Query 016461
Match_columns 389
No_of_seqs 142 out of 1519
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 13:58:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016461.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016461hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.5E-83 5.3E-88 622.5 24.3 382 1-389 1-423 (427)
2 3qb0_A Actin-related protein 4 100.0 3E-81 1E-85 611.5 30.3 364 2-388 21-498 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 1.2E-76 4E-81 569.9 32.0 373 2-388 3-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 2.3E-77 7.8E-82 577.7 18.1 386 1-387 1-390 (394)
5 4fo0_A Actin-related protein 8 100.0 9.1E-76 3.1E-80 596.5 25.3 376 4-389 15-591 (593)
6 1k8k_A ARP3, actin-like protei 100.0 1.2E-71 4.2E-76 543.0 30.7 383 1-389 2-414 (418)
7 4am6_A Actin-like protein ARP8 100.0 4.1E-64 1.4E-68 493.3 25.7 377 1-389 37-653 (655)
8 1jce_A ROD shape-determining p 100.0 2.4E-35 8.1E-40 279.8 22.2 314 4-365 3-329 (344)
9 2v7y_A Chaperone protein DNAK; 99.9 2.9E-24 9.9E-29 213.5 13.8 298 5-360 3-349 (509)
10 1dkg_D Molecular chaperone DNA 99.9 9E-23 3.1E-27 196.0 16.3 220 101-361 135-381 (383)
11 3h1q_A Ethanolamine utilizatio 99.9 4.1E-22 1.4E-26 182.4 18.6 243 5-359 29-272 (272)
12 3qfu_A 78 kDa glucose-regulate 99.9 1.3E-22 4.3E-27 195.7 13.7 213 100-360 152-391 (394)
13 3i33_A Heat shock-related 70 k 99.8 3.2E-21 1.1E-25 186.5 11.8 214 101-360 158-399 (404)
14 1yuw_A Heat shock cognate 71 k 99.8 6.2E-19 2.1E-23 176.6 17.8 215 102-362 140-380 (554)
15 2kho_A Heat shock protein 70; 99.8 3.4E-18 1.2E-22 172.9 18.0 215 101-362 135-382 (605)
16 3d2f_A Heat shock protein homo 99.7 1.7E-17 5.7E-22 169.2 16.2 215 102-363 139-384 (675)
17 4gni_A Putative heat shock pro 99.7 8.6E-18 2.9E-22 162.7 10.2 231 83-360 131-399 (409)
18 4b9q_A Chaperone protein DNAK; 99.7 6.7E-16 2.3E-20 156.1 15.5 217 101-360 135-380 (605)
19 2fsj_A Hypothetical protein TA 99.7 2.2E-16 7.4E-21 149.1 9.4 180 6-197 23-240 (346)
20 2ych_A Competence protein PILM 99.6 3.3E-15 1.1E-19 142.9 17.2 171 117-319 153-331 (377)
21 4a2a_A Cell division protein F 99.5 1.6E-13 5.5E-18 132.3 15.9 175 113-319 166-353 (419)
22 4apw_A ALP12; actin-like prote 99.4 8.2E-13 2.8E-17 123.6 8.0 186 1-196 4-219 (329)
23 2zgy_A Plasmid segregation pro 99.3 5E-12 1.7E-16 118.0 12.2 87 126-216 136-229 (320)
24 3js6_A Uncharacterized PARM pr 99.3 1.8E-11 6.2E-16 115.5 10.9 191 1-197 1-232 (355)
25 2d0o_A DIOL dehydratase-reacti 98.5 1.4E-06 4.8E-11 83.9 12.8 74 137-221 390-468 (610)
26 1nbw_A Glycerol dehydratase re 98.4 7.4E-07 2.5E-11 86.1 9.4 74 137-221 392-470 (607)
27 4ehu_A Activator of 2-hydroxyi 97.9 0.00012 4.2E-09 66.1 13.0 51 291-360 203-253 (276)
28 1hux_A Activator of (R)-2-hydr 96.8 0.007 2.4E-07 54.3 10.6 46 296-360 210-255 (270)
29 1t6c_A Exopolyphosphatase; alp 96.5 0.0093 3.2E-07 54.7 9.0 75 114-191 96-178 (315)
30 3r8e_A Hypothetical sugar kina 96.3 0.23 7.9E-06 45.4 17.5 48 124-173 113-168 (321)
31 3mdq_A Exopolyphosphatase; str 96.3 0.0058 2E-07 56.1 6.2 74 115-190 89-170 (315)
32 3vgl_A Glucokinase; ROK family 96.0 0.66 2.3E-05 42.3 18.8 49 123-173 91-146 (321)
33 2gup_A ROK family protein; sug 96.0 0.083 2.8E-06 47.6 12.5 52 119-173 86-142 (292)
34 1u6z_A Exopolyphosphatase; alp 95.9 0.024 8.3E-07 55.6 9.2 73 115-190 96-176 (513)
35 3cer_A Possible exopolyphospha 95.8 0.024 8.1E-07 52.7 8.0 76 115-190 102-191 (343)
36 2qm1_A Glucokinase; alpha-beta 95.6 0.14 4.9E-06 46.7 12.7 46 126-173 106-158 (326)
37 4db3_A Glcnac kinase, N-acetyl 95.6 0.25 8.4E-06 45.4 14.1 51 122-174 114-171 (327)
38 4htl_A Beta-glucoside kinase; 95.0 1.9 6.5E-05 38.7 17.9 48 124-173 93-147 (297)
39 3hi0_A Putative exopolyphospha 95.0 0.2 7E-06 48.9 12.0 73 114-189 99-178 (508)
40 3vov_A Glucokinase, hexokinase 94.6 0.86 2.9E-05 41.1 14.5 51 122-174 92-149 (302)
41 2ews_A Pantothenate kinase; PA 94.0 0.18 6E-06 45.4 8.4 50 295-360 237-287 (287)
42 2aa4_A Mannac kinase, putative 94.0 0.8 2.7E-05 40.9 12.9 49 122-173 90-145 (289)
43 2yhw_A Bifunctional UDP-N-acet 93.8 1.1 3.8E-05 41.1 13.7 46 126-173 129-181 (343)
44 2i7n_A Pantothenate kinase 1; 92.7 0.35 1.2E-05 44.8 8.3 56 291-359 302-358 (360)
45 3cet_A Conserved archaeal prot 92.3 0.12 4E-06 47.2 4.4 25 149-173 127-151 (334)
46 2ap1_A Putative regulator prot 91.5 1.3 4.4E-05 40.4 10.7 47 126-174 118-171 (327)
47 3djc_A Type III pantothenate k 91.4 2.5 8.5E-05 37.4 12.0 19 6-24 4-22 (266)
48 2h3g_X Biosynthetic protein; p 90.0 2.3 8E-05 37.6 10.6 19 6-24 2-20 (268)
49 1zc6_A Probable N-acetylglucos 86.8 5.8 0.0002 35.5 11.2 87 80-172 53-145 (305)
50 1zbs_A Hypothetical protein PG 85.2 9.3 0.00032 33.9 11.7 69 103-172 62-132 (291)
51 2ch5_A NAGK protein; transfera 84.1 15 0.00052 33.2 13.0 91 80-171 49-143 (347)
52 3bex_A Type III pantothenate k 81.0 21 0.00073 30.9 11.9 25 148-173 121-145 (249)
53 2e2o_A Hexokinase; acetate and 75.8 39 0.0013 29.7 12.5 55 103-159 62-117 (299)
54 3aap_A Ectonucleoside triphosp 68.0 5.6 0.00019 36.7 4.9 101 80-184 52-177 (353)
55 1saz_A Probable butyrate kinas 61.5 38 0.0013 31.3 9.4 72 297-384 298-375 (381)
56 1zxo_A Conserved hypothetical 59.1 19 0.00066 31.8 6.6 55 119-173 75-131 (291)
57 2hoe_A N-acetylglucosamine kin 56.9 45 0.0015 30.6 9.1 49 124-174 184-237 (380)
58 3htv_A D-allose kinase, alloki 46.3 1.2E+02 0.0041 26.8 9.8 53 120-174 99-157 (310)
59 3epq_A Putative fructokinase; 44.2 12 0.0004 33.6 2.6 51 122-174 91-148 (302)
60 3lm2_A Putative kinase; struct 41.6 1.2E+02 0.0042 25.5 8.6 46 126-173 89-135 (226)
61 3htv_A D-allose kinase, alloki 40.4 28 0.00095 31.1 4.5 55 298-360 243-298 (310)
62 3cj1_A Ectonucleoside triphosp 39.5 65 0.0022 30.6 7.1 22 149-170 190-211 (456)
63 1saz_A Probable butyrate kinas 36.4 20 0.00068 33.2 3.0 24 150-174 177-200 (381)
64 4e1j_A Glycerol kinase; struct 35.8 21 0.00071 34.7 3.1 25 1-25 23-47 (520)
65 3qbx_A Anhydro-N-acetylmuramic 32.7 13 0.00043 34.4 0.9 23 296-318 285-307 (371)
66 2hoe_A N-acetylglucosamine kin 31.9 22 0.00076 32.8 2.5 68 275-360 302-370 (380)
67 3mcp_A Glucokinase; structural 31.2 3E+02 0.01 25.0 12.1 123 6-173 11-171 (366)
68 1djx_A PLC-D1, phosphoinositid 25.9 41 0.0014 33.5 3.3 43 81-129 236-278 (624)
69 3cqy_A Anhydro-N-acetylmuramic 25.8 19 0.00064 33.3 0.7 23 296-318 291-313 (370)
70 2ch5_A NAGK protein; transfera 24.8 53 0.0018 29.5 3.7 24 1-24 3-26 (347)
71 2jsh_A Appetite-regulating hor 24.4 20 0.00067 19.1 0.3 13 368-380 9-21 (26)
72 3eno_A Putative O-sialoglycopr 23.8 36 0.0012 30.8 2.3 27 295-321 250-276 (334)
73 2yrb_A Protein fantom; beta sa 23.8 37 0.0013 27.1 2.0 71 124-198 19-90 (156)
74 2e2o_A Hexokinase; acetate and 23.6 21 0.00072 31.6 0.6 23 1-25 1-23 (299)
75 3djc_A Type III pantothenate k 23.4 1.4E+02 0.0048 26.0 6.0 49 151-199 4-53 (266)
76 3zx3_A Ectonucleoside triphosp 22.8 79 0.0027 30.0 4.5 89 81-170 89-202 (452)
77 2yhx_A Hexokinase B; transfera 22.4 87 0.003 29.7 4.7 56 297-360 386-441 (457)
78 2zkm_X 1-phosphatidylinositol- 22.1 63 0.0021 33.2 3.9 43 81-129 386-429 (799)
79 1woq_A Inorganic polyphosphate 21.8 2E+02 0.0068 24.5 6.7 52 121-174 107-166 (267)
80 1z05_A Transcriptional regulat 20.9 1.6E+02 0.0056 27.3 6.4 48 124-173 204-258 (429)
81 3h6e_A Carbohydrate kinase, FG 20.1 51 0.0017 31.6 2.6 21 5-25 7-27 (482)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-83 Score=622.52 Aligned_cols=382 Identities=35% Similarity=0.603 Sum_probs=321.1
Q ss_pred CC-CCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchh--------------------hhhhhccCCceEecccc
Q 016461 1 MD-NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE--------------------ESLMEQELKDTIVGAAA 59 (389)
Q Consensus 1 m~-~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--------------------~~~~~~~~~~~~vg~~~ 59 (389)
|. +.++||||+||.++|+||||++.|+.+|||++|+++.... ....+.+.++++||++|
T Consensus 1 m~~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea 80 (427)
T 3dwl_A 1 MASFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDA 80 (427)
T ss_dssp --CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHH
T ss_pred CCCCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHH
Confidence 54 4578999999999999999999999999999999975410 00002234578999999
Q ss_pred ccccC-cceeeccccCCcccChhhHHHHHHHHhhhcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehh
Q 016461 60 LDLRH-QLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQ 138 (389)
Q Consensus 60 ~~~~~-~~~~~~p~~~g~i~d~~~~e~~l~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~ 138 (389)
...+. .+.++||+++|.|.|||.+|++|+|+|.+.|++++.++|++|++|+++++..|+++++++||.|++|+++++.+
T Consensus 81 ~~~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~ 160 (427)
T 3dwl_A 81 LKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQ 160 (427)
T ss_dssp HHTHHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEH
T ss_pred hhCcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecch
Confidence 87764 67899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcC--------CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHH
Q 016461 139 AVLTLYAQG--------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETV 210 (389)
Q Consensus 139 ~~~a~~~~g--------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~ 210 (389)
+++|+|++| .+||+|||+|++.|+|+||++|+++.++++++++||++++++|.++|+.+++. ..+.+++
T Consensus 161 ~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~ 237 (427)
T 3dwl_A 161 AVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTA 237 (427)
T ss_dssp HHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHH
T ss_pred HHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHH
Confidence 999999998 68999999999999999999999999999999999999999999999888755 4577999
Q ss_pred HHHHHhcceeccChHHHHhhcccCcccceeEEC--CCCc--EEEECccccccccccCCCCCCCCC-CCChHHHHHHHHHh
Q 016461 211 RQIKEKLCYISYDYKREYQLGLETTILVKNYTL--PDGR--VIKVGTERFQAPEALFTPELIDVE-GDGMADMVFRCIQE 285 (389)
Q Consensus 211 ~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l--pdg~--~i~i~~~~~~~~E~lF~p~~~~~~-~~~l~~~i~~~i~~ 285 (389)
+++|+++|||+.|+.++.+.........+.|.+ |||. .+.++.|||.+||+||+|++++.+ ..+|+++|.++|++
T Consensus 238 ~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~ 317 (427)
T 3dwl_A 238 ERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQS 317 (427)
T ss_dssp HHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHT
T ss_pred HHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHh
Confidence 999999999999988776543332223567888 8987 888999999999999999999988 48999999999999
Q ss_pred CChhHHHHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcC------CCCCCcceeEEEeCCCCCcceeeehHHHHh
Q 016461 286 MDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKG------NKDGLKKLRLRIEDPPRRKHMVYLGGAVLA 359 (389)
Q Consensus 286 ~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~------~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 359 (389)
||+|+|+.|++||||+||+|++|||.+||++||+.++.....+. .|.. .+++|..+++|++++|+||||+|
T Consensus 318 c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~---~~vkv~~~~~r~~s~WiGGSila 394 (427)
T 3dwl_A 318 SPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGG---VDVNVISHKRQRNAVWFGGSLLA 394 (427)
T ss_dssp SCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------C---CCCCEECCTTCTTHHHHHHHHHH
T ss_pred CCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCc---eeEEEecCCccccceecCceeec
Confidence 99999999999999999999999999999999999853211000 0222 67899999999999999999999
Q ss_pred cCCCCCCcccccHHHHhhcCcccccccCCC
Q 016461 360 GIMKDAPEFWISRDDYLEEGIACLSKCGPS 389 (389)
Q Consensus 360 ~~l~~~~~~~itr~ey~e~G~~~l~~k~~~ 389 (389)
+ +++|+++||||+||+|+|++|+||||+|
T Consensus 395 s-l~~f~~~witk~EYeE~G~~iv~~~~~~ 423 (427)
T 3dwl_A 395 Q-TPEFGSYCHTKADYEEYGASIARRYQIF 423 (427)
T ss_dssp H-STTHHHHSEEHHHHHHSCGGGGSCCCC-
T ss_pred c-ccchhheeEEHHHHhhhChHhheecccc
Confidence 9 9999999999999999999999999987
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-81 Score=611.50 Aligned_cols=364 Identities=27% Similarity=0.464 Sum_probs=327.5
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEeccc-cccccCcceeeccccCCcccCh
Q 016461 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAA-ALDLRHQLDVSYPVNNGIVQNW 80 (389)
Q Consensus 2 ~~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~d~ 80 (389)
++..+||||+||.++|+||+|++.|+.++||++++++... .+..++|++ +...+..+.+++|+++|.|.||
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~--------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE--------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS--------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC--------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 5678999999999999999999999999999999987531 236799997 5556778899999999999999
Q ss_pred hhHHHHHHHHhhhcCCCCCCCC-eEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCceEEEEEcCCC
Q 016461 81 EDMGQVWDHAFFSELKIDPPEC-KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDG 159 (389)
Q Consensus 81 ~~~e~~l~~~~~~~l~~~~~~~-~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~ 159 (389)
|++|.+|+|+|.+.|++++.++ ||+|++|++++...|+++++++||.|++++++++.+++||+|++|++||+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcC------------------CCCccC------c-hHHHHHHHH
Q 016461 160 VTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG------------------YSMNRT------A-DFETVRQIK 214 (389)
Q Consensus 160 ~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~------------------~~~~~~------~-~~~~~~~ik 214 (389)
.|+|+||++|+++++++.++++||++++++|.++|+.++ +.+... . +.++++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998642 222221 1 355899999
Q ss_pred HhcceeccC--hHHHHhhcccCcccceeEECCCCcEEEECcc-ccccccccCCCCCCCC---------------------
Q 016461 215 EKLCYISYD--YKREYQLGLETTILVKNYTLPDGRVIKVGTE-RFQAPEALFTPELIDV--------------------- 270 (389)
Q Consensus 215 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~~-~~~~~E~lF~p~~~~~--------------------- 270 (389)
|++|||+.+ ++++.. .......+.|+||||+.|.++.| ||.+||.||+|+.++.
