~~~~~~~~l~s~~----- 101 (389)
...+. ++|++++++.+-+.| .++++|+.+++.+.. +.. -+. ....++|..++ .++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~--~~~~~~~~~~~~ 208 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD--TIIFNLVLHKNE 208 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT--EEEECCCCSTTC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC--EEEEEeCCCCCC
Confidence 34455 899999888775533 799999999987642 220 000 12345787443 3444321
Q ss_pred -----cCCeEEEEEccCC--eEEEEEEcCCCCe-EEEEEeCCCCe-----EEEeec---CCeEEEEECcC--Cceeeeee
Q 016457 102 -----SDGTIRAWDTRSF--HEVWSVTAGSQEI-FCFSFGGSTDY-----LLAAGC---GSQIQFWDWRN--KKQVACLE 163 (389)
Q Consensus 102 -----~dg~i~iwd~~~~--~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---d~~i~iwd~~~--~~~~~~~~ 163 (389)
....|+.|.+-+. +-...+......+ .+...+++++. +++.+. ...+.+.|... ++ +..+.
T Consensus 209 ~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~ 287 (711)
T 4hvt_A 209 ITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKIN 287 (711)
T ss_dssp BCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECC
T ss_pred cCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEee
Confidence 1246888887654 2334455543333 23444555553 333332 34567777653 32 22232
Q ss_pred ecccCCeeEEEEecCCCCeEEEE----------eCCCcEEEEecCCCCCC---Cccceeeec--cCCceeeEEEecCCCc
Q 016457 164 ESHVEDVTQVHFVPNNQNKVVSA----------SVDGLICTFDTGGDIND---DDLLESVIN--VGTSVGKVGFFGETNK 228 (389)
Q Consensus 164 ~~~~~~v~~~~~~~~~~~~l~~~----------~~d~~i~i~d~~~~~~~---~~~~~~~~~--~~~~i~~~~~~~~~~~ 228 (389)
..... .+..+..+. +++.. ...+.|...|+.+.... ......+.. ....+..+.+. .+ .
T Consensus 288 ~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~ 361 (711)
T 4hvt_A 288 MPSDA---TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTT-KD-R 361 (711)
T ss_dssp SCTTC---EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEEC-SS-C
T ss_pred cCCcc---eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEE-CC-E
Confidence 11111 223344442 44422 24677999998753210 111222222 33467788887 33 5
Q ss_pred EEEEEecCC--cEEEEEcCCCc-eeEE-eecccccccCCccCCCCCceeeecccCCCCeEEEEEecCC--ceEEEEEec
Q 016457 229 HLWCLTHIE--TLSIWDWKDGQ-NVAS-FENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTGA--GTVGYFPVN 301 (389)
Q Consensus 229 ~l~~~~~d~--~i~i~d~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~d--g~i~i~~~~ 301 (389)
++++...++ .|.++++.+++ .... +... ....+.....+++++.+++...+.. +.++.+|+.
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-----------~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLP-----------YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCC-----------STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCC-----------CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 677777776 56777766554 2222 2110 1134555566677766544444333 567777765
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.10 E-value=31 Score=30.48 Aligned_cols=112 Identities=10% Similarity=0.110 Sum_probs=60.8
Q ss_pred CCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceee---e------ccCCceeeEEEecC---CCcEEEEEec
Q 016457 168 EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESV---I------NVGTSVGKVGFFGE---TNKHLWCLTH 235 (389)
Q Consensus 168 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~------~~~~~i~~~~~~~~---~~~~l~~~~~ 235 (389)
.....|+|.|++...|+++...|.|++++..... ....+..+ . ..+.....|+++|. ++.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~-~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEI-FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCB-CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCe-eeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4467899999983256677789999999765321 11111111 1 11456788999843 2444444332
Q ss_pred C------------CcEEEEEcCCC----------ceeEEeecccccccCCccCCCCCceeeecccCCCCeEEEEEecC
Q 016457 236 I------------ETLSIWDWKDG----------QNVASFENARSLASDSWTLDDVDYFVDCHYPGEGENLWVIGGTG 291 (389)
Q Consensus 236 d------------~~i~i~d~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~ 291 (389)
+ ..|.-|.+..+ +.+..+.... ....-..+.|.|||. +|+.+|+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~----------~~H~g~~l~fgpDG~-LYv~~Gd~ 159 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH----------RKHLGGQLLFGPDGF-LYIILGDG 159 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS----------SSSCEEEEEECTTSC-EEEEECCT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC----------CcccCCcEeECCCCc-EEEEeCCC
Confidence 1 14545665421 1222221100 113457899999984 67777653
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=75.36 E-value=38 Score=28.96 Aligned_cols=139 Identities=10% Similarity=0.101 Sum_probs=81.9
Q ss_pred eEEEEEccCC--eEEEEEEcC------CCCeEEEEEe---CC----CCeEEEeec-CCeEEEEECcCCceeeeee-----
Q 016457 105 TIRAWDTRSF--HEVWSVTAG------SQEIFCFSFG---GS----TDYLLAAGC-GSQIQFWDWRNKKQVACLE----- 163 (389)
Q Consensus 105 ~i~iwd~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~l~~~~~-d~~i~iwd~~~~~~~~~~~----- 163 (389)
.|.+||+.+. +.++.+... .+.+..+++. |. +...+.+.. .+.|.++|+.+++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5889999999 999888764 3457888887 22 334444443 6889999999876543321
Q ss_pred e--------cc----cCCeeEEEEecC----CCCeEEEEeCCC-cEEEEec---CCCCCCCccceeeeccC---CceeeE
Q 016457 164 E--------SH----VEDVTQVHFVPN----NQNKVVSASVDG-LICTFDT---GGDINDDDLLESVINVG---TSVGKV 220 (389)
Q Consensus 164 ~--------~~----~~~v~~~~~~~~----~~~~l~~~~~d~-~i~i~d~---~~~~~~~~~~~~~~~~~---~~i~~~ 220 (389)
. +. ...+..|+++|+ ++ .|.-....+ .++-... +... ....+.. .+.. ..-..+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~-~LYf~plss~~ly~V~T~~L~~~~-~~~~v~~-~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNR-PAYYLAGSAIKVYSVNTKELKQKG-GKLNPEL-LGNRGKYNDAIAL 280 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCC-EEEEEESSCSEEEEEEHHHHSSTT-CCCCCEE-EEECCTTCCEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCe-EEEEEECCCCcEEEEEHHHhhCcc-hhhceEE-eeecCCCCCcceE
Confidence 0 00 235778888887 54 444444333 3443332 2111 1112222 2222 222344
Q ss_pred EEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 221 GFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 221 ~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
++.+.+|.++++--..+.|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 55445677777777888999999875
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.71 E-value=23 Score=35.59 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=31.9
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEc
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 122 (389)
.+.+++..++. .++++-+.|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~--~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTT--TEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCc--cEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 34555666666 6999999999999999999999988664
No 363
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.96 E-value=25 Score=35.35 Aligned_cols=39 Identities=23% Similarity=0.194 Sum_probs=32.1
Q ss_pred ceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeec
Q 016457 216 SVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 216 ~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 255 (389)
.+.+++.. ++..++++-+.|+++++|++.+++++.+..-
T Consensus 239 ~~vs~~~~-~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFL-STYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEE-TTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeecc-CCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 44555665 6678999999999999999999999988663
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.11 E-value=66 Score=30.22 Aligned_cols=29 Identities=24% Similarity=0.379 Sum_probs=26.2
Q ss_pred CcEEEEEecCCcEEEEEcCCCceeEEeec
Q 016457 227 NKHLWCLTHIETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 227 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 255 (389)
..++++-+.|.++|+|++.+++++.+..-
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 56999999999999999999998888765
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.84 E-value=69 Score=30.10 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=30.0
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEc
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTA 122 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 122 (389)
.|.++.+. . .++++-+.|.++|+|++.+++++.+...
