BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016469
(389 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
Length = 389
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 381/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGR+KA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRMKA 389
>gi|225460636|ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
Length = 397
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 381/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 9 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 68
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 69 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 128
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 129 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 188
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 189 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 248
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK QESH+A+T
Sbjct: 249 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 308
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 309 EFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 368
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGR+KA
Sbjct: 369 KFIDTSSKFGHGRFQTTQEKQKFYGRMKA 397
>gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 381/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 61 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVREV 120
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVV YVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 121 EKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 180
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK IQAQLEKMKKY +VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 181 NWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAH 240
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVD+AYGFFEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 241 LMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 300
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK QESH+A+T
Sbjct: 301 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKIEQESHTALT 360
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY++IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 361 EFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 420
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGR+KA
Sbjct: 421 KFIDTSSKFGHGRFQTTQEKQKFYGRMKA 449
>gi|313586459|gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]
Length = 389
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/389 (91%), Positives = 381/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YETDDGKK IQAQLEK+KKY V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
++DRTEKDITPMGGFPHYGVV +DY++IKGCCVGPKKRVVTLR+SLL QTSR+ALEEIKL
Sbjct: 301 DYDRTEKDITPMGGFPHYGVVKDDYIMIKGCCVGPKKRVVTLRRSLLTQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|350539715|ref|NP_001233997.1| ribosomal protein L3 [Solanum lycopersicum]
gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum]
Length = 389
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/389 (91%), Positives = 378/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR L TVWAQHL+E+++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+KKYETD+GKKDIQAQLEK+KKY VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTALT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITP+GGFPHYGVV EDYLLIKGCCVG KKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKRVVTLRQSLLNQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/389 (91%), Positives = 380/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFPKDDP+KPC+LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIMREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+V+VGVVGYVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+++ ET++GKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGGQESHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYGVV +DYL+IKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|313586457|gb|ADR71239.1| 60S ribosomal protein L3A [Hevea brasiliensis]
Length = 389
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 379/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YETDDGKK IQAQLEK+KKY V+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETDDGKKSIQAQLEKIKKYAHVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGQESHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
++DRTEKDITPMGGFPHYGVV +DY++IKGCCVGPKKRVVTLR LL QTSR+ALEEIKL
Sbjct: 301 DYDRTEKDITPMGGFPHYGVVKDDYIMIKGCCVGPKKRVVTLRLFLLTQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
Length = 389
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 378/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPC+LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPNKPCKLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+V+VGVVGYVKTPRGLR L TVWAQHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+KKYE+D+GKKDIQ QLEK+KKY VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YKLGKA QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAGQESHAAVT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FDRTEKDITPMGGFPHYGVV +DYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301 DFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLK
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKG 389
>gi|359486157|ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/389 (93%), Positives = 382/389 (98%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+ PCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTNPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGY+KTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYE++DGKKDIQAQLEKMKKYC VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG VA+KVD+AYGFFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK QESHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DYLLIKGCCVGPKKRVVTLRQSLLKQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEKAK++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389
>gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
Length = 389
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 378/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGYVKTPRGLR L TVWAQHL+E+++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEDIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+KKYETD+GKKDIQAQLEK+KKY VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+AQKVDFAYGFFEKQ+P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YKLGK QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKLGKVGQESHTAVT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEK+ITP+GGF HYGVV +DYLLIKGCCVGPKKRVVTLRQSLL QTSR+ALEEIKL
Sbjct: 301 EFDRTEKEITPIGGFAHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
Length = 389
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/389 (93%), Positives = 382/389 (98%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFL RKRA+RHRGKVKAFPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLXRKRAARHRGKVKAFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGY+KTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYLKTPRGLRSLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYE++DGKKDIQAQLEKMKKYC VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG VA+KVD+AYGFFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK QESHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DYLLIKGCCVGPKKRVVTLRQSLLKQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEKAK++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKFFGRLKA 389
>gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa]
gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa]
gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/389 (89%), Positives = 380/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+KPC+LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPTKPCKLTSFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VGVVGY+KTP GLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+K+YETD+GKK IQ+QLEK+KKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+GK QE+H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVGKVGQETHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYGVV +DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa]
gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa]
gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/389 (89%), Positives = 378/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDP+KPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPNKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+V+VGVVGY+KTP GLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVIVGVVGYLKTPSGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKK+AF KY+K+YETD+GKK IQ+QLEK+KKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKRAFNKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK QE H+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKTGQECHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYGVV +DYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA EEIKL
Sbjct: 301 EYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAHEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFVDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|356535772|ref|XP_003536417.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/389 (89%), Positives = 379/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGS+AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGSIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +D++++KGCCVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDFIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum]
Length = 409
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/409 (86%), Positives = 376/409 (91%), Gaps = 20/409 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDTTKPCRLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP++VVGVVGYVKTPRGLR L TVWAQHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCELVTIIETPPMIVVGVVGYVKTPRGLRCLSTVWAQHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETD--------------------DGKKDIQAQLEKMKKYCTVI 160
NWC SKKKAF KY+KKYETD DGKKDI AQLEKMKKYC VI
Sbjct: 121 NWCMSKKKAFAKYSKKYETDNWCMSKKKAFAKYSKKYETDDGKKDINAQLEKMKKYCCVI 180
Query: 161 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDI 220
RVLAHTQIRKMKGLKQKKAHLMEIQVNGG V+QKVD+AYGFFEKQIP+DA+FQKDEMIDI
Sbjct: 181 RVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQKVDYAYGFFEKQIPVDAIFQKDEMIDI 240
Query: 221 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 280
IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE
Sbjct: 241 IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTE 300
Query: 281 MNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVV 340
+NKK+Y+LGKA QESHSA+TEFDRTEKDITPMGGFPHYG+V ED+LLIKGCCVGPKKRVV
Sbjct: 301 LNKKVYRLGKAGQESHSAITEFDRTEKDITPMGGFPHYGIVKEDFLLIKGCCVGPKKRVV 360
Query: 341 TLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
TLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 TLRQSLLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKDKFYGRLKA 409
>gi|356576067|ref|XP_003556156.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/389 (88%), Positives = 379/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITP+GGFPHYGVV +DY+++KGCCVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|449441226|ref|XP_004138383.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
gi|449499176|ref|XP_004160742.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
Length = 389
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/389 (88%), Positives = 375/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDATKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+K+YETD+GKK IQ +LEK+KKY +VIRVLAHTQI KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFAKYSKQYETDEGKKTIQEKLEKLKKYASVIRVLAHTQITKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+AQKVD+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGSIAQKVDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK QESH+A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|255642195|gb|ACU21362.1| unknown [Glycine max]
Length = 389
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/389 (88%), Positives = 377/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKAPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRGLR+L TVWAQHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+K+YET++GKK+I+AQLEK+KKY TV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++AQKVDFAY F EKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYSFLEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKK+YKLGKA ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHSALT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITP+GGFPHYGVV +DY+++KGCCVG KKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGLKKRVITLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFFGRLKA 389
>gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/389 (91%), Positives = 377/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASR RGKVKAFPKDDP KPCRLTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRQRGKVKAFPKDDPKKPCRLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSL TVWAQHL+E+V+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEDVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KK+E+++GKKD Q QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG VAQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHESHSAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYG+V ED+L+IKGCCVGPKKRVVTLRQSLL QTSR+A+EEIK+
Sbjct: 301 EYDRTEKDITPIGGFPHYGIVKEDFLMIKGCCVGPKKRVVTLRQSLLNQTSRVAMEEIKI 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQT QEKAK+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTAQEKAKFYGRLKA 389
>gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa]
gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/389 (91%), Positives = 376/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYV TP GLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KKYE++DGKKDIQAQLEK+KKYCTVIRVL HTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG VA+KVDFAY FFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK QESH A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYGVV EDYL+IKGCCVGPKKRVVTLRQSLLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT+EKAK+YGRLK
Sbjct: 361 KFIDTSSKFGHGRFQTTEEKAKFYGRLKT 389
>gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa]
Length = 389
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/389 (91%), Positives = 377/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGK K+FPKDDP+KPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKAKSFPKDDPTKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYV TP GLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVNTPGGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KKYE++DGKKDIQAQLEK+KKYCTVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYCKKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG VA+KVDFAY FFEKQIPIDA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVAKKVDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE++KKIYKLGK QESH A+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQESHCAVT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITP+GGFPHYGVV EDYL+IKGCCVGPKKRVVTLRQSLLKQTSR+A+EEIKL
Sbjct: 301 EYDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT+EKAK+YGRLK
Sbjct: 361 KFIDTSSKFGHGRFQTTEEKAKFYGRLKT 389
>gi|356544202|ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 381/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTAFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L T+WAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIRVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V QKVD+AY FFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+ KA QESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADQESHSAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY+++KGCCVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRQSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKHKFYGRLKA 389
>gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis]
Length = 389
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/389 (87%), Positives = 372/389 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNAVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW ++KKKAFTKY KKY++++GKK+IQ +LEKMKKY TVIRVLAHTQI+KMKGLKQ KAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVLAHTQIKKMKGLKQNKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V QKVD+AY FFEKQ+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVPQKVDYAYNFFEKQVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK QESH+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKKDQESHNAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY++I+GCC+G KKRVVTLRQSLLKQTSR ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYIMIRGCCMGTKKRVVTLRQSLLKQTSRTALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQT QEKAK YG+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTIQEKAKIYGKLKA 389
>gi|194693910|gb|ACF81039.1| unknown [Zea mays]
gi|194702010|gb|ACF85089.1| unknown [Zea mays]
gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays]
gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays]
gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays]
gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays]
gi|414587226|tpg|DAA37797.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414587227|tpg|DAA37798.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414587235|tpg|DAA37806.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414587236|tpg|DAA37807.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414588487|tpg|DAA39058.1| TPA: 60S ribosomal protein L3 isoform 1 [Zea mays]
gi|414588488|tpg|DAA39059.1| TPA: 60S ribosomal protein L3 isoform 2 [Zea mays]
gi|414588489|tpg|DAA39060.1| TPA: 60S ribosomal protein L3 isoform 3 [Zea mays]
gi|414588495|tpg|DAA39066.1| TPA: 60S ribosomal protein L3 [Zea mays]
Length = 389
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/389 (87%), Positives = 369/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
>gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group]
Length = 733