T Consensus 253 E~~c~Va~~~~~~~~~~--~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKT--ELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHH--HHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhh--hccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999987 444321 12244578899999999999999 9999999999987643
Q ss_pred -----------------------------------------------------------CCCChHHHHHHHHHhCChhHH
Q 016461 271 -----------------------------------------------------------EGDGMADMVFRCIQEMDIDNR 291 (389)
Q Consensus 271 -----------------------------------------------------------~~~~l~~~i~~~i~~~~~d~r 291 (389)
+..+|+++|.++|++||+|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 457899999999999999999
Q ss_pred HHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCC---CCCcceeeehHHHHhcCCCCCCcc
Q 016461 292 MMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDP---PRRKHMVYLGGAVLAGIMKDAPEF 368 (389)
Q Consensus 292 ~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~~l~~~~~~ 368 (389)
+.|++||||+||+|++|||.+||++||..+ .| . .+++|..+ ++|++++|+||||+|+ |++|+++
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l--------~p-~---~~i~v~~~~~~~er~~s~WiGgsilas-l~~f~~~ 477 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKI--------LP-S---LKFRILTTGHTIERQYQSWLGGSILTS-LGTFHQL 477 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHHHHHH--------ST-T---SCCCEECCSCTGGGGSHHHHHHHHHHT-CHHHHHT
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHHHHHh--------CC-C---CeeEEEcCCCCCccCccEEcccEEEec-Ccchhce
Confidence 999999999999999999999999999999 67 3 67888887 6899999999999999 9999999
Q ss_pred cccHHHHhhcCc-ccccccCC
Q 016461 369 WISRDDYLEEGI-ACLSKCGP 388 (389)
Q Consensus 369 ~itr~ey~e~G~-~~l~~k~~ 388 (389)
||||+||+|+|+ +||+|||.
T Consensus 478 witk~EY~E~G~~~iv~~kc~ 498 (498)
T 3qb0_A 478 WVGKKEYEEVGVERLLNDRFR 498 (498)
T ss_dssp SEEHHHHHTTCCHHHHHHTTC
T ss_pred EEEHHHHhhhCcHhhccccCc
Confidence 999999999999 99999993
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.2e-76 Score=569.86 Aligned_cols=373 Identities=45% Similarity=0.859 Sum_probs=335.2
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEeccccccccCcceeeccccCCcccChh
Q 016461 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWE 81 (389)
Q Consensus 2 ~~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~ 81 (389)
++.++||||+||.++|+||+|++.|++++||++++++.+.... +...+++++|+++...+....+++|+++|.|.||+
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~--~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d 80 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 80 (375)
T ss_dssp -CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC---------CCEEHHHHHHHTTSEEEECSEETTEECCHH
T ss_pred CCCceEEEECCCCeEEEEECCCCCCceeecccccccccccccc--CCCCCCeEechhHhhcCcccceeccccCCcccCHH
Confidence 3567899999999999999999999999999999987654221 22234789999998888888999999999999999
Q ss_pred hHHHHHHHHhhhcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCceEEEEEcCCCce
Q 016461 82 DMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVT 161 (389)
Q Consensus 82 ~~e~~l~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t 161 (389)
.++.+|+|+|.+.|++++.++++++++|++++...|+++++++||.+++++++++++++||+|++|.++++|||+|+++|
T Consensus 81 ~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt 160 (375)
T 2fxu_A 81 DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 160 (375)
T ss_dssp HHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCE
T ss_pred HHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCce
Confidence 99999999998899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhcccCcccceeE
Q 016461 162 HVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNY 241 (389)
Q Consensus 162 ~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 241 (389)
+|+||++|+++.++..++++||++++++|.++|..+++.+....+.+.++++|+++||++.++..+.+...........|
T Consensus 161 ~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~ 240 (375)
T 2fxu_A 161 HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240 (375)
T ss_dssp EEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEE
T ss_pred EEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEE
Confidence 99999999999998899999999999999999998887765556788999999999999988877655433334456789
Q ss_pred ECCCCcEEEECccccccccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHHHHHHHh
Q 016461 242 TLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDR 321 (389)
Q Consensus 242 ~lpdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~ 321 (389)
.+|||+.+.++.+||.+||.||+|.+++.+..+|.++|.++|++||+|.|+.+++||+||||+|++|||.+||+++|..+
T Consensus 241 ~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~ 320 (375)
T 2fxu_A 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL 320 (375)
T ss_dssp ECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred ECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCCCCCCcccccHHHHhhcCcccccccCC
Q 016461 322 YLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWISRDDYLEEGIACLSKCGP 388 (389)
Q Consensus 322 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~~~~~~~itr~ey~e~G~~~l~~k~~ 388 (389)
.|.. .+++|..+++|.+++|+||+++|+ +++|+++||||+||+|+|+++++|||+
T Consensus 321 --------~p~~---~~v~v~~~~~p~~~~w~G~si~a~-l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 321 --------APST---MKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp --------SCTT---CCCCEECCTTTTSHHHHHHHHHHH-CGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred --------CCCC---eeEEEEcCCCCCccEEcchHHhhC-cccHhhceeeHHHHhhhChHHHhhhcc
Confidence 5654 457788888999999999999999 999999999999999999999999996
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.3e-77 Score=577.69 Aligned_cols=386 Identities=62% Similarity=1.124 Sum_probs=165.3
Q ss_pred CCCC--CeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEeccccccccCcceeeccccCCccc
Q 016461 1 MDNR--NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQ 78 (389)
Q Consensus 1 m~~~--~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~ 78 (389)
|++. .+||||+||.++|+||+|++.|++++||++++++.......++...+++++|+++...+....+++|+++|.|.
T Consensus 1 ~~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~ 80 (394)
T 1k8k_B 1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVR 80 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEe
Confidence 5544 78999999999999999999999999999998876532200011234789999998888888899999999999
Q ss_pred ChhhHHHHHHHHh-hhcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCceEEEEEcC
Q 016461 79 NWEDMGQVWDHAF-FSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSG 157 (389)
Q Consensus 79 d~~~~e~~l~~~~-~~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG 157 (389)
|||.++.+|+|+| .+.|++++.++++++++|++++...|+++++++||.++++++++++++++|+|++|+++|+|||+|
T Consensus 81 dwd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG 160 (394)
T 1k8k_B 81 NWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSG 160 (394)
T ss_dssp -------------------------------------------------------------------------CCEEEEC
T ss_pred cHHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcC
Confidence 9999999999999 889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhcccCccc
Q 016461 158 DGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (389)
Q Consensus 158 ~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~ 237 (389)
+++|+|+||++|+++.++..++++||++++++|.++|..+++.+....+.+.++++|+++||++.|+..+.+...+....
T Consensus 161 ~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~ 240 (394)
T 1k8k_B 161 DGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVL 240 (394)
T ss_dssp SSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTT
T ss_pred CCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcC
Confidence 99999999999999999999999999999999999999988887766789999999999999998887765543333445
Q ss_pred ceeEECCCCcEEEECccccccccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHHHH
Q 016461 238 VKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKE 317 (389)
Q Consensus 238 ~~~~~lpdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~e 317 (389)
...|.+|||+.+.++.+||.+||+||+|++++.+..+|+++|.++|++||+|.|+.+++||+||||+|++|||.+||+++
T Consensus 241 ~~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 241 VESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp CEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred ceEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCCCCCC-cccccHHHHhhcCcccccccC
Q 016461 318 ILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAP-EFWISRDDYLEEGIACLSKCG 387 (389)
Q Consensus 318 l~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~~~~-~~~itr~ey~e~G~~~l~~k~ 387 (389)
|..++.+..+++.+..-...+++|..+++|.+++|+|||++|+ +++|+ ++||||+||+|+|+++++|..
T Consensus 321 l~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas-l~~f~~~~~itk~eY~e~G~~~~~~~~ 390 (394)
T 1k8k_B 321 LKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD-IMKDKDNFWMTRQEYQEKGVRVLEKLG 390 (394)
T ss_dssp HHHHHHHHTCSSCCCTTCCCCC-------------------------------------------------
T ss_pred HHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC-CcCCccceeecHHHHhhhCHHHHHhcC
Confidence 9988644333322211112468888888999999999999999 99999 999999999999999999854
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-76 Score=596.54 Aligned_cols=376 Identities=21% Similarity=0.364 Sum_probs=293.8
Q ss_pred CCeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhh---------------------------------------
Q 016461 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEES--------------------------------------- 44 (389)
Q Consensus 4 ~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~--------------------------------------- 44 (389)
+.+||||+||.++|||||||+.|+. +|+++|++.......
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 4589999999999999999999985 699999975421100
Q ss_pred --------------------------------hhhccCCceEecccccc--ccCcceeeccccCC-----------cccC
Q 016461 45 --------------------------------LMEQELKDTIVGAAALD--LRHQLDVSYPVNNG-----------IVQN 79 (389)
Q Consensus 45 --------------------------------~~~~~~~~~~vg~~~~~--~~~~~~~~~p~~~g-----------~i~d 79 (389)
......+++++|++|+. .++.+.++|||++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 00012346899999975 35678999999999 5789
Q ss_pred hhhHHHHHHHHhhhcCCCCCCC---CeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCceEEEEEc
Q 016461 80 WEDMGQVWDHAFFSELKIDPPE---CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156 (389)
Q Consensus 80 ~~~~e~~l~~~~~~~l~~~~~~---~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDi 156 (389)
||++|.+|+|+|.++|++++++ ++|||++|+++++..|++++++|||.|+||+++++++++||+||+|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCcc-----CchHHHHHHHHHhcceeccChHHHHhh-
Q 016461 157 GDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNR-----TADFETVRQIKEKLCYISYDYKREYQL- 230 (389)
Q Consensus 157 G~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~ik~~~~~v~~~~~~~~~~- 230 (389)
|++.|+|+||+||+++.+++.++++||++++++|.++|..+++.+.. ..++++++++|+++||++.|+..+...
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 99999999999999999999999999999999999999998866542 457899999999999998764321100
Q ss_pred ----------------------------c------------------------------------------ccCccccee
Q 016461 231 ----------------------------G------------------------------------------LETTILVKN 240 (389)
Q Consensus 231 ----------------------------~------------------------------------------~~~~~~~~~ 240 (389)
. .........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 0 000112346
Q ss_pred EECCCCcEEEECccccccccccCCCCCCC--------------------------------CCCCChHHHHHHHHHhCC-
Q 016461 241 YTLPDGRVIKVGTERFQAPEALFTPELID--------------------------------VEGDGMADMVFRCIQEMD- 287 (389)
Q Consensus 241 ~~lpdg~~i~i~~~~~~~~E~lF~p~~~~--------------------------------~~~~~l~~~i~~~i~~~~- 287 (389)
+.+|+|..+.++.+++.+||.||+|+... .+..+|+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 78899999999999999999999985321 134689999999999998
Q ss_pred hhHHHHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCc--ceeEEEeCCC---CCcceeeehHHHHhcCC
Q 016461 288 IDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLK--KLRLRIEDPP---RRKHMVYLGGAVLAGIM 362 (389)
Q Consensus 288 ~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~--~~~v~v~~~~---~~~~~~w~Gasi~a~~l 362 (389)
+|.|+.|++||+||||+|++|||.+||++||..++ |..+. ..+++|..++ +|++++|+||||+|+ |
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~--------p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilas-L 564 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKM--------PPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLAC-L 564 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHS--------CHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHH-C
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhC--------cchhccccceEEEECCCCCCCCceeeehhhHHHhc-C
Confidence 59999999999999999999999999999999883 43211 1358888876 789999999999999 9
Q ss_pred CCCCcccccHHHHhhcCcccccccCCC
Q 016461 363 KDAPEFWISRDDYLEEGIACLSKCGPS 389 (389)
Q Consensus 363 ~~~~~~~itr~ey~e~G~~~l~~k~~~ 389 (389)
++|+++||||+||+|+|++||++||+|
T Consensus 565 ~~f~~~wItk~EYeE~G~~il~~kc~f 591 (593)
T 4fo0_A 565 DTTQELWIYQREWQRFGVRMLRERAAF 591 (593)
T ss_dssp GGGGGTCEEHHHHHHHTTHHHHHHCSS
T ss_pred ccHHHeeECHHHHHhhCcHHHhhcCCc
Confidence 999999999999999999999999997
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=1.2e-71 Score=542.97 Aligned_cols=383 Identities=33% Similarity=0.547 Sum_probs=331.9
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhh------hhhccCCceEeccccccccCcceeeccccC
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEES------LMEQELKDTIVGAAALDLRHQLDVSYPVNN 74 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~ 74 (389)
+++..+||||+||.++|+||+|++.|+.++||++++++...... ..+....++++|++|...+ ...+++|+++
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~~ 80 (418)
T 1k8k_A 2 AGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRH 80 (418)
T ss_dssp -CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEET
T ss_pred CCCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEeccccC
Confidence 13457899999999999999999999999999999987642100 0011223689999998775 4789999999
Q ss_pred CcccChhhHHHHHHHHhhhcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhh---------
Q 016461 75 GIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA--------- 145 (389)
Q Consensus 75 g~i~d~~~~e~~l~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~--------- 145 (389)
|.+.|||.++.+|+|+|.+.|+++++++++++++|++++...|+.+.+++||.+++++++++++|++|+|+
T Consensus 81 G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~ 160 (418)
T 1k8k_A 81 GIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGE 160 (418)
T ss_dssp TEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCS
T ss_pred CEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCC
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChH
Q 016461 146 QGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYK 225 (389)
Q Consensus 146 ~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~ 225 (389)
.+. +|+|||+|+++|+|+||++|+++.++..+.++||++++++|.++|.+++..+....+.+.++++|+++|++..++.
T Consensus 161 ~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~ 239 (418)
T 1k8k_A 161 RTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLV 239 (418)
T ss_dssp CCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHH
T ss_pred CCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHH
Confidence 566 9999999999999999999999999889999999999999999999888776666788999999999999998876
Q ss_pred HHHhhcc-cCcccceeEECCCCc-----EEEECccccccccccCCCCCCCCCC-CChHHHHHHHHHhCChhHHHHhhcCe
Q 016461 226 REYQLGL-ETTILVKNYTLPDGR-----VIKVGTERFQAPEALFTPELIDVEG-DGMADMVFRCIQEMDIDNRMMLYQHI 298 (389)
Q Consensus 226 ~~~~~~~-~~~~~~~~~~lpdg~-----~i~i~~~~~~~~E~lF~p~~~~~~~-~~l~~~i~~~i~~~~~d~r~~l~~nI 298 (389)
.+.+... ........|.+||+. .+.++.+||.+||.||+|++++.+. .+|.++|.++|++||+|.|+.+++||
T Consensus 240 ~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~I 319 (418)
T 1k8k_A 240 KEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNI 319 (418)
T ss_dssp HHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCE
T ss_pred HHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhce
Confidence 6643221 112234679999998 8999999999999999999888774 69999999999999999999999999
Q ss_pred EEecCCCCCCChHHHHHHHHHHhhhhhh-----hcCC---CCCCcceeEEEeCCCCCcceeeehHHHHhcCCCCCCcccc
Q 016461 299 VLSGGSTMYPGLPSRLEKEILDRYLEVV-----LKGN---KDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWI 370 (389)
Q Consensus 299 vl~GG~s~i~G~~~rl~~el~~~~~~~~-----~~~~---~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~~~~~~~i 370 (389)
+|+||+|++|||.+||+++|..++.... +++. |.. .+++|..+++|++++|+|||++|+ +++|+++||
T Consensus 320 vL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~---~~v~v~~~~~~~~~~w~Ggsilas-l~~f~~~~i 395 (418)
T 1k8k_A 320 VLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKP---IDVQVITHHMQRYAVWFGGSMLAS-TPEFYQVCH 395 (418)
T ss_dssp EEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCC---CCCCEECCTTCTTHHHHHHHHHTT-SHHHHHHSE
T ss_pred EEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCc---eeEEEeCCCccccceeHhHHHHHc-CccHhheEE
Confidence 9999999999999999999998853211 1111 333 568888899999999999999999 999999999
Q ss_pred cHHHHhhcCcccccccCCC
Q 016461 371 SRDDYLEEGIACLSKCGPS 389 (389)
Q Consensus 371 tr~ey~e~G~~~l~~k~~~ 389 (389)
||+||+|+|+++++|||.|
T Consensus 396 tk~ey~e~G~~~~~~~~~f 414 (418)
T 1k8k_A 396 TKKDYEEIGPSICRHNPVF 414 (418)
T ss_dssp EHHHHHHHCGGGGGCCCCC
T ss_pred EHHHHhhhCHHHHhhhccc
Confidence 9999999999999998876
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=4.1e-64 Score=493.34 Aligned_cols=377 Identities=21% Similarity=0.353 Sum_probs=309.7
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchh---------h-------------------------hh-
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE---------E-------------------------SL- 45 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~---------~-------------------------~~- 45 (389)
|+...+|||++||.++|+|+|.|..|. .+|++++++..... . +.