T Consensus 223 ~Is~~~~~--~--~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFH--E--RYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEET--T--TEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccC--C--cEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 35555542 3 5999999999999999999999888776
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.13 E-value=47 Score=30.42 Aligned_cols=60 Identities=12% Similarity=0.082 Sum_probs=42.5
Q ss_pred cEEEEEEeCCCCCCEEEEEecC------------CeEEEEEccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEee
Q 016457 82 TVNQISFSGPSTPHVLHSCSSD------------GTIRAWDTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAG 143 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 143 (389)
..-.|+|.|.+ .+++.-..+ ..+.+.+..+++..+.+..+ ..+++.++|+|+++.|++.-
T Consensus 477 ~PDNL~fd~~G--~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 477 SPDGLGFDKAG--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTC--CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCcceEECCCC--CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 34678999998 555543322 23555666777777666665 68899999999998888764
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=59.87 E-value=72 Score=26.24 Aligned_cols=225 Identities=10% Similarity=0.023 Sum_probs=121.0
Q ss_pred CccccCCCCeEEEEecCce---------ee--eeecCcceEEEeecCCCCeEEEEecCCeEEEEeC---C------Ccee
Q 016457 13 KSQSCDNVNSIKRFGLKNS---------IQ--TNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSP---V------TGQY 72 (389)
Q Consensus 13 ~~~s~~~~~~i~~w~~~~~---------~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~------~~~~ 72 (389)
..-+.+.+|.|+--.+... +. .+...+.+..+........|+..+..|.++-+.. . .|.+
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~ 84 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRP 84 (307)
T ss_dssp EEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeE
Confidence 3445677888877665321 11 1222455555555555566777777887666543 2 2332
Q ss_pred ee---eecCCCCcEEEEEEeC---CCCCCEEEEEecCCeEEEEEccC-------CeEEEEEEcCCCCeEEEEEeCCCCeE
Q 016457 73 SG---ECKGHSSTVNQISFSG---PSTPHVLHSCSSDGTIRAWDTRS-------FHEVWSVTAGSQEIFCFSFGGSTDYL 139 (389)
Q Consensus 73 ~~---~~~~~~~~v~~i~~~~---~~~~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l 139 (389)
+. .+. ..+.|.++...+ ++ .+++..+.+|.++--.+.. +.....+..+ +.+..+........+
T Consensus 85 i~~~l~l~-~~e~i~~~~~~~~~~~~--~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 85 IVNLLPLE-QDERITAILPVTEFEEG--VKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEV 160 (307)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCCCTT--CEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEE
T ss_pred hhhccCCC-CCCEEEEEEEeccCCCC--cEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEE
Confidence 22 122 344566664432 23 5799999999999887652 2122223333 556665555466778
Q ss_pred EEeecCCeEEEEECcCCc---------eeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC-----Cc
Q 016457 140 LAAGCGSQIQFWDWRNKK---------QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND-----DD 205 (389)
Q Consensus 140 ~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~ 205 (389)
+..+.+|.+..+....-. ....+. ....|.++...+++. .+++.+..|.++-.++..-... ..
T Consensus 161 ~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~--~~d~Vv~~~~~~~~~-~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~ 237 (307)
T 1zi0_A 161 MLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG--EGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKGV 237 (307)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC--TTCCEEEEECCCSSC-EEEEEETTSEEEEECGGGSCCCCTTSCCE
T ss_pred EEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC--CCCEEEEEEEecCCC-EEEEEEcCCceEEEEHHHhccCCCCCCCE
Confidence 888888988888764321 112232 345676766555553 7888899999998887421100 00
Q ss_pred cceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 206 LLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 206 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
....+....+.+..+... .+...++..+.+|.+.-++..
T Consensus 238 ~~~~~~~~~~~lv~~~~v-~~~~~l~~~t~~g~~ir~~~~ 276 (307)
T 1zi0_A 238 ISIKVTERNGLVVGAVQV-DDCDQIMMITDAGTLVRTRVS 276 (307)
T ss_dssp ESSCCCTTTCSEEEEEEE-CTTCEEEEEESSCCEEEEEGG
T ss_pred EeeEecCCCCeEEEEEEe-CCCceEEEEcCCCcEEEEecc
Confidence 111122222444444443 223445566666666555544
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=58.78 E-value=78 Score=26.30 Aligned_cols=185 Identities=8% Similarity=0.056 Sum_probs=106.9
Q ss_pred CCccccCCCCeEEEEecCc------eeeeeecCcceEEEeecCCCCeEEEEecCCeEEEEeCC---------Cceeeee-
Q 016457 12 PKSQSCDNVNSIKRFGLKN------SIQTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPV---------TGQYSGE- 75 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~~~~~~~- 75 (389)
+..-+.+.+|.|+--.+.. ....+...+.+..+........|+..+..|.++-+... .|.++..
T Consensus 6 ~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~ 85 (323)
T 1wp5_A 6 DVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANI 85 (323)
T ss_dssp EEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGT
T ss_pred cEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhc
Confidence 3345677788888766431 11123335666666655556677777788886666542 2332222
Q ss_pred --ecCCCCcEEEEEEeCC-CCCCEEEEEecCCeEEEEEccC--------CeEEEEEEcCCCCeEEEEEeCCCCeEEEeec
Q 016457 76 --CKGHSSTVNQISFSGP-STPHVLHSCSSDGTIRAWDTRS--------FHEVWSVTAGSQEIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 76 --~~~~~~~v~~i~~~~~-~~~~~l~s~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 144 (389)
+. ..+.|.++...++ ....+++.++.+|.++--.+.. +.....+.. .+.+..+.....+..++..+.
T Consensus 86 i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~ 163 (323)
T 1wp5_A 86 IPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTH 163 (323)
T ss_dssp SCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEET
T ss_pred cCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeC
Confidence 22 2345665543332 1115799999999999988752 222222333 356666555546677888888
Q ss_pred CCeEEEEECcCCce-------eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 145 GSQIQFWDWRNKKQ-------VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 145 d~~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
+|.+..+....-.. +.-+.......|.++...+++...+++.+..|..+..++.
T Consensus 164 ~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 164 NGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp TSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 89988887653211 1112112345566665544432268888889998887775
No 369
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=56.56 E-value=93 Score=26.51 Aligned_cols=156 Identities=16% Similarity=0.121 Sum_probs=82.2
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC--------eEE---EEEEc-CCCCeEEEEEeCCCCeEEEeecCCeEE
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF--------HEV---WSVTA-GSQEIFCFSFGGSTDYLLAAGCGSQIQ 149 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~---~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~ 149 (389)
.|..|+-. . ...+.-..||.|..|-.... ... ..+.. ....+..++++......++-..||.|+
T Consensus 54 ~i~~i~~G--~--~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~ 129 (389)
T 3kci_A 54 RPVQLIGG--E--QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 129 (389)
T ss_dssp CEEEEEEE--T--TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEE
T ss_pred ceEEEEeC--C--CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEE
Confidence 34455543 2 35566677899999864321 111 11111 123455566664566777777899999
Q ss_pred EEECcCCce-----------eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCC----CCc---cceeee
Q 016457 150 FWDWRNKKQ-----------VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN----DDD---LLESVI 211 (389)
Q Consensus 150 iwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~---~~~~~~ 211 (389)
.|-....-. ...+.......|..|+... ...++...+|.|+.|-...... ... ....+.
T Consensus 130 ~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~ 206 (389)
T 3kci_A 130 SWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG---AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 206 (389)
T ss_dssp EEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS---SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG
T ss_pred EEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc---CeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEec
Confidence 996532110 1111101123566666543 3566667799999997652110 000 001111
Q ss_pred c-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 212 N-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 212 ~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
. ....|..++.. ....+.++...+|.|..|-..
T Consensus 207 ~~~~~~v~~ia~G-~g~~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 207 ALQGHRVVDIACG-SGDAQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp GGTTSCEEEEEEC-CSSCEEEEEETTTEEEEEECC
T ss_pred ccCCCeEEEEEEc-CCCcEEEEEccCCEEEEEeCC
Confidence 1 12345666653 223466777889999999754
No 370
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=53.13 E-value=1.6e+02 Score=28.15 Aligned_cols=152 Identities=9% Similarity=0.011 Sum_probs=77.2
Q ss_pred CcceEEEeecCCC-CeEEEEecCCeEEEEeCCCceeeeeecC-------CCCcEEEEEEeCCCCCCEEEEEecCCe----
Q 016457 38 DDYVFEIVPKNDW-SLMAVSLSTNVVKLYSPVTGQYSGECKG-------HSSTVNQISFSGPSTPHVLHSCSSDGT---- 105 (389)
Q Consensus 38 ~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~-------~~~~v~~i~~~~~~~~~~l~s~~~dg~---- 105 (389)
...|.+|+++|.. ..+++++..+.|...+ +.|+.-..+.. ....|.+|++.|... ..++.+..+..