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/389 (87%), Positives = 371/389 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+V
Sbjct: 345 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 404
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 405 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 464
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY +++RV+AHTQIRKMKGLKQKKAH
Sbjct: 465 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 524
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 525 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 584
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 585 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 644
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 645 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 704
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 705 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 733
>gi|212721340|ref|NP_001131208.1| uncharacterized protein LOC100192516 [Zea mays]
gi|194690876|gb|ACF79522.1| unknown [Zea mays]
gi|414866108|tpg|DAA44665.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
gi|414866109|tpg|DAA44666.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 389
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/389 (87%), Positives = 368/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDAKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
>gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|548770|sp|P35684.2|RL3_ORYSJ RecName: Full=60S ribosomal protein L3
gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group]
gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group]
gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group]
gi|403081497|gb|AFR23065.1| hypothetical protein [Oryza sativa]
Length = 389
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/389 (87%), Positives = 371/389 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD SKPC LT+F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVSKPCHLTSFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY +++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
>gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum]
gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum]
gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum]
gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum]
gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum]
Length = 389
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/389 (87%), Positives = 368/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY T++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQKFYGRLKA 389
>gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum]
gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum]
gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum]
gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum]
gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum]
gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum]
Length = 389
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/389 (87%), Positives = 368/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY T++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK K+YG+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQKFYGKLKA 389
>gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group]
gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group]
gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica
cultivar-group)]
gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa]
gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/389 (86%), Positives = 370/389 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY +V+RV+ HTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 389
>gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/389 (86%), Positives = 369/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY T++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHEACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT+EK ++YG+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTEEKQRFYGKLKA 389
>gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum]
gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum]
gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum]
gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum]
gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum]
gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum]
gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum]
Length = 389
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/389 (86%), Positives = 367/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY TV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQTT EK ++YG+LKA
Sbjct: 361 KFVDTSSKFGHGRFQTTDEKQRFYGKLKA 389
>gi|356531559|ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/389 (89%), Positives = 378/389 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIRVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V QKVD+AY FFEKQIP+DAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYK+ KA ESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKVAKADHESHSAIT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV +DY+++KGCCVGPKKRV+TLR+SLLKQTSR+ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKDDYIMVKGCCVGPKKRVITLRRSLLKQTSRVALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKQKFYGRLKA 389
>gi|357157422|ref|XP_003577793.1| PREDICTED: 60S ribosomal protein L3-like [Brachypodium distachyon]
Length = 389
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/389 (86%), Positives = 368/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DDP K C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDPQKKCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY +V+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT+EK ++Y +LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTEEKQRFYNKLKA 389
>gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
Length = 389
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/389 (87%), Positives = 366/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTP GLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPCGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY+ D GKK+IQ QLEKMKKY T++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDCDAGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK K+YGRLKA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQKFYGRLKA 389
>gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum]
Length = 389
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/389 (86%), Positives = 366/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYK+GMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKSGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+I QLEKMKKY TV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIHMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQTT EK ++YG+LKA
Sbjct: 361 KFVDTSSKFGHGRFQTTDEKQRFYGKLKA 389
>gi|15220533|ref|NP_176352.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
gi|21542436|sp|P22738.4|RL32_ARATH RecName: Full=60S ribosomal protein L3-2
gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana]
gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana]
gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana]
gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
Length = 390
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/386 (88%), Positives = 374/386 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSLCTVWAQHL+EE+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y+KK+ET++GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGG +A+KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITPMGGFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KFID +S GHGRFQT+QEKAK+YGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386
>gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana]
Length = 390
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/386 (88%), Positives = 374/386 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSLCTVWAQHL+EE+RRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y+KK+ET++GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKG+KQKKAH
Sbjct: 121 NWAKSKKKAFTRYSKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGVKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGG +A+KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITPMGGFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRLA+EEIKL
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KFID +S GHGRFQT+QEKAK+YGR
Sbjct: 361 KFIDAASNGGHGRFQTSQEKAKFYGR 386
>gi|357443613|ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
gi|355481132|gb|AES62335.1| L3 Ribosomal protein [Medicago truncatula]
Length = 455
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/389 (88%), Positives = 374/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 67 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 126
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 127 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 186
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 187 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 246
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 247 IMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 306
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK +E+H A T
Sbjct: 307 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 366
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V ED+L+IKG CVGPKKRV+TLRQSLLKQTSRLALE+IKL
Sbjct: 367 EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 426
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK K+YGRLKA
Sbjct: 427 KFIDTSSKFGHGRFQTTSEKQKFYGRLKA 455
>gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis]
gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis]
Length = 389
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/389 (88%), Positives = 374/389 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DD SKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDQSKPCKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVT+IETPP+V+VGVV Y+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW ++KKKAFTKY KKY++++GKKDIQ +LEKMKKY TVIRVLAHTQI+KMKGLKQKKAH
Sbjct: 121 NWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VAQKVD+AY FFEKQ+PIDA+FQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVAQKVDYAYNFFEKQVPIDALFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GKA QESH AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKADQESHKAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGV+ +DY++I+GCCVG KKRVVTLRQSLLKQTSR ALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGVLKDDYIMIRGCCVGTKKRVVTLRQSLLKQTSRTALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTTQEKAK +G+LKA
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKAKIFGKLKA 389
>gi|449435140|ref|XP_004135353.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
gi|449503293|ref|XP_004161930.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
Length = 388
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/388 (87%), Positives = 372/388 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP+DD SKPCRLTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPRDDSSKPCRLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIE PP+VVVGVVGY++TPRGLRS TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYIRTPRGLRSFKTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWC SKKKAFTKY+KKYET+DGKKDIQ+QL+ ++K+ TVIRVLAH+QIRKM+GLKQKKAH
Sbjct: 121 NWCMSKKKAFTKYSKKYETEDGKKDIQSQLDSLRKHSTVIRVLAHSQIRKMQGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG V +KVD+AY FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGDVPKKVDYAYSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK Q+SHSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQDSHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITP+GGFPHYG+V EDYL+IKG C GPKKRVVTLRQSL+KQTSR+A+EEIKL
Sbjct: 301 EFDRTEKDITPIGGFPHYGIVKEDYLMIKGGCAGPKKRVVTLRQSLIKQTSRVAMEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQTTQEKA++YGR+K
Sbjct: 361 KFIDTSSKFGHGRFQTTQEKARFYGRVK 388
>gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
Length = 390
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/386 (88%), Positives = 371/386 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KPCRLT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDPTKPCRLTSFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPP+VVVGVVGYVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPMVVVGVVGYVKTPRGLRSLSTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK+ETD+GKKDIQ+QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTKYSKKHETDEGKKDIQSQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGG +A+KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LNEIQINGGDIAKKVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKDITPMGGFPHYG+V EDYL+IKG CVGPKKRVVTLRQ+LLKQTSR+A EEI +
Sbjct: 301 EYDRTEKDITPMGGFPHYGIVKEDYLMIKGGCVGPKKRVVTLRQTLLKQTSRVATEEINI 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KFID SSKFGHGRFQT+QEKAK+Y +
Sbjct: 361 KFIDMSSKFGHGRFQTSQEKAKFYNK 386
>gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum]
Length = 384
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/389 (85%), Positives = 362/389 (93%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVKAFP+DD SK C LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKAFPRDDQSKKCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E LHKKETCEAVTI+ETPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 E-----LHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 115
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY TV+RV+AHTQIRKMKGLKQKKAH
Sbjct: 116 NWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQIRKMKGLKQKKAH 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 176 LMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H A T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 296 EFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQTT EK ++YG+LKA
Sbjct: 356 KFVDTSSKFGHGRFQTTDEKQRFYGKLKA 384
>gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
Length = 389
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/389 (87%), Positives = 369/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY +VIRV+AHTQI+KMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYASVIRVIAHTQIKKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQESHDAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK K+YG+ KA
Sbjct: 361 KFIDTSSKFGHGRFQTTDEKQKFYGKQKA 389
>gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana]
Length = 555
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/387 (86%), Positives = 367/387 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 167 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 226
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 227 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 286
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 287 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 346
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 347 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 406
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMT
Sbjct: 407 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 466
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKL
Sbjct: 467 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 526
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDT+S FGHGRFQT+ EK ++Y R+
Sbjct: 527 KFIDTASIFGHGRFQTSLEKMRFYNRV 553
>gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/388 (87%), Positives = 367/388 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+YET++GKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYETEEGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+HSAMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHSAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGFPHYGVV +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDT+S GHGRFQTT EK ++YGR K
Sbjct: 361 KFIDTASNGGHGRFQTTLEKMRFYGRTK 388
>gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila]
Length = 389
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/389 (86%), Positives = 368/389 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+YE++DGKK I AQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESEDGKKSIHAQLEKMKKYGTVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPID+VFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIDSVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK QE+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGQETHTAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGF HYG+V +DYL+IKGC +GPKKRVVTLRQSLL QTSRLALEEI+L
Sbjct: 301 EYDRTEKDVTPMGGFAHYGIVKDDYLMIKGCRMGPKKRVVTLRQSLLTQTSRLALEEIRL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSK GHG+FQTTQEK K+Y R+KA
Sbjct: 361 KFIDTSSKMGHGKFQTTQEKNKFYNRVKA 389
>gi|15218306|ref|NP_175009.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|42571751|ref|NP_973966.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|79319275|ref|NP_001031146.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183068|ref|NP_001185148.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183070|ref|NP_001185149.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183072|ref|NP_001185150.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183074|ref|NP_001185151.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|334183076|ref|NP_001185152.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|27735225|sp|P17094.5|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein
EMBRYO DEFECTIVE 2207
gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana]
gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 389
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/387 (86%), Positives = 367/387 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDT+S FGHGRFQT+ EK ++Y R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387
>gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/387 (86%), Positives = 366/387 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQH +EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHFSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+Y+++DGKK IQAQLEKMKKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCVGPKKRVVTLRQSLL QTSRLALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCVGPKKRVVTLRQSLLTQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDT+S FGHGRFQT+ EK ++Y R+