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~ 115 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYY 115 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999999999999999 67999997643110 0 00
Q ss_pred ------------------------hh---------c-cCCceEecccccc-ccCcceeeccccCCccc----C-------
Q 016461 46 ------------------------ME---------Q-ELKDTIVGAAALD-LRHQLDVSYPVNNGIVQ----N------- 79 (389)
Q Consensus 46 ------------------------~~---------~-~~~~~~vg~~~~~-~~~~~~~~~p~~~g~i~----d------- 79 (389)
+. . ..++++||++|.. .+..+.++||+++|.|. |
T Consensus 116 k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~ 195 (655)
T 4am6_A 116 KRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAEL 195 (655)
T ss_dssp SCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHH
T ss_pred CCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccccc
Confidence 00 0 1136789999987 46788999999999998 8
Q ss_pred hhhHHHHHHHHhh-hcCCCCCC---CCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcC-CceEEEE
Q 016461 80 WEDMGQVWDHAFF-SELKIDPP---ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG-LLTGLVI 154 (389)
Q Consensus 80 ~~~~e~~l~~~~~-~~l~~~~~---~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVV 154 (389)
||.+|.+|+|+|. +.|++++. ++||+|++|+++++..|+++++++||.|++|+++++.++++|+|++| .++|+||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 9999999999997 38999886 79999999999999999999999999999999999999999999999 6999999
Q ss_pred EcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCC-----CCccCchHHHHHHHHHhccee-ccChHHHH
Q 016461 155 DSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGY-----SMNRTADFETVRQIKEKLCYI-SYDYKREY 228 (389)
Q Consensus 155 DiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v-~~~~~~~~ 228 (389)
|+|++.|+|+||++|+++.+++.++++||++++++|.++|..+++ .++...+.++++++|+++||| ..|+.
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~--- 352 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA--- 352 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC---
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh---
Confidence 999999999999999999999999999999999999999999986 455667899999999999999 44432
Q ss_pred hhcccCcccceeE--ECCCC----cEEEECccccccccccCCCCCCCC--------------------------------
Q 016461 229 QLGLETTILVKNY--TLPDG----RVIKVGTERFQAPEALFTPELIDV-------------------------------- 270 (389)
Q Consensus 229 ~~~~~~~~~~~~~--~lpdg----~~i~i~~~~~~~~E~lF~p~~~~~-------------------------------- 270 (389)
.....| ..|++ ..+.++.|||.+||+||+|++++.
T Consensus 353 -------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~ 425 (655)
T 4am6_A 353 -------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSL 425 (655)
T ss_dssp -------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCH
T ss_pred -------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccch
Confidence 111122 23543 468999999999999999953210
Q ss_pred -----------------------------------------------CCCChHHHHHHHHHh-C---ChhHHHHhhcCeE
Q 016461 271 -----------------------------------------------EGDGMADMVFRCIQE-M---DIDNRMMLYQHIV 299 (389)
Q Consensus 271 -----------------------------------------------~~~~l~~~i~~~i~~-~---~~d~r~~l~~nIv 299 (389)
...+|..+|.++|.+ | |....+++++||+
T Consensus 426 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nil 505 (655)
T 4am6_A 426 SQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNIL 505 (655)
T ss_dssp HHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEE
T ss_pred hHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEE
Confidence 014899999999984 3 4445569999999
Q ss_pred EecCCCCCCChHHHHHHHHHHh-------------hhhh-----hhc------C--------------------------
Q 016461 300 LSGGSTMYPGLPSRLEKEILDR-------------YLEV-----VLK------G-------------------------- 329 (389)
Q Consensus 300 l~GG~s~i~G~~~rl~~el~~~-------------~~~~-----~~~------~-------------------------- 329 (389)
++||+|++|||...|++.|... +... .+. +
T Consensus 506 ivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 585 (655)
T 4am6_A 506 IVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQ 585 (655)
T ss_dssp EESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHH
T ss_pred EEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhh
Confidence 9999999999999999888651 0100 000 0
Q ss_pred ------CCCCCcceeEEEeCCCCC---cceeeehHHHHhcCCCCCCcccccHHHHhhcCcccccccCCC
Q 016461 330 ------NKDGLKKLRLRIEDPPRR---KHMVYLGGAVLAGIMKDAPEFWISRDDYLEEGIACLSKCGPS 389 (389)
Q Consensus 330 ------~~~~~~~~~v~v~~~~~~---~~~~w~Gasi~a~~l~~~~~~~itr~ey~e~G~~~l~~k~~~ 389 (389)
.-.+-+..+|+|..+|.+ ++++|+|||++|+ |++|.++||||+||+|.|++||++||+|
T Consensus 586 ~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~-l~~f~e~wIt~~Eyde~G~~il~~k~~f 653 (655)
T 4am6_A 586 HQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQ-IKLVEELFITNSDWDVHGSRILQYKCIF 653 (655)
T ss_dssp HHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTT-SHHHHHHCEEHHHHHHHGGGGGGTSCSS
T ss_pred hhhhhhccccCCceeeEEeCCccccCcceeEEecceeeee-cccHhheeecHHHHhhhcchheEecccc
Confidence 001112356899999866 8999999999999 9999999999999999999999999987
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=2.4e-35 Score=279.82 Aligned_cols=314 Identities=14% Similarity=0.138 Sum_probs=240.8
Q ss_pred CCeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEecccccccc----CcceeeccccCCcccC
Q 016461 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR----HQLDVSYPVNNGIVQN 79 (389)
Q Consensus 4 ~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d 79 (389)
..+|+||+||.++++|++++. |...+||+++.+... .+.+++|++|.... ....+.+|+++|.+.+
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~---------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~ 72 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT---------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIAD 72 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT---------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESS
T ss_pred CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC---------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCC
Confidence 368999999999999998875 777899999875431 12468999986532 2345678999999999
Q ss_pred hhhHHHHHHHHhhhcCCCC-CCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC-----ceEEE
Q 016461 80 WEDMGQVWDHAFFSELKID-PPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-----LTGLV 153 (389)
Q Consensus 80 ~~~~e~~l~~~~~~~l~~~-~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglV 153 (389)
|+..+.+|.+++.+..... ....++++++|..++...|+.+.+. +|.++++.+.++++|.+|+++++. .+.+|
T Consensus 73 ~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lV 151 (344)
T 1jce_A 73 YTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMV 151 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEE
T ss_pred hHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEE
Confidence 9999999999995432222 3458999999999999999998885 699999999999999999999986 68999
Q ss_pred EEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhccc
Q 016461 154 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLE 233 (389)
Q Consensus 154 VDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~ 233 (389)
||+|+++|+++++..|.++. ....++||+++++.|.+.+.++. ....+.+.++++|+++++...+...+..
T Consensus 152 vDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~---~~~~~~~~ae~~K~~l~~~~~~~~~~~~---- 222 (344)
T 1jce_A 152 VDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETY---RVAIGERTAERVKIEIGNVFPSKENDEL---- 222 (344)
T ss_dssp EEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHH---CEECCHHHHHHHHHHHCBCSCCHHHHHC----
T ss_pred EEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHh---CcccCHHHHHHHHHHHhccCccccCCcc----
Confidence 99999999999999998875 56889999999999999987641 1123578899999999887644321110
Q ss_pred CcccceeEECCCCc--EEEECccccccccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhh-cCeEEecCCCCCCCh
Q 016461 234 TTILVKNYTLPDGR--VIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLY-QHIVLSGGSTMYPGL 310 (389)
Q Consensus 234 ~~~~~~~~~lpdg~--~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~-~nIvl~GG~s~i~G~ 310 (389)
........+.+|. .+.++.++|. .+|+|.. ..+.+.|.++|++++.+.+..++ ++|+|+||+|++|||
T Consensus 223 -~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l 293 (344)
T 1jce_A 223 -ETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGL 293 (344)
T ss_dssp -EEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTH
T ss_pred -eEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHH
Confidence 0111111233554 4666666654 2333211 15888999999999988888888 799999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCCCCC
Q 016461 311 PSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDA 365 (389)
Q Consensus 311 ~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~~~ 365 (389)
.++|++++. .++ ..+.+|.+++|.||++++..++.|
T Consensus 294 ~~~l~~~~~-----------------~~v--~~~~~p~~ava~Gaa~~a~~~~~~ 329 (344)
T 1jce_A 294 DTLLQKETG-----------------ISV--IRSEEPLTAVAKGAGMVLDKVNIL 329 (344)
T ss_dssp HHHHHHHHS-----------------SCE--EECSSTTTHHHHHHHHGGGCHHHH
T ss_pred HHHHHHHHC-----------------CCc--cccCChHHHHHHHHHHHHhChHHH
Confidence 999999873 112 234578999999999999844544
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.91 E-value=2.9e-24 Score=213.46 Aligned_cols=298 Identities=18% Similarity=0.229 Sum_probs=202.6
Q ss_pred CeEEEeCCCceEEEeecCCCCCccc--------cccceEecCcchhhhhhhccCCceEecccccccc--Cc---ceeec-
Q 016461 5 NVVVCDNGTGYVKCGFAGENFPNSV--------FPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR--HQ---LDVSY- 70 (389)
Q Consensus 5 ~~iiiD~Gs~~ik~G~ag~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~---~~~~~- 70 (389)
.+|.||+||.+++++++.+..|.++ +||+++.. ...+++|++|.... .. ..+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~------------~~~~~vG~~A~~~~~~~p~~~~~~Kr~ 70 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK------------NGERLVGEVAKRQAITNPNTIISIKRH 70 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES------------SSSEEESHHHHTTTTTCSSEEECGGGT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC------------CCcEEECHHHHHhHHhCCCcHHHHHHh
Confidence 6899999999999999988777766 78887752 12578898875421 11 12222
Q ss_pred ---ccc---CCcccChhhHHHHHHHHhhhcCC------CCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehh
Q 016461 71 ---PVN---NGIVQNWEDMGQVWDHAFFSELK------IDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQ 138 (389)
Q Consensus 71 ---p~~---~g~i~d~~~~e~~l~~~~~~~l~------~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~ 138 (389)
|+. +|. +|+ .++++.++| ++|. +......++++.|..++...|+.+.+. ++..|++.+.++++
T Consensus 71 lg~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~E 145 (509)
T 2v7y_A 71 MGTDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINE 145 (509)
T ss_dssp TTSCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEH
T ss_pred cCCCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecC
Confidence 554 554 343 455555555 2222 123346899999999999999998886 58899999999999
Q ss_pred hHHHHhhcCC-----ceEEEEEcCCCceEEEEee--CCee-cccceeeecccHhHHHHHHHHHHHhc-----CCCCccCc
Q 016461 139 AVLTLYAQGL-----LTGLVIDSGDGVTHVVPVV--DGYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA 205 (389)
Q Consensus 139 ~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~--dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~ 205 (389)
|.||++++|. .+.+|+|+|+++++++.+. +|.. +..+....++||.++++.|.+++.++ +.++....
T Consensus 146 p~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~ 225 (509)
T 2v7y_A 146 PTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDK 225 (509)
T ss_dssp HHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCH
T ss_pred HHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCH
Confidence 9999999886 4789999999999999876 4643 33334457999999999998887653 33332110
Q ss_pred -----hHHHHHHHHHhcceeccChHHHHhhcccCcc-cceeEECCCC---cEEEECccccc-cccccCCCCCCCCCCCCh
Q 016461 206 -----DFETVRQIKEKLCYISYDYKREYQLGLETTI-LVKNYTLPDG---RVIKVGTERFQ-APEALFTPELIDVEGDGM 275 (389)
Q Consensus 206 -----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~-~~~~~~lpdg---~~i~i~~~~~~-~~E~lF~p~~~~~~~~~l 275 (389)
-.+.++++|+.++.... ... .+..+..++| ..+.++.+.|. ..+.+|+ .+
T Consensus 226 ~~~~~l~~~aE~~K~~ls~~~~-----------~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~---------~i 285 (509)
T 2v7y_A 226 MALQRLKDAAEKAKKELSGVTQ-----------TQISLPFISANENGPLHLEMTLTRAKFEELSAHLVE---------RT 285 (509)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSE-----------EEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHH---------TT
T ss_pred HHHHHHHHHHHHHHHhcCCCCc-----------EEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHH---------HH
Confidence 13566777777654320 000 0001111223 23456655553 3333443 57
Q ss_pred HHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehH
Q 016461 276 ADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGG 355 (389)
Q Consensus 276 ~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Ga 355 (389)
.+.|.++|+.+.. .....++|+|+||+|.+|++.++|++.+.. .+..+.+|..++|.||
T Consensus 286 ~~~i~~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~-------------------~~~~~~~p~~aVa~Ga 344 (509)
T 2v7y_A 286 MGPVRQALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELGK-------------------EPHKGVNPDEVVAIGA 344 (509)
T ss_dssp HHHHHHHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSS-------------------CCBCCSCTTTHHHHHH
T ss_pred HHHHHHHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhCC-------------------CcCcCCCchhhhHhhH
Confidence 8888888887653 234568999999999999999999988731 1223457889999999
Q ss_pred HHHhc
Q 016461 356 AVLAG 360 (389)
Q Consensus 356 si~a~ 360 (389)
+++|.
T Consensus 345 a~~a~ 349 (509)
T 2v7y_A 345 AIQGG 349 (509)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99997
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.89 E-value=9e-23 Score=196.03 Aligned_cols=220 Identities=17% Similarity=0.166 Sum_probs=155.2
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCc------eEEEEEcCCCceEEEEeeCC-----
Q 016461 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TGLVIDSGDGVTHVVPVVDG----- 169 (389)
Q Consensus 101 ~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~v~pv~dG----- 169 (389)
...++++.|..++...|+.+.+. ++..+++.+.++.+|.||+++++.. +.+|||+|+++|+++.+..+
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~ 213 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCC
Confidence 35799999999999999988886 5889999999999999999988753 68999999999999988744
Q ss_pred -eecc-cceeeecccHhHHHHHHHHHHHhc-----CCCCccC-----chHHHHHHHHHhcceeccChHHHHhhcccCccc
Q 016461 170 -YSFP-HLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT-----ADFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (389)
Q Consensus 170 -~~~~-~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~ 237 (389)
.... .+....++||.++++.|.+++.++ +.++... ...+.++++|+.++.... ..-..
T Consensus 214 ~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~----------~~i~i 283 (383)
T 1dkg_D 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ----------TDVNL 283 (383)
T ss_dssp CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSE----------EEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCc----------eEEEE
Confidence 2211 123457999999999999887654 3333211 113667788887764320 00000
Q ss_pred ceeEECCCC-c--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHH
Q 016461 238 VKNYTLPDG-R--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSR 313 (389)
Q Consensus 238 ~~~~~lpdg-~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~r 313 (389)
...+..++| . .+.++.+.|. ..+.+++ .+.+.|.++|.++.. +....++|+|+||+|++||+.++
T Consensus 284 ~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~---------~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~ 352 (383)
T 1dkg_D 284 PYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKK 352 (383)
T ss_dssp EEEEEETTEEEEEEEEEEHHHHHHHSHHHHH---------HHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHH
T ss_pred ecccccCCCCeeEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHH
Confidence 111233444 2 2456665553 2233332 477888888888753 33455899999999999999999
Q ss_pred HHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcC
Q 016461 314 LEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGI 361 (389)
Q Consensus 314 l~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~ 361 (389)
|++.+.. .+..+.+|.+++|.||+++|..