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~-~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP-DRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE-EEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCC-CEEEEEeCccCCCcc
Confidence 5689999999864 5667777667665554 33433222222 124699999998542 34444432211
Q ss_pred EEEEEcc-CCeEEEEEEcC---------CCCeEEEEEeCCCC-eEEEeecCCeEEEEECc-CCceeeeeee-----cccC
Q 016457 106 IRAWDTR-SFHEVWSVTAG---------SQEIFCFSFGGSTD-YLLAAGCGSQIQFWDWR-NKKQVACLEE-----SHVE 168 (389)
Q Consensus 106 i~iwd~~-~~~~~~~~~~~---------~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~-~~~~~~~~~~-----~~~~ 168 (389)
-.||.-. .++-=..+... ...+..++++|.+. .++++...+.| |-.. .++.-..+.. ....
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCC
Confidence 2344333 33322222211 11356788887654 45554433333 3222 2222111110 0124
Q ss_pred CeeEEEEecCCCCeEEEEeCC-CcEE
Q 016457 169 DVTQVHFVPNNQNKVVSASVD-GLIC 193 (389)
Q Consensus 169 ~v~~~~~~~~~~~~l~~~~~d-~~i~ 193 (389)
.+..|.++|..+..++++..+ +.|.
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~~~~v~ 195 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATAPQGMY 195 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESSTTCEE
T ss_pred CeEEEEECCCCCCEEEEEEcCCCeEE
Confidence 578899998654466666654 4443
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.82 E-value=78 Score=28.85 Aligned_cols=60 Identities=20% Similarity=0.115 Sum_probs=40.5
Q ss_pred cceEEEeecCCCCeEEEEec------------CCeEEEEeCCCceeeeeecCC-CCcEEEEEEeCCCCCCEEEEE
Q 016457 39 DYVFEIVPKNDWSLMAVSLS------------TNVVKLYSPVTGQYSGECKGH-SSTVNQISFSGPSTPHVLHSC 100 (389)
Q Consensus 39 ~~v~~~~~~~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~-~~~v~~i~~~~~~~~~~l~s~ 100 (389)
.....|.|.++|.+.+.... ...|..++..++++...+.+. ...++.++|+|++ +.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~--ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQ--KTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTS--SEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCC--CEEEEE
Confidence 34567899999976553221 126777787778776666543 3578999999999 455543
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.40 E-value=98 Score=28.22 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=43.4
Q ss_pred CcEEEEEEeCCCCCCEEEEEec------------CCeEEEEEccCCeEEEEEEcC-CCCeEEEEEeCCCCeEEEeec
Q 016457 81 STVNQISFSGPSTPHVLHSCSS------------DGTIRAWDTRSFHEVWSVTAG-SQEIFCFSFGGSTDYLLAAGC 144 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~ 144 (389)
.....|.|.+++ .+.+.... ...|..++..+++....+... ...++.++|+|+++.|+++-.
T Consensus 476 nsPDnL~fd~~G--~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAG--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTC--CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCC--CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 456789999988 45553221 125666677777776666543 467999999999999888754
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=50.93 E-value=1e+02 Score=25.36 Aligned_cols=181 Identities=12% Similarity=0.054 Sum_probs=109.8
Q ss_pred CCCccccCCCCeEEEEecCce---------eee--eecCcceEEEeecCCCCeEEEEecCCeEEEEeCCC---------c
Q 016457 11 QPKSQSCDNVNSIKRFGLKNS---------IQT--NFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT---------G 70 (389)
Q Consensus 11 ~~~~~s~~~~~~i~~w~~~~~---------~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---------~ 70 (389)
.+..-..+.+|.|+--.+... +.. +...+.+..+........++..+..|.++-+.... |
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G 87 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKG 87 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCC
Confidence 344556788888888765421 111 12245565655555556777778888877765431 1
Q ss_pred eee---eeecCCCCcEEEEEEeC---CCCCCEEEEEecCCeEEEEEccCC-------eEEEEEEcCCCCeEEEEEeCCCC
Q 016457 71 QYS---GECKGHSSTVNQISFSG---PSTPHVLHSCSSDGTIRAWDTRSF-------HEVWSVTAGSQEIFCFSFGGSTD 137 (389)
Q Consensus 71 ~~~---~~~~~~~~~v~~i~~~~---~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 137 (389)
..+ ..+. ..+.|.++...+ +. .+|+..+..|.++.-.+... .....+.. .+.+..+.....+.
T Consensus 88 ~~i~~~l~l~-~~e~i~~~~~~~~~~~~--~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 88 QNISELINLG-DQEEILTIKNSKDLTDD--AYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp CBGGGTSCCC-TTCCEEEEEEESCCCTT--CEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred cChhhccCCC-CCCEEEEEEEeccCCCC--CEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 111 1122 234455554433 23 58888999999998887532 22222333 45666666654567
Q ss_pred eEEEeecCCeEEEEECcCC---------ceeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecC
Q 016457 138 YLLAAGCGSQIQFWDWRNK---------KQVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 138 ~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.++..+.+|.+..+....- .....+. ....|..+..-+++. .+++.+..|..+..++.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~--~~d~vv~~~~v~~~~-~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK--EGDLFVKVLSVKENP-YLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC--TTCCEEEEEECTTCS-EEEEEETTSEEEEEEGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC--CCCEEEEEEEECCCC-eEEEEECCCceEEEEHH
Confidence 8888999999998887531 1222232 345566666555553 78888999999998886
No 374
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=44.87 E-value=89 Score=28.63 Aligned_cols=58 Identities=12% Similarity=0.087 Sum_probs=39.2
Q ss_pred eEEEEEeCCCCeEEEeecC------------CeEEEEECcCCceeeeeeecccCCeeEEEEecCCCCeEEE
Q 016457 127 IFCFSFGGSTDYLLAAGCG------------SQIQFWDWRNKKQVACLEESHVEDVTQVHFVPNNQNKVVS 185 (389)
Q Consensus 127 v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 185 (389)
.-.|+|+|.+..+++...+ ..+.+.+..+++...-+.......++.++|+|+++ .|++
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~-tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK-TLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS-EEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCC-EEEE
Confidence 4678999888755554322 34666677777766555534567899999999986 4444
No 375
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=43.55 E-value=2.2e+02 Score=27.12 Aligned_cols=153 Identities=14% Similarity=0.080 Sum_probs=77.6
Q ss_pred CCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcC-------CCCeEEEEEeCCC-CeEEEeecCCe----
Q 016457 80 SSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAG-------SQEIFCFSFGGST-DYLLAAGCGSQ---- 147 (389)
Q Consensus 80 ~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~~~~~d~~---- 147 (389)
...|.+|+++|... ..++.++..+.|...+ +.++.=..+..+ ...+.+|+++|.+ +.++++..+..
T Consensus 14 ~g~i~~i~~~p~~~-~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTK-DLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSST-TCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCC-CEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 45899999998753 5677777767665444 223322222221 2469999999854 34555443211
Q ss_pred EEEEEC-cCCceeeeeeec--------ccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeee---ccCC
Q 016457 148 IQFWDW-RNKKQVACLEES--------HVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVI---NVGT 215 (389)
Q Consensus 148 i~iwd~-~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~ 215 (389)
-.||-. ..++.-..+... ....+..++++|..+..++.+...+.|.. ....+. ....+.... ....
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~-TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAK-TWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTS-SCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCc-ccCCCccCccccCCCC
Confidence 233332 233322222100 01135678998875556777764444332 222121 111111110 1124
Q ss_pred ceeeEEEecCCCcEEEEEecC
Q 016457 216 SVGKVGFFGETNKHLWCLTHI 236 (389)
Q Consensus 216 ~i~~~~~~~~~~~~l~~~~~d 236 (389)
.+..+.+.|.+...++++..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 567888886666667776655
No 376
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=39.70 E-value=1.6e+02 Score=24.20 Aligned_cols=190 Identities=9% Similarity=0.014 Sum_probs=101.4
Q ss_pred CCCCeEEEEecCCeEEEEeCCCceee---------eeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc---C--
Q 016457 48 NDWSLMAVSLSTNVVKLYSPVTGQYS---------GECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR---S-- 113 (389)
Q Consensus 48 ~~~~~l~~~~~d~~i~iw~~~~~~~~---------~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~---~-- 113 (389)
|+...+++.+.+|.|+--.+...+.. ..++.. +.+..+...... +.|+..+..|.+.-+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~--~~ll~fT~~G~~~~~~~~elp~~~ 77 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTH--DHILCFSSRGRVYSMKVYQLPEAT 77 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETT--CEEEEEETTSEEEEEEGGGSCCCC
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCC--CEEEEEECCCEEEEEEhhHCcCCC
Confidence 34567888888999987765432211 112222 334333333333 467777778876555432 1
Q ss_pred ----CeEEE---EEEcCCCCeEEEEEe---CCCCeEEEeecCCeEEEEECcCCc-------eeeeeeecccCCeeEEEEe
Q 016457 114 ----FHEVW---SVTAGSQEIFCFSFG---GSTDYLLAAGCGSQIQFWDWRNKK-------QVACLEESHVEDVTQVHFV 176 (389)
Q Consensus 114 ----~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~v~~~~~~ 176 (389)
|.++. .+.. ...|.++..- +++..++..+..|.++-..+.... ....+. .+ +.+..+...