Sbjct: 361 KFIDTASIFGHGRFQTSLEKMRFYNRV 387
>gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia]
Length = 388
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/384 (87%), Positives = 365/384 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 IMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK +E+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V ED+L+IKG CVGPKKRV+TLRQSLLKQTSRLALE+IKL
Sbjct: 301 EFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYY 384
KFIDTS KFGHGRFQTT E +
Sbjct: 361 KFIDTSFKFGHGRFQTTSENQSLW 384
>gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/387 (85%), Positives = 365/387 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKTPRGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+Y+++DGKK IQAQLEK+KKY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKVKKYATVIRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+H+AMT
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEKD+TPMGGFPHYG+V +DY +IKGCCVG KKRVVTLRQSLL QTSRLALEEIKL
Sbjct: 301 EYDRTEKDVTPMGGFPHYGIVKDDYFMIKGCCVGAKKRVVTLRQSLLTQTSRLALEEIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDT+S FGHG+FQT+ EK ++Y R+
Sbjct: 361 KFIDTASIFGHGQFQTSLEKMRFYNRV 387
>gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
Length = 389
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/389 (82%), Positives = 362/389 (93%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPL++VGVV Y+KTPRGLRSL TVWAQHL+++++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ KSKKKAFTKY KKY+TD+GKK I+ +LE+MKKY +VIRVLAHT++R +KG+KQKKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+ A+KVDFAY FFEK +PID+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQESHKAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+KDITPMGGF HYGVVNEDY++IKGCC+G +KRV+TLRQSL KQTSR ALE+IKL
Sbjct: 301 EFDTTDKDITPMGGFAHYGVVNEDYIMIKGCCMGVRKRVITLRQSLWKQTSRNALEDIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQT+ EKAK +G++KA
Sbjct: 361 KFVDTSSKFGHGRFQTSLEKAKVFGKVKA 389
>gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
Length = 389
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/389 (81%), Positives = 362/389 (93%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDP+K LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAQRHRGKVKSFPRDDPTKKPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPL++VGVV Y+KTPRGLRSL TVWAQHL+++++RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLIIVGVVAYIKTPRGLRSLNTVWAQHLSDDLKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ KSKKKAFTKY KKY+TD+GKK I+ +LE+MKKY +VIRVLAHT++R +KG+KQKKAH
Sbjct: 121 NFYKSKKKAFTKYAKKYDTDEGKKGIEHELERMKKYGSVIRVLAHTKVRNLKGIKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+ A+KVDFAY FFEK +PID+VF+KDEMID+IGVTKG GYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTTAEKVDFAYNFFEKAVPIDSVFRKDEMIDVIGVTKGHGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK+GK Q+SH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKIGKQGQDSHKAST 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+KDITPMGGF HYGVVNEDY++IKGCC+G +KRV+TLRQSL KQTSR ALE+IKL
Sbjct: 301 EFDTTDKDITPMGGFAHYGVVNEDYIMIKGCCMGVRKRVITLRQSLWKQTSRNALEDIKL 360
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSKFGHGRFQT+ EKAK +G++KA
Sbjct: 361 KFVDTSSKFGHGRFQTSLEKAKVFGKVKA 389
>gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/390 (81%), Positives = 359/390 (92%), Gaps = 1/390 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASR RGKVK FPKDDP K LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRSRGKVKTFPKDDPVKKPHLTSFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP++VVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAF+KY+K+YE+++GK+D+Q++LE+MKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGG++A+KVDF Y FEK +P+DAVF KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGTIAEKVDFGYNLFEKPVPVDAVFNKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-ASQESHSAM 299
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK A +ES SA
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKSADKESFSAS 300
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK+ITPMGGF HYG+V EDYL+IKG +GPKKRV+TLRQSL KQ SR ALE+IK
Sbjct: 301 TEFDVTEKEITPMGGFAHYGIVREDYLMIKGGVMGPKKRVITLRQSLYKQVSRSALEDIK 360
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LKFIDTSSKFGHGRFQT+ EKAK YG++KA
Sbjct: 361 LKFIDTSSKFGHGRFQTSLEKAKVYGKVKA 390
>gi|414587224|tpg|DAA37795.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 429
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/371 (85%), Positives = 345/371 (92%)
Query: 19 RKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 78
R +S RG ++FP+DDP KPC LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTI
Sbjct: 59 RTVSSSTRGTAQSFPRDDPKKPCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTI 118
Query: 79 IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
IETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWCKSKKKAFTKY KYE
Sbjct: 119 IETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYE 178
Query: 139 TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 198
D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAHLMEIQVNGG++A KVD+
Sbjct: 179 NDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYG 238
Query: 199 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 258
Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 239 YKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 298
Query: 259 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHY 318
HPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFDRTEKDITPMGGFPHY
Sbjct: 299 HPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFDRTEKDITPMGGFPHY 358
Query: 319 GVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQ 378
G+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT
Sbjct: 359 GIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTD 418
Query: 379 EKAKYYGRLKA 389
EK +++G+LKA
Sbjct: 419 EKQRFFGKLKA 429
>gi|357155087|ref|XP_003577004.1| PREDICTED: cytochrome P450 89A2-like [Brachypodium distachyon]
Length = 836
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/369 (84%), Positives = 343/369 (92%)
Query: 21 RASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIE 80
R SRHRGKVKAFP+DD K C LTAFLGYKAGMTHIVR+VEKPGSKLHKKETCEAVTIIE
Sbjct: 468 RCSRHRGKVKAFPRDDQQKSCHLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIE 527
Query: 81 TPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETD 140
TPP+V+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYKNWCKSKKKAFTKY KY+TD
Sbjct: 528 TPPIVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDTD 587
Query: 141 DGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYG 200
GKK+IQ QLEKMKKY +V+RV+AHTQIRKMKGLKQKKAHLMEIQ+NGG++A KVD+ Y
Sbjct: 588 AGKKEIQLQLEKMKKYASVVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYK 647
Query: 201 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 260
FFEK++P++AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 648 FFEKEVPVEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 707
Query: 261 ARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGV 320
ARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H A TEFDRTEKDITPMGGFPHYGV
Sbjct: 708 ARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGV 767
Query: 321 VNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEK 380
V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE I LKF+DTSSKFGHGRFQTT EK
Sbjct: 768 VKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALENITLKFVDTSSKFGHGRFQTTDEK 827
Query: 381 AKYYGRLKA 389
++YGR KA
Sbjct: 828 QRFYGRRKA 836
>gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/389 (80%), Positives = 358/389 (92%), Gaps = 1/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+R RGKVK FPKD SK LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDVASKEPHLTSFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP+VVVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAF+KY+K+YE+++GKKD++++LE+MKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KVDF Y FEK++P+D+VF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGSIAAKVDFGYKLFEKEVPVDSVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-ASQESHSAM 299
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK A ++S SA
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKVADKQSFSAS 300
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK+ITPMGGF HYG+V EDYL+IKG +GPKKRV+TLRQSL KQ SR ALE+IK
Sbjct: 301 TEFDVTEKEITPMGGFAHYGIVREDYLMIKGGVMGPKKRVITLRQSLYKQVSRSALEDIK 360
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT+ EKAK YG++K
Sbjct: 361 LKFIDTSSKFGHGRFQTSLEKAKVYGKVK 389
>gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/390 (79%), Positives = 357/390 (91%), Gaps = 1/390 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+R RGKVK FPKDD SK LT+FLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARSRGKVKTFPKDDASKAPHLTSFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTI+ETPP++VVG+V Y+KTPRGLRSL TVWAQHL++EV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAF+ Y+K+YE+++GKKD++++LE+MKKY +VIRVLAHTQ+RK+KG+KQKKAH
Sbjct: 121 NWSKSKKKAFSNYSKRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGG++A+KVDF + FEK + +DAVF+KDEMIDIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 LAEIQVNGGNIAEKVDFGFKLFEKWVSVDAVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAM 299
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GKA ++S A
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAEDKQSFGAS 300
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK+ITPMGGF HYG+V EDYL++KG +GPKKRV+TLRQSL KQ SR ALE+IK
Sbjct: 301 TEFDVTEKEITPMGGFAHYGIVREDYLMLKGGVMGPKKRVITLRQSLYKQVSRSALEDIK 360
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LKFIDTSSKFGHGRFQT+ EKAK YG++KA
Sbjct: 361 LKFIDTSSKFGHGRFQTSFEKAKVYGKVKA 390
>gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
Length = 375
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/386 (82%), Positives = 350/386 (90%), Gaps = 14/386 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDD +KPC+ TAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRANRHRGKVKAFPKDDQTKPCKFTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETP +VVVGVV YVKT RGLRSL TVWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPAMVVVGVVAYVKTLRGLRSLNTVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT Y K+YE+DDG+K IQAQLEKMKKY T+IRVLAHTQIRKMKGL QKKAH
Sbjct: 121 NWAKSKKKAFTGYAKQYESDDGRKGIQAQLEKMKKYGTIIRVLAHTQIRKMKGLTQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ IPIDAVFQKDEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 181 MMEIQINGGTI--------------IPIDAVFQKDEMIDVIGVTKGKGYEGVVTRWGVTR 226
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLR+VACIGAWHPARVS+TVARAGQNGYHHRTE+NKKIY+LGK E+HSAMT
Sbjct: 227 LPRKTHRGLREVACIGAWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTETHSAMT 286
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRTEK+ITPMGGF HYG+V +DYL+IKGCC+GPKKRVVTLRQSLL+QTSRLA+E I +
Sbjct: 287 EYDRTEKEITPMGGFAHYGIVKDDYLMIKGCCMGPKKRVVTLRQSLLRQTSRLAMEVINI 346
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KF+DTSSK GHG FQT++EKAK+ GR
Sbjct: 347 KFVDTSSKQGHGHFQTSEEKAKFLGR 372
>gi|358346097|ref|XP_003637108.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
gi|355503043|gb|AES84246.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
Length = 349
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/349 (90%), Positives = 339/349 (97%)
Query: 30 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
KAFPKDDP+KPCRLTAF+GYK+GMTHIVR+VEKPGSKLHKKETCEAVTIIETPP+VVVGV
Sbjct: 1 KAFPKDDPTKPCRLTAFVGYKSGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGV 60
Query: 90 VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
VGYVKTPRGLR+L TVWAQHL+E+V+RRFYKNW KSKKKAFTKYTKKYETD+GKKDIQ Q
Sbjct: 61 VGYVKTPRGLRTLNTVWAQHLSEDVKRRFYKNWAKSKKKAFTKYTKKYETDEGKKDIQTQ 120
Query: 150 LEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPID 209
LEK+KKY TVIRVLAHTQ+RK+KGLKQKKAHLMEIQVNGG+V QKVD+AY FFEKQIP+D
Sbjct: 121 LEKLKKYATVIRVLAHTQVRKLKGLKQKKAHLMEIQVNGGTVNQKVDYAYNFFEKQIPVD 180
Query: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 269
AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR
Sbjct: 181 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 240
Query: 270 AGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIK 329
AGQNGYHHRTE+NKKIYK+GK QESH+A+TEFDRTEKDITPMGGFPHYGVVN DYL+IK
Sbjct: 241 AGQNGYHHRTELNKKIYKVGKQDQESHTAITEFDRTEKDITPMGGFPHYGVVNHDYLMIK 300
Query: 330 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQ 378
G CVGPKKRVVTLRQSLLKQTSRLALE+IKLKFIDTSSKFGHGRFQTTQ
Sbjct: 301 GGCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTQ 349
>gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum]
Length = 401
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/349 (86%), Positives = 330/349 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR SRHRGKVK+FPKDD KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRCSRHRGKVKSFPKDDQQKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E+VRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KY++D GKK+IQ QLEKMKKY T++RV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++A KVD+ Y FFEK++P++AVFQKDEM+DIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GK+ QESH A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKMGKSGQESHEACT 300
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
EFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQ
Sbjct: 301 EFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQ 349
>gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group]
Length = 345
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/345 (86%), Positives = 328/345 (95%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSLGFLPRKR+SRHRGKVK+FPKDD +KPC LT+F+GYKAGMTHIVR+VEKPGSKLHKKE
Sbjct: 1 GSLGFLPRKRSSRHRGKVKSFPKDDVNKPCHLTSFVGYKAGMTHIVREVEKPGSKLHKKE 60
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
TCEAVTIIETPP+VVVG+V YVKTPRGLRSL +VWAQHL+EEVRRRFYKNWCKSKKKAFT
Sbjct: 61 TCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFT 120
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY KY++D GKK+IQ QLEKMKKY +V+RV+ HTQIRKMKGLKQKKAHLMEIQ+NGG++
Sbjct: 121 KYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVHTQIRKMKGLKQKKAHLMEIQINGGTI 180
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KVD+ Y FFEK+IP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK
Sbjct: 181 ADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 240
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK+ QESH+A TEFDRTEKDITP
Sbjct: 241 VACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITP 300
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
MGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE
Sbjct: 301 MGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 345
>gi|414587230|tpg|DAA37801.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
gi|414866107|tpg|DAA44664.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 352
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 308/389 (79%), Positives = 334/389 (85%), Gaps = 37/389 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGK
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGK-------------------------------- 28
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 29 -----ELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 83
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAH
Sbjct: 84 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 143
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 144 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 203
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 204 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 263
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL
Sbjct: 264 EFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 323
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 324 KFIDTSSKFGHGRFQTTDEKQRFFGKLKA 352
>gi|388502726|gb|AFK39429.1| unknown [Lotus japonicus]
Length = 350
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/389 (78%), Positives = 339/389 (87%), Gaps = 39/389 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVK+FPKDDPSK +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKSFPKDDPSKSPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+V+VGVVGYVKTPRG+R+L TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGMRTLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF+KY+K++E+++GKK++QAQLEK+KKY TV+RVLAHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFSKYSKQFESEEGKKNVQAQLEKIKKYATVVRVLAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
IIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 ---------------------------------------IIGVTKGKGYEGVVTRWGVTR 201
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIY+LG A ESHSA+T
Sbjct: 202 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYRLGMAGDESHSAIT 261
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRTEK+ITPMGGFPHYG+V +D+L+IKG CVGPKKRV+TLRQSLLKQTSR+ALEEIKL
Sbjct: 262 EFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKL 321
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQ+TQEK K+YGRLKA
Sbjct: 322 KFIDTSSKFGHGRFQSTQEKQKFYGRLKA 350
>gi|414587234|tpg|DAA37805.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
gi|414588490|tpg|DAA39061.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
gi|414866106|tpg|DAA44663.1| TPA: hypothetical protein ZEAMMB73_480377 [Zea mays]
Length = 337
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/337 (87%), Positives = 319/337 (94%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTHIVR+VEKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+E
Sbjct: 1 MTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSE 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
EVRRRFYKNWCKSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMK
Sbjct: 61 EVRRRFYKNWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMK 120
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
GLKQKKAHLMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGV 180