T Consensus 353 l~~~~~~-------------------~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 353 VAEFFGK-------------------EPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp HHHHHSS-------------------CCBCSSCTTTHHHHHHHHHTTT
T ss_pred HHHHhCC-------------------CCCCCcChHHHHHHHHHHHHHh
Confidence 9988731 1233567899999999999983
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.89 E-value=4.1e-22 Score=182.38 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=178.8
Q ss_pred CeEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEeccccccccCcceeeccccCCcccChhhHH
Q 016461 5 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMG 84 (389)
Q Consensus 5 ~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~e 84 (389)
-.++||+||.++|+.+..++. . .++. +. .-..|+.+|.+.||+..+
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~~-~-----~l~~-------------------~~---------~~~~~l~~g~i~d~~~~~ 74 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQEG-I-----PVAG-------------------AL---------KWASVVKDGLVVDYIGAI 74 (272)
T ss_dssp CEEEEECCSSEEEEEEECTTC-C-----EEEE-------------------EE---------EECCCCBTTBCTTHHHHH
T ss_pred EEEEEEcccceEEEEEECCCC-c-----EEEE-------------------Ee---------ecccccCCCEEEcHHHHH
Confidence 478999999999998743321 1 1111 00 123588999999999999
Q ss_pred HHHHHHhhhcCCC-CCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCceEEEEEcCCCceEE
Q 016461 85 QVWDHAFFSELKI-DPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHV 163 (389)
Q Consensus 85 ~~l~~~~~~~l~~-~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~v 163 (389)
.+|++++...... ......++++.|..+....|+ .++.+++.++++...+..++.++++++|..+++|||+|+++|.+
T Consensus 75 ~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~ 153 (272)
T 3h1q_A 75 QIVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGI 153 (272)
T ss_dssp HHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEE
Confidence 9999998633222 223356778888777655555 45667899999999999999999999999999999999999999
Q ss_pred EEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhcccCcccceeEEC
Q 016461 164 VPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTL 243 (389)
Q Consensus 164 ~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l 243 (389)
+++.+|.++. ....++||.++++.+.+.+. .+.+.++++|++++. ..+..
T Consensus 154 ~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~-----~~~~~-------------- 203 (272)
T 3h1q_A 154 AVIEKGKITA--TFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSR-----HREIM-------------- 203 (272)
T ss_dssp EEEETTEEEE--ECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTT-----HHHHH--------------
T ss_pred EEEECCEEEE--EecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCC-----HHHHH--------------
Confidence 9999999885 57899999999999998875 346788889887651 00100
Q ss_pred CCCcEEEECccccccccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHHHHHHHhhh
Q 016461 244 PDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYL 323 (389)
Q Consensus 244 pdg~~i~i~~~~~~~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~ 323 (389)
...+.+++ .+.+.+.+++++++ ..++|+|+||+|.+|||.++|++++..
T Consensus 204 -------------~~~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~--- 252 (272)
T 3h1q_A 204 -------------RVVRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK--- 252 (272)
T ss_dssp -------------HHHHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS---
T ss_pred -------------HHHHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC---
Confidence 01111111 36677777777765 135899999999999999999988731
Q ss_pred hhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHh
Q 016461 324 EVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLA 359 (389)
Q Consensus 324 ~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 359 (389)
.+..+.+|.++.|.||+++|
T Consensus 253 ----------------~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 253 ----------------EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ----------------CCBCCSSGGGHHHHHHHTTC
T ss_pred ----------------CccccCChHHHHHHHHHhcC
Confidence 22335688999999999875
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.88 E-value=1.3e-22 Score=195.68 Aligned_cols=213 Identities=20% Similarity=0.211 Sum_probs=144.5
Q ss_pred CCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCc------eEEEEEcCCCceEEEEee--CCee
Q 016461 100 PECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TGLVIDSGDGVTHVVPVV--DGYS 171 (389)
Q Consensus 100 ~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVDiG~~~t~v~pv~--dG~~ 171 (389)
.-..++++.|..++...|+.+.+.+ +..+++.+.++.+|.||+++++.. +.+|+|+|+++|+++.+. ++..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 3468999999999999999887776 889999999999999999998753 349999999999888774 4433
Q ss_pred cc-cceeeecccHhHHHHHHHHHHHhc-----CCCCccCchH-------HHHHHHHHhcceeccChHHHHhhcccCcccc
Q 016461 172 FP-HLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTADF-------ETVRQIKEKLCYISYDYKREYQLGLETTILV 238 (389)
Q Consensus 172 ~~-~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~~-------~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 238 (389)
.. ......++||.++++.|.+.+..+ +.++. .+. +.++.+|+.+... ..
T Consensus 231 ~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~--~~~~~~~~l~~~ae~~K~~ls~~----------------~~ 292 (394)
T 3qfu_A 231 EVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVS--DNNKALAKLKREAEKAKRALSSQ----------------MS 292 (394)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCT--TCHHHHHHHHHHHHHHHHHTTTC----------------SE
T ss_pred EEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCC--cCHHHHHHHHHHHHHHHHHcccC----------------Cc
Confidence 22 223347999999999998887532 22221 122 2334444332211 11
Q ss_pred eeEEC---CCCc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHH
Q 016461 239 KNYTL---PDGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPS 312 (389)
Q Consensus 239 ~~~~l---pdg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~ 312 (389)
..+.+ .+|. .+.++.+.|. ..+.+++ .+.+.|.++|+++..+ ....++|+|+||+|++|++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~---------~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~ 361 (394)
T 3qfu_A 293 TRIEIDSFVDGIDLSETLTRAKFEELNLDLFK---------KTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQ 361 (394)
T ss_dssp EEEEEEEEETTEEEEEEEEHHHHHHHHHHHHH---------HTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHH
T ss_pred EEEEEEeccCCceeEEEEEHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHH
Confidence 11111 1232 2344444442 2233333 4677788888776543 445689999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 313 RLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 313 rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
+|++.+... ++..+.+|..++|.||+++|.
T Consensus 362 ~l~~~~~~~------------------~v~~~~~p~~ava~Gaa~~a~ 391 (394)
T 3qfu_A 362 LLESYFDGK------------------KASKGINPDEAVAYGAAVQAG 391 (394)
T ss_dssp HHHHHTTTC------------------CCBCCSCTTTHHHHHHHHHHH
T ss_pred HHHHHcCCC------------------CCCCCcCHHHHHHHHHHHHHH
Confidence 999876322 234455788999999999987
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.85 E-value=3.2e-21 Score=186.50 Aligned_cols=214 Identities=20% Similarity=0.233 Sum_probs=143.4
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCc---------eEEEEEcCCCceEEEEee--CC
Q 016461 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL---------TGLVIDSGDGVTHVVPVV--DG 169 (389)
Q Consensus 101 ~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------tglVVDiG~~~t~v~pv~--dG 169 (389)
...++++.|..++...|+.+.+. ++..+++.+.++++|.||+++++.. +.+|+|+|+++|+++.+. +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 45799999999999999887776 6889999999999999999988753 349999999999998874 44
Q ss_pred ee-cccceeeecccHhHHHHHHHHHHHhc-----CCCCccCc-----hHHHHHHHHHhcceeccChHHHHhhcccCcccc
Q 016461 170 YS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTILV 238 (389)
Q Consensus 170 ~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 238 (389)
.. +.......++||.++++.|.+.+... +.++.... -.+.++++|+.+... ..
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~ 300 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQ 300 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SE
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cc
Confidence 33 22234457999999999998887432 22221100 013444455443211 01
Q ss_pred eeEEC---CCCc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHH
Q 016461 239 KNYTL---PDGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPS 312 (389)
Q Consensus 239 ~~~~l---pdg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~ 312 (389)
..+.+ .+|. .+.++.+.|. ..+.+++ .+.+.|.++|++...+ ....+.|+|+||+|.+|++.+
T Consensus 301 ~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~---------~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~ 369 (404)
T 3i33_A 301 ASIEIDSLYEGVDFYTSITRARFEELNADLFR---------GTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQK 369 (404)
T ss_dssp EEEEEEEEETTEEEEEEEEHHHHHHHTHHHHH---------HTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHH
T ss_pred eEEEEeeccCCceeEEEEcHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHHH
Confidence 11111 1232 2344444442 2233332 4667777777765432 344588999999999999999
Q ss_pred HHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 313 RLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 313 rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
+|++.+... .+..+.+|..+++.||+++|.
T Consensus 370 ~l~~~~~~~------------------~v~~~~~p~~ava~Gaa~~a~ 399 (404)
T 3i33_A 370 LLQDFFNGK------------------ELNKSINPDEAVAYGAAVQAA 399 (404)
T ss_dssp HHHHHTTTC------------------CCBCSSCTTTHHHHHHHHHHH
T ss_pred HHHHHcCCC------------------CCCCCcCHHHHHHHHHHHHHH
Confidence 999876322 233456788999999999997
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.80 E-value=6.2e-19 Score=176.60 Aligned_cols=215 Identities=19% Similarity=0.241 Sum_probs=147.1
Q ss_pred CeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC-------ceEEEEEcCCCceEEEEee--CCee-
Q 016461 102 CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-------LTGLVIDSGDGVTHVVPVV--DGYS- 171 (389)
Q Consensus 102 ~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~tglVVDiG~~~t~v~pv~--dG~~- 171 (389)
..++++.|..++...|+.+.+. ++..|++.+.++++|.||++++|. .+.+|+|+|+++++++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~A-~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKDA-GTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 5799999999999999888774 588999999999999999998864 4689999999999999886 6754
Q ss_pred cccceeeecccHhHHHHHHHHHHHh-----cCCCCccCc-----hHHHHHHHHHhcceeccChHHHHhhcccCcccceeE
Q 016461 172 FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTILVKNY 241 (389)
Q Consensus 172 ~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 241 (389)
+..+....++||.++++.|.+.+.. .+.++.... -.+.++++|+.++... ...+
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~i 282 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QASI 282 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEEE
Confidence 2334456799999999999887753 233332110 1245556666544211 1122
Q ss_pred ECC---CCc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHH
Q 016461 242 TLP---DGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLE 315 (389)
Q Consensus 242 ~lp---dg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~ 315 (389)
.++ +|. .+.++.+.|. ..+.+|+ .+.+.|.++++.... ...-.+.|+|+||+|.+|++.++|+
T Consensus 283 ~i~~~~~g~~~~~~ltr~~~e~l~~~~~~---------~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~ 351 (554)
T 1yuw_A 283 EIDSLYEGIDFYTSITRARFEELNADLFR---------GTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLLQ 351 (554)
T ss_dssp EETTCSSSCCEEEEEEHHHHHHHTHHHHH---------HTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred EEeeccCCceEEEEEEHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHHH
Confidence 222 333 2344444442 2333333 355677777776532 2234588999999999999999988
Q ss_pred HHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCC
Q 016461 316 KEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIM 362 (389)
Q Consensus 316 ~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l 362 (389)
+.+... .+..+.+|..+++.||+++|..+
T Consensus 352 ~~f~~~------------------~v~~~~np~~aVA~Gaa~~a~~l 380 (554)
T 1yuw_A 352 DFFNGK------------------ELNKSINPDEAVAYGAAVQAAIL 380 (554)
T ss_dssp HHTTTC------------------CCBCCSCTTTHHHHHHHHHHHHT
T ss_pred HHcCCC------------------ccccCCCchhHHHHHHHHHHHHh
Confidence 775321 22334578899999999999734
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.78 E-value=3.4e-18 Score=172.87 Aligned_cols=215 Identities=18% Similarity=0.217 Sum_probs=148.2
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC------ceEEEEEcCCCceEEEEee------C
Q 016461 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------LTGLVIDSGDGVTHVVPVV------D 168 (389)
Q Consensus 101 ~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~v~pv~------d 168 (389)
-..++++.|..++...|+.+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+. +
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 357899999999999998887765 77899999999999999998875 3479999999999999886 4
Q ss_pred Cee-cccceeeecccHhHHHHHHHHHHHhc-----CCCCccCc-----hHHHHHHHHHhcceeccChHHHHhhcccCccc
Q 016461 169 GYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (389)
Q Consensus 169 G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~ 237 (389)
|.. +..+....++||.++++.|.+.+..+ +.++.... -.+.++++|+.++...
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~---------------- 277 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ---------------- 277 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------
Confidence 533 22233457899999999998877643 33332110 1245666666654221
Q ss_pred ceeEEC------CCC-c--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCC
Q 016461 238 VKNYTL------PDG-R--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMY 307 (389)
Q Consensus 238 ~~~~~l------pdg-~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i 307 (389)
...+.+ ++| . .+.++.+.|. ..+.+|+ .+.+.|.++|...... ..-.+.|+|+||+|.+
T Consensus 278 ~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~---------~i~~~i~~~L~~a~~~--~~~i~~VvLvGG~sri 346 (605)
T 2kho_A 278 QTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIEPLKVALQDAGLS--VSDIDDVILVGGQTRM 346 (605)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG---------GGTSHHHHHHHTTTCC--TTTCSEEEEESGGGGS
T ss_pred ceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC--hhhCceEEEECCcccC
Confidence 011111 123 1 2355555543 3344443 4777888888876432 2334789999999999
Q ss_pred CChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCC
Q 016461 308 PGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIM 362 (389)
Q Consensus 308 ~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l 362 (389)
|++.++|++.+. . .+..+.+|..+++.||+++|..+
T Consensus 347 p~v~~~l~~~fg-~------------------~~~~~~npd~aVA~GAa~~a~~l 382 (605)
T 2kho_A 347 PMVQKKVAEFFG-K------------------EPRKDVNPDEAVAIGAAVQGGVL 382 (605)
T ss_dssp HHHHHHHHHHHS-S------------------CCBCSSCTTTHHHHHHHHHHTTT
T ss_pred hHHHHHHHHhcC-C------------------CcCcCCCcchHHHHHHHHHHHHh
Confidence 999999988773 1 12234577899999999999844
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.74 E-value=1.7e-17 Score=169.21 Aligned_cols=215 Identities=11% Similarity=0.184 Sum_probs=147.7
Q ss_pred CeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC------------ceEEEEEcCCCceEEEEee--
Q 016461 102 CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------------LTGLVIDSGDGVTHVVPVV-- 167 (389)
Q Consensus 102 ~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~tglVVDiG~~~t~v~pv~-- 167 (389)
..++++.|..++...|+.+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|+++++|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 57999999999999998888755 77999999999999999987642 4589999999999999885
Q ss_pred CCee-cccceeeecccHhHHHHHHHHHHHh-----cCCCCccCc-----hHHHHHHHHHhcceeccChHHHHhhcccCcc
Q 016461 168 DGYS-FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTI 236 (389)
Q Consensus 168 dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~ 236 (389)
+|.. +..+....++||.++++.|.+.+.. .+.++.... -.+.++.+|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 6755 3333446799999999999988753 222221110 0245566666543211
Q ss_pred cceeEECC---CCc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCCh
Q 016461 237 LVKNYTLP---DGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGL 310 (389)
Q Consensus 237 ~~~~~~lp---dg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~ 310 (389)
...+.++ +|. .+.++.+.|. ..+.+++ .+.+.|.++|...... ..-.+.|+|+||+|.+|++
T Consensus 283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~---------~i~~~i~~~L~~a~l~--~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLE---------RVTEPVTKALAQAKLS--AEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHT---------TTTHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHH
T ss_pred -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHhCCC--hhhCcEEEEECCCccChHH
Confidence 1112222 222 3455555543 3444554 4777788887764321 1234789999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCCC
Q 016461 311 PSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMK 363 (389)
Q Consensus 311 ~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~ 363 (389)
.++|++.+. . .+..+.+|..+++.||+++|..|.
T Consensus 351 ~~~l~~~fg-~------------------~~~~~~nPdeaVA~GAa~~a~~ls 384 (675)
T 3d2f_A 351 KQSISEAFG-K------------------PLSTTLNQDEAIAKGAAFICAIHS 384 (675)
T ss_dssp HHHHHHHHT-S------------------CEECCSCTTTHHHHHHHHHHHHTC
T ss_pred HHHHHHhcC-C------------------CccccCCcchHHHHHHHHHHHHhC
Confidence 999988763 1 123355778999999999987443
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.72 E-value=8.6e-18 Score=162.67 Aligned_cols=231 Identities=13% Similarity=0.174 Sum_probs=146.3
Q ss_pred HHHHHHHHhh---hcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCCc--------eE
Q 016461 83 MGQVWDHAFF---SELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL--------TG 151 (389)
Q Consensus 83 ~e~~l~~~~~---~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------tg 151 (389)
+..+++++.. ..++ .....++++.|..++...|+.+.+.+ +..|+..+.++.+|.||+++++.. +.