T Consensus 78 ~~a~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~-~~-d~lv~~~~~ 154 (307)
T 1zi0_A 78 RGARGRPIVNLLPLEQ-DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLV-DG-DELIGVDLT 154 (307)
T ss_dssp SSSCCEEGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCC-TT-CCEEEEEEE
T ss_pred CCCCCeEhhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEEC-CC-CEEEEEEEe
Confidence 22211 1222 3456655432 245678889999999998775321 222233 22 555555554
Q ss_pred cCCCCeEEEEeCCCcEEEEecCCCCCCC---cccee-eeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 177 PNNQNKVVSASVDGLICTFDTGGDINDD---DLLES-VINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
... ..++..+.+|.+..++...-.... .-+.- -......|.++... .++..+++.+..|.++-.++.
T Consensus 155 ~~~-~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~-~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 155 SGE-DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVP-RGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CTT-CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECC-CSSCEEEEEETTSEEEEECGG
T ss_pred CCC-CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEe-cCCCEEEEEEcCCceEEEEHH
Confidence 444 378888889998888775210000 00100 01233456666544 344568888888888877664
No 377
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=39.35 E-value=1.5e+02 Score=23.87 Aligned_cols=158 Identities=10% Similarity=0.010 Sum_probs=90.3
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEE---EEccCCeEEEEEEcCCCCeEEEEEeC-CCCeEEEeecCCeEEEEECcCC
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRA---WDTRSFHEVWSVTAGSQEIFCFSFGG-STDYLLAAGCGSQIQFWDWRNK 156 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~i---wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~ 156 (389)
+.+..+.-.... +.|+.-+.+|.++- |++........+. ....|..+.... ++..++..+.+|.++-..+...
T Consensus 24 D~~~~~~~~~t~--~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFT--EGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETT--SCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEEEECCC--CEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 445555444444 46666677786553 3333222111122 356676665421 4678888999999999987653
Q ss_pred c------eeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCC-----CCccceeeeccCCceeeEEEecC
Q 016457 157 K------QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIN-----DDDLLESVINVGTSVGKVGFFGE 225 (389)
Q Consensus 157 ~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~ 225 (389)
. ....+. ..+.+..+...... ..++..+..|.+..+....-.. .......+ ..+..|..+... +
T Consensus 101 ~~~~~G~~~i~lk--egD~l~~~~~~~~~-~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L-~~~d~vv~~~~~-~ 175 (276)
T 3no0_A 101 EYKAQGMPIIKLT--EGDEVVSIASSVDE-THILLFTKKGRVARFSVREVPPSTPGARGVQGIKL-EKNDETSGLRIW-N 175 (276)
T ss_dssp TTCSTTEECSCCC--TTCCEEEEEECCSS-CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC-CTTCCEEEEEEE-S
T ss_pred hhhcCCeEEEecC--CCCEEEEEEEeCCC-CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEcc-CCCCEEEEEEEe-C
Confidence 2 122233 34556665555544 3788888999998887652100 00011111 223556666555 4
Q ss_pred CCcEEEEEecCCcEEEEEcCC
Q 016457 226 TNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 226 ~~~~l~~~~~d~~i~i~d~~~ 246 (389)
++..++..+..|.++...+..
T Consensus 176 ~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 176 GEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp SCSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEEeCCCcEEEeEHHH
Confidence 456888889999888887653
No 378
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=38.74 E-value=1.8e+02 Score=24.67 Aligned_cols=186 Identities=9% Similarity=0.066 Sum_probs=108.6
Q ss_pred CCCCccccCCCCeEEEEecCc---------ee--eeeecCcceEEEeecCCCCeEEEEecCCeEEEEeC---C------C
Q 016457 10 SQPKSQSCDNVNSIKRFGLKN---------SI--QTNFGDDYVFEIVPKNDWSLMAVSLSTNVVKLYSP---V------T 69 (389)
Q Consensus 10 ~~~~~~s~~~~~~i~~w~~~~---------~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~------~ 69 (389)
+.+..-+.+.+|.|+--.+.. .+ ..++..+.+..+........|+..+..|.++-+.. . .
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~ 85 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNAR 85 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccC
Confidence 344566788889998765421 11 22233566666666666667777777887766653 2 2
Q ss_pred ceeeee---ecCCCCcEEEEEEeCC-CCCCEEEEEecCCeEEEEEccCC-------eEEEEEEcCCCCeEEEEEeCCCCe
Q 016457 70 GQYSGE---CKGHSSTVNQISFSGP-STPHVLHSCSSDGTIRAWDTRSF-------HEVWSVTAGSQEIFCFSFGGSTDY 138 (389)
Q Consensus 70 ~~~~~~---~~~~~~~v~~i~~~~~-~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 138 (389)
|..+.. +. ....|.++....+ ....+|+.++..|.++--.+... .....++. .+.+..+.....+..
T Consensus 86 G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~ 163 (370)
T 3l6v_A 86 GRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRD 163 (370)
T ss_dssp CEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCE
T ss_pred CcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCce
Confidence 333222 22 3455666554322 11158999999999998886532 22223333 355555555545667
Q ss_pred EEEeecCCeEEEEECcCCce-------eeeeeecccCCeeEEEEec----------------------------------
Q 016457 139 LLAAGCGSQIQFWDWRNKKQ-------VACLEESHVEDVTQVHFVP---------------------------------- 177 (389)
Q Consensus 139 l~~~~~d~~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~---------------------------------- 177 (389)
++..+.+|.+..+....-.. +.-+.......|.++...+
T Consensus 164 i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~ 243 (370)
T 3l6v_A 164 VLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADN 243 (370)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC--------------------------------
T ss_pred EEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccc
Confidence 88888889888887643211 1111112345566655544
Q ss_pred -CCCCeEEEEeCCCcEEEEecC
Q 016457 178 -NNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 178 -~~~~~l~~~~~d~~i~i~d~~ 198 (389)
.+ ..+++.+..|..+...+.
T Consensus 244 ~~~-~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 244 GDV-AYILTATENGYGKRTPLA 264 (370)
T ss_dssp ----CEEEEEETTSEEEEEEGG
T ss_pred cCC-ceEEEeeCCCCEEEEEHH
Confidence 33 378899999999888876
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=36.23 E-value=2e+02 Score=24.41 Aligned_cols=224 Identities=10% Similarity=0.096 Sum_probs=108.7
Q ss_pred CCccccCCCCeEEEEecCc----------eee--ee-ec--CcceEEEeecCCCCeEEEEecCCeEEEEeCCC-ce----
Q 016457 12 PKSQSCDNVNSIKRFGLKN----------SIQ--TN-FG--DDYVFEIVPKNDWSLMAVSLSTNVVKLYSPVT-GQ---- 71 (389)
Q Consensus 12 ~~~~s~~~~~~i~~w~~~~----------~~~--~~-~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~---- 71 (389)
+..+-...+|.|..|-... ... .. .. ...|..++.. ....+.-..||.|..|-... |+
T Consensus 11 ~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g 88 (389)
T 3kci_A 11 RENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIG 88 (389)
T ss_dssp ----------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSS
T ss_pred ccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCC
Confidence 3445567789999996431 011 11 11 2234444432 23444456688888885432 11
Q ss_pred ------eeeeecC-CCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC----------e-EEEEEEc-CCCCeEEEEE
Q 016457 72 ------YSGECKG-HSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----------H-EVWSVTA-GSQEIFCFSF 132 (389)
Q Consensus 72 ------~~~~~~~-~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~----------~-~~~~~~~-~~~~v~~~~~ 132 (389)
....+.. ....+..++.+... ...+.-..||.|..|-.... . ....+.. ....|..++.