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAG 240
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
QE+H A TEFDRTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSR
Sbjct: 241 QETHDASTEFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSR 300
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 301 LALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 337
>gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Chlamydomonas reinhardtii]
gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii]
Length = 386
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 300/389 (77%), Positives = 337/389 (86%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGF PRKR R +GKVK+FP+DD SKP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIE PP+VVVG VGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY DGKK I+A+L +KK+C VIRVLAHTQ++K+ G KKAH
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKL-GFGVKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VAQKVDFAY FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK SH A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+K+ITPMGGFPHYGVV+EDYL+IKGC G KKR +TLR+SLL QTSR ALEE+KL
Sbjct: 298 EFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAITLRRSLLPQTSRNALEEVKL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDT+SKFGHGRFQTT+EK K +GR KA
Sbjct: 358 KFIDTASKFGHGRFQTTEEKLKTFGRTKA 386
>gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii]
gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix]
Length = 384
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 298/386 (77%), Positives = 335/386 (86%), Gaps = 3/386 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGF PRKR R +GKVK+FP+DD SKP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGKGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIE PP+VVVG VGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY DGKK I+A+L +KK+C VIRVLAHTQ++K+ G KKAH
Sbjct: 121 NWYKSKKKAFTKYAKKY--SDGKKAIEAELAALKKHCCVIRVLAHTQVKKL-GFGVKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VAQKVDFAY FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK SH A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGDASHLATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+K+ITPMGGFPHYGVV+EDYL+IKGC G KKR +TLR+SLL QTSR ALEE+KL
Sbjct: 298 EFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAITLRRSLLPQTSRNALEEVKL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KFIDT+SKFGHGRFQTT+EK K +GR
Sbjct: 358 KFIDTASKFGHGRFQTTEEKLKTFGR 383
>gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/388 (74%), Positives = 336/388 (86%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR+G+LGFLP+KR+ R RGKVK+FPKDD SKP LTAF+G+KAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRYGNLGFLPKKRSKRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK+HKKETCE+VTIIE P L+VVG+VGYV+TP+GLR TVWA+HLN+EVRRRFYK
Sbjct: 61 DKPGSKMHKKETCESVTIIECPELIVVGLVGYVRTPKGLRGKKTVWAEHLNDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKYTK Y KD L+++KK C VIRV+AHTQ+RK+ GLKQKKAH
Sbjct: 121 NWFKSKKKAFTKYTKNYTNGSIDKD----LDELKKSCDVIRVIAHTQVRKVSGLKQKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG VA KVDF Y FEK +P+D VFQ+DEMID+IGVTKGKGYEGVVTRWGVTR
Sbjct: 177 IMEIQVNGGDVAAKVDFGYALFEKAVPVDTVFQQDEMIDLIGVTKGKGYEGVVTRWGVTR 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKV CIGAWHP+RVS+TVARAGQ+GYHHRTE+NKK+YK+GKA Q+S A T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPSRVSYTVARAGQHGYHHRTEINKKVYKIGKAGQDSFGAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D TEK+ITPMGGF HYG+V DY++IKG VGP+KR++T+RQSL KQT R+A E+I L
Sbjct: 297 FHDPTEKEITPMGGFAHYGIVKHDYVMIKGGVVGPRKRLITMRQSLFKQTRRVATEKITL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT++EKAK +G K
Sbjct: 357 KFIDTSSKFGHGRFQTSEEKAKVFGTTK 384
>gi|357443615|ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula]
gi|355481133|gb|AES62336.1| L3 Ribosomal protein [Medicago truncatula]
Length = 337
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 297/337 (88%), Positives = 323/337 (95%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTHIVR+VEKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+E
Sbjct: 1 MTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSE 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
E++RRFYKNWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIRVLAHTQIRKMK
Sbjct: 61 EIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMK 120
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
GLKQKKAH+MEIQVNGG++AQKVDFAY FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGV
Sbjct: 121 GLKQKKAHIMEIQVNGGTIAQKVDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGV 180
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK
Sbjct: 181 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVG 240
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
+E+H A TEFDRTEKDITPMGGFPHYG+V ED+L+IKG CVGPKKRV+TLRQSLLKQTSR
Sbjct: 241 EETHDAQTEFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSR 300
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LALE+IKLKFIDTSSKFGHGRFQTT EK K+YGRLKA
Sbjct: 301 LALEDIKLKFIDTSSKFGHGRFQTTSEKQKFYGRLKA 337
>gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 387
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 288/389 (74%), Positives = 332/389 (85%), Gaps = 2/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DDP+ P LTAFLG+KAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDPTSPPHLTAFLGFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKET EAVTI+ETP ++VVGVVGYVKTP+GLR+L TVWA+HL+ E++RRFYK
Sbjct: 61 DKPGSKLHKKETLEAVTIVETPAMIVVGVVGYVKTPQGLRALNTVWAEHLSVEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY KKY G I +L+ +KK V+RV+AHTQ+RK+K LKQKKAH
Sbjct: 121 NWYKSKRKAFTKYEKKYANGSGA--IDQELDALKKNADVVRVIAHTQVRKVKNLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGSVA KVDFAY FFEK +P+DAVF KDEMID I VTKGKG+EGVVTRWGVTR
Sbjct: 179 MMEIQVNGGSVADKVDFAYKFFEKAVPVDAVFAKDEMIDCISVTKGKGFEGVVTRWGVTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKV CIGAWHPARV +TVAR GQ+GYHHRTE+NKKIY++GK SH A T
Sbjct: 239 LPRKTHRGLRKVGCIGAWHPARVGYTVARPGQHGYHHRTEINKKIYRVGKEGDSSHKAST 298
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEKDITPMGGFPHYG+V DYL+IKG GP+KR++TLR+SL KQT R+A E I +
Sbjct: 299 DHDATEKDITPMGGFPHYGIVRNDYLMIKGGIAGPRKRLITLRRSLFKQTRRVATETIAI 358
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQT++EKAK YGR+KA
Sbjct: 359 KFIDTSSKFGHGRFQTSEEKAKTYGRVKA 387
>gi|414588491|tpg|DAA39062.1| TPA: hypothetical protein ZEAMMB73_842297 [Zea mays]
Length = 347
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/325 (86%), Positives = 307/325 (94%)
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
++LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWCK
Sbjct: 23 TELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCK 82
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAHLMEI
Sbjct: 83 SKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEI 142
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
QVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK
Sbjct: 143 QVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 202
Query: 245 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
THRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFDR
Sbjct: 203 THRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFDR 262
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
TEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID
Sbjct: 263 TEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 322
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLKA 389
TSSKFGHGRFQTT EK +++G+LKA
Sbjct: 323 TSSKFGHGRFQTTDEKQRFFGKLKA 347
>gi|255641019|gb|ACU20789.1| unknown [Glycine max]
Length = 323
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/319 (90%), Positives = 312/319 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PCRLT F+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCRLTTFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L T+WAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIRVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V QKVD+AY FFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NK+IYK+ KA QESHSA+T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKRIYKVAKADQESHSAIT 300
Query: 301 EFDRTEKDITPMGGFPHYG 319
EFDRTEKDITPMGGFPHYG
Sbjct: 301 EFDRTEKDITPMGGFPHYG 319
>gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299]
gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299]
Length = 385
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 292/389 (75%), Positives = 334/389 (85%), Gaps = 4/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR G LGFLP+KR+ R RGK K FP+DD SK LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHRKFEHPRLGHLGFLPKKRSQRARGKCKKFPRDDASKEPHLTAFMGFKAGMTHVVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKET EAVTI+ETP +VVVGVVGYVKTP+GLR+L TVWA+HLN+E+RRRFYK
Sbjct: 61 DKPGSKLHKKETLEAVTIVETPAMVVVGVVGYVKTPQGLRALNTVWAEHLNDEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY IQ +L+ ++K V+RV+AHTQ+RK+K LKQKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYTNGT----IQQELDNLRKNADVVRVIAHTQVRKVKNLKQKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG A KVDFAY FFEK IP+DAVF KDEMID I V+KGKG+EGVVTRWGVTR
Sbjct: 177 VMEIQVNGGDAAAKVDFAYKFFEKAIPVDAVFNKDEMIDCISVSKGKGFEGVVTRWGVTR 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKV CIGAWHPARV+FTVAR GQ+GYHHRTE+NKKIY++GK ++SH A T
Sbjct: 237 LPRKTHRGLRKVGCIGAWHPARVAFTVARPGQHGYHHRTEINKKIYRVGKEGEDSHKATT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+KDITPMGGFPHYG+V DYL+IKG GP+KRV+TLRQSL KQTSR+A EEI +
Sbjct: 297 EHDATDKDITPMGGFPHYGIVKNDYLMIKGGIAGPRKRVITLRQSLFKQTSRVAQEEIAI 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQT +EKAK YGR+KA
Sbjct: 357 KFIDTSSKFGHGRFQTAEEKAKTYGRVKA 385
>gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens]
Length = 393
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/391 (70%), Positives = 336/391 (85%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGFLP+KR H G+V++FPKDD SKPC LTAF+ YKAGMTH+VRDV
Sbjct: 1 MSHRKFEAPRHGNLGFLPKKRTRHHHGRVRSFPKDDASKPCHLTAFMAYKAGMTHVVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE EAVT++E PP+VVVG+VGYV+TPRGLRSL TVWA L+EEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLATVWAAFLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYE-TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KSK+KA TKY KY +D G+KD+ +LE++KKYC+V+RV+AHTQ++K+K L+QKKA
Sbjct: 121 NWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSVVRVIAHTQVKKLK-LRQKKA 179
Query: 180 HLMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
H+MEIQVNGG+ VA KVD+A G FE+++P+D VF +EMID++G T+G G EGVVTRWGV
Sbjct: 180 HVMEIQVNGGADVAAKVDYAKGLFEQEVPVDTVFNANEMIDVLGATRGHGTEGVVTRWGV 239
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
TRLPRKTHRGLRKVACIGAWHP+RVSFTVAR+GQNGYHHRTEMNKKIY++GK S ++ SA
Sbjct: 240 TRLPRKTHRGLRKVACIGAWHPSRVSFTVARSGQNGYHHRTEMNKKIYRIGK-SGDAKSA 298
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE D TEK ITPMGGFPHYG VNED++++KGC VG KKR +TLRQSL+ + R LEE+
Sbjct: 299 STEADLTEKSITPMGGFPHYGEVNEDWIMVKGCVVGSKKRCLTLRQSLIAHSKRAHLEEV 358
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LKFIDTSSKFGHGRFQT +EKAK+ G L +
Sbjct: 359 NLKFIDTSSKFGHGRFQTDEEKAKFLGPLAS 389
>gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
Length = 386
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 341/389 (87%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGF PRKR R RGKVK+FP+DD SKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRSGSLGFSPRKRCRRGRGKVKSFPRDDASKPVHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIE PP+VVVGVVGYVKTPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPPMVVVGVVGYVKTPRGLRSLNTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY DGKK I+A+L +KK+C+VIRVLAHTQ++K+ G QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKY--SDGKKAIEAELASLKKHCSVIRVLAHTQVKKL-GFGQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGG+VAQKVDFAY FEKQ+ +DAVFQ +EMID I +TKG G +GVV RWGVTR
Sbjct: 178 LIEIQVNGGTVAQKVDFAYAMFEKQVSVDAVFQPNEMIDTIAITKGHGVQGVVQRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+HHRTE+NKK+YK+GK + SH A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFHHRTEINKKVYKIGKKGEASHLATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD T+K+ITPMGGFPHYGVVNEDY+++KG G KKR +TLR+SLL QTSR ALEEIKL
Sbjct: 298 DFDVTKKEITPMGGFPHYGVVNEDYIMVKGAVPGTKKRAITLRRSLLPQTSRNALEEIKL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDT+SKFGHGRFQTT+EK K YGR+KA
Sbjct: 358 KFIDTASKFGHGRFQTTEEKLKTYGRIKA 386
>gi|384248786|gb|EIE22269.1| ribosomal protein L3 component of cytosolic 80S ribosome and 60S
large subunit [Coccomyxa subellipsoidea C-169]
Length = 390
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 289/389 (74%), Positives = 337/389 (86%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLP+KR R +GK+K+FP+DDPSKPC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPKKRCRRGKGKIKSFPRDDPSKPCHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKET EAVTIIETPP++VVGVVGYV T GLRSL TVWA+HL+ EV+R+FYK
Sbjct: 61 EKPGSKLHKKETAEAVTIIETPPMIVVGVVGYVITATGLRSLNTVWAEHLSNEVKRKFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K+KKKAF +Y KKY DGKK I+ +L ++KK C+VIRVLAHTQI K+ G QKKAH
Sbjct: 121 NWFKAKKKAFHRYAKKY--TDGKKTIEEELNQLKKNCSVIRVLAHTQITKI-GYGQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EIQ+NGGS+ KVDFAY FEK + +D++FQ +EMID I +TKG+G EGVVTRWGVTR
Sbjct: 178 MSEIQINGGSIEDKVDFAYQLFEKPVTVDSIFQANEMIDTIAITKGRGTEGVVTRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQ+G+HHRTEMNKK+YK+GK +ESH A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVSWTVARAGQHGFHHRTEMNKKVYKIGKKGEESHKATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D T K+ITPMGGFPHYG++NEDY+++KG G KKR +TLR+SL+ QTSR ALEEIKL
Sbjct: 298 EYDVTNKEITPMGGFPHYGMINEDYIMLKGAVPGTKKRCITLRRSLVAQTSRTALEEIKL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHGRFQT+ EK K GRLKA
Sbjct: 358 KFIDTSSKFGHGRFQTSDEKFKTLGRLKA 386
>gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
Length = 389
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/387 (72%), Positives = 332/387 (85%), Gaps = 4/387 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRKFE PRHG LGFLP+KR HRG+V+ FP+DD SK LTAF+G+KAGMTHIVR+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE E V+I+ETPP+VV+GVVGY++TPRGLR+L TV+A+HL+EEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY KKY+T DI+ +L ++KKYC V+RVLAHTQ+RK+K L+QKKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVK-LRQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+E+QVNGGSVA KVDFA FEKQ+P+ AVF KDEMID+IGVTKG G EGV+TRWGVTR
Sbjct: 178 LLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGVEGVITRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKKIY++G A+ + S MT
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRVG-AAGDKKSCMT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEKDITP+GGFPHYGV+NED+L+IKG VG KKR +TLR+SLL T R ALEEI L
Sbjct: 297 EQDLTEKDITPLGGFPHYGVINEDWLMIKGAIVGTKKRALTLRKSLLVHTKRSALEEINL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDTSSKFGHGRFQT +EKAK+ G L
Sbjct: 357 KFIDTSSKFGHGRFQTAEEKAKWMGPL 383
>gi|390601087|gb|EIN10481.1| 60S ribosomal protein L3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 388
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/388 (70%), Positives = 333/388 (85%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK D+G K +Q +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKAAEDNG-KSVQRELERIRKYCTVVRVLAHTQIRKT-GLAQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KVDFA+G FEK I +++VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVDFAHGLFEKPIEVNSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+T+R+SL+ TSR LE+++L
Sbjct: 298 ESDVTKKTITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHG FQT +EKA + G LK
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKAAFLGTLK 385
>gi|348687785|gb|EGZ27599.1| hypothetical protein PHYSODRAFT_284116 [Phytophthora sojae]
Length = 389
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/387 (71%), Positives = 331/387 (85%), Gaps = 4/387 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRKFE PRHG LGFLP+KR HRG+V+ FP+DD SK LTAF+GYKAGMTHI+R+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIMREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE E V+I+ETPP+VV+GVVGY++TPRGLR+L TV+A+HL+EEV+RRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLTTVFAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY KKY+T DI+ +L ++KKYC V+RVLAHTQ+RK+K L+QKKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYQTAPA--DIENELNRIKKYCQVVRVLAHTQVRKVK-LRQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+E+QVNGGSV KVDFA FEKQ+P+ AVF KDEMID+IGVTKG G EGV+TRWGVTR
Sbjct: 178 LLEVQVNGGSVGDKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQ+GYHHRTE+NKKIY++G A+ + S MT
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINKKIYRIG-AAGDKKSCMT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEKDITP+GGFPHYG++NED+L+IKG VG KKR +TLR+SLL T R ALEEI L
Sbjct: 297 EQDLTEKDITPLGGFPHYGIINEDWLMIKGAIVGTKKRALTLRKSLLVHTKRSALEEINL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDTSSKFGHGRFQT +EKAK+ G L
Sbjct: 357 KFIDTSSKFGHGRFQTAEEKAKWMGPL 383
>gi|412994087|emb|CCO14598.1| 60S ribosomal protein L3 [Bathycoccus prasinos]
Length = 413
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/382 (71%), Positives = 326/382 (85%), Gaps = 4/382 (1%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
+PR G LGFLP+KR+ R RGKVK+FPKDD SKP TAF+G+KAGMTHIVRDV+KPGSKL
Sbjct: 36 NPRLGHLGFLPKKRSQRSRGKVKSFPKDDASKPPHFTAFMGFKAGMTHIVRDVDKPGSKL 95
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
HKKETCEAVTI+E P ++VVG+VGY +TP+GLR + TVWA+HL++E++RRFYKNW KSKK
Sbjct: 96 HKKETCEAVTIVECPQMIVVGLVGYRRTPQGLRGVKTVWAEHLSDEIKRRFYKNWFKSKK 155
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
KAF KY KKY I+ LE +KK C V+RV+AHTQ+RK+K LKQKKAH+MEIQ+N
Sbjct: 156 KAFQKYAKKYSNGS----IEQDLEALKKSCDVVRVIAHTQVRKVKNLKQKKAHMMEIQIN 211
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
GGSVA KVDF + FFEK +P+DAVFQ+DEMID+I VTKGKG+EGV+TRWGVTRLPRKTHR
Sbjct: 212 GGSVADKVDFGFKFFEKAVPVDAVFQQDEMIDVIAVTKGKGFEGVITRWGVTRLPRKTHR 271
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEK 307