T Consensus 131 ~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~v 207 (409)
T 4gni_A 131 ATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKII 207 (409)
T ss_dssp HHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEEE
T ss_pred HHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEE
Confidence 3445554442 3333 33467999999999998888877665 778999999999999999999864 48
Q ss_pred EEEEcCCCceEEEEe--eCCeecc-cceeeecccHhHHHHHHHHHHHhcC---CC--CccCchH-------HHHHHHHHh
Q 016461 152 LVIDSGDGVTHVVPV--VDGYSFP-HLTKRMNVAGRHITSYLVDLLSRRG---YS--MNRTADF-------ETVRQIKEK 216 (389)
Q Consensus 152 lVVDiG~~~t~v~pv--~dG~~~~-~~~~~~~~GG~~l~~~l~~~l~~~~---~~--~~~~~~~-------~~~~~ik~~ 216 (389)
+|+|+|+++|+++.+ .+|.... ......++||.++++.|.+.+...- .. .....+. ..++.+|+.
T Consensus 208 lv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ 287 (409)
T 4gni_A 208 VVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRA 287 (409)
T ss_dssp EEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 999999999999885 3442221 1223579999999999988876431 00 1111111 234444444
Q ss_pred cceeccChHHHHhhcccCcccceeEEC---CCCc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhH
Q 016461 217 LCYISYDYKREYQLGLETTILVKNYTL---PDGR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDN 290 (389)
Q Consensus 217 ~~~v~~~~~~~~~~~~~~~~~~~~~~l---pdg~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~ 290 (389)
+... ....+.+ .++. .+.++.+.|. +.+.+++ .+.++|.++|++...
T Consensus 288 ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~i~~~i~~~l~~~~~-- 340 (409)
T 4gni_A 288 LSRS----------------TNASFSVESLIDGLDFASTINRLRYETIARTVFE---------GFNRLVESAVKKAGL-- 340 (409)
T ss_dssp HHHS----------------SEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHH---------HHHHHHHHHHHHTTC--
T ss_pred CCCC----------------CceEEEeecccCCcceEEEeeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC--
Confidence 3210 0111111 1232 2334443332 2233332 466677777776532
Q ss_pred HHHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEE------eCCCCCcceeeehHHHHhc
Q 016461 291 RMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRI------EDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 291 r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~ 360 (389)
.....+.|+|+||+|.+|++.++|++.+... ++| ....+|..++-.||+++|.
T Consensus 341 ~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~-----------------~~v~~P~~~~~~~~p~~ava~GAa~~~~ 399 (409)
T 4gni_A 341 DPLDVDEVIMSGGTSNTPRIAANFRYIFPES-----------------TRILAPSTDPSALNPSELQARGAALQAS 399 (409)
T ss_dssp CGGGCCEEEEESGGGGCHHHHHHHHHHSCTT-----------------SEEESTTTCTTCCCTTTHHHHHHHHHHH
T ss_pred CHHHCCEEEEECCccccHHHHHHHHHHcCCc-----------------cccccccccCCCcCHHHHHHHHHHHHhh
Confidence 2334578999999999999999998776321 233 2345778999999999998
No 18
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.66 E-value=6.7e-16 Score=156.07 Aligned_cols=217 Identities=18% Similarity=0.184 Sum_probs=137.2
Q ss_pred CCeEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC------ceEEEEEcCCCceEEEEeeCCe----
Q 016461 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------LTGLVIDSGDGVTHVVPVVDGY---- 170 (389)
Q Consensus 101 ~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVDiG~~~t~v~pv~dG~---- 170 (389)
-..++++.|..++...|+.+.+.+ +..|++.+.++++|.||++++|. .+-+|+|+|+++++++.+.-+.
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSC
T ss_pred CCeEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCC
Confidence 357899999999999988766654 77999999999999999998864 4579999999999999875332
Q ss_pred --e-cccceeeecccHhHHHHHHHHHHHhc-----CCCCccCc-----hHHHHHHHHHhcceeccChHHHHhhcccCccc
Q 016461 171 --S-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRTA-----DFETVRQIKEKLCYISYDYKREYQLGLETTIL 237 (389)
Q Consensus 171 --~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~ 237 (389)
. +..+.....+||.++++.|.+.+... +.++.... -.+.++.+|..+.... ....
T Consensus 214 ~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~------------~~~i 281 (605)
T 4b9q_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ------------QTDV 281 (605)
T ss_dssp EEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCS------------EEEE
T ss_pred ceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCC------------CeEE
Confidence 1 12223346899999999998877642 22221110 0234445554432110 0000
Q ss_pred ceeEECCC---Cc--EEEECccccc-cccccCCCCCCCCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChH
Q 016461 238 VKNYTLPD---GR--VIKVGTERFQ-APEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLP 311 (389)
Q Consensus 238 ~~~~~lpd---g~--~i~i~~~~~~-~~E~lF~p~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~ 311 (389)
...+...+ +. .+.++.+.|. ..+.+++ .+.+.|.+++...... ..-.+.|+|+||+|.+|++.
T Consensus 282 ~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~---------~i~~~v~~~L~~a~~~--~~~i~~VvLvGG~sriP~v~ 350 (605)
T 4b9q_A 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIEPLKVALQDAGLS--VSDIDDVILVGGQTRMPMVQ 350 (605)
T ss_dssp EEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH---------HTTHHHHHHHHHTTCC--GGGCSEEEEESGGGGSHHHH
T ss_pred EEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC--HHHCcEEEEeCCccCchHHH
Confidence 01111111 11 2344444332 2233333 3556666666654322 22347799999999999999
Q ss_pred HHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 312 SRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 312 ~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
++|++.+..- +..+.+|..++-.||+++|.
T Consensus 351 ~~l~~~fg~~-------------------~~~~~nPdeaVA~GAai~a~ 380 (605)
T 4b9q_A 351 KKVAEFFGKE-------------------PRKDVNPDEAVAIGAAVQGG 380 (605)
T ss_dssp HHHHHHHTSC-------------------CCSSSCTTTHHHHHHHHHHH
T ss_pred HHHHHHhccC-------------------cCCCcChhHHHHHhHHHHHH
Confidence 9998877311 12234678899999999987
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.65 E-value=2.2e-16 Score=149.09 Aligned_cols=180 Identities=17% Similarity=0.095 Sum_probs=129.5
Q ss_pred eEEEeCCCceEEEeecCCCCCccccccceEecCcchhhh-------h-hh----ccCCceEeccccccccCcceeecccc
Q 016461 6 VVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEES-------L-ME----QELKDTIVGAAALDLRHQLDVSYPVN 73 (389)
Q Consensus 6 ~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~-------~-~~----~~~~~~~vg~~~~~~~~~~~~~~p~~ 73 (389)
.|.||+|+.++|+-. ++ .-.+.+||+++......... . .+ ...+.+.+|++|. +|+.
T Consensus 23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~ 91 (346)
T 2fsj_A 23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG 91 (346)
T ss_dssp EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence 689999999999953 33 23567899988754421100 0 00 0123566787665 6899
Q ss_pred CCcccChhhHHHHHHHHhhhcC-CCCCCCCeEE--EecCCCCCHHHHHHHHHHhhhh-------------cCCCeeeeeh
Q 016461 74 NGIVQNWEDMGQVWDHAFFSEL-KIDPPECKIL--LTDPPLNPAKNREKMVETMFEK-------------YNFAGVFIQI 137 (389)
Q Consensus 74 ~g~i~d~~~~e~~l~~~~~~~l-~~~~~~~~vl--l~~~~~~~~~~r~~l~~~lfe~-------------~~~~~v~~~~ 137 (389)
.|.+.+ +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++..+.+++
T Consensus 92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~ 170 (346)
T 2fsj_A 92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP 170 (346)
T ss_dssp TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence 999988 778888888885543 1112345688 9999888777888887775442 2356789999
Q ss_pred hhHHHHhhc--C-----C-ceEEEEEcCCCceEEEEee--CCeecccceeeecccHhHHHHHHHHHHHhc
Q 016461 138 QAVLTLYAQ--G-----L-LTGLVIDSGDGVTHVVPVV--DGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (389)
Q Consensus 138 ~~~~a~~~~--g-----~-~tglVVDiG~~~t~v~pv~--dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (389)
+|.+|++++ + . .+.+|||||+++|+++.+. +|.++.......++||+++++.+.+.++++
T Consensus 171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 999999984 2 1 3459999999999999998 887666656888999999999998887654
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.65 E-value=3.3e-15 Score=142.85 Aligned_cols=171 Identities=15% Similarity=0.180 Sum_probs=110.1
Q ss_pred HHHHHHHhhhhcCCCeeeeehhhHHHHhhcC-------CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHH
Q 016461 117 REKMVETMFEKYNFAGVFIQIQAVLTLYAQG-------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSY 189 (389)
Q Consensus 117 r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~ 189 (389)
.+.+.+ +++..|++...+..+|++++++++ ..+.+|||+|+++|+++.+.+|.++. ....++||.++++.
T Consensus 153 v~~~~~-~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGVLE-ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHHHH-HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHH
Confidence 344444 448899999999999999998864 23469999999999999999998876 67899999999999
Q ss_pred HHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhcccCcccceeEECCCCcEEEECccccc-cccccCCCCCC
Q 016461 190 LVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLPDGRVIKVGTERFQ-APEALFTPELI 268 (389)
Q Consensus 190 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpdg~~i~i~~~~~~-~~E~lF~p~~~ 268 (389)
+.+.+. .+.+.++++|.++++...+...+. ..+.+|+ ..+.++.+.+. +.+.+++
T Consensus 230 i~~~~~---------~~~~~aE~~K~~~~~~~~~~~~~~----------~~i~~~~-~~~~i~~~~~~~~i~~~~~---- 285 (377)
T 2ych_A 230 IARSFN---------LDLLAAEEVKRTYGMATLPTEDEE----------LLLDFDA-ERERYSPGRIYDAIRPVLV---- 285 (377)
T ss_dssp HHHHTT---------CCHHHHHHHHHHTC------------------------------------CHHHHHHHHHH----
T ss_pred HHHHhC---------CCHHHHHHHHhhcccccccccccc----------ccccccc-ccccCCHHHHHHHHHHHHH----
Confidence 887431 346789999998876543211110 0112222 22233322211 1122222
Q ss_pred CCCCCChHHHHHHHHHhCChhHHHHhhcCeEEecCCCCCCChHHHHHHHHH
Q 016461 269 DVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIL 319 (389)
Q Consensus 269 ~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i~G~~~rl~~el~ 319 (389)
.+.+.|.++++.++...+....++|+|+||+|.+||+.+++++.+.
T Consensus 286 -----~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 286 -----ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp -----HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred -----HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 3566667776655445556678899999999999999999999885
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.52 E-value=1.6e-13 Score=132.34 Aligned_cols=175 Identities=14% Similarity=0.169 Sum_probs=119.1
Q ss_pred CHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcCC-----ceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHH
Q 016461 113 PAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-----LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187 (389)
Q Consensus 113 ~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~ 187 (389)
++...+.+.++ ++..+..-..++.+|+||++++.. .+.+|||+|+++|+++.+.+|.+.. ....++||+++|
T Consensus 166 ~~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it 242 (419)
T 4a2a_A 166 PLKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVI 242 (419)
T ss_dssp EHHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHH
T ss_pred eHHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHH
Confidence 34455555555 478899999999999999998865 3689999999999999999999887 678999999999
Q ss_pred HHHHHHHHhcCCCCccCchHHHHHHHHHhcceeccChHHHHhhcccCcccceeEECC--CC-cEEEECcccc-ccccccC
Q 016461 188 SYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYTLP--DG-RVIKVGTERF-QAPEALF 263 (389)
Q Consensus 188 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp--dg-~~i~i~~~~~-~~~E~lF 263 (389)
+.+...+. .+.+.++.+|.++.....+. .....+.+| +| ....++.+.+ .+.+..+
T Consensus 243 ~dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v 302 (419)
T 4a2a_A 243 KDVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL 302 (419)
T ss_dssp HHHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHH
Confidence 99988764 35789999998876432111 011112222 11 1233433222 2222222
Q ss_pred CCCCCCCCCCChHHHHHHHHHhCCh---hH-HHHhhcCeEEecCCCCCCChHHHHHHHHH
Q 016461 264 TPELIDVEGDGMADMVFRCIQEMDI---DN-RMMLYQHIVLSGGSTMYPGLPSRLEKEIL 319 (389)
Q Consensus 264 ~p~~~~~~~~~l~~~i~~~i~~~~~---d~-r~~l~~nIvl~GG~s~i~G~~~rl~~el~ 319 (389)
+ .+.+.|.+.|+.... +. .....+.|+||||+|++||+.+.+++.+.
T Consensus 303 e---------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g 353 (419)
T 4a2a_A 303 R---------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK 353 (419)
T ss_dssp H---------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT
T ss_pred H---------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC
Confidence 2 355667777766432 11 34567889999999999999999998875
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.36 E-value=8.2e-13 Score=123.62 Aligned_cols=186 Identities=15% Similarity=0.070 Sum_probs=118.7
Q ss_pred CCCCCeEEEeCCCceEEEeec--C---CCCCccccccceEecCcchhhh-----hhhccCCceEeccccccccCcceeec
Q 016461 1 MDNRNVVVCDNGTGYVKCGFA--G---ENFPNSVFPCVVGRPMLRYEES-----LMEQELKDTIVGAAALDLRHQLDVSY 70 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~a--g---~~~P~~~~ps~~~~~~~~~~~~-----~~~~~~~~~~vg~~~~~~~~~~~~~~ 70 (389)
|++.-.|.||+|-.++|+-.. + +..-+..|||.++......... .-..+.+.+++|+.+...
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------- 75 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------- 75 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------
T ss_pred ccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------
Confidence 455567999999999999653 2 1223467899987654321100 001234568888866421
Q ss_pred cccCCcccChhhHHHHHHHHhhhcCCCCC-CCCeEEEecCCCCC--HHHHHHHHHHhhhh-------------cCCCeee
Q 016461 71 PVNNGIVQNWEDMGQVWDHAFFSELKIDP-PECKILLTDPPLNP--AKNREKMVETMFEK-------------YNFAGVF 134 (389)
Q Consensus 71 p~~~g~i~d~~~~e~~l~~~~~~~l~~~~-~~~~vll~~~~~~~--~~~r~~l~~~lfe~-------------~~~~~v~ 134 (389)
-..... +-+....++..++.+.+.... .+..+++..|...- .+.|+++.+.+-.. +.+..+.
T Consensus 76 ~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~ 153 (329)
T 4apw_A 76 SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDIT 153 (329)
T ss_dssp SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEE
T ss_pred cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEE
Confidence 011111 223455555566534443321 22345555554322 23466666665421 2245788
Q ss_pred eehhhHHHHhhcC----CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHh
Q 016461 135 IQIQAVLTLYAQG----LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSR 196 (389)
Q Consensus 135 ~~~~~~~a~~~~g----~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~ 196 (389)
+.|++..|++... ..+.+|||||+++|+++.+.+|.++...+...++||.++++.+.+.+++
T Consensus 154 v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 154 IKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 9999999998762 3677999999999999999999998766778999999999999988876
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.35 E-value=5e-12 Score=118.00 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=67.1
Q ss_pred hhcCCCeeeeehhhHHHHhhcC-----CceEEEEEcCCCceEEEEeeCCee-cccceeeecccHhHHHHHHHHHHHhcCC
Q 016461 126 EKYNFAGVFIQIQAVLTLYAQG-----LLTGLVIDSGDGVTHVVPVVDGYS-FPHLTKRMNVAGRHITSYLVDLLSRRGY 199 (389)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~g-----~~tglVVDiG~~~t~v~pv~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~ 199 (389)
+.+++..+.+++++.+|+++++ ..+.+|||||+++|+++.+.+|.+ +..+....++||.++++.+.+.+.+++.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 3455678899999999998763 357899999999999999999876 4444567899999999999999876532
Q ss_pred CCccCchHHHHHHH-HHh
Q 016461 200 SMNRTADFETVRQI-KEK 216 (389)
Q Consensus 200 ~~~~~~~~~~~~~i-k~~ 216 (389)
. .+.+.++++ |..