T Consensus 89 ~~~~~~~p~~v~~~~~~~~~~v~i~~G~--~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~ 166 (389)
T 3kci_A 89 GTESVSTPTLLESIQHVFIKKVAVNSGG--KHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 166 (389)
T ss_dssp SSCCEEEEEECGGGTTSCEEEEEECTTC--SEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CcCCccCCEEcccccCCceeEEEECcCC--CeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe
Confidence 0111111 12234555665444 46666678999999954321 0 1111111 1236777776
Q ss_pred eCCCCeEEEeecCCeEEEEECcCC-c----------eeeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCC
Q 016457 133 GGSTDYLLAAGCGSQIQFWDWRNK-K----------QVACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDI 201 (389)
Q Consensus 133 ~~~~~~l~~~~~d~~i~iwd~~~~-~----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 201 (389)
. ....++...+|.|+.|-.... + ....+.......|..++..... ...+.-..||.|+.|-.....
T Consensus 167 G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~-~~t~~l~~~G~v~~wG~n~~G 243 (389)
T 3kci_A 167 G--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGD-AQTLCLTDDDTVWSWGDGDYG 243 (389)
T ss_dssp C--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSS-CEEEEEETTTEEEEEECCGGG
T ss_pred C--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCC-cEEEEEccCCEEEEEeCCCCC
Confidence 3 556666777899999965431 1 0111111123356666654422 366667789999999765211
Q ss_pred CC------C-ccceeeec-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 202 ND------D-DLLESVIN-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 202 ~~------~-~~~~~~~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
.. . .....+.. ....|..++.- ..+.++...+|.|+.|-..
T Consensus 244 qLG~g~~~~~~~p~~v~~~~~~~v~~v~~G---~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 244 KLGRGGSDGCKVPMKIDSLTGLGVVKVECG---SQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp TTSSSSCCCEEEEEECGGGTTSCEEEEEEE---TTEEEEEETTSCEEEEECC
T ss_pred CCCCCCCCCccccEEecccCCCcEEEEeCC---CCEEEEEeCCCeEEEEeCC
Confidence 00 0 00111111 12246666654 2356666789999999764
No 380
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=34.77 E-value=78 Score=28.61 Aligned_cols=74 Identities=8% Similarity=-0.053 Sum_probs=38.1
Q ss_pred eeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecc-cceeeeeccCCCcccCCCCCCCceeEEEecCC
Q 016457 272 FVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGG-HTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED 350 (389)
Q Consensus 272 i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d 350 (389)
+++++....++.-.++.|+.+|.|.-..+...... ...+..+.-. ...+|. ..+.+++++.+|+.++.+
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~--~~~~e~~~v~~~~~pv~--------~~l~~~~~~~~Lyv~s~~ 471 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHG--GVQYEMVSVFKDGSPIL--------RDMAFSINQLYLYVMSER 471 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTE--EEEEEEEECCTTCCCCC--------SCCEECTTSSEEEEECSS
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCcc--ceeEEEEEeecCCCccc--------cceEEccCCCeEEEEecc
Confidence 34444444444335677888887766555432210 0001111100 112332 133889999999999987
Q ss_pred CeEEE
Q 016457 351 GRLCC 355 (389)
Q Consensus 351 g~v~i 355 (389)
+.++|
T Consensus 472 ~V~kv 476 (539)
T 3al9_A 472 QVTRV 476 (539)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 76655
No 381
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=34.59 E-value=2.1e+02 Score=24.25 Aligned_cols=146 Identities=10% Similarity=0.084 Sum_probs=86.9
Q ss_pred ecCCCCeEEEEecCCeEEEEeCCC---------ceeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEc---cC
Q 016457 46 PKNDWSLMAVSLSTNVVKLYSPVT---------GQYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDT---RS 113 (389)
Q Consensus 46 ~~~~~~~l~~~~~d~~i~iw~~~~---------~~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~---~~ 113 (389)
+-|+...+++.+.+|.|+--.+.. |..-..++ ..+.+..+...... +.|+..+..|.+.-+.. ..
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~--d~ll~fT~~G~~~~~~~~eip~ 79 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTH--DTLLTFTSSGKVFWLPVHQLPE 79 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTT--CEEEEEETTSEEEEEEGGGSCB
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCC--CEEEEEeCCCeEEEEEHHHCcC
Confidence 456778899999999999865432 11222333 34556555555444 56777777887655543 21
Q ss_pred ------CeEEE---EEEcCCCCeEEEEEeC---CCCeEEEeecCCeEEEEECcCCc-------eeeeeeecccCCeeEEE
Q 016457 114 ------FHEVW---SVTAGSQEIFCFSFGG---STDYLLAAGCGSQIQFWDWRNKK-------QVACLEESHVEDVTQVH 174 (389)
Q Consensus 114 ------~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~v~~~~ 174 (389)
|.++. .+.. ...|.++..-+ .+.+++.++..|.++-..+.... ....+. ....+..+.
T Consensus 80 ~~r~a~G~~i~~ll~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~--~~d~lv~v~ 156 (370)
T 3l6v_A 80 AGSNARGRPIINWIPLES-GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLD--EGDALVGVA 156 (370)
T ss_dssp CCTTSCCEEGGGSCCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCC--TTCCEEEEE
T ss_pred CCcccCCcCHhhccCCCC-CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeC--CCCEEEEEE
Confidence 22221 1222 35566554432 35689999999999998765322 222333 244555555
Q ss_pred EecCCCCeEEEEeCCCcEEEEecC
Q 016457 175 FVPNNQNKVVSASVDGLICTFDTG 198 (389)
Q Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~ 198 (389)
..... ..++..+.+|.+..|+..
T Consensus 157 ~~~~~-~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 157 LTDGD-RDVLLFASNGKTVRFGES 179 (370)
T ss_dssp EECSC-CEEEEEETTSEEEEEEGG
T ss_pred EeCCC-ceEEEEeCCCeEEEEEcc
Confidence 55444 378888889998888765
No 382
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=34.32 E-value=1.2e+02 Score=27.30 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=33.3
Q ss_pred EEEEecCCceEEEEEeccCCccccCCCeEEEecccceee-eeccCCCcccCCCCCCCceeEEEecCCCeEEEE
Q 016457 285 WVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVV-RSVLPMPSVQGRPAQSHGIFGWTGGEDGRLCCW 356 (389)
Q Consensus 285 ~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~s~~~~~l~s~~~dg~v~iW 356 (389)
.+..|+.+|.|.-.-+..... ...+..+.-....+| ..+ .++++..+|+.++.++.+++-
T Consensus 402 V~FlGT~~G~l~Kv~~~~~~~---~~~~ee~~v~~~~pi~~~l---------~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 402 IAFLGDSQGQLHRVYLGPGSD---GHPYSTQSIQQGSAVSRDL---------TFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEETTSEEEEEECSSSCC---SCCSEEEESSTTSCCCSCC---------EECTTSSEEEEECSSCEEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCC---eeEEeeeccCCCCcceeeE---------EEecCCCEEEEEeCCEEEEEE
Confidence 456777888776544432111 001122221122334 244 788899999999888877763
No 383
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=33.30 E-value=2.8e+02 Score=25.25 Aligned_cols=180 Identities=13% Similarity=0.185 Sum_probs=97.3
Q ss_pred CeEEEEeCCCceeeeeec--------CCCCcEEEEEEeCCCCCCEEEEEecCCe--------------------------
Q 016457 60 NVVKLYSPVTGQYSGECK--------GHSSTVNQISFSGPSTPHVLHSCSSDGT-------------------------- 105 (389)
Q Consensus 60 ~~i~iw~~~~~~~~~~~~--------~~~~~v~~i~~~~~~~~~~l~s~~~dg~-------------------------- 105 (389)
..|.+|+++ |+.+..+. .|-..+....|.-++. .-++....+|+
T Consensus 151 ~~l~aY~ld-G~~LW~idlg~ni~aGa~yt~~~V~DlDGDGk-aEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~Gp 228 (591)
T 2zux_A 151 VLIDAYKLD-GTKLWRINLGKNIRAGAHYTQFMVYDLDGDGK-AEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGP 228 (591)
T ss_dssp CEEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSS-CEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSC
T ss_pred cEEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCc-ceEEEEccCCcccCCceEecccccccccccceeecCC
Confidence 367788876 66555442 1445677777777776 45666656665
Q ss_pred --EEEEEccCCeEEEEEEcC--CCC---------------eEEEEEe-CCCCeEEEeec---CCeEEEEECcCCceee--
Q 016457 106 --IRAWDTRSFHEVWSVTAG--SQE---------------IFCFSFG-GSTDYLLAAGC---GSQIQFWDWRNKKQVA-- 160 (389)
Q Consensus 106 --i~iwd~~~~~~~~~~~~~--~~~---------------v~~~~~~-~~~~~l~~~~~---d~~i~iwd~~~~~~~~-- 160 (389)
|.++|=.+|+.+.++... ... ..++++. -....++.+-. ...|..||.+.+++..