GLRKVACIG+WHPARV+++VAR GQ+GYHHRTE+NKKIYK+GKA + S A T+ D TEK
Sbjct: 272 GLRKVACIGSWHPARVAYSVARPGQHGYHHRTEINKKIYKIGKADEASFGANTDHDPTEK 331
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
+ITPMGGF HYG+V DY++IKG +GP+KR++TLRQSL KQT R+A E+I LKFIDTSS
Sbjct: 332 EITPMGGFGHYGIVKNDYVMIKGAVIGPRKRLITLRQSLFKQTRRVATEKITLKFIDTSS 391
Query: 368 KFGHGRFQTTQEKAKYYGRLKA 389
K GHGRFQT +EKAK YG LKA
Sbjct: 392 KMGHGRFQTAEEKAKTYGTLKA 413
>gi|395328899|gb|EJF61289.1| 60S ribosomal protein L3 [Dichomitus squalens LYAD-421 SS1]
Length = 388
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/389 (69%), Positives = 332/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAILGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HK+E EAVTI+ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 ERPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV KV+FA+G FEK + + +VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVVDKVEFAHGLFEKPVEVSSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G+ + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGRGEDDG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGFPHYG+V DYL++KG G KKRV+T+R+SL+ TSR LE+++L
Sbjct: 298 EHDITKKTITPLGGFPHYGIVKNDYLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKAAFLGTLKA 386
>gi|443731990|gb|ELU16883.1| hypothetical protein CAPTEDRAFT_21042 [Capitella teleta]
Length = 414
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 273/394 (69%), Positives = 333/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR++RHRGKVKAFPKDDPSKP LT+FL YKAGMTH+VR+V
Sbjct: 11 MSHRKFSAPRHGSLGFLPRKRSTRHRGKVKAFPKDDPSKPVHLTSFLAYKAGMTHVVREV 70
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HKKE +AVTI+E PP++ +GV+GY++TPRGLR+L TVWA+HL+EE RRRFYK
Sbjct: 71 DRPGSKAHKKEVVDAVTILEAPPMIAIGVIGYIETPRGLRALKTVWAEHLSEECRRRFYK 130
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTK +KK++ + GKK+I+ L KMKKYC+VIRV+AHTQ++ +K +QKKAH
Sbjct: 131 NWYRSKKKAFTKASKKWQDEVGKKEIEKDLAKMKKYCSVIRVIAHTQMKLLKK-RQKKAH 189
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+VAQKVD+A FEKQIP+D+VF DEMID IGVTKG G++GV +RW +
Sbjct: 190 IMEIQVNGGTVAQKVDWAREHFEKQIPVDSVFAPDEMIDCIGVTKGHGFKGVTSRWHTKK 249
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM- 299
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIY++GK + +
Sbjct: 250 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYRMGKGVHTENGKLI 309
Query: 300 -----TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
TE+D TEK ITPMGGFPHYG VN+D++++ GCC+GPKKRV+TLR+SLL T R A
Sbjct: 310 KNNGSTEYDVTEKTITPMGGFPHYGEVNQDFIMLGGCCMGPKKRVITLRKSLLTHTKRKA 369
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE++ LKFIDTSSKFGHGRFQT QEK + G LK
Sbjct: 370 LEKMNLKFIDTSSKFGHGRFQTHQEKRNFMGPLK 403
>gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina
98AG31]
Length = 388
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/389 (71%), Positives = 331/389 (85%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+EHPRHGS GFLPRKRA+RHRGKVK+FP+DD +KP LTA LGYKAGMTHIVR++
Sbjct: 1 MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPRDDKTKPVHLTAMLGYKAGMTHIVREL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HK+E EAVTIIETPP+V+VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 ERPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKY-ETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW +SKKKAFTKY KK+ E+ G I +LE+++KYCTV+RVLAHTQIRK GLKQKKA
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKT-GLKQKKA 177
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
HLMEIQVNGGSVA KVDFA FEK + ++F++DE ID+I VTKGKG+EGV RWG
Sbjct: 178 HLMEIQVNGGSVADKVDFAKSHFEKTFDVSSIFEQDENIDVIAVTKGKGFEGVTHRWGTK 237
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+LPRKTH+GLRKVACIGAWHP++V FTVARAGQNGYHHRTE+NKK++++GK E+ +A
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSKVMFTVARAGQNGYHHRTELNKKVFRVGKGGDEA-NAT 296
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD T+K ITPMGGF YGVVN D+L++KG G KKRV+TLR+SL+ TSR LE+I
Sbjct: 297 TEFDTTKKAITPMGGFVRYGVVNNDFLMLKGSVPGVKKRVITLRKSLMTHTSRRDLEKIH 356
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT EK+ + G+LK
Sbjct: 357 LKFIDTSSKFGHGRFQTAAEKSAFMGQLK 385
>gi|452819751|gb|EME26804.1| 60S ribosomal protein L3 isoform 2 [Galdieria sulphuraria]
gi|452819752|gb|EME26805.1| 60S ribosomal protein L3 isoform 1 [Galdieria sulphuraria]
Length = 388
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 330/389 (84%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKRA R RG++KAFPKDD SKPC LT FL YKAGMTH+VRDV
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRARRQRGRIKAFPKDDSSKPCHLTGFLSYKAGMTHVVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EAVTI+E PP+VVVG+VGY++TPRGLRSL TVWA+HL++E +RRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTILEAPPMVVVGIVGYIETPRGLRSLKTVWAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTK-KYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KSKKKAFTKY K KYE G + I+ LEKMKKYC+VIRVL HTQ+RK+ + QKKA
Sbjct: 121 NWYKSKKKAFTKYAKVKYE--QGGEAIKRDLEKMKKYCSVIRVLVHTQMRKLN-IGQKKA 177
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+ EIQVNGG+VA+KVDFA G FEK + +D VF KDEMID IGVTKGKG+EGV+ RWGVT
Sbjct: 178 HIAEIQVNGGTVAEKVDFATGLFEKTVSVDQVFSKDEMIDAIGVTKGKGFEGVIHRWGVT 237
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
RLPRKTHRGLRKVACIGAWHPAR+ F+V RAGQNGYHHRT+MN KIY++ K + S
Sbjct: 238 RLPRKTHRGLRKVACIGAWHPARIQFSVPRAGQNGYHHRTQMNLKIYRIAKGNNLK-SGS 296
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK ITP+GGFPHYG+VNED+L+++G +GP+KRV+TLR+SL QTSR A EEI
Sbjct: 297 TEFDLTEKAITPIGGFPHYGIVNEDFLMVRGSVLGPRKRVITLRKSLYTQTSRYAQEEIN 356
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT QEK ++ G LK
Sbjct: 357 LKFIDTSSKFGHGRFQTHQEKQRFLGSLK 385
>gi|336373266|gb|EGO01604.1| hypothetical protein SERLA73DRAFT_132009 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386114|gb|EGO27260.1| 60S ribosomal protein L3 [Serpula lacrymans var. lacrymans S7.9]
Length = 388
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/389 (69%), Positives = 331/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FP+DDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTATMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTI+ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ D+GK + +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNGKSTAR-ELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+F++ FEK + + +VF++DE ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFSHNLFEKPVEVTSVFEQDENIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G A + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-AGTDDGNAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+TLR+SL+ TSR LE+++L
Sbjct: 298 ESDITKKAITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITLRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGSFQTFEEKAAFLGTLKA 386
>gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior]
Length = 484
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 332/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 71 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 130
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 131 DRPGSKVNKKEIVEAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYK 190
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I+A L+K+KKYC+V+R++AHTQ++ ++ +QKKAH
Sbjct: 191 NWYKSKKKAFTKASKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLRQ-RQKKAH 249
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A EK +PI +VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 250 IMEIQLNGGTIEDKVQWAREHLEKPVPISSVFASDEMIDVIGVTKGKGYKGVTSRWHTKK 309
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 310 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 369
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 370 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSA 429
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G+LK
Sbjct: 430 LEKINLKFIDTSSKFGHGRFQTAADKASFMGQLK 463
>gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/389 (69%), Positives = 325/389 (83%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVTIIETPP++ VG+VGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTIIETPPMIAVGLVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK +DG K +Q +LE+++KYC+V+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKK-NAEDGGKSVQRELERIRKYCSVVRVLAHTQIRKT-GLAQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KVDF Y FEK I + +VF++DE +D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQINGGSVADKVDFGYKLFEKPIEVSSVFEQDENVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V F+VARAGQNGYHHRTE+NKKIY++G S + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSNVMFSVARAGQNGYHHRTEINKKIYRIGLGSDDG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGFPHYGVV D+LL+KG G KKRV+T+R+SL+ TSR LE++ L
Sbjct: 298 ESDITKKVITPLGGFPHYGVVKNDFLLVKGSIPGTKKRVITIRKSLMVHTSRRDLEKVTL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT QEK + G LK+
Sbjct: 358 KFIDTSSKFGHGSFQTVQEKHAFLGTLKS 386
>gi|402217655|gb|EJT97735.1| 60S ribosomal protein L3 [Dacryopinax sp. DJM-731 SS1]
Length = 395
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 328/388 (84%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG+LGFLPRKRA+RHRGKVK+FPKDDP K LTA + YKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGNLGFLPRKRAARHRGKVKSFPKDDPKKKPHLTAAMAYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLRSL TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTILETPPMIVVGVVGYVETPRGLRSLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y KK+ ++G K I +LE+++KYCTV+RVLAHTQ+ K GL+QKKAH
Sbjct: 121 NWYKSKKKAFTRYAKKH-AENGGKSIARELERIRKYCTVVRVLAHTQLSKT-GLRQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV +KVDFA G FEK + I +F++DE +D+I VTKG G+EGV RWG R
Sbjct: 179 LMEIQVNGGSVGEKVDFAKGLFEKPVEISTIFEQDECVDVIAVTKGHGFEGVTHRWGTKR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + ES +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGADES-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+T+R+SL+ TSR LE+I+L
Sbjct: 298 EADTTKKTITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEQIQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHG FQT +EKA + G LK
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKASFLGALK 385
>gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis]
Length = 386
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 290/389 (74%), Positives = 338/389 (86%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLP+KR R +GKVK+FPKDD +KP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRCKRGKGKVKSFPKDDQTKPPHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKE EAVTIIETPP+VVVG+VGYVKT RG+RSL TVWA+HL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKEAAEAVTIIETPPMVVVGIVGYVKTTRGMRSLNTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTKY KKY DGKK+++A++ ++KK+C VIRVLAHTQIRK+ + QKKAH
Sbjct: 121 SWYKSKKKAFTKYVKKYA--DGKKEVEAEVAELKKHCCVIRVLAHTQIRKVP-VGQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFAYG EK + ++ VF + EM+D I +TKG G EGVVTRWGV+R
Sbjct: 178 LMEIQVNGGSVAAKVDFAYGLLEKAVSVNTVFNQSEMVDAIAITKGHGTEGVVTRWGVSR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV +TVAR+G G++HRTEMNKK+Y++G +ESH+A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPARVGWTVARSGAMGFNHRTEMNKKVYRIGVKGEESHAATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T KDITPMGGFPHYGVV EDY++IKG C G K+RV+TLR+SL KQTSR ALEE+KL
Sbjct: 298 EHDVTVKDITPMGGFPHYGVVKEDYVMIKGACPGVKRRVITLRKSLFKQTSRSALEEVKL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDT+SKFG+GRFQT++EKAK GRLKA
Sbjct: 358 KFIDTASKFGNGRFQTSEEKAKTLGRLKA 386
>gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi]
gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi]
Length = 430
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 265/391 (67%), Positives = 329/391 (84%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 35 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 94
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVT++ETPP+++VGVVGY+ TPRG R TVWA+HL+E+ RRRFYK
Sbjct: 95 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 154
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG K IQA L KMKKYC++IRV+AHTQ++ MK ++KKAH
Sbjct: 155 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKH-REKKAH 213
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V +KVD+AY FEKQ+P+D+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 214 IMEIQVNGGTVPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKK 273
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHS 297
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++ K+ + +
Sbjct: 274 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKSCLTEEGRRN 333
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
T++D TEK I PMGGFPHYG+VN+D++LI+GCC+G KKR +TLR+SL+ QT R A E+
Sbjct: 334 GGTDYDITEKSINPMGGFPHYGLVNQDFVLIRGCCMGSKKRPITLRKSLITQTKRFAYEK 393
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSKFGHGRFQT EK + G+LK
Sbjct: 394 INLKWIDTSSKFGHGRFQTHAEKKAFMGKLK 424
>gi|170111497|ref|XP_001886952.1| 60S ribosomal protein L3 [Laccaria bicolor S238N-H82]
gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 388
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 263/389 (67%), Positives = 328/389 (84%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP++VVG+VGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMIVVGLVGYVETPRGLRTLTTVWASHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K + +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSVARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KV+F FEK + + VF++DE +D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQLNGGSIADKVEFGQALFEKPVEVSTVFEQDECVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITPMGGFPHYG+V D+L++KG G KKRV+T+R+SL+ TSR LE+++L
Sbjct: 298 ESDITNKSITPMGGFPHYGIVKNDFLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EK+ + G LKA
Sbjct: 358 KFIDTSSKFGHGSFQTFEEKSAFLGTLKA 386
>gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii]
Length = 404
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 271/394 (68%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVKAFPKDD SKPC LTAF+GYKAGMTHIVR V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKAFPKDDQSKPCHLTAFVGYKAGMTHIVRQV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTIIETPPL+VVGVVGY+ TPRG R+L T+WA+HLNEE RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTIIETPPLMVVGVVGYIDTPRGQRTLKTIWAEHLNEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW ++KKKAFTK +KK+ D GK+ I+ MKKYC VIR+LAHTQ+R M +QKKAH
Sbjct: 121 NWYRAKKKAFTKASKKWGDDGGKQAIEKDFNAMKKYCKVIRILAHTQMRLM-NQRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQ+NGG++A+KVD+A E QIP+ VF +DEMID+IGVTKGKG++GV +RWG +
Sbjct: 180 IIEIQINGGTIAEKVDWAREKLESQIPVTQVFVQDEMIDVIGVTKGKGFKGVTSRWGTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTELNKKVYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D+T+KDITP+GGFPHYGVV D+L++KGC +GPKKRV+TLR+SLL QTSR A
Sbjct: 300 KNNAATEYDQTDKDITPLGGFPHYGVVKNDFLMLKGCVIGPKKRVLTLRKSLLTQTSRKA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDTSSKFGHGRFQT EK + G LK
Sbjct: 360 TEKITLKFIDTSSKFGHGRFQTGIEKQTFMGPLK 393
>gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 388
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/389 (70%), Positives = 328/389 (84%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+EHPRHGS GFLPRKRA+RHRGKVK+FP DD +KP LTA LGYKAGMTHI+RD+
Sbjct: 1 MSHRKWEHPRHGSTGFLPRKRAARHRGKVKSFPVDDKTKPVHLTAMLGYKAGMTHILRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTI+ETPP+V+VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIVETPPMVIVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKY-ETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW +SKKKAFTKY KK+ E+ G I +LE+++KYCTV+RVLAHTQIRK GLKQKKA
Sbjct: 121 NWYRSKKKAFTKYAKKHAESSTG--SIARELERIRKYCTVVRVLAHTQIRKT-GLKQKKA 177
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
HLMEIQVNGGSVA KVDFA FEK + +VF+++E ID+I VTKGKGYEGV RWG
Sbjct: 178 HLMEIQVNGGSVADKVDFAKSHFEKTFDVSSVFEQNENIDVIAVTKGKGYEGVTHRWGCK 237
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+LPRKTH+GLRKVACIGAWHP++V FTVARAGQ+GYHHRTE+NKK++++GK E+ +A
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSKVMFTVARAGQDGYHHRTELNKKVFRVGKGGDEA-NAT 296
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD T K ITPMGGF YGVV D+L++KG G KKRV+TLR+SL+ TSR LE+I
Sbjct: 297 TEFDTTTKAITPMGGFVRYGVVKNDFLMLKGSVPGVKKRVITLRKSLMTHTSRRDLEKIN 356
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT EK+ + G+LK
Sbjct: 357 LKFIDTSSKFGHGRFQTAAEKSAFMGQLK 385
>gi|148235098|ref|NP_001091345.1| uncharacterized protein LOC100037184 [Xenopus laevis]
gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis]
Length = 405
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 285/398 (71%), Positives = 330/398 (82%), Gaps = 10/398 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FP+DD SKPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRTRRHRGKVKSFPRDDASKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSK-LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+PGSK LH KE EAVTIIETPP+VVVGVVGYV TPRGLR+L TVWAQ+L+EE +RRFY
Sbjct: 61 IRPGSKALHNKEIVEAVTIIETPPMVVVGVVGYVATPRGLRALTTVWAQNLSEECKRRFY 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK---Q 176
K W KSKKKAFTKY KKYETD GKK+I +LE++KKYC+V+RV+AHTQ+ KM+G + Q
Sbjct: 121 KTWYKSKKKAFTKYAKKYETDAGKKEIDHELERIKKYCSVVRVIAHTQMSKMRGARADRQ 180
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 236
+KAH+ME+QVNGGSVA KVDFA G FE+Q+P+ +VF ++E +DII VTKGKG+EGV RW
Sbjct: 181 RKAHIMEVQVNGGSVADKVDFARGLFEQQVPVKSVFGQNENVDIIAVTKGKGFEGVTFRW 240
Query: 237 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE-- 294
GV +L RKTHRGLRKVACIGAWHPARV FTV RAGQNGYHHRTE+NKKIY++G
Sbjct: 241 GVKKLQRKTHRGLRKVACIGAWHPARVGFTVPRAGQNGYHHRTELNKKIYRIGDGIHTKD 300
Query: 295 ----SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQT 350
++A T++D TEK ITPMGGFPHYG VN D+++IKGCC G KKRV+TLR+SL+ T
Sbjct: 301 GKVVKNNASTDYDLTEKSITPMGGFPHYGEVNNDFIMIKGCCAGVKKRVITLRKSLMVHT 360
Query: 351 SRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
R LEEI LKFIDTSSKFGHGRFQT EK + G LK
Sbjct: 361 KRAHLEEINLKFIDTSSKFGHGRFQTQAEKKAFMGLLK 398
>gi|402589180|gb|EJW83112.1| 50S ribosomal protein L3 [Wuchereria bancrofti]
Length = 396
Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust.