T Consensus 216 ~----i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 216 K----GSSYLADDIIIHR 229 (320)
T ss_dssp G----GGHHHHHHHHHTT
T ss_pred C----CCHHHHHHHHHHh
Confidence 2 345566666 544
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.26 E-value=1.8e-11 Score=115.47 Aligned_cols=191 Identities=17% Similarity=0.143 Sum_probs=120.8
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCccccccceEecCcchh--hhh--h---------hccCCc-eEeccccccccCcc
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE--ESL--M---------EQELKD-TIVGAAALDLRHQL 66 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--~~~--~---------~~~~~~-~~vg~~~~~~~~~~ 66 (389)
|...-.|-||+|-.++|+ ..++ =.+.|||.++....... ... + ..+... +++|+.|......
T Consensus 1 m~~~~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~- 76 (355)
T 3js6_A 1 MSNVYVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT- 76 (355)
T ss_dssp -CCEEEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC-
T ss_pred CCccEEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc-
Confidence 666678999999999996 4444 25789999886433211 000 0 012335 8899887542111
Q ss_pred eeeccc-cCCcccChhhHHHHHHHHhhh---cCCCCCCCCeEEEecCCCCCHHHH-HHHHHHhhhh-----------cCC
Q 016461 67 DVSYPV-NNGIVQNWEDMGQVWDHAFFS---ELKIDPPECKILLTDPPLNPAKNR-EKMVETMFEK-----------YNF 130 (389)
Q Consensus 67 ~~~~p~-~~g~i~d~~~~e~~l~~~~~~---~l~~~~~~~~vll~~~~~~~~~~r-~~l~~~lfe~-----------~~~ 130 (389)
..+.. ......+ +....++..++.. .+..+..+-.+++..|.......| +++.+.+... +.+
T Consensus 77 -~~~~~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I 154 (355)
T 3js6_A 77 -GKDTASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINV 154 (355)
T ss_dssp -CEECCCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEE
T ss_pred -cccccccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEE
Confidence 11222 2333322 3333344344421 121111123566777766554555 4677766432 223
Q ss_pred CeeeeehhhHHHHhhcC-----------CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhc
Q 016461 131 AGVFIQIQAVLTLYAQG-----------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (389)
Q Consensus 131 ~~v~~~~~~~~a~~~~g-----------~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (389)
..|.+++++.+|+++++ ..+.+|||||+++|.++.+.+|.+....+...++||..+++.+.+.++++
T Consensus 155 ~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 155 KGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 68999999999999875 35679999999999999999999998778889999999999999999875
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.46 E-value=1.4e-06 Score=83.95 Aligned_cols=74 Identities=16% Similarity=0.101 Sum_probs=62.1
Q ss_pred hhhHHHHhhcCC-----ceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHH
Q 016461 137 IQAVLTLYAQGL-----LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (389)
Q Consensus 137 ~~~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (389)
-++++|.+++-. ...++||+|+++|+++.+.+|..+. ...+++||+++|..+..-|.- .+.+.+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~~Lgt--------~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIARELGL--------EDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHHHHHTC--------CCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 677888877743 4579999999999999999999988 788999999999999988862 2489999
Q ss_pred HHHHhcceec
Q 016461 212 QIKEKLCYIS 221 (389)
Q Consensus 212 ~ik~~~~~v~ 221 (389)
++|. +....
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 76554
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.41 E-value=7.4e-07 Score=86.12 Aligned_cols=74 Identities=16% Similarity=0.161 Sum_probs=62.1
Q ss_pred hhhHHHHhhcCC-----ceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHHHHHHHHHHHhcCCCCccCchHHHHH
Q 016461 137 IQAVLTLYAQGL-----LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (389)
Q Consensus 137 ~~~~~a~~~~g~-----~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (389)
-++++|.+++-. ...++||+|+++|+++.+.+|..+. ...+++||+++|..+..-|.- .+.+.+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~--------~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGL--------EDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTC--------SCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 677888877743 4579999999999999999999988 788999999999999988862 2489999
Q ss_pred HHHHhcceec
Q 016461 212 QIKEKLCYIS 221 (389)
Q Consensus 212 ~ik~~~~~v~ 221 (389)
++|. +....
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 76554
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.92 E-value=0.00012 Score=66.10 Aligned_cols=51 Identities=25% Similarity=0.321 Sum_probs=39.9
Q ss_pred HHHhhcCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 291 RMMLYQHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 291 r~~l~~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
+....+.|+|+||.|..|+++++|++.+. .++..|++|.+..-.||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g-------------------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREIN-------------------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHT-------------------SCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHC-------------------CCeeeCCCcchHHHHHHHHHHH
Confidence 34445789999999999999999886652 1345567788888899999985
No 28
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=96.84 E-value=0.007 Score=54.31 Aligned_cols=46 Identities=26% Similarity=0.341 Sum_probs=36.3
Q ss_pred cCeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 296 QHIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 296 ~nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
+.|+++||.++-+++.+.+.+.|.. .|..++.+.+..-.||+++|.
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~-------------------~v~~p~~~~~~~AlGAAl~A~ 255 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV-------------------EIKTSPLAQYNGALGAALYAY 255 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS-------------------CEECCGGGGGHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC-------------------CeEeCCCcchHhHHHHHHHHH
Confidence 5799999999999999988877631 234455667778999999987
No 29
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.48 E-value=0.0093 Score=54.71 Aligned_cols=75 Identities=16% Similarity=0.070 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhhhhcCCCeeeeeh---hhHHHHh----hcC-CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhH
Q 016461 114 AKNREKMVETMFEKYNFAGVFIQI---QAVLTLY----AQG-LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRH 185 (389)
Q Consensus 114 ~~~r~~l~~~lfe~~~~~~v~~~~---~~~~a~~----~~g-~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~ 185 (389)
..+++.+++.+-+..|++- -++. ++.++.. +.+ ..+++|||||+++|.++-..+|.+.. ....++|+-.
T Consensus 96 A~N~~~fl~~v~~~~G~~i-~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~~G~v~ 172 (315)
T 1t6c_A 96 AKNAEEFLERVKREVGLVV-EVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE--VISLPIGIVN 172 (315)
T ss_dssp STTHHHHHHHHHHHTCCCE-EECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE--EEEECCCHHH
T ss_pred CcCHHHHHHHHHHHHCCCE-EEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee--EEEEeccHHH
Confidence 3456677777777777753 3332 3333222 234 56899999999999999999998865 6789999998
Q ss_pred HHHHHH
Q 016461 186 ITSYLV 191 (389)
Q Consensus 186 l~~~l~ 191 (389)
+++.+.
T Consensus 173 l~e~~~ 178 (315)
T 1t6c_A 173 LTETFF 178 (315)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 888753
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.33 E-value=0.23 Score=45.40 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=37.2
Q ss_pred hhhhc-CCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 124 MFEKY-NFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 124 lfe~~-~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+=+.+ ++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.||.++.
T Consensus 113 l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 113 LRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 33557 777 78999999887642 4578999999987 6677788998876
No 31
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.26 E-value=0.0058 Score=56.11 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=51.3
Q ss_pred HHHHHHHHHhhhhcCCCeeee--ehhhHHHHh----hcC--CceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHH
Q 016461 115 KNREKMVETMFEKYNFAGVFI--QIQAVLTLY----AQG--LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (389)
Q Consensus 115 ~~r~~l~~~lfe~~~~~~v~~--~~~~~~a~~----~~g--~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 186 (389)
.+++.+++.+-+.+|++-=.+ -.++-++.+ +.. ..+++|||||+++|.++-+.++.+.. ....++|.-.+
T Consensus 89 ~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 166 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQRL 166 (315)
T ss_dssp TTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhHH
Confidence 445567777777777653222 233333222 222 35799999999999999999998876 77899999877
Q ss_pred HHHH
Q 016461 187 TSYL 190 (389)
Q Consensus 187 ~~~l 190 (389)
++.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7654
No 32
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.98 E-value=0.66 Score=42.28 Aligned_cols=49 Identities=14% Similarity=0.123 Sum_probs=37.8
Q ss_pred HhhhhcCCCeeeeehhhHHHHhh-------cCCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 123 TMFEKYNFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 123 ~lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
.+=+.+++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.||.+..
T Consensus 91 ~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 91 KVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 333556887 8899999988875 24578999999987 6677788998876
No 33
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=95.97 E-value=0.083 Score=47.60 Aligned_cols=52 Identities=15% Similarity=0.216 Sum_probs=41.8
Q ss_pred HHHHHhhhhcCCCeeeeehhhHHHHhhc-----CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 119 KMVETMFEKYNFAGVFIQIQAVLTLYAQ-----GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 119 ~l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
.+.+.+ +.+++| +++.++.-+++++- +..+.++|-+|.+ +-..-|.||.+..
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 142 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR 142 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence 456777 888988 78999999998873 5678999999986 5567778998765
No 34
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=95.92 E-value=0.024 Score=55.62 Aligned_cols=73 Identities=18% Similarity=0.078 Sum_probs=51.6
Q ss_pred HHHHHHHHHhhhhcCCCeeeeeh---hhHHHHhh----cCC-ceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHH
Q 016461 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLYA----QGL-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (389)
Q Consensus 115 ~~r~~l~~~lfe~~~~~~v~~~~---~~~~a~~~----~g~-~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 186 (389)
.+++.+++-+-+..|++- -++. ++-++..| ... ..++|||||+++|.++-..++.+.. ..+.++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPIL--VESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEEE--EEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeeeE--EEEEeccHHHH
Confidence 455677777778788753 2332 33333322 222 3799999999999999998888765 67899999888
Q ss_pred HHHH
Q 016461 187 TSYL 190 (389)
Q Consensus 187 ~~~l 190 (389)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 35
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.79 E-value=0.024 Score=52.65 Aligned_cols=76 Identities=21% Similarity=0.159 Sum_probs=50.1
Q ss_pred HHHHHHHHHhhhhcCCCe--eeeehhhHHHHhhc----C----CceEEEEEcCCCceEEEEeeC--Ceec--ccceeeec
Q 016461 115 KNREKMVETMFEKYNFAG--VFIQIQAVLTLYAQ----G----LLTGLVIDSGDGVTHVVPVVD--GYSF--PHLTKRMN 180 (389)
Q Consensus 115 ~~r~~l~~~lfe~~~~~~--v~~~~~~~~a~~~~----g----~~tglVVDiG~~~t~v~pv~d--G~~~--~~~~~~~~ 180 (389)
.+++.+++-+-+.+|++- +.=-.++.++..+. . ..+++|||||+++|.++-+.+ +.+. ......+|
T Consensus 102 ~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Slp 181 (343)
T 3cer_A 102 ENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMN 181 (343)
T ss_dssp TTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEES
T ss_pred cCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEEe
Confidence 445567777767677642 22223444444433 2 256999999999999998877 4331 11367899
Q ss_pred ccHhHHHHHH
Q 016461 181 VAGRHITSYL 190 (389)
Q Consensus 181 ~GG~~l~~~l 190 (389)
+|+..+++.+
T Consensus 182 lG~v~lt~~~ 191 (343)
T 3cer_A 182 IGSVRMTERH 191 (343)
T ss_dssp CCHHHHHHHT
T ss_pred hhHHHHHHHh
Confidence 9999998875
No 36
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.61 E-value=0.14 Score=46.71 Aligned_cols=46 Identities=13% Similarity=0.078 Sum_probs=36.3
Q ss_pred hhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 126 EKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+.+++| +++.++.-+++++- +..+.++|-+|.+ +-..-+.||.+..
T Consensus 106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 446777 78999999988752 4578999999988 5677788998776
No 37
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.57 E-value=0.25 Score=45.36 Aligned_cols=51 Identities=16% Similarity=0.053 Sum_probs=38.0
Q ss_pred HHhhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 122 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.||.+...
T Consensus 114 ~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 114 ADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 3344567888 88999999888753 3578899999987 56667789987753
No 38
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.99 E-value=1.9 Score=38.68 Aligned_cols=48 Identities=21% Similarity=0.123 Sum_probs=36.1
Q ss_pred hhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 124 MFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+=+.+++| |++.++.-+++++- +..+.++|-+|.+ .-..-|.||.++.
T Consensus 93 l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 147 (297)
T 4htl_A 93 LEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIFSNGELVR 147 (297)
T ss_dssp HHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEEECCEEEe
Confidence 33557888 88999988887643 4578999999976 4566678998876
No 39
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.97 E-value=0.2 Score=48.94 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhhhhcCCCeeeee---hhhHHHHh----hcCCceEEEEEcCCCceEEEEeeCCeecccceeeecccHhHH
Q 016461 114 AKNREKMVETMFEKYNFAGVFIQ---IQAVLTLY----AQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (389)
Q Consensus 114 ~~~r~~l~~~lfe~~~~~~v~~~---~~~~~a~~----~~g~~tglVVDiG~~~t~v~pv~dG~~~~~~~~~~~~GG~~l 186 (389)
..+...+++-+-+.+|++- .++ .++-++.. +.....++|||||+++|.++-+.+|.+.. ..+.++|.-.+
T Consensus 99 A~N~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl 175 (508)
T 3hi0_A 99 AENGPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRL 175 (508)
T ss_dssp STTHHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHH
T ss_pred CcCHHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEeh
Confidence 3455667777777777763 233 33333333 23345789999999999999999998876 77899999877
Q ss_pred HHH
Q 016461 187 TSY 189 (389)
Q Consensus 187 ~~~ 189 (389)
++.
T Consensus 176 ~e~ 178 (508)
T 3hi0_A 176 SEQ 178 (508)
T ss_dssp HHH
T ss_pred hhc
Confidence 764
No 40
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=94.57 E-value=0.86 Score=41.13 Aligned_cols=51 Identities=20% Similarity=0.172 Sum_probs=36.7
Q ss_pred HHhhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 122 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+-+.+++| |++.++.-+++++- +..+.++|-+|.+ .-..-|.||.+...
T Consensus 92 ~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G 149 (302)
T 3vov_A 92 RILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence 3334557787 77999988887643 4578999999987 45556778887753
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=94.05 E-value=0.18 Score=45.38 Aligned_cols=50 Identities=16% Similarity=0.011 Sum_probs=39.7
Q ss_pred hcCeEEecC-CCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 295 YQHIVLSGG-STMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 295 ~~nIvl~GG-~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
.++|+++|| .+..|++.++|.+.+... ..++..++++++..-+||+++++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~----------------~~~~~~p~~~~~~gAlGAaL~~~ 287 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR----------------GCKPYYVENGAFSGAIGALYLEK 287 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT----------------TCEEEECTTGGGHHHHHHHHTCC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC----------------CceEEECCCccHHHHHHHHHhCC
Confidence 357999999 999999999999766533 23566677889999999998763
No 42
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=93.99 E-value=0.8 Score=40.87 Aligned_cols=49 Identities=14% Similarity=0.011 Sum_probs=37.0
Q ss_pred HHhhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 122 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+.+=+.+++| +++.++.-+++++- +. +.++|.+|.+ .-..-|.||.+..
T Consensus 90 ~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 90 KTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred HHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 3333456777 78999999888753 34 8999999988 5677788998775
No 43
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=93.75 E-value=1.1 Score=41.08 Aligned_cols=46 Identities=13% Similarity=0.138 Sum_probs=35.3
Q ss_pred hhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 126 EKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+.+++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.||.+..
T Consensus 129 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~ 181 (343)
T 2yhw_A 129 DTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIH 181 (343)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEec
Confidence 446777 78999998887753 4578999999987 5677788988765
No 44
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=92.72 E-value=0.35 Score=44.81 Aligned_cols=56 Identities=11% Similarity=-0.098 Sum_probs=41.0
Q ss_pred HHHhhcCeEEecC-CCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHh
Q 016461 291 RMMLYQHIVLSGG-STMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLA 359 (389)
Q Consensus 291 r~~l~~nIvl~GG-~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 359 (389)
++.=.++|+++|| .+..|++.+.|++.|.-- .. ..+++..+..+++..-+||++.+
T Consensus 302 ~~~~i~~IvftGgfla~n~~~~~~L~~~l~~w--------s~-----g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 302 LNENIDRVVFVGNFLRINMVSMKLLAYAMDFW--------SK-----GQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHTCCCEEEESGGGCSSSHHHHHHHHHHHHH--------TT-----TSCCEEEETTTTCHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcccccCHHHHHHHHHHHhhh--------hc-----CCeeEEEcCCccHHHHHHHHHHh
Confidence 3444468999999 999999999999988643 01 12344445567899999999875
No 45
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=92.27 E-value=0.12 Score=47.21 Aligned_cols=25 Identities=24% Similarity=0.567 Sum_probs=23.6
Q ss_pred ceEEEEEcCCCceEEEEeeCCeecc
Q 016461 149 LTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 149 ~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
.++++||||+.+|+|+|+.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5899999999999999999999976
No 46
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=91.46 E-value=1.3 Score=40.36 Aligned_cols=47 Identities=13% Similarity=0.037 Sum_probs=36.1
Q ss_pred hhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 126 EKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+++| +++.++.-+++++- +..+.++|-+|.+ .-..-|.+|.+...