T Consensus 229 EyL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W 308 (591)
T 2zux_A 229 EYLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLW 308 (591)
T ss_dssp CEEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEE
T ss_pred cEEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEE
Confidence 788888888888776642 111 2344443 11233444321 3468889988776533
Q ss_pred eeeecc----------cCCeeEEEEecCCCCeEEEEe----CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 161 CLEESH----------VEDVTQVHFVPNNQNKVVSAS----VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 161 ~~~~~~----------~~~v~~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
.+.... ...+....+.-+|+.-|+.|+ .||++ +|... ..|...+.-..|.|..
T Consensus 309 ~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~~iD~dG~~-L~st~------------~gHGDa~hv~dldP~r 375 (591)
T 2zux_A 309 TLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSMAVDHDGKG-MYSTG------------LGHGDALHTGDLDPGR 375 (591)
T ss_dssp EEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTEEECTTSCE-EEECS------------CCCCSCEEEECCCTTS
T ss_pred EecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeeeEECCCCCE-eeeCC------------CCCCCeeEEeecCCCC
Confidence 332110 023444455666655666554 23332 34433 2455555555555332
Q ss_pred -CcEEEEEecCC----cEEEEEcCCCceeEEee
Q 016457 227 -NKHLWCLTHIE----TLSIWDWKDGQNVASFE 254 (389)
Q Consensus 227 -~~~l~~~~~d~----~i~i~d~~~~~~~~~~~ 254 (389)
+..++.+.+++ -..+.|..+++.+....
T Consensus 376 ~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 376 PGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp SSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 33445544431 34457777777776654
No 384
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.74 E-value=2.3e+02 Score=24.15 Aligned_cols=136 Identities=7% Similarity=0.053 Sum_probs=81.5
Q ss_pred eEEEEeCCCc--eeeeeecC------CCCcEEEEEEe---CC--CCCCEEEEEe-cCCeEEEEEccCCeEEEEEEcC---
Q 016457 61 VVKLYSPVTG--QYSGECKG------HSSTVNQISFS---GP--STPHVLHSCS-SDGTIRAWDTRSFHEVWSVTAG--- 123 (389)
Q Consensus 61 ~i~iw~~~~~--~~~~~~~~------~~~~v~~i~~~---~~--~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--- 123 (389)
.|.+||+.++ +.++.+.- ....+..+++. |. ....++..+. ..+.|.++|+.+++.-+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6889999998 88877632 23468888887 22 1113444333 4678999999988765544210
Q ss_pred ---------------CCCeEEEEEeCC----CCeEEEeecCC-eEEEEE---CcCCc---eeeeeeeccc---CCeeEEE
Q 016457 124 ---------------SQEIFCFSFGGS----TDYLLAAGCGS-QIQFWD---WRNKK---QVACLEESHV---EDVTQVH 174 (389)
Q Consensus 124 ---------------~~~v~~~~~~~~----~~~l~~~~~d~-~i~iwd---~~~~~---~~~~~~~~~~---~~v~~~~ 174 (389)
...+..|+++|+ ++.|+-....+ .+.-.. ++... .+..+ +.. ..-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~--G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL--GNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE--EECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe--eecCCCCCcceEE
Confidence 246888889887 56666655432 333322 12221 12222 222 2334566
Q ss_pred Ee-cCCCCeEEEEeCCCcEEEEecCC
Q 016457 175 FV-PNNQNKVVSASVDGLICTFDTGG 199 (389)
Q Consensus 175 ~~-~~~~~~l~~~~~d~~i~i~d~~~ 199 (389)
+. .+| +++++--..+.|..|+..+
T Consensus 282 ~D~~~G-~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 282 YDPKTK-VIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp ECTTTC-EEEEEESSSSEEEEEETTS
T ss_pred EeCCCC-eEEEEeccCCeEEEEeCCC
Confidence 75 456 5777777888999999984
No 385
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=28.79 E-value=3.7e+02 Score=25.29 Aligned_cols=165 Identities=11% Similarity=-0.010 Sum_probs=0.0
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCCeEEEEEEcCC------CCeEEEEEeC-CCCeEEEeecC--------
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSFHEVWSVTAGS------QEIFCFSFGG-STDYLLAAGCG-------- 145 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~~-~~~~l~~~~~d-------- 145 (389)
..|..|+++|... ..++.+...+.|...+-....-........ ..|.+|+++| +.+.++++...
T Consensus 23 g~i~~i~~~p~~~-~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEK-DLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSST-TCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCC-CEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Q ss_pred CeEEEEECcCCceeeeeeeccc--------CCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCCCccceeeecc----
Q 016457 146 SQIQFWDWRNKKQVACLEESHV--------EDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDINDDDLLESVINV---- 213 (389)
Q Consensus 146 ~~i~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---- 213 (389)
..-.+.....++.-..+..... ..+..|+++|..++.++.+...| --+|--..+-.....+..+...
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g-~gl~~S~DgG~tW~~~~~~~~~~~~~ 180 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG-NGLWRSTDYGVTWSKVESFPNPGTYI 180 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT-CCEEEESSTTSSCEECTTCCCCCCCB
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC-CcEEEeCCCCcceecccCCCCCcccc
Q ss_pred ----------CCceeeEEEecCCCc------EEEEEecCCcEEEEEcCCC
Q 016457 214 ----------GTSVGKVGFFGETNK------HLWCLTHIETLSIWDWKDG 247 (389)
Q Consensus 214 ----------~~~i~~~~~~~~~~~------~l~~~~~d~~i~i~d~~~~ 247 (389)
...+..+.+.|.+.. .++++..++.-.+|...++
T Consensus 181 ~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~Dg 230 (737)
T 2cn3_A 181 YDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDG 230 (737)
T ss_dssp SCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESST
T ss_pred cCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCC
No 386
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=28.71 E-value=2.7e+02 Score=23.72 Aligned_cols=154 Identities=16% Similarity=0.184 Sum_probs=80.0
Q ss_pred CcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC---------eEEEE--EEc-CCCCeEEEEEeCCCCeEEEeecCCeE
Q 016457 81 STVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF---------HEVWS--VTA-GSQEIFCFSFGGSTDYLLAAGCGSQI 148 (389)
Q Consensus 81 ~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~---------~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i 148 (389)
..|..|+..... .++....++.|..|-.... ..... +.. ....|..++.. ..+.++...+|.|
T Consensus 68 ~~i~~va~G~~h---t~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G--~~h~~alt~~G~v 142 (406)
T 4d9s_A 68 HQIVSVTCGADH---TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG--DSHCLAVTMEGEV 142 (406)
T ss_dssp SCEEEEEECSSE---EEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTSCE
T ss_pred CCEEEEEeCcce---EEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEC--hhheEEEcCCCcE
Confidence 357777765332 3333333358999954321 11111 111 13367777763 5566677788999
Q ss_pred EEEECcCCce-----------eeeeeecccCCeeEEEEecCCCCeEEEEeCCCcEEEEecCCCCCC------Ccc-ceee
Q 016457 149 QFWDWRNKKQ-----------VACLEESHVEDVTQVHFVPNNQNKVVSASVDGLICTFDTGGDIND------DDL-LESV 210 (389)
Q Consensus 149 ~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~------~~~-~~~~ 210 (389)
+.|-....-. ...+.......|..++... +..+.-..+|.|+.|-....... ... ...+
T Consensus 143 ~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v 219 (406)
T 4d9s_A 143 QSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGA---EHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV 219 (406)
T ss_dssp EEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECS---SEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEEC
T ss_pred EEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCC---CeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEe
Confidence 9997543211 1111101123566666543 35666678999999976522110 000 0111
Q ss_pred ec-cCCceeeEEEecCCCcEEEEEecCCcEEEEEcC
Q 016457 211 IN-VGTSVGKVGFFGETNKHLWCLTHIETLSIWDWK 245 (389)
Q Consensus 211 ~~-~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 245 (389)
.. ....|..++.. ..+.++...+|.|+.|-..