Identities = 264/391 (67%), Positives = 329/391 (84%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVT++ETPP+++VGVVGY+ TPRG R TVWA+HL+E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG K IQA L KMKKYC++IRV+AHTQ++ MK ++KKAH
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQMKVMKH-REKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ +KVD+AY FEKQ+P+D+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTIPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHS 297
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++ K+ + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIAKSCLTEEGRRN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
T++D TEK I PMGGFPHYG+VN+D++LI+GCC+G KKR +TLR+SL+ QT R A E+
Sbjct: 300 GGTDYDITEKSINPMGGFPHYGLVNQDFVLIRGCCMGSKKRPITLRKSLITQTKRFAYEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSKFGHGRFQT EK + G+LK
Sbjct: 360 INLKWIDTSSKFGHGRFQTHAEKKAFMGKLK 390
>gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 403
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 332/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KVD+A E+Q+P+ +VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTAEEKKSFMGPLK 393
>gi|380012028|ref|XP_003690092.1| PREDICTED: 60S ribosomal protein L3-like [Apis florea]
Length = 415
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I+ +K+ KYC V+R++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIVKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ QKV +A EK +P+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +K + G+LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKTSFMGQLK 393
>gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera]
Length = 415
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I+ +K+ KYC V+R++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIIKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ QKV +A EK +P+ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +K + G+LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKTSFMGQLK 393
>gi|224095133|ref|XP_002198398.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 403
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KVD+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMVKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLK 393
>gi|383848395|ref|XP_003699836.1| PREDICTED: 60S ribosomal protein L3-like [Megachile rotundata]
Length = 432
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 18 ISHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 77
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 78 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 137
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I++ +K+ KYC V+R++AHTQ++ ++ +QKKAH
Sbjct: 138 NWYKSKKKAFTKASKKWQDDLGRKSIESDFKKIIKYCKVVRIIAHTQMKLLR-QRQKKAH 196
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ QKV +A EK +PI VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 197 IMEIQLNGGTIEQKVQWAREHLEKPVPISNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 256
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 257 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 316
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 317 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLLVHTKRAA 376
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +K + G+LK
Sbjct: 377 LEKINLKFIDTSSKFGHGRFQTAADKVSFMGQLK 410
>gi|402244317|emb|CBW52776.1| 40S ribosomal protein L3 [Polytomella sp. Pringsheim 198.80]
Length = 384
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 284/389 (73%), Positives = 328/389 (84%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGF PRKR R RGKVK+FP+DD +KP LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEHPRCGSLGFSPRKRCRRGRGKVKSFPRDDSAKPAHLTAFIGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIE P +VVVGVVGY+KT RGLRSL VWAQHL+++++R+FYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIECPAMVVVGVVGYIKTTRGLRSLNAVWAQHLSDDLKRKFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKK AF Y KKY DGKK I+A+L ++KK+C+VIRVLAHTQ+RK+ QKK
Sbjct: 121 NWYKSKKAAFKNYAKKY---DGKK-IEAELAQLKKHCSVIRVLAHTQVRKLH-WGQKKPQ 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGGS++ KVDF Y FEK++ +DAVFQ +E ID I +TKG G +GVV RWGVTR
Sbjct: 176 LIEIQVNGGSISDKVDFGYKLFEKEVTVDAVFQTNEQIDTIAITKGHGVQGVVQRWGVTR 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ G+ HRTEMNKKIYK+GK SHSA T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVKWTVARAGQQGFFHRTEMNKKIYKIGKKDTASHSAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD T+KDITPMGGFPHYG+V ED+L+IKG G KKR +TLRQ+L QTSR ALEEIKL
Sbjct: 296 DFDVTKKDITPMGGFPHYGIVKEDFLMIKGAVPGTKKRPITLRQTLFPQTSRTALEEIKL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDT+SKFGHGRFQT++EKAK +GR+KA
Sbjct: 356 KFIDTASKFGHGRFQTSEEKAKTFGRVKA 384
>gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus]
gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus]
Length = 403
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 332/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KVD+A E+Q+P+ +VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTAEEKKSFMGPLK 393
>gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes]
gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes]
Length = 412
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+++VG VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMMIVGCVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I+ L+K+KKYC V+RV+AHTQ++ ++ +QKKA+
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIEKDLKKIKKYCKVVRVIAHTQMKLLR-QRQKKAN 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+A KV++A EK IP+ VF +DEMID+IGVTKGKG +GV +RW +
Sbjct: 180 IMEIQLNGGSIADKVEWAREHLEKPIPVSNVFAQDEMIDVIGVTKGKGTKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGRVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D++++KGCC+GPKKRV+TLR+SLL T R +
Sbjct: 300 KNNASTEYDLTEKSITPMGGFPHYGEVNNDFVMLKGCCMGPKKRVITLRKSLLVHTKRAS 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G+LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKASFMGQLK 393
>gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum]
gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum]
Length = 409
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+++VGVVGY++TP GLR+L T+WA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMMIVGVVGYIETPHGLRALATIWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ +K+ KYC V+RV+AHTQ+ K+ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWNDDLGKKSIERDFKKIIKYCKVVRVIAHTQM-KLLNQRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSV KV +A EK IP+ VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGSVVDKVQWAREHLEKPIPVAQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R+A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKAAFMGPLK 393
>gi|414587228|tpg|DAA37799.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 307
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 266/304 (87%), Positives = 288/304 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHTQIRKMKGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A T
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDAST 300
Query: 301 EFDR 304
EFDR
Sbjct: 301 EFDR 304
>gi|340368475|ref|XP_003382777.1| PREDICTED: 60S ribosomal protein L3-like [Amphimedon queenslandica]
Length = 402
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 324/388 (83%), Gaps = 1/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKPC LTA++GYKAGMTH VR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPCHLTAYMGYKAGMTHTVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSK HK E EAVTIIETPP+V VGVVGY++TPRGLR L T++AQH+ E+ +RRFYK
Sbjct: 61 NRPGSKSHKNEVVEAVTIIETPPMVCVGVVGYIETPRGLRQLKTIFAQHITEDCKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKK A+TK K++ + GK+ I+ EKMKKYC +IRVL HTQ+ K+K LKQKK+H
Sbjct: 121 NWYRSKKTAYTKAAKRWADEAGKEAIKQDFEKMKKYCKIIRVLCHTQLSKIKSLKQKKSH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A KV++A EK+IP+ VF+++E++D+IGVTKGKG++GV +RW +
Sbjct: 181 LMEIQVNGGTIADKVEWAKEHLEKEIPVSDVFEQNEVLDVIGVTKGKGFKGVTSRWHTKK 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTEMNKKIY++G A++E++ T
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEMNKKIYRIGSATEENNGG-T 299
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITPMGGFPHYGVVN D+L++KGC +GPKKRV+TLR+SLL R EEI L
Sbjct: 300 KSDLTKKRITPMGGFPHYGVVNNDFLMVKGCVMGPKKRVITLRKSLLVNFKRKDREEIDL 359
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT QEKA + G+LK
Sbjct: 360 KFIDTSSKFGHGRFQTAQEKANFMGKLK 387
>gi|126339540|ref|XP_001366844.1| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
Length = 476
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 74 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 133
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 134 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 193
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 194 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKSH 252
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V++K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 253 LMEIQVNGGNVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 312
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 313 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 372
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 373 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 432
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 433 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 466
>gi|345480304|ref|XP_001600115.2| PREDICTED: 60S ribosomal protein L3-like [Nasonia vitripennis]
Length = 426
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/397 (67%), Positives = 328/397 (82%), Gaps = 13/397 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPTKPVHLTAFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+ I+ +K+ KYC V+RV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRASIEKDFKKIVKYCKVVRVIAHTQMKLLRQ-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ KV +A EK IP++ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKSIPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS--- 297
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G QE H+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG---QEIHTKDG 296
Query: 298 ------AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T
Sbjct: 297 KIVKNNASTEYDLTEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLLVHTK 356
Query: 352 RLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
R ALE+I LKFIDTSSKFGHGRFQT +KA + G+LK
Sbjct: 357 RAALEKINLKFIDTSSKFGHGRFQTAADKASFMGQLK 393
>gi|340724650|ref|XP_003400694.1| PREDICTED: 60S ribosomal protein L3-like [Bombus terrestris]
Length = 414
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+E PP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I++ K+ KYC V+R++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIVAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A EK +P++ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVQWAREHLEKPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G+LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKASFMGQLK 393
>gi|350424727|ref|XP_003493892.1| PREDICTED: 60S ribosomal protein L3-like [Bombus impatiens]
Length = 414
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFVGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+E PP++VVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTILEAPPMIVVGVVGYIETPHGLRALTTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D G+K I++ K+ KYC V+R++AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGRKSIESDFAKIIKYCKVVRIIAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A E +P++ VF DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIVDKVQWAREHLENPVPVNNVFAPDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G+LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKASFMGQLK 393
>gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276]
gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii
WM276]
Length = 390
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 317/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLP+KRA+RHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ + G + +LE++KKYCTV+RVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK + + +VF++DE IDIIGVTKG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVEVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++ + S S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+KDITPMGGF YGVV D+++IKG CVGP KR+VTLR++L TSR E++ L
Sbjct: 298 EFDLTKKDITPMGGFVRYGVVKNDFVMIKGTCVGPVKRIVTLRKALRTHTSRAHTEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSS FGHGRFQ EK + G+LK
Sbjct: 358 KFIDTSSNFGHGRFQDAAEKNAFLGQLK 385
>gi|395819741|ref|XP_003783238.1| PREDICTED: 60S ribosomal protein L3 [Otolemur garnettii]
Length = 403
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117057|ref|XP_772755.1| 60S ribosomal protein L3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 390
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 317/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLP+KRA+RHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPKKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ + G + +LE++KKYCTV+RVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVARELERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK + + +VF++DE IDIIGVTKG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVTKGHGYEGVTARWGTTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++ + S S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+KDITPMGGF YGVV D+++IKG CVGP KR+VTLR++L TSR E++ L
Sbjct: 298 EFDLTKKDITPMGGFVRYGVVKNDFVMIKGTCVGPVKRIVTLRKALRTHTSRAHTEKVTL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSS FGHGRFQ EK + G+LK
Sbjct: 358 KFIDTSSNFGHGRFQDAAEKNAFLGQLK 385
>gi|343959926|dbj|BAK63820.1| 60S ribosomal protein L3 [Pan troglodytes]
Length = 403
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct]
Length = 404
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens]
gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta]
gi|397502001|ref|XP_003821661.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Pan paniscus]
gi|402884272|ref|XP_003905611.1| PREDICTED: 60S ribosomal protein L3 [Papio anubis]
gi|426394514|ref|XP_004063540.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Gorilla gorilla
gorilla]
gi|730565|sp|P39023.2|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR
RNA-binding protein B; Short=TARBP-B
gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens]
gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens]
gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens]
gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens]
gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens]
gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens]
gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens]
gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens]
gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens]
gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens]
gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens]
gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens]
gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens]
gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis]
gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis]
gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis]
gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct]
gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct]
gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens]
gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens]
gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct]
Length = 403
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|405123316|gb|AFR98081.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
grubii H99]
Length = 390
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/388 (69%), Positives = 316/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRG+ KAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEEPRHGSLAFLPRKRAARHRGRCKAFPKDDPKKPVHLTAVMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVG VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ + G + + E++KKYCTV+RVLAHTQI K GL+QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENSG-ASVAREFERIKKYCTVVRVLAHTQISKT-GLQQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK + + +VF++DE IDIIGV+KG GYEGV RWG TR
Sbjct: 179 LMEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVSKGHGYEGVTARWGTTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V F+VARAGQ GYH RT MN KIY++ + S S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMFSVARAGQRGYHSRTSMNHKIYRIANGASGS-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+KDITPMGGF YGVV D+++IKG CVGP KR+VTLR++L TSR E++ L
Sbjct: 298 EFDLTKKDITPMGGFVRYGVVKNDFVMIKGSCVGPVKRIVTLRKALRTHTSRAHTEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSS FGHGRFQ EK + G+LK
Sbjct: 358 KFIDTSSNFGHGRFQDAAEKNAFLGQLK 385
>gi|395541568|ref|XP_003772714.1| PREDICTED: 60S ribosomal protein L3-like [Sarcophilus harrisii]
Length = 428
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/393 (67%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V+
Sbjct: 27 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPTKPIHLTAFLGYKAGMTHIVREVD 86
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYKN
Sbjct: 87 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYKN 146
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKK+HL
Sbjct: 147 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKSHL 205
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGGSV++K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 206 MEIQVNGGSVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 265
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 266 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 325
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 326 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 385
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 386 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 418
>gi|332372868|gb|AEE61576.1| unknown [Dendroctonus ponderosae]
Length = 411
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAFLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSKRHRGKVKAFPKDDPSKPVHLTAFLGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGV+GY++TP GLRSLCTVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMIVVGVIGYIETPHGLRSLCTVWAEHLAEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAF+ K+ GKK I+ Q K+ KYC+ +RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKRKAFSSNATKWHDALGKKAIEKQFNKIIKYCSAVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++A KV +A EK IP++ VF +DE+ID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQINGGTIADKVAWAKEHLEKPIPVNQVFGQDEVIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D +EK ITPMGGFPHYG VN DY++IKGCC+GPKKRV+TLR+SLL TSR+A
Sbjct: 300 KNNASTAYDLSEKTITPMGGFPHYGEVNNDYIMIKGCCMGPKKRVITLRKSLLVHTSRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTASKFGHGRFQTPADKAAFMGPLK 393
>gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium
dendrobatidis JAM81]
Length = 390
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/388 (71%), Positives = 334/388 (86%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHGSLGFLPRKRA RHRGK K+FP+DD KP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRARRHRGKCKSFPRDDAKKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAV++IE PP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVSVIEAPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY KKY D K I++QL++++KYC V+RV+ HTQI+K++ L KKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYTEADA-KPIESQLQRIQKYCQVVRVICHTQIQKVR-LGTKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSVA KV +A FEK + + ++F++DEMIDIIG+TKG G+EGVV RWGV +
Sbjct: 179 VMEIQLNGGSVADKVAWAKDHFEKTVELSSIFEQDEMIDIIGITKGHGFEGVVARWGVKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+RV F V RAGQ+GYHHRTEMNKK+Y++GKA + +SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSRVQFAVPRAGQDGYHHRTEMNKKVYRVGKAG-DKNSAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T KDITPMGGFPHYG++NED+L+IKG C G +KRVVTLR+SLL T R ALE++ L
Sbjct: 298 EFDLTTKDITPMGGFPHYGMINEDWLMIKGSCPGVRKRVVTLRKSLLVHTKRSALEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT+QEK+ +YG LK
Sbjct: 358 KFIDTSSKFGHGRFQTSQEKSSHYGVLK 385
>gi|393246426|gb|EJD53935.1| 60S ribosomal protein L3 [Auricularia delicata TFB-10046 SS5]
Length = 388
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/388 (70%), Positives = 334/388 (86%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FP+DDP KP LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPRDDPKKPVHLTAFMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HKKE EAVTI+ETPPLVVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTIVETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK +DG K + +LE+++KY TV+RVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKK-SAEDGGKSVSRELERIRKYATVVRVLAHTQIRKT-GLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK + I+AVF++DE+IDII VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKTVDINAVFEQDEVIDIIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++GK ++ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEINKKIYRIGKG-DDAANAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V D++++KG G KKR++TLR+SL+ TSR LE+++L
Sbjct: 298 EADVTKKAITPMGGFPHYGIVKNDFVMLKGSIPGTKKRIITLRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHG FQT QEK+ + G LK
Sbjct: 358 KFIDTSSKFGHGAFQTFQEKSAFLGTLK 385
>gi|444723833|gb|ELW64463.1| 60S ribosomal protein L3, partial [Tupaia chinensis]
Length = 402
Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 121 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 180 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392
>gi|356461025|ref|NP_001239088.1| 60S ribosomal protein L3 [Canis lupus familiaris]
Length = 403
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3 isoform 1 [Callithrix jacchus]
Length = 403
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V++K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus]
gi|132958|sp|P21531.3|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4
gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus]
gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus]
gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus]
Length = 403
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|449271919|gb|EMC82093.1| 60S ribosomal protein L3 [Columba livia]
Length = 409
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 329/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 8 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 67
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTIIETPP+V+VG+VGYVKTP GLRS T++A+H+++E +RRFYKN
Sbjct: 68 RPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVKTPHGLRSFKTIFAEHISDECKRRFYKN 127
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+HL
Sbjct: 128 WHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVMAHTQMRLLP-LRQKKSHL 186
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+KVD+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 187 MEIQVNGGTVAEKVDWAREKLEQQVPVSTVFAQDEMIDVIGVTKGKGYKGVTSRWHTKKL 246