T Consensus 118 ~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 118 ARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 446777 88999999988752 3578899999987 55677889987763
No 47
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=91.45 E-value=2.5 Score=37.38 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=16.7
Q ss_pred eEEEeCCCceEEEeecCCC
Q 016461 6 VVVCDNGTGYVKCGFAGEN 24 (389)
Q Consensus 6 ~iiiD~Gs~~ik~G~ag~~ 24 (389)
.++||+|-+++|+|+..+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6999999999999998553
No 48
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=90.04 E-value=2.3 Score=37.59 Aligned_cols=19 Identities=26% Similarity=0.295 Sum_probs=16.0
Q ss_pred eEEEeCCCceEEEeecCCC
Q 016461 6 VVVCDNGTGYVKCGFAGEN 24 (389)
Q Consensus 6 ~iiiD~Gs~~ik~G~ag~~ 24 (389)
.++||+|-+++|+|+..+.
T Consensus 2 lL~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECcCcEEEEEEECC
Confidence 4789999999999988543
No 49
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=86.76 E-value=5.8 Score=35.52 Aligned_cols=87 Identities=16% Similarity=0.194 Sum_probs=52.2
Q ss_pred hhhHHHHHHHHhhhcCCCCCCCC---eEEEecCCCCCHHHHHHHHHHhhhhc--CCCeeeeehhhHHHHhhc-CCceEEE
Q 016461 80 WEDMGQVWDHAFFSELKIDPPEC---KILLTDPPLNPAKNREKMVETMFEKY--NFAGVFIQIQAVLTLYAQ-GLLTGLV 153 (389)
Q Consensus 80 ~~~~e~~l~~~~~~~l~~~~~~~---~vll~~~~~~~~~~r~~l~~~lfe~~--~~~~v~~~~~~~~a~~~~-g~~tglV 153 (389)
++.+.+.++.++ +..+.+..+. .+-+..|-.........+ + +.+ +. .+++.++.-+++++. +..++++
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~l-~---~~~~~~~-pv~v~NDa~aaa~ge~~~~~~v~ 126 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEF-E---SQAPGFA-RLSLATDGYTTLLGAHGGQPGII 126 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHH-H---HTCCCCS-EEEEECHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHHH-H---HhCCCCc-eEEEECCHHHHHHhhcCCCCeEE
Confidence 455666666666 4444444442 456666654433322222 2 234 34 488999999999884 5678999
Q ss_pred EEcCCCceEEEEeeCCeec
Q 016461 154 IDSGDGVTHVVPVVDGYSF 172 (389)
Q Consensus 154 VDiG~~~t~v~pv~dG~~~ 172 (389)
|-+|.+..-..-+.||...
T Consensus 127 v~~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 127 VALGTGSIGEALYPDGSHR 145 (305)
T ss_dssp EEESSSEEEEEECTTSCEE
T ss_pred EEecCCeEEEEEeCCCcEE
Confidence 9999887433333488754
No 50
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=85.16 E-value=9.3 Score=33.89 Aligned_cols=69 Identities=9% Similarity=-0.024 Sum_probs=47.0
Q ss_pred eEEEecCCCCCHHHHHHHHHHhhhhcCC-CeeeeehhhHHHHhh-cCCceEEEEEcCCCceEEEEeeCCeec
Q 016461 103 KILLTDPPLNPAKNREKMVETMFEKYNF-AGVFIQIQAVLTLYA-QGLLTGLVIDSGDGVTHVVPVVDGYSF 172 (389)
Q Consensus 103 ~vll~~~~~~~~~~r~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~tglVVDiG~~~t~v~pv~dG~~~ 172 (389)
.+-+..|-.. ......+.+.+=+.+++ ..+.+.+++-+++++ .+..++++|=+|.+.--..-+.||...
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 4555555544 22223455555456665 358999999999998 577888888898887555556788875
No 51
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=84.14 E-value=15 Score=33.24 Aligned_cols=91 Identities=16% Similarity=0.176 Sum_probs=55.8
Q ss_pred hhhHHHHHHHHhhhcCCCCCC--CCeEEEecCCCCCHHHHHHHHHHhhhhcC--CCeeeeehhhHHHHhhcCCceEEEEE
Q 016461 80 WEDMGQVWDHAFFSELKIDPP--ECKILLTDPPLNPAKNREKMVETMFEKYN--FAGVFIQIQAVLTLYAQGLLTGLVID 155 (389)
Q Consensus 80 ~~~~e~~l~~~~~~~l~~~~~--~~~vll~~~~~~~~~~r~~l~~~lfe~~~--~~~v~~~~~~~~a~~~~g~~tglVVD 155 (389)
++.+.+.++.++ +..+.+.. -..+-+..|-.........+.+.+=+.++ .--+.+.++.-+++++....++++|-
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~~~~~~v~v~ 127 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATATPDGGVVLI 127 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhhCCCCcEEEE
Confidence 455666666666 33344332 24566777776655544455555555665 22478999999998886446788999
Q ss_pred cCCCceEEEEeeCCee
Q 016461 156 SGDGVTHVVPVVDGYS 171 (389)
Q Consensus 156 iG~~~t~v~pv~dG~~ 171 (389)
+|.+.-......+|..
T Consensus 128 ~GTGig~~~v~~~G~~ 143 (347)
T 2ch5_A 128 SGTGSNCRLINPDGSE 143 (347)
T ss_dssp ESSSEEEEEECTTSCE
T ss_pred EcCCceeEEEcCCCCE
Confidence 9887644332236644
No 52
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=80.98 E-value=21 Score=30.89 Aligned_cols=25 Identities=28% Similarity=0.287 Sum_probs=18.8
Q ss_pred CceEEEEEcCCCceEEEEeeCCeecc
Q 016461 148 LLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 148 ~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
....+|||+|...|--+. .+|..+-
T Consensus 121 ~~~~iVvD~GTA~T~d~v-~~g~~lG 145 (249)
T 3bex_A 121 GKNGIIIDMGTATTVDLV-VNGSYEG 145 (249)
T ss_dssp CSCEEEEEESSEEEEEEE-ETTEEEE
T ss_pred CCCEEEEEcCCceEEEEE-eCCeEee
Confidence 368999999998776555 7776554
No 53
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=75.80 E-value=39 Score=29.70 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=36.4
Q ss_pred eEEEecCCCCCHHHHHHHHHHhhhhcCCCeeeeehhhHHHHhhcC-CceEEEEEcCCC
Q 016461 103 KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG-LLTGLVIDSGDG 159 (389)
Q Consensus 103 ~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVDiG~~ 159 (389)
.+-+..|-..+......+.+.+=+ ++.| +++.++.-+++++-. ..+.++|-+|.+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG 117 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTG 117 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSS
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCC
Confidence 455666655433333344444434 6654 778899998888753 578999999998
No 54
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=68.03 E-value=5.6 Score=36.69 Aligned_cols=101 Identities=11% Similarity=0.057 Sum_probs=53.6
Q ss_pred hhhHHHHHHHHhhhcCCCCCCCCeEEEecCCC---CCHHHHHHHHHHhhhhc-------CCCeeeeeh---hhHH----H
Q 016461 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPL---NPAKNREKMVETMFEKY-------NFAGVFIQI---QAVL----T 142 (389)
Q Consensus 80 ~~~~e~~l~~~~~~~l~~~~~~~~vll~~~~~---~~~~~r~~l~~~lfe~~-------~~~~v~~~~---~~~~----a 142 (389)
.+.+++.++ -|.+ + -.....++.++-... .+...++.+++.+-+.+ +. .+.++. ++.+ +
T Consensus 52 ~~~~~~~l~-~f~~-~-~~~~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv 127 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-D-APIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAV 127 (353)
T ss_dssp HHHHHHHHH-HHHT-T-CSCCSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-H-HhcCCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHH
Confidence 455666665 3323 1 112234555543321 23334666666665555 22 233333 3333 3
Q ss_pred HhhcC------CceEEEEEcCCCceEEEEeeC--CeecccceeeecccHh
Q 016461 143 LYAQG------LLTGLVIDSGDGVTHVVPVVD--GYSFPHLTKRMNVAGR 184 (389)
Q Consensus 143 ~~~~g------~~tglVVDiG~~~t~v~pv~d--G~~~~~~~~~~~~GG~ 184 (389)
.|..+ ..+.+|||||+++|.++-..+ +.+.......+++||.
T Consensus 128 ~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 128 NYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp HHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred HHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 34444 246999999999999997754 3444433466777764
No 55
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=61.49 E-value=38 Score=31.29 Aligned_cols=72 Identities=15% Similarity=0.064 Sum_probs=43.6
Q ss_pred CeEEecCCCCCCC-hHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhcCCCCCCccc-----c
Q 016461 297 HIVLSGGSTMYPG-LPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFW-----I 370 (389)
Q Consensus 297 nIvl~GG~s~i~G-~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~~l~~~~~~~-----i 370 (389)
.|||+||.+...- |.+++++.+... ..+.|........+.-.||+.++...... ..| -
T Consensus 298 ~IvlgGgi~~~~~~l~~~i~~~l~~~---------------~~~~i~~~~~~~~a~~~GAa~l~~~~~~~-~~~~~~~~~ 361 (381)
T 1saz_A 298 FIVLTGGLAHEKEFLVPWITKRVSFI---------------APVLVFPGSNEEKALALSALRVLRGEEKP-KNYSEESRR 361 (381)
T ss_dssp EEEEEEGGGGCTTTHHHHHHHHHTTT---------------SCEEEEEBCCHHHHHHHHHHHHHTTSSCC-EEHHHHHHH
T ss_pred EEEEeCcCccChHHHHHHHHHHHHhh---------------cCeEEEecCcchhHHHHHHHHHHcCCccc-ccchhHhHH
Confidence 4999999887655 788888877654 13455544333456778998887622211 101 1
Q ss_pred cHHHHhhcCccccc
Q 016461 371 SRDDYLEEGIACLS 384 (389)
Q Consensus 371 tr~ey~e~G~~~l~ 384 (389)
-|+-|+.++.-|++
T Consensus 362 ~~~~~~~~~~~~~~ 375 (381)
T 1saz_A 362 WRERYDSYLDGILR 375 (381)
T ss_dssp HHHHHHHHTGGGCC
T ss_pred HHHHHHhhhhhhhh
Confidence 25566666666654
No 56
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=59.13 E-value=19 Score=31.79 Aligned_cols=55 Identities=7% Similarity=0.016 Sum_probs=39.2
Q ss_pred HHHHHhhhhcCC-CeeeeehhhHHHHhhc-CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 119 KMVETMFEKYNF-AGVFIQIQAVLTLYAQ-GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 119 ~l~~~lfe~~~~-~~v~~~~~~~~a~~~~-g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
.+.+.+=+.++. ..+.+.++.-+++++- |..++++|=+|.+..-..-+.||....
T Consensus 75 ~l~~~l~~~~~~~~pv~v~NDa~~aalge~g~~~~v~v~~GTGi~g~gi~~~G~~~~ 131 (291)
T 1zxo_A 75 VLRRAIADSLPVIGNIKANSDMLAAAHGLCGQKAGIACILGTGSNSCFYNGKEIVSN 131 (291)
T ss_dssp HHHHHHHHHSCCCSCCEEECSHHHHHHHTTTTSCBEEEEESSSEEEEEECSSSEEEE
T ss_pred HHHHHHHHhcCCCceEEEECcHHHHHHhhcCCCCcEEEEeCCChheEEECCCCcEEE
Confidence 344444455664 2488999999999964 677888888998875455567887753
No 57
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=56.91 E-value=45 Score=30.64 Aligned_cols=49 Identities=20% Similarity=0.225 Sum_probs=36.7
Q ss_pred hhhhcCCCeeeeehhhHHHHhhc---C--CceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 124 MFEKYNFAGVFIQIQAVLTLYAQ---G--LLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~~---g--~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+=+.+++| +++.+++-+++++- | ..+.++|-+|.+ .-..-|.||.+...
T Consensus 184 l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 184 LKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 33456777 88999999887753 3 378999999987 45777789987763
No 58
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=46.27 E-value=1.2e+02 Score=26.83 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=37.3
Q ss_pred HHHHhhhhcCCCeeeeehhhHHHHhh------cCCceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 120 MVETMFEKYNFAGVFIQIQAVLTLYA------QGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 120 l~~~lfe~~~~~~v~~~~~~~~a~~~------~g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+.+=+.+++| |++.++.-+++++ .+..+.+.|-+|.+ .-..-|.||.++..
T Consensus 99 l~~~l~~~~~~p-v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtG-iG~gii~~G~l~~G 157 (310)
T 3htv_A 99 LADKLENTLNCP-VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTG-MGFAVWMNGAPWTG 157 (310)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHHhCCC-EEEeeHHHHHHHHHHhhcccCCceEEEEEecee-EEEEEEECCEEeec
Confidence 444555667887 7888888887752 24467888999875 45566789988764
No 59
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.17 E-value=12 Score=33.57 Aligned_cols=51 Identities=20% Similarity=0.255 Sum_probs=37.6
Q ss_pred HHhhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeeccc
Q 016461 122 ETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 122 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+=+.+++| |++.+++-+++++- +..+.+.|-+|.+ .-..-|.||.++..
T Consensus 91 ~~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 148 (302)
T 3epq_A 91 QTVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQG 148 (302)
T ss_dssp HHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCS
T ss_pred HHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEccc
Confidence 3333557888 88999998887643 4578999999975 45666789988874
No 60
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=41.56 E-value=1.2e+02 Score=25.54 Aligned_cols=46 Identities=17% Similarity=0.152 Sum_probs=35.2
Q ss_pred hhcCCCeeeeehhhHHHHhhcCC-ceEEEEEcCCCceEEEEeeCCeecc
Q 016461 126 EKYNFAGVFIQIQAVLTLYAQGL-LTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 126 e~~~~~~v~~~~~~~~a~~~~g~-~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+.+++| +++.+++-+++++-.. .+.++|-+|.+ .-..-|.||.++.
T Consensus 89 ~~~~~p-v~v~NDanaaalge~~~~~~~~l~~GtG-iG~gii~~G~l~~ 135 (226)
T 3lm2_A 89 GAFGRP-VRIVNDALMQAIGSYNGGRMLFLGLGTG-LGAAMIVENVAQP 135 (226)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHCCSSEEEEEEESSS-EEEEEEETTEEEE
T ss_pred HhcCCe-EEEEEHHHHHHHHHhhcCcEEEEEeCCc-eEEEEEECCEEee
Confidence 346776 7899999999887754 67889999876 5566778998764
No 61
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=40.43 E-value=28 Score=31.14 Aligned_cols=55 Identities=18% Similarity=0.139 Sum_probs=35.5
Q ss_pred eEEecCCCCCCC-hHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 298 IVLSGGSTMYPG-LPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 298 Ivl~GG~s~i~G-~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
|||.||.+..+. +.++|.+.+++.+.. +.. ...+++..+.-...+.-.||+.++-
T Consensus 243 IvlgG~v~~~~~~~~~~l~~~l~~~~~~------~~~--~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 243 VILGGGVMDMPAFPRETLVAMTQKYLRR------PLP--HQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp EEEECTTTTSTTCCHHHHHHHHHHTSCT------TTT--TTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred EEEeCchhccchhHHHHHHHHHHHHhhc------ccc--cCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 888888887655 567888888766321 111 1234555554456788899998875
No 62
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=39.47 E-value=65 Score=30.64 Aligned_cols=22 Identities=18% Similarity=-0.011 Sum_probs=18.6
Q ss_pred ceEEEEEcCCCceEEEEeeCCe
Q 016461 149 LTGLVIDSGDGVTHVVPVVDGY 170 (389)
Q Consensus 149 ~tglVVDiG~~~t~v~pv~dG~ 170 (389)
.+..|+|+|+++|.++-..+..
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~ 211 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSP 211 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSC
T ss_pred CceEEEEcCCCceEEEeccCCc
Confidence 4679999999999999876654
No 63
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=36.39 E-value=20 Score=33.22 Aligned_cols=24 Identities=17% Similarity=0.249 Sum_probs=19.5
Q ss_pred eEEEEEcCCCceEEEEeeCCeeccc
Q 016461 150 TGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 150 tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
+.+++.+|.+. .+..|.||.++..