T Consensus 220 ~~~~~~~i~~va~G---~~ht~~l~~~G~v~~wG~n 252 (406)
T 4d9s_A 220 TSTGGEKMSMVACG---WRHTISVSYSGALYTYGWS 252 (406)
T ss_dssp CCSTTCCEEEEEEC---SSEEEEEETTCCEEEEECC
T ss_pred cccCCceEEEEEEC---CCcEEEEcCCCCEEEeeCC
Confidence 11 12345555543 3456667789999999754
No 387
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=27.73 E-value=2.5e+02 Score=22.99 Aligned_cols=190 Identities=14% Similarity=0.084 Sum_probs=108.9
Q ss_pred CCCCeEEEEecCCeEEEEeCCCcee---------eeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC----
Q 016457 48 NDWSLMAVSLSTNVVKLYSPVTGQY---------SGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF---- 114 (389)
Q Consensus 48 ~~~~~l~~~~~d~~i~iw~~~~~~~---------~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~---- 114 (389)
++...+++.+.+|.|+--.+..-+. ...++.. +.+..+...... +.++..+..|.++-.....-
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~--~~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTH--DYLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETT--CEEEEEETTSEEEEEEGGGSCC--
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCC--CEEEEEECCCeEEEEEHHHCCCCC
Confidence 4566788889999998876543211 1122322 344444444344 47778888898776655321
Q ss_pred -----eE---EEEEEcCCCCeEEEEEeC---CCCeEEEeecCCeEEEEECcCC-------ceeeeeeecccCCeeEEEEe
Q 016457 115 -----HE---VWSVTAGSQEIFCFSFGG---STDYLLAAGCGSQIQFWDWRNK-------KQVACLEESHVEDVTQVHFV 176 (389)
Q Consensus 115 -----~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~ 176 (389)
.+ ...+.. ...|.++...+ .+.+++..+..|.++-..+... .....+. ..+.+..+...
T Consensus 83 r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~--~~d~lv~~~~~ 159 (312)
T 1suu_A 83 RASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN--DKDFVTSAEIV 159 (312)
T ss_dssp -----CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC--TTCCEEEEEEE
T ss_pred ccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC--CCCEEEEEEEe
Confidence 11 011222 34555554332 4667888899999998887532 2233343 34566666655
Q ss_pred cCCCCeEEEEeCCCcEEEEecCCCCCC-----CccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 177 PNNQNKVVSASVDGLICTFDTGGDIND-----DDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
..+. .++..+.+|.+..+....-... ......+. ....|..+... .++..+++.+..|..+..++..
T Consensus 160 ~~~~-~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v-~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 160 FKDE-KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSV-KENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CTTC-EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEEC-TTCSEEEEEETTSEEEEEEGGG
T ss_pred CCCC-EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEE-CCCCeEEEEECCCceEEEEHHH
Confidence 4443 7888899999999987621000 00111111 24456666555 3455688888899888888753
No 388
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=27.27 E-value=2.3e+02 Score=22.41 Aligned_cols=158 Identities=11% Similarity=-0.091 Sum_probs=77.0
Q ss_pred eEEEEeCCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCCCceeEEeeccccccc
Q 016457 182 KVVSASVDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKDGQNVASFENARSLAS 261 (389)
Q Consensus 182 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 261 (389)
.+++.+.+|.|+--...... .....+. .+..+..+... ...+.|+..+..|.++-+....-.... -. ...+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~---~~~~~lk-e~D~l~~~~~~-~t~~~ll~~T~~Gr~~~~~~~elp~~r-~~-G~~i~- 75 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDID---APGLNYK-AGDSFKAAVKG-KSNQPVVFVDSTGRSYAIDPITLPSAR-GQ-GEPLT- 75 (256)
T ss_dssp EEEEEETTSEEEEEESSCCC---STTSCCC-TTCCEEEEEEE-ETTSCEEEEETTSEEEEECGGGSCCSS-SC-CEEGG-
T ss_pred EEEEEeCCCEEEEeeCCcCC---ceeccCC-CCCEEEEEEEe-CCCCEEEEEeCCCeEEEEEHHHCCCcC-CC-CeEee-
Confidence 56777888888776654210 0011122 23444444444 334467777788876665543210000 00 00000
Q ss_pred CCccCCCCCceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeec--cCCCcccCCCCC-
Q 016457 262 DSWTLDDVDYFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSV--LPMPSVQGRPAQ- 338 (389)
Q Consensus 262 ~~~~~~~~~~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~~~s- 338 (389)
....+...+.|..+....++. +|+..+..|.++...+..... .....+..+ -..+..+.+...
T Consensus 76 ~~i~L~~~e~Iv~~~~~~~~~--~lll~T~~G~~Kr~~~~e~~~------------~~r~G~~~i~L~~~d~lv~~~~~~ 141 (256)
T 1zvt_A 76 GKLTLPPGATVDHMLMESDDQ--KLLMASDAGYGFVCTFNDLVA------------RNRAGKALITLPENAHVMPPVVIE 141 (256)
T ss_dssp GTCCCCTTCCEEEEECCCTTC--EEEEEBTTSEEEEEEGGGGCC------------CSTTCEECBCCCTTCCBCCCEECC
T ss_pred eeecCCCCCEEEEEEEeCCCC--EEEEEeCCCeEEEeEHHHhcc------------cCcCceEEEEECCCCEEEEEEEec
Confidence 011122345677664434445 567788999999998865322 001111111 111122211222
Q ss_pred CCceeEEEecCCCeEEEEeccCC
Q 016457 339 SHGIFGWTGGEDGRLCCWLSDDS 361 (389)
Q Consensus 339 ~~~~~l~s~~~dg~v~iW~~~~~ 361 (389)
.++..|+..+.+|.+..+.+++-
T Consensus 142 ~~~~~i~l~T~~G~~lrf~~~ei 164 (256)
T 1zvt_A 142 DASDMLLAITQAGRMLMFPVSDL 164 (256)
T ss_dssp CTTCEEEEEETTSEEEEEEGGGS
T ss_pred CCCCEEEEEcCCCeEEEEEHHHC
Confidence 23445677777888888887654
No 389
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=26.99 E-value=2.7e+02 Score=23.03 Aligned_cols=192 Identities=11% Similarity=0.059 Sum_probs=105.6
Q ss_pred CCCCeEEEEecCCeEEEEeCCCc----eeeeeecCCCCcEEEEEEeCCCCCCEEEEEecCCeEEEEEcc---C------C
Q 016457 48 NDWSLMAVSLSTNVVKLYSPVTG----QYSGECKGHSSTVNQISFSGPSTPHVLHSCSSDGTIRAWDTR---S------F 114 (389)
Q Consensus 48 ~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~---~------~ 114 (389)
|+...+++.+.+|.|+--.+... .....++.. +.+..+...... +.|+..+..|.+.-+... . |
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~--d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTK--DVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETT--SEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCC--CEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 55667888899999987754321 111223333 344444444344 477777888876555432 1 2
Q ss_pred eEEE---EEEcCCCCeEEEEEeCC---CCeEEEeecCCeEEEEECcCCc--------eeeeeeecccCCeeEEEEecCCC
Q 016457 115 HEVW---SVTAGSQEIFCFSFGGS---TDYLLAAGCGSQIQFWDWRNKK--------QVACLEESHVEDVTQVHFVPNNQ 180 (389)
Q Consensus 115 ~~~~---~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~ 180 (389)
.++. .+.. ...|.++..-++ +.+++.++.+|.++-..+.... ....+. ..+.+..+......
T Consensus 80 ~~i~~~i~L~~-~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~--e~d~lv~~~~~~~~- 155 (323)
T 1wp5_A 80 QHIANIIPIDR-DEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLK--NDDQVVDVHLTDGM- 155 (323)
T ss_dssp EEGGGTSCCCT-TCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCC--TTCCEEEEEEECSC-
T ss_pred cChhhccCCCC-CCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeC--CCCEEEEEEEeCCC-
Confidence 2211 1222 345665543322 5678889999999998875321 222333 23555555555444
Q ss_pred CeEEEEeCCCcEEEEecCCCCCC---Cccceee-eccCCceeeEEEecCCCcEEEEEecCCcEEEEEcCC
Q 016457 181 NKVVSASVDGLICTFDTGGDIND---DDLLESV-INVGTSVGKVGFFGETNKHLWCLTHIETLSIWDWKD 246 (389)
Q Consensus 181 ~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 246 (389)
..++..+.+|.+..+....-... ..-+.-+ ......|.++...+++...+++.+..|..+..++..