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 247 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLIK 306
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 307 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 366
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 367 EKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLK 399
>gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14]
Length = 388
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/387 (70%), Positives = 323/387 (83%), Gaps = 5/387 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRKFE PRHG LGFLP+KR H+G+++ FP+DD +K LTAFL +KAGMTHI+R+V
Sbjct: 1 MGHRKFEAPRHGHLGFLPKKRTKHHQGRIRKFPRDDCNKAPHLTAFLAHKAGMTHIMREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSKLHKKE EAV+I+ETPP+V+VGVVGY++TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 NQPGSKLHKKEIVEAVSILETPPMVIVGVVGYLETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY KKY DI+ +L ++KKYC V+RVLAH Q +K+ L+ KKAH
Sbjct: 121 NWYKSKRKAFTKYAKKYANSS---DIERELNRIKKYCQVVRVLAHDQPKKLH-LRIKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSV KVDFA FEKQ+P+ AVF +DE+IDI G TKG G EGVVTRWGVTR
Sbjct: 177 IMEIQINGGSVPDKVDFAKSLFEKQVPVSAVFTQDELIDICGATKGHGIEGVVTRWGVTR 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RVS+TV RAGQ+GYHHRTE+NKKIY++G A+ ++ S T
Sbjct: 237 LPRKTHRGLRKVACIGAWHPSRVSYTVPRAGQHGYHHRTEINKKIYRIG-AAGDAKSCQT 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEK ITPMGGFPHYG++NED+L+IKG VG KKR +TLR+SLL T R ALEEIKL
Sbjct: 296 EQDLTEKSITPMGGFPHYGIINEDWLMIKGAVVGVKKRPITLRKSLLLHTKRAALEEIKL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRL 387
KFIDTSSKFGHGRFQT +EKAK+ G L
Sbjct: 356 KFIDTSSKFGHGRFQTAEEKAKWMGPL 382
>gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens]
Length = 403
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D +K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLPDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca]
gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca]
Length = 403
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 403
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|384497998|gb|EIE88489.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 387
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 321/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HKKE EAVT+IE P +V+VGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTVIEAPAMVIVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY +KY +G KD+ +LE++KKYC+V+RV+AHTQI K K L Q+KAH
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSV QKVDFA FEK++ + ++F++DEMIDII TKG G+EGV RWG +
Sbjct: 178 IMEIQLNGGSVEQKVDFAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++ + ++ S T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D TEK ITPMGGFPHYG VNED+++IKGCC G KKRV+TLR+SL T R ALE++ L
Sbjct: 297 EYDLTEKQITPMGGFPHYGEVNEDFVMIKGCCAGAKKRVITLRKSLTVHTKRSALEKVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT EK ++ G LK
Sbjct: 357 KFIDTSSKFGHGRFQTPAEKHQFMGTLK 384
>gi|395753420|ref|XP_002831202.2| PREDICTED: 60S ribosomal protein L3 [Pongo abelii]
Length = 418
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 17 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 76
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKN
Sbjct: 77 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 136
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 137 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 195
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 196 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 255
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 256 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 315
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 316 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 375
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 376 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 408
>gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis]
Length = 410
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DDPSKP LTAF+GYKAGMTH++R+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPEDDPSKPVHLTAFIGYKAGMTHVLREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTILETPPMVIVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ + GKK I+ L+K+ KYC V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDELGKKSIERDLKKIVKYCKVVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A EK IP++ VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIDDKVKWAREHLEKPIPVNNVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R+A
Sbjct: 300 KNNASTQYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT ++K+ + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPKDKSDFMGTLK 393
>gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa]
gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa]
Length = 386
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 324/391 (82%), Gaps = 14/391 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPSKPIHLTAFMGFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVT++ETPP+++VGVVGY+ TPRG R TVWA+HL+E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG K IQA L KMKKYC++IRV+AHTQ AH
Sbjct: 121 NWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVIAHTQ-----------AH 169
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ +KVD+AY FEKQ+P+D++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 170 IMEIQVNGGTIPEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 229
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHS 297
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++GK+ + +
Sbjct: 230 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRIGKSCLTEEGKKN 289
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
T++D TEK I PMGGFPHYG+VN+D++LI+GCC+G KKR +TLR+SL+ QT R+A E+
Sbjct: 290 GGTDYDITEKSINPMGGFPHYGLVNQDFILIRGCCMGSKKRPITLRKSLIAQTKRVAYEK 349
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSKFGHGRFQT EK + G+LK
Sbjct: 350 INLKWIDTSSKFGHGRFQTHAEKKAFMGKLK 380
>gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens]
Length = 430
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 29 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 88
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKN
Sbjct: 89 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 148
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 149 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 207
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 208 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 267
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 268 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 327
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 328 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 387
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 388 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 420
>gi|354494770|ref|XP_003509508.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
gi|344245574|gb|EGW01678.1| 60S ribosomal protein L3 [Cricetulus griseus]
Length = 403
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|403282966|ref|XP_003932901.1| PREDICTED: 60S ribosomal protein L3 [Saimiri boliviensis
boliviensis]
Length = 403
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGK+ ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKRQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V++K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 403
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GK+ + MKKYC VIRVLAHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula]
Length = 399
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 325/388 (83%), Gaps = 1/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSL FLPRKR RHRGKVK FPKDD +KPC LTAF+GYKAGMTHI+R++
Sbjct: 1 MSHRKFSAPRHGSLAFLPRKRCKRHRGKVKTFPKDDAAKPCHLTAFMGYKAGMTHILREM 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSK HK E EAVTIIETPP+++VGVVGY++TPRGLR + T++AQHLN+E RRRFYK
Sbjct: 61 NRPGSKSHKHEVVEAVTIIETPPIMIVGVVGYIETPRGLRPIKTIFAQHLNDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF+K + +++ + G+K IQA +K+KKYC VIRV+ HTQ++ + G++QKKAH
Sbjct: 121 NWSNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVQLLNGVRQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGS++ KVD+A EK IPI +F KDEMID+IGVTKGKG++GV +RW +
Sbjct: 181 IMEIQVNGGSISDKVDWAKEHMEKAIPIKDIFNKDEMIDVIGVTKGKGFKGVTSRWHCKK 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKKIY++G +++ +A T
Sbjct: 241 LPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIGD-KEDNANAAT 299
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD TEK ITP+GGFPHYG V D+L++KG VGPK+RV+T+R+SL+ +R EE+KL
Sbjct: 300 EFDPTEKRITPVGGFPHYGTVKNDFLMLKGAVVGPKRRVITMRKSLVVNVTRKNREEVKL 359
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT +EK+++ G+LK
Sbjct: 360 KFIDTSSKFGHGRFQTPKEKSQFMGKLK 387
>gi|348569536|ref|XP_003470554.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
Length = 403
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/394 (68%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLRS TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK + MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+QIP+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWAREKLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia]
Length = 412
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPYGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+VIR++AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V KV +A EK IPID+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVDDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY+LG+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTASKFGHGRFQTPADKAAFMGTLK 393
>gi|396472938|ref|XP_003839232.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans JN3]
Length = 392
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EAVTIIETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEAVTIIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I A+LE+MKKYCTVIRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITAELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV +A+G FEK I I ++F+ +EMID+I VTKGKGY GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVSYAHGLFEKPIEISSIFEANEMIDVIAVTKGKGYNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GK E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKGEDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D+LL+KG C G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKQITPMGGFVRYGEVKNDFLLLKGNCPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G +K
Sbjct: 358 KWIDTSSKFGHGAYQTAAEKRQYEGTMK 385
>gi|52741|emb|CAA68370.1| J1 protein [Mus musculus]
gi|226725|prf||1604248A J1 protein
Length = 403
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/394 (68%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+FTVARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFTVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus]
Length = 403
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/394 (67%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVG+VGYV+TPRGLRS TV+A+H+++E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK++ D+GKK ++ MKKYC VIR++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++++KVD+A E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQGYHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D + K I P+GGF HYG V D+L++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE I LKFIDT+SKFGHGRFQT EK + G LK
Sbjct: 360 LERIDLKFIDTTSKFGHGRFQTVDEKKAFMGPLK 393
>gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca]
Length = 403
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/393 (67%), Positives = 329/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 122 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 180
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIK 300
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 361 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/387 (70%), Positives = 317/387 (81%), Gaps = 10/387 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLH+KE EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF+KY +KD A++++ KKYC V+R + HTQ+ K+K L QKKAH
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVK-LTQKKAH 171
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++E+QVNGGSV+ KVDF FEK++PI +VF KDEM+DIIGVTKG G V TRWGVTR
Sbjct: 172 IVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTR 231
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES-HSAM 299
L RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKKIY++GKA +E ++A
Sbjct: 232 LARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALREDPNNAA 291
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
D T+K ITPMGGFPHYG VNED++++KG GPKKRV+TLR+SLL QTSR ALE+I
Sbjct: 292 GSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGPKKRVITLRKSLLPQTSRNALEKID 351
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGR 386
LKFIDTSSK+GHGRFQT EK KYYGR
Sbjct: 352 LKFIDTSSKYGHGRFQTADEKRKYYGR 378
>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS) [Ostreococcus tauri]
gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS), partial [Ostreococcus tauri]
Length = 421
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/377 (72%), Positives = 325/377 (86%), Gaps = 4/377 (1%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR+G+LGFLP+KR+ R RGKVK+FPKDD SKP LTAF+G+KAGMTH+VRDVEKPGSK+H
Sbjct: 44 PRYGNLGFLPKKRSQRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHVVRDVEKPGSKMH 103
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KKE C+AVTIIE P LVVVG+VGYV+TP+GLR TVWA+HLN+E+RRRFYKNW KSKKK
Sbjct: 104 KKEQCDAVTIIECPELVVVGLVGYVRTPKGLRGKKTVWAEHLNDEIRRRFYKNWFKSKKK 163
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AFTKY K Y +KD LE++KK C VIRV+AHTQ+RK+KGLKQKKAH+MEIQVNG
Sbjct: 164 AFTKYAKNYTNGSIEKD----LEELKKSCDVIRVIAHTQVRKVKGLKQKKAHIMEIQVNG 219
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G A KVDF + FEK +P+D+VFQ+DEMID+IGVTKGKG++GVVTRWGVT+LPRKTHRG
Sbjct: 220 GDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTKLPRKTHRG 279
Query: 249 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
LRKV CIGAWHP+RVS+TVARAGQ GYHHRTE+NKK+YK+GKA + A T+FD TEK+
Sbjct: 280 LRKVGCIGAWHPSRVSYTVARAGQMGYHHRTELNKKVYKIGKAGTANFGANTDFDPTEKE 339
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 368
ITPMGGF HYG+V DY++IKG VGP+KR++T+RQSL KQT R+A E+I +KFIDTSSK
Sbjct: 340 ITPMGGFGHYGIVKSDYVMIKGGVVGPRKRLITMRQSLFKQTRRVATEKINIKFIDTSSK 399
Query: 369 FGHGRFQTTQEKAKYYG 385
FGHGRFQT +EKAK +G
Sbjct: 400 FGHGRFQTYEEKAKVFG 416
>gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/387 (70%), Positives = 317/387 (81%), Gaps = 10/387 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLH+KE EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF+KY +KD A++++ KKYC V+R + HTQ+ K+K L QKKAH
Sbjct: 121 NWYHSKKKAFSKYQ--------EKDHDAEVQRCKKYCQVVRAIMHTQVSKVK-LTQKKAH 171
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++E+QVNGGSV+ KVDF FEK++PI +VF KDEM+DIIGVTKG G V TRWGVTR
Sbjct: 172 IVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSVTTRWGVTR 231
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES-HSAM 299
L RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKKIY++GKA +E ++A
Sbjct: 232 LARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKKIYRIGKALREDPNNAA 291
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
D T+K ITPMGGFPHYG VNED++++KG GPKKRV+TLR+SLL QTSR ALE+I
Sbjct: 292 GSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGPKKRVITLRKSLLPQTSRNALEKID 351
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGR 386
LKFIDTSSK+GHGRFQT EK KYYGR
Sbjct: 352 LKFIDTSSKYGHGRFQTADEKRKYYGR 378
>gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus]
Length = 403
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGAKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|346227212|ref|NP_001230992.1| ribosomal protein L3 [Sus scrofa]
Length = 403
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|392568120|gb|EIW61294.1| 60S ribosomal protein L3 [Trametes versicolor FP-101664 SS1]
Length = 388
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/389 (69%), Positives = 332/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT++ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK GL QK+AH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKT-GLTQKRAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA G FEK + + +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFANGLFEKPVEVSSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G ++ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGEDDA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+TLR+SL+ TSR LE+++L
Sbjct: 298 EHDVTKKAITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITLRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKAAFLGTLKA 386
>gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens]
Length = 429
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 330/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V+
Sbjct: 28 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVD 87
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKN
Sbjct: 88 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 147
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 148 WHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 206
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 207 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 266
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 267 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 326
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 327 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 386
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 387 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 419
>gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus]
gi|341942150|sp|P27659.3|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein
gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus]
gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus]
gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus]
gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus]
gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus]
gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus]
gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus]
gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus]
gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus]
gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus]
gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus]
gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus]
gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus]
gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus]
gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus]
gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus]
gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus]
gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus]
gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus]
gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus]
gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus]
gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus]
gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus]
gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus]
gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus]
Length = 403
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus]
Length = 403
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ + MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFKSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|332858660|ref|XP_001150138.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Pan
troglodytes]
Length = 395
Score = 562 bits (1449), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VI V+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAKKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT + A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKQRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus]
Length = 403
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LEEI LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEEIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|149743311|ref|XP_001501957.1| PREDICTED: 60S ribosomal protein L3 [Equus caballus]
Length = 403
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DG+K ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGRKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE++ LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKVDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|367054940|ref|XP_003657848.1| 60S ribosomal protein L3 [Thielavia terrestris NRRL 8126]
gi|347005114|gb|AEO71512.1| hypothetical protein THITE_2123969 [Thielavia terrestris NRRL 8126]
Length = 392
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEIVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KVDF YG FEK + ID +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVDFGYGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG VN DY+++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EVDVTKKKITPMGGFVRYGEVNNDYVMVKGSVPGVKKRVMTLRKSMFTHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|343424921|emb|CBQ68459.1| probable RPL3-60s ribosomal protein l3 [Sporisorium reilianum SRZ2]
Length = 391
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE EAVT+IETPP+V VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +G I +LE++KKYCTV+RVLAHTQ+RK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSESNG-ASISRELERIKKYCTVVRVLAHTQVRKT-GLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGSVA+KVDFA FEK + +VF+++E+ID+I VTKG GYEGV RWG +
Sbjct: 179 LMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHGYEGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++ ++ S T
Sbjct: 239 LPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK ITP+GGFPHYG+V D+++IKG C G KKRV+TLR+SL TSR ALE + L
Sbjct: 298 DFDTTEKTITPLGGFPHYGLVKNDFVMIKGSCPGVKKRVLTLRKSLQVHTSRRALENVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+I TSS G G FQT EK + G+ K
Sbjct: 358 KWISTSSTMGKGNFQTPAEKDAFLGQRK 385
>gi|440798172|gb|ELR19240.1| ribosomal protein L3, putative [Acanthamoeba castellanii str. Neff]
Length = 398
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/391 (67%), Positives = 316/391 (80%), Gaps = 8/391 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF PRKRA+RHRGK K FPKDD SK LTAFL YKAGMTH+VRD+
Sbjct: 1 MSHRKFSAPRHGSLGFTPRKRAARHRGKCKTFPKDDASKKPHLTAFLAYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGS++HK+E EAVTI+E PP+VVVG+VGY+ TP G+R+L TVWAQHL+ E RRFYK
Sbjct: 61 DKPGSRMHKREVVEAVTILEAPPMVVVGIVGYIDTPSGMRTLTTVWAQHLSAECLRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY K + + ++ ++KKYCTV+RV+AHTQ+RK+ +QKKAH
Sbjct: 121 NWYRSKKKAFTKYQKALAANKARV-FDREVARLKKYCTVVRVIAHTQVRKL-NQRQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGS+A KVDFA EK +P+D VF E++D IGVTKGKGYEGV TRWGVTR
Sbjct: 179 IMEIQVNGGSIADKVDFAVSLLEKPVPVDNVFGDSELVDTIGVTKGKGYEGVTTRWGVTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRTE+NKKIY++GK ++
Sbjct: 239 LPRKTHRGLRKVACIGAWHPAAVQWSVPRAGQNGYHHRTELNKKIYRIGKGVRQEGGKIV 298