T Consensus 177 ~~v~~~lGtGi-G~g~i~~G~~~~G 200 (381)
T 1saz_A 177 NLVVAHMGGGI-SIAAHRKGRVIDV 200 (381)
T ss_dssp EEEEEEESSSE-EEEEEETTEEEEE
T ss_pred CEEEEEeCCCc-EEEEEECCEEEEe
Confidence 89999999865 6777889988763
No 64
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=35.85 E-value=21 Score=34.72 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=20.4
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCC
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGENF 25 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~~ 25 (389)
||.+-.+.||+||.++|+++...+.
T Consensus 23 MM~~~~lgIDiGtts~k~~l~d~~G 47 (520)
T 4e1j_A 23 MMGGYILAIDQGTTSTRAIVFDGNQ 47 (520)
T ss_dssp CCSCEEEEEEECSSEEEEEEECTTS
T ss_pred HhhCeEEEEEeCCcceEEEEECCCC
Confidence 6655678999999999999886554
No 65
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=32.71 E-value=13 Score=34.42 Aligned_cols=23 Identities=22% Similarity=0.473 Sum_probs=20.3
Q ss_pred cCeEEecCCCCCCChHHHHHHHH
Q 016461 296 QHIVLSGGSTMYPGLPSRLEKEI 318 (389)
Q Consensus 296 ~nIvl~GG~s~i~G~~~rl~~el 318 (389)
+.|++|||++.-|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 46999999999999999988776
No 66
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=31.86 E-value=22 Score=32.78 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=37.1
Q ss_pred hHHHHHHHHHhCChhHHHHhhcCeEEecCCCCC-CChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeee
Q 016461 275 MADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMY-PGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYL 353 (389)
Q Consensus 275 l~~~i~~~i~~~~~d~r~~l~~nIvl~GG~s~i-~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~ 353 (389)
|...+...+..++++ .|+|.||.+.. +-|.+++++.+... .+.. ..+.+..+.....+...
T Consensus 302 La~~i~~l~~~ldP~-------~IvlgG~~~~~~~~l~~~l~~~l~~~--------~~~~---~~~~i~~s~~~~~a~~~ 363 (380)
T 2hoe_A 302 FSIGLLNLIHLFGIS-------KIVIGGFFKELGENFLKKIKIEVETH--------LLYK---HSVDMSFSKVQEPVIAF 363 (380)
T ss_dssp HHHHHHHHHHHHCCC-------EEEEEEGGGGGHHHHHHHHHHHHHHH--------CSSS---CCCEEEECCCCSCHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEcCchhhhhHHHHHHHHHHHHHh--------cCCC---CCcEEEEcCCCCcHHHH
Confidence 445555544444543 38888887653 44555666555544 2211 12344433333456778
Q ss_pred hHHHHhc
Q 016461 354 GGAVLAG 360 (389)
Q Consensus 354 Gasi~a~ 360 (389)
||+.++-
T Consensus 364 GAa~l~~ 370 (380)
T 2hoe_A 364 GAAVHAL 370 (380)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988764
No 67
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=31.19 E-value=3e+02 Score=24.99 Aligned_cols=123 Identities=17% Similarity=0.107 Sum_probs=0.0
Q ss_pred eEEEeCCCceEEEeecCCCCCccccccceEecCcchhhhhhhccCCceEeccccccccCccee-eccccCCcccChhhHH
Q 016461 6 VVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDV-SYPVNNGIVQNWEDMG 84 (389)
Q Consensus 6 ~iiiD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~-~~p~~~g~i~d~~~~e 84 (389)
.+.||+|.+++++++.. ..-... .. +.|.... +.+.+.
T Consensus 11 ~lgiDIGgt~i~~~l~d-~G~il~-------------------------------------~~~~~~~~~~---~~~~~l 49 (366)
T 3mcp_A 11 VMTLDAGGTNFVFSAIQ-GGKEIA-------------------------------------DPVVLPACAD---CLDKCL 49 (366)
T ss_dssp EEEEECSSSEEEEEEEE-TTEECS-------------------------------------CCEEEECCTT---CHHHHH
T ss_pred EEEEEECcceEEEEEEE-CCEEEE-------------------------------------EEEEEECCCC---CHHHHH
Q ss_pred HHHHH---HhhhcCCCCCCCCeEEEecC-------------CCCCHHH-HHHHHHHhhhhcCCCeeeeehhhHHHHhh--
Q 016461 85 QVWDH---AFFSELKIDPPECKILLTDP-------------PLNPAKN-REKMVETMFEKYNFAGVFIQIQAVLTLYA-- 145 (389)
Q Consensus 85 ~~l~~---~~~~~l~~~~~~~~vll~~~-------------~~~~~~~-r~~l~~~lfe~~~~~~v~~~~~~~~a~~~-- 145 (389)
+.+.. .+.+.+. ..-..+-+..| +..+.-. --.+.+.+=+.+++| |++.+++-+++++
T Consensus 50 ~~i~~~~~~i~~~~~--~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~P-V~veNDanaaAlgE~ 126 (366)
T 3mcp_A 50 GNLVEGFKAIQAGLP--EAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIP-VFINNDGSLFAYGEA 126 (366)
T ss_dssp HHHHHHHHHHHTTCS--SCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSC-EEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh--cCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCC-EEEechhhHHHHHHH
Q ss_pred ------------------cCCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 146 ------------------QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 146 ------------------~g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
.+..+.++|-+| ...-..-|.||.+..
T Consensus 127 ~~G~~p~~~~~l~~~g~~~~~~~~v~l~lG-tGIG~givi~G~l~~ 171 (366)
T 3mcp_A 127 LTGVLPEINRRLREAGSTKRYKNLLGVTLG-TGFGAGVVIDGELLR 171 (366)
T ss_dssp HTSHHHHHHHHHHHTTCCCCCCEEEEEEES-SSEEEEEEETTEECC
T ss_pred HhCCCcccccccccccccCCCCcEEEEEEC-CcceEEEEECCEEec
No 68
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=25.92 E-value=41 Score=33.46 Aligned_cols=43 Identities=12% Similarity=0.160 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCeEEEecCCCCCHHHHHHHHHHhhhhcC
Q 016461 81 EDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYN 129 (389)
Q Consensus 81 ~~~e~~l~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~ 129 (389)
+.++.|=+|+| ..+++||||+.....+.++.+++++++-|.||
T Consensus 236 ~v~~~I~~~AF------~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~g 278 (624)
T 1djx_A 236 DVLRAIRDYAF------KASPYPVILSLENHCSLEQQRVMARHLRAILG 278 (624)
T ss_dssp HHHHHHHHHTT------TSCSSCEEEEEEEECCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHhcc------cCCCCCEEEEecccCCHHHHHHHHHHHHHHHh
Confidence 44666666666 56889999999999999999999999977776
No 69
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=25.80 E-value=19 Score=33.29 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=20.1
Q ss_pred cCeEEecCCCCCCChHHHHHHHH
Q 016461 296 QHIVLSGGSTMYPGLPSRLEKEI 318 (389)
Q Consensus 296 ~nIvl~GG~s~i~G~~~rl~~el 318 (389)
..|++|||++.-|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 35999999999999999998775
No 70
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=24.85 E-value=53 Score=29.51 Aligned_cols=24 Identities=8% Similarity=-0.039 Sum_probs=19.0
Q ss_pred CCCCCeEEEeCCCceEEEeecCCC
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGEN 24 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~ 24 (389)
||..-.+.||+|.+++|+++...+
T Consensus 3 ~M~~~~lgiDiGgt~~~~~l~d~~ 26 (347)
T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSED 26 (347)
T ss_dssp SSSCEEEEEEECTTCEEEEEEETT
T ss_pred ccceEEEEEEcCccceEEEEEeCC
Confidence 444457999999999999987544
No 71
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=24.40 E-value=20 Score=19.14 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=11.0
Q ss_pred ccccHHHHhhcCc
Q 016461 368 FWISRDDYLEEGI 380 (389)
Q Consensus 368 ~~itr~ey~e~G~ 380 (389)
.-+|-++|+++|.
T Consensus 9 i~ls~~~y~~yG~ 21 (26)
T 2jsh_A 9 IKLSGAQYQQHGR 21 (26)
T ss_dssp GGGHHHHCSCSSS
T ss_pred eEecHHHHHHHhH
Confidence 5678899999996
No 72
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=23.84 E-value=36 Score=30.84 Aligned_cols=27 Identities=15% Similarity=0.282 Sum_probs=22.5
Q ss_pred hcCeEEecCCCCCCChHHHHHHHHHHh
Q 016461 295 YQHIVLSGGSTMYPGLPSRLEKEILDR 321 (389)
Q Consensus 295 ~~nIvl~GG~s~i~G~~~rl~~el~~~ 321 (389)
.++|+|+||.+.-..+.++|.+.+...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999888888888887643
No 73
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=23.79 E-value=37 Score=27.06 Aligned_cols=71 Identities=17% Similarity=0.177 Sum_probs=50.2
Q ss_pred hhhhcCCCeeeeehhhHHHHhhcCCceEEEEEcCCCceEEEEeeCCe-ecccceeeecccHhHHHHHHHHHHHhcC
Q 016461 124 MFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY-SFPHLTKRMNVAGRHITSYLVDLLSRRG 198 (389)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVDiG~~~t~v~pv~dG~-~~~~~~~~~~~GG~~l~~~l~~~l~~~~ 198 (389)
+|| +.+..+.+-++++.++--....+=|.+|+---.|+.+||..|. +..+....-.+ .++..|.+.|+..+
T Consensus 19 lfE-ihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V---~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 19 LFE-IHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLV---HVNDLFLQYIQKNT 90 (156)
T ss_dssp EEE-EEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEE---CCSHHHHHHHHHCC
T ss_pred EEE-EEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEE---EeCHHHHHHHhcCC
Confidence 344 5566777777777766555678889999999999999999984 44433334444 56667788887765
No 74
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=23.60 E-value=21 Score=31.55 Aligned_cols=23 Identities=22% Similarity=-0.039 Sum_probs=19.2
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCC
Q 016461 1 MDNRNVVVCDNGTGYVKCGFAGENF 25 (389)
Q Consensus 1 m~~~~~iiiD~Gs~~ik~G~ag~~~ 25 (389)
|| -.+.||+|.+++|+++...+.
T Consensus 1 mM--~~lgiDiGgt~~~~~l~d~~g 23 (299)
T 2e2o_A 1 MM--IIVGVDAGGTKTKAVAYDCEG 23 (299)
T ss_dssp CC--CEEEEEECSSCEEEEEECTTS
T ss_pred Ce--EEEEEEeCCCcEEEEEEcCCC
Confidence 66 579999999999999986543
No 75
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=23.38 E-value=1.4e+02 Score=25.95 Aligned_cols=49 Identities=12% Similarity=0.028 Sum_probs=33.2
Q ss_pred EEEEEcCCCceEEEEeeCCeecccceeee-cccHhHHHHHHHHHHHhcCC
Q 016461 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRM-NVAGRHITSYLVDLLSRRGY 199 (389)
Q Consensus 151 glVVDiG~~~t~v~pv~dG~~~~~~~~~~-~~GG~~l~~~l~~~l~~~~~ 199 (389)
-++||||.+.+....+.++..+....... ....+.+...+..++...+.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 37999999999888888876665322222 24456666677777776653
No 76
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=22.82 E-value=79 Score=29.99 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=49.0
Q ss_pred hhHHHHHHHHhhhcCCCC-CCCCeEEEecCCCC---C---HHHHHHHHHHhhhhc---CC--Ceeeeeh---hhH----H
Q 016461 81 EDMGQVWDHAFFSELKID-PPECKILLTDPPLN---P---AKNREKMVETMFEKY---NF--AGVFIQI---QAV----L 141 (389)
Q Consensus 81 ~~~e~~l~~~~~~~l~~~-~~~~~vll~~~~~~---~---~~~r~~l~~~lfe~~---~~--~~v~~~~---~~~----~ 141 (389)
+.++.+++++. +....+ ....||.+.-..-. + ...++.+++.+-+.+ ++ ..+.++. +++ +
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 34666776665 332221 24567777655322 1 123455555554443 22 3555554 333 3
Q ss_pred HHhhcCC------ceEEEEEcCCCceEEEEeeCCe
Q 016461 142 TLYAQGL------LTGLVIDSGDGVTHVVPVVDGY 170 (389)
Q Consensus 142 a~~~~g~------~tglVVDiG~~~t~v~pv~dG~ 170 (389)
+.|..|. .+..+||+|++.|+|+=..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3344453 5677899999999998766553
No 77
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=22.41 E-value=87 Score=29.75 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=38.9
Q ss_pred CeEEecCCCCCCChHHHHHHHHHHhhhhhhhcCCCCCCcceeEEEeCCCCCcceeeehHHHHhc
Q 016461 297 HIVLSGGSTMYPGLPSRLEKEILDRYLEVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAG 360 (389)
Q Consensus 297 nIvl~GG~s~i~G~~~rl~~el~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 360 (389)
.|.+-||....|+|.+++++.+.+++... .+. -...+|.+.... ..+=+||+++|.
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~----~~~-~~~~~v~~~~~~---dgsg~GAAl~aa 441 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWP----QSA-XXSKPIXITPAI---DGXGAASXVIXS 441 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCC----CSS-GGGSSEEEEECC---CTTTHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcc----ccc-ccCcceEEEECC---CchhhhHHHHHH
Confidence 47777888778999999999999885321 000 001356666664 458899999987
No 78
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=22.06 E-value=63 Score=33.22 Aligned_cols=43 Identities=19% Similarity=0.250 Sum_probs=34.8
Q ss_pred hhHHHHHHHHhhhcCCCCCCCCeEEEecCCCC-CHHHHHHHHHHhhhhcC
Q 016461 81 EDMGQVWDHAFFSELKIDPPECKILLTDPPLN-PAKNREKMVETMFEKYN 129 (389)
Q Consensus 81 ~~~e~~l~~~~~~~l~~~~~~~~vll~~~~~~-~~~~r~~l~~~lfe~~~ 129 (389)
+.++.|=+|+| ..+++||||+..... +.++.+++++++-|.||
T Consensus 386 ~v~~~I~~~AF------~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~G 429 (799)
T 2zkm_X 386 EAIEAIAESAF------KTSPYPIILSFENHVDSPRQQAKMAEYCRTIFG 429 (799)
T ss_dssp HHHHHHHHHTT------SSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHhcc------cCCCCCEEEEccccCCCHHHHHHHHHHHHHHhh
Confidence 45666666666 568899999999888 89999999999877776
No 79
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=21.79 E-value=2e+02 Score=24.55 Aligned_cols=52 Identities=25% Similarity=0.223 Sum_probs=37.5
Q ss_pred HHHhhhhcCCCeeeeehhhHHHHhhc-----C--Cc-eEEEEEcCCCceEEEEeeCCeeccc
Q 016461 121 VETMFEKYNFAGVFIQIQAVLTLYAQ-----G--LL-TGLVIDSGDGVTHVVPVVDGYSFPH 174 (389)
Q Consensus 121 ~~~lfe~~~~~~v~~~~~~~~a~~~~-----g--~~-tglVVDiG~~~t~v~pv~dG~~~~~ 174 (389)
.+.+=+.+++| |++.+++-+++++- + .. +.++|-+|.+ .-..-|.||.+...
T Consensus 107 ~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 107 DALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp HHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred HHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 34444557888 88999999988762 2 23 5678999986 67777899987763
No 80
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.87 E-value=1.6e+02 Score=27.27 Aligned_cols=48 Identities=17% Similarity=0.245 Sum_probs=36.7
Q ss_pred hhhhcCCCeeeeehhhHHHHhhc-------CCceEEEEEcCCCceEEEEeeCCeecc
Q 016461 124 MFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (389)
Q Consensus 124 lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVDiG~~~t~v~pv~dG~~~~ 173 (389)
+=+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.||.+..
T Consensus 204 L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~ 258 (429)
T 1z05_A 204 IYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQ 258 (429)
T ss_dssp HHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEee
Confidence 33456787 78999999988753 4578999999987 5677788988765
No 81
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=20.05 E-value=51 Score=31.59 Aligned_cols=21 Identities=19% Similarity=0.124 Sum_probs=17.3
Q ss_pred CeEEEeCCCceEEEeecCCCC
Q 016461 5 NVVVCDNGTGYVKCGFAGENF 25 (389)
Q Consensus 5 ~~iiiD~Gs~~ik~G~ag~~~ 25 (389)
-.+.||+||.++|+++..++.
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~G 27 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLDG 27 (482)
T ss_dssp -CEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEcCCCCeEEEEEECCC
Confidence 478999999999999887553
Done!