T Consensus 156 ~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 156 NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 37888888999988887521000 0001111 112345666655533332678888888877776653
No 390
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.86 E-value=2.4e+02 Score=25.45 Aligned_cols=69 Identities=10% Similarity=0.042 Sum_probs=42.0
Q ss_pred cEEEEEEeCCCCCCEEEEEecCCeEEEEEccCC----eEEEEEEcC--CCCeE-EEEEeCCCCeEEEeecCCeEEE
Q 016457 82 TVNQISFSGPSTPHVLHSCSSDGTIRAWDTRSF----HEVWSVTAG--SQEIF-CFSFGGSTDYLLAAGCGSQIQF 150 (389)
Q Consensus 82 ~v~~i~~~~~~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~--~~~v~-~~~~~~~~~~l~~~~~d~~i~i 150 (389)
.+++|+....+.-..+..|..+|.|.-..+... ..+..+... ..+|. .|.+++....|++++..+.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 355555544332256778889998765554422 223334332 45775 8999988888888877555544
No 391
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=21.84 E-value=2.7e+02 Score=24.97 Aligned_cols=74 Identities=9% Similarity=-0.170 Sum_probs=37.1
Q ss_pred ceeeecccCCCCeEEEEEecCCceEEEEEeccCCccccCCCeEEEecccceeeeeccCCCcccCCCCCCCceeEEEecCC
Q 016457 271 YFVDCHYPGEGENLWVIGGTGAGTVGYFPVNYGGAATIGPPEAVLVGGHTAVVRSVLPMPSVQGRPAQSHGIFGWTGGED 350 (389)
Q Consensus 271 ~i~~~~~~~~~~~~~l~~g~~dg~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~~~~~l~s~~~d 350 (389)
.++.++..+.+..-+++.|+.+|.|.-.-+....... ..+..+ .+...+..+....+.++.+|+.++.+
T Consensus 406 ~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~--~~~~~~---------~~~~~~~pi~~~l~~~~~~Lyv~s~~ 474 (527)
T 4fww_A 406 QVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYL--LYVSNF---------SLGDSGQPVQRDVSRLGDHLLFASGD 474 (527)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCC--CEEEEE---------EETTSCCCBCSCCEEETTEEEEEETT
T ss_pred EEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcc--eEEEEE---------EecCCCceeehhcccCCCEEEEEECC
Confidence 3556666655554467788888887655443222100 000111 11111111111345566678888878
Q ss_pred CeEEE
Q 016457 351 GRLCC 355 (389)
Q Consensus 351 g~v~i 355 (389)
+.++|
T Consensus 475 ~V~~v 479 (527)
T 4fww_A 475 QVFQV 479 (527)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77666
No 392
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=21.60 E-value=4.7e+02 Score=23.98 Aligned_cols=179 Identities=12% Similarity=0.181 Sum_probs=96.2
Q ss_pred eEEEEeCCCceeeeeec--------CCCCcEEEEEEeCCCCCCEEEEEecCCe---------------------------
Q 016457 61 VVKLYSPVTGQYSGECK--------GHSSTVNQISFSGPSTPHVLHSCSSDGT--------------------------- 105 (389)
Q Consensus 61 ~i~iw~~~~~~~~~~~~--------~~~~~v~~i~~~~~~~~~~l~s~~~dg~--------------------------- 105 (389)
.|.+|+++ |+.+..+. .|-..+....|.-++. .-++....+|+
T Consensus 156 ~l~aY~ld-G~~LW~idlg~Ni~aGahyt~~~V~DlDGDGk-aEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~e 233 (620)
T 2zuy_A 156 LIDAYKLD-GTFLWRINLGRNIRAGAHYTQFMVYDLDGDGK-AEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPE 233 (620)
T ss_dssp EEEEECTT-SCEEEEEECCTTSCCSTTSCCCEEECSSSSSS-CEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCC
T ss_pred EEEEEECC-CCEEEEEcCCCCcccccccCceeEEEcCCCCc-ceEEEEccCCcccCcceeecccccccccccceEecCCe
Confidence 67788875 65555442 2555677777877776 35555555554
Q ss_pred -EEEEEccCCeEEEEEEcC--CCC---------------eEEEEEeCCC--CeEEEeec---CCeEEEEECcCCceee--
Q 016457 106 -IRAWDTRSFHEVWSVTAG--SQE---------------IFCFSFGGST--DYLLAAGC---GSQIQFWDWRNKKQVA-- 160 (389)
Q Consensus 106 -i~iwd~~~~~~~~~~~~~--~~~---------------v~~~~~~~~~--~~l~~~~~---d~~i~iwd~~~~~~~~-- 160 (389)
+.++|-.+++.+.++... ... ..++++. ++ ..++.+-. ...|..||.+.++...
T Consensus 234 yL~vfdG~TG~~l~t~~~~p~rg~~~~WGD~yGnR~drf~~~vayL-DG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W 312 (620)
T 2zuy_A 234 YLTVFKGETGEALTTVEYEPPRGKLEDWGDGYGNRMDRFLAGTAYL-DGERPSLVMARGYYTRTVLVAYDFRNGRLKKRW 312 (620)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSGGGGTSSSSTTTTCEEEEEECT-TCC-CEEEEEECSSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCcceeeecccCCCcCccccccccccccccccceeEEec-CCCCceEEEecCcccceeEEEEEccCCceeeee
Confidence 588888888888776642 111 2344443 22 22333321 3567788887765433
Q ss_pred eeeecc----------cCCeeEEEEecCCCCeEEEEe----CCCcEEEEecCCCCCCCccceeeeccCCceeeEEEecCC
Q 016457 161 CLEESH----------VEDVTQVHFVPNNQNKVVSAS----VDGLICTFDTGGDINDDDLLESVINVGTSVGKVGFFGET 226 (389)
Q Consensus 161 ~~~~~~----------~~~v~~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 226 (389)
.+.... ...+....+.-+|+..|+.|+ .||++ +|... ..|...+.-..|.|..
T Consensus 313 ~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs~~iD~dG~~-L~st~------------~gHGDa~hv~d~dP~r 379 (620)
T 2zuy_A 313 VFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTG-LYSTG------------LGHGDAMHVGDLDPSR 379 (620)
T ss_dssp EEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETTEEECTTSSE-EEECS------------CCCCSCEEEECSCTTS
T ss_pred EecCCCCcccccccccCcCceEEecCCCCceeEEEeeeEECCCCCE-EeecC------------CCCCceeEEEecCCCC
Confidence 222100 022344445566665666554 23322 33322 2455555444555332
Q ss_pred -CcEEEEEecC----CcEEEEEcCCCceeEEeec
Q 016457 227 -NKHLWCLTHI----ETLSIWDWKDGQNVASFEN 255 (389)
Q Consensus 227 -~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~ 255 (389)
+..++.+.++ .-..++|.++++.+.....
T Consensus 380 pGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~~ 413 (620)
T 2zuy_A 380 KGLEVFQVHEDATKPYGLSLRDAGTGEILWGVHA 413 (620)
T ss_dssp SSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCEEEEEecCCCCCCceEEEECCCCcEEEEecC
Confidence 3344444443 2566788888888877654
No 393
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.56 E-value=3.2e+02 Score=24.36 Aligned_cols=27 Identities=11% Similarity=0.073 Sum_probs=19.7
Q ss_pred CCceeeecccCCCCeEEEEEecCCceEEE
Q 016457 269 VDYFVDCHYPGEGENLWVIGGTGAGTVGY 297 (389)
Q Consensus 269 ~~~i~~~~~~~~~~~~~l~~g~~dg~i~i 297 (389)
..+|..+.++++.+ +|..++.++.++|
T Consensus 461 ~~pI~~m~l~~~~~--~Lyv~s~~~V~~v 487 (495)
T 1q47_A 461 PTTISAMELSTKQQ--QLYIGSTAGVAQL 487 (495)
T ss_dssp CCCCCEEEEETTTT--EEEEEBSSCEEEE
T ss_pred CCccceEEEcCCCC--EEEEEECCeEEEE
Confidence 36789999999888 6666766664443
Done!