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TEFD TEK ITPMGGFPHYG VNEDYL+IKG +GPKKRV+T+R++LL+ T R
Sbjct: 299 HNNASTEFDLTEKSITPMGGFPHYGEVNEDYLMIKGAVIGPKKRVITIRKALLRPTKRWQ 358
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE+I KFIDTSSKFGHGRFQT +EK K+ G
Sbjct: 359 LEKIAPKFIDTSSKFGHGRFQTKEEKEKFMG 389
>gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori]
gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori]
Length = 413
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHKKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKR++TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 393
>gi|449549702|gb|EMD40667.1| hypothetical protein CERSUDRAFT_80320 [Ceriporiopsis subvermispora
B]
Length = 388
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/388 (70%), Positives = 331/388 (85%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAVMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK + +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPAEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G S E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGSGSDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V D+L++KG G KKRV+TLR+SL+ TSR LE+++L
Sbjct: 298 EHDITKKAITPMGGFPHYGIVKNDFLMLKGSVPGTKKRVITLRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KFIDTSSKFGHGAFQTAEEKNAFLGTLK 385
>gi|401409462|ref|XP_003884179.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
Length = 398
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/389 (68%), Positives = 322/389 (82%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR++
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EAVT+++TPP+V VGVVGY++TPRGLR+L TVWA HL++E +RRFYK
Sbjct: 61 DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY K+Y ++ ++A+L +MK YC+VIR + HTQ K + KKAH
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTP-IGSKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGSVA+KVDF FE +P+ AVF + EM+D+IGVTKG G +GVV+RWGVTR
Sbjct: 177 VMEIQVNGGSVAEKVDFCTKMFETAVPVKAVFTEGEMLDVIGVTKGHGVKGVVSRWGVTR 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G + + +A T
Sbjct: 237 LPRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATT 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEK ITPMGGFPHYG VN D+LLIKGC VG KKR +T R++L+ +TSR ALE + L
Sbjct: 296 ESDLTEKRITPMGGFPHYGTVNNDFLLIKGCIVGCKKRPITFRKTLVTRTSRKALEPVNL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTS+K+GHGRFQT++EKAK+YG LK+
Sbjct: 356 KFIDTSAKWGHGRFQTSEEKAKFYGPLKS 384
>gi|389744357|gb|EIM85540.1| 60S ribosomal protein L3 [Stereum hirsutum FP-91666 SS1]
Length = 388
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/389 (69%), Positives = 332/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT++ETPPL+VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPLIVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ D+G K I +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHAEDNG-KSITRELERIRKYCTVVRVLAHTQIRKT-GLAQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV KV+FA+G FEK + + +VF++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVTDKVEFAHGLFEKPVEVGSVFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGLGTDDG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+TLR+SL+ TSR LE+++L
Sbjct: 298 ESDITKKTITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITLRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKAAFLGTLKA 386
>gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus]
Length = 403
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGM HIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMIHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 403
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRF K
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFCK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LVEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|344296357|ref|XP_003419875.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
Length = 566
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 328/393 (83%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 165 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDTSKPVHLTAFLGYKAGMTHIVREVD 224
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKN
Sbjct: 225 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 284
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ DDGKK ++ MK+YC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 285 WHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKRYCQVIRVIAHTQMRLLP-LRQKKAHL 343
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+KVD+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 344 MEIQVNGGTVAEKVDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 403
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 404 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKVGQGYLIKDGKLIK 463
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 464 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 523
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 524 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 556
>gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC
18188]
Length = 392
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKNHSENSG-ASISRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGSVA KVDFA+G FEK I ID+VF+KDEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY++IKG G KKRV+TLR++L Q SR ALE+++L
Sbjct: 298 EFDVSKKQITPMGGFVRYGEVKNDYVMIKGSVPGVKKRVLTLRKTLYPQVSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT EK + G LK
Sbjct: 358 KWIDTSSKFGHGVFQTPAEKRAFMGTLK 385
>gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus]
gi|730564|sp|P39872.2|RL3_BOVIN RecName: Full=60S ribosomal protein L3
gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus]
gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus]
gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus]
gi|296486985|tpg|DAA29098.1| TPA: 60S ribosomal protein L3 [Bos taurus]
gi|1092507|prf||2024221A ribosomal protein L3
Length = 403
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda]
Length = 413
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRTHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 393
>gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus]
Length = 403
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTK KGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKDKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus]
gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus]
Length = 403
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+ KFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTYKFGHGRFQTMEEKKAFMGPLK 393
>gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1]
gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG]
Length = 389
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/389 (68%), Positives = 322/389 (82%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR++
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHVVREL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EAVT+++TPP+V VGVVGY++TPRGLR+L TVWA HL++E +RRFYK
Sbjct: 61 DKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALVTVWAGHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+KAFTKY K+Y ++ ++A+L +MK YC+VIR + HTQ K + KKAH
Sbjct: 121 NWYKSKRKAFTKYAKRYGDNN---KMEAELTRMKNYCSVIRAICHTQPSKTP-IGSKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGS+A+KVDF FE +P+ AVF + EMID+IGVTKG G +GVV+RWGVTR
Sbjct: 177 VMEIQVNGGSIAEKVDFCTKMFETAVPVKAVFTEGEMIDVIGVTKGHGVKGVVSRWGVTR 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRK+ACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G + + +A T
Sbjct: 237 LPRKTHRGLRKIACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRVGNGA-DPRNATT 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEK ITPMGGFPHYG VN D+LL+KGC VG KKR +T R++L+ +T+R ALE + L
Sbjct: 296 ESDLTEKRITPMGGFPHYGTVNNDFLLLKGCIVGCKKRPITFRKTLVPRTTRRALEPVNL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTS+K+GHGRFQT++EKAK+YG LK+
Sbjct: 356 KFIDTSAKWGHGRFQTSEEKAKFYGPLKS 384
>gi|346972435|gb|EGY15887.1| 60S ribosomal protein L3 [Verticillium dahliae VdLs.17]
Length = 391
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAV+II+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EVRRRFY+
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMVVVGIVGYIETPRGLRSLTTVWAEHLSDEVRRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I ++E++KKYC+V+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDF YG FEK++ +D +F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFGYGLFEKEVSVDTIFEQDEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++ KA E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG +N D++++KG GPKKRVVTLR+S+ TSR A E+I L
Sbjct: 298 ELDVTKKVITPLGGFVRYGEINNDFVMVKGSIPGPKKRVVTLRKSMFVHTSRRANEKITL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 402
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/391 (67%), Positives = 326/391 (83%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+VG+VGY+ TPRG R TVWA+HL+E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IRV+AHTQ++ MK ++KKAH
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMKH-REKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V +KVD+A EKQ+ +D+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHS 297
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+ + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TE+D TEK I PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E+
Sbjct: 300 GGTEYDITEKSINPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQT EK + G+LK
Sbjct: 360 INLKWIDTSSKLGHGRFQTHAEKRAFMGKLK 390
>gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 403
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R+LAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRILAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS+A KVD+A E+ +PI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSIADKVDWAREKLEQAVPIANVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGFHTKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL Q+SR A
Sbjct: 300 KNNASTEYDLSNKSINPLGGFVHYGEVTNDFVMLKGCVIGTKKRVLTLRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLK 393
>gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143]
gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88]
Length = 439
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 48 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 107
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 108 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 167
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 168 NWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 225
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG G+ GV +RWG +
Sbjct: 226 LMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKGHGFNGVTSRWGTKK 285
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GK S E +A T
Sbjct: 286 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NAST 344
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY++IKG G KKRV+TLR++L Q SR ALE+++L
Sbjct: 345 EFDVSKKQITPMGGFVRYGEVRNDYVMIKGSVPGVKKRVLTLRKTLYPQVSRRALEKVEL 404
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT EK + G LK
Sbjct: 405 KWIDTSSKFGHGAFQTPAEKRAFTGTLK 432
>gi|426225796|ref|XP_004007048.1| PREDICTED: 60S ribosomal protein L3 [Ovis aries]
Length = 403
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDVDGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18]
Length = 392
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGS+A KVDFA+G FEK I ID+VF++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSIADKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L Q SR ALE+++L
Sbjct: 298 EFDVSKKQITPMGGFVRYGEVKNDYVMLKGSVPGVKKRVLTLRKTLYPQVSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPAEKRAFMGTLK 385
>gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
Length = 391
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAV+II+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EVRRRFY+
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMVVVGLVGYIETPRGLRSLATVWAEHLSDEVRRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I ++E++KKYC+V+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITREIERIKKYCSVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDF YG FEK++ +D++F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFGYGLFEKEVSVDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++ KA E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIAKAGAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG +N D++++KG GPKKRVVTLR+S+ TSR + E+I L
Sbjct: 298 ELDVTKKVITPLGGFVRYGEINNDFVMVKGSIPGPKKRVVTLRKSMFVHTSRRSNEKITL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|432867474|ref|XP_004071207.1| PREDICTED: 60S ribosomal protein L3-like [Oryzias latipes]
Length = 403
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGK K+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKCKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGV GYV TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVTGYVSTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRV+AHTQ+R + LKQKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LKQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGG+++ KVD+A E+ +P++ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQAVPVNTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTEYDLSNKSINPLGGFVHYGQVANDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTIEEKKAFMGPLK 393
>gi|342356437|gb|AEL28877.1| ribosomal protein L3 [Heliconius melpomene cythera]
Length = 412
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGNIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 393
>gi|119190755|ref|XP_001245984.1| 60S ribosomal protein L3 [Coccidioides immitis RS]
gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3 [Coccidioides posadasii C735 delta SOWgp]
gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
gi|392868822|gb|EAS34621.2| 60S ribosomal protein L3 [Coccidioides immitis RS]
Length = 392
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 323/388 (83%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTIIETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K Y + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKSYSENKG-ASVTRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV +KVDFA+G FEK I ID+VF++DEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVPEKVDFAHGLFEKPIEIDSVFEQDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V D++++KG C G KKRV+TLR++L Q SR ALE+++L
Sbjct: 298 DFDVSKKQITPMGGFVRYGEVKNDFIILKGSCPGVKKRVLTLRKTLFPQVSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK + G LK
Sbjct: 358 KWIDTSSKFGHGAYQTAAEKRAFMGTLK 385
>gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus]
Length = 406
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 322/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP LT FLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPVHLTTFLGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTIIETPP+V+VGVVGY++TP GL++L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K+KK+AFTK +KK++ G+K I +L K+ KYC V+RV+AHTQ++ +K +QKK+H
Sbjct: 121 NWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAHTQMKLLK-FRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V +KV +A FEK +P+ VF +DEMID I VTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+++IKGCCVGPKKRV+TLR+SLL T R +
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCVGPKKRVITLRKSLLVHTKRSS 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTVADKAAFMGPLK 393
>gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR]
Length = 552
Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT VRD+
Sbjct: 161 MSHRKFEAPRHGSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTTVRDL 220
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 221 ERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 280
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 281 NWYKSKKKAFTKYAKNHSENKG-ASVARELERIKKYCTVVRLLAHTQIRKTP-LKQKKAH 338
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG G+ GV +RWG +
Sbjct: 339 LMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKGHGFNGVTSRWGTKK 398
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GK S E + A T
Sbjct: 399 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEGN-AST 457
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY++IKG G KKRV+TLR++L Q SR ALE+++L
Sbjct: 458 EFDVSKKQITPMGGFVRYGEVKNDYVMIKGSVPGVKKRVLTLRKTLYPQVSRRALEKVEL 517
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT EK + G LK
Sbjct: 518 KWIDTSSKFGHGAFQTPAEKRAFMGTLK 545
>gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
Length = 388
Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/389 (69%), Positives = 333/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDAQKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAV+IIETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVSIIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIGRELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+FA+G FEK + + VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFAHGLFEKPVEVSTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + +++ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDTGNAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+T+R+SL+ TSR LE+++L
Sbjct: 298 EHDITKKVITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGAFQTFEEKAAFLGTLKA 386
>gi|75076108|sp|Q4R5Q0.3|RL3_MACFA RecName: Full=60S ribosomal protein L3
gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis]
Length = 403
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE AVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|392878726|gb|AFM88195.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+K+D+A E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K I P+GGFPHYG V D+L++KGC VG KKRV+ LR+SLL Q+SR A
Sbjct: 300 KNNASTEYDLTDKSINPLGGFPHYGEVTNDFLMLKGCVVGTKKRVLALRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTSSKFGHGRFQTIEEKKAFMGPLK 393
>gi|119481241|ref|XP_001260649.1| 60S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
Length = 392
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/388 (69%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 298 EFDISKKQITPMGGFVRYGEVKNDYVMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|1350745|sp|P49149.2|RL3_TOXCA RecName: Full=60S ribosomal protein L3
gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis]
Length = 402
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 325/391 (83%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+ +KAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI E PP+V+VG+VGY+ TPRG R TVWA+HL+E+ R RFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRGRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG+K I+A L KMKKYC+ IRV+AHTQ++ MK ++KKAH
Sbjct: 121 NWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVIAHTQMKVMKH-REKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KVD+A EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHS 297
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+ + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKKN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
T++D TEK + PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E+
Sbjct: 300 GGTDYDITEKSVNPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSKFGHGRFQT EK + G+LK
Sbjct: 360 INLKWIDTSSKFGHGRFQTHAEKRAFMGKLK 390
>gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|83305621|sp|Q8NKF4.2|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23
gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163]
Length = 392
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/388 (69%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 298 DFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|392875086|gb|AFM86375.1| 60S ribosomal protein L3 [Callorhinchus milii]
gi|392876078|gb|AFM86871.1| 60S ribosomal protein L3 [Callorhinchus milii]
gi|392881180|gb|AFM89422.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+K+D+A E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K I P+GGFPHYG V D+L++KGC VG KKRV+ LR+SLL Q+SR A
Sbjct: 300 KNNASTEYDLTDKSINPLGGFPHYGEVTNDFLMMKGCVVGTKKRVLALRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTSSKFGHGRFQTIEEKKAFMGPLK 393
>gi|388855824|emb|CCF50608.1| probable RPL3-60s ribosomal protein l3 [Ustilago hordei]
Length = 391
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTA +GYKAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAMIGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE EAVT++ETPP+V VGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKKEIVEAVTVVETPPMVAVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY KK+ ++G I +LE++KKYCTV+R+LAHTQ+RK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-ASISRELERIKKYCTVVRLLAHTQVRKT-GLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGSVA KVDFA FEK + +VF+++E++D+I VTKG GYEGV RWG +
Sbjct: 179 LMEVQINGGSVADKVDFAKEHFEKTFDVKSVFEQNEIVDVIAVTKGHGYEGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++ ++ S T
Sbjct: 239 LPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRIANGDDKT-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK+ITP+GGFPHYG V D+++IKG C G KKRV+TLR+SL TSR ALE + L
Sbjct: 298 DFDTTEKNITPLGGFPHYGQVKNDFVMIKGSCPGVKKRVLTLRKSLQVHTSRRALETVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+I TSS G G FQT EK + G+ K
Sbjct: 358 KWISTSSTMGKGVFQTPAEKDAFLGQRK 385
>gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis]
gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/396 (68%), Positives = 322/396 (81%), Gaps = 8/396 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FPKDD + P LTAF+G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKL+KKE EAVTIIETPP++VVGVVGY++TPRG+R L T+WA+HL+EE +RRFYK
Sbjct: 61 EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWC SKKKAFTK +K++ DDGKK I+ MKKYC VIRV+ HTQ + +K ++QKKAH
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQQKLLK-MRQKKAH 179
Query: 181 LMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+MEIQVNGG VA+KVD+ E P+ VF DEMID+IGVTKG G++GV RWG
Sbjct: 180 IMEIQVNGGKDVAEKVDWCRERLENPAPVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTK 239
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE----- 294
+LPRKTH+GLRKVACIGAWHPARVSF+VARAGQ GYHHRTE+NKKIY++G+ +
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPARVSFSVARAGQAGYHHRTELNKKIYRIGQGIHKKDGKV 299
Query: 295 -SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
++A TE+D T+K ITPMGGFPHYG VNED+L++KGC VGPKKRV+TLR+SLL TSR
Sbjct: 300 IKNNASTEYDLTDKSITPMGGFPHYGQVNEDFLMVKGCVVGPKKRVLTLRKSLLVHTSRD 359
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
A E+I LKFIDTSSKFGHGRFQ EK + G LK+
Sbjct: 360 AAEKITLKFIDTSSKFGHGRFQHPAEKRAFMGMLKS 395
>gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus]
Length = 403
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIV +V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVMEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|387914664|gb|AFK10941.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+K+D+A E+Q+ ++ VF +DEM+D+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMVDVIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K I P+GGFPHYG V D+L++KGC VG KKRV+ LR+SLL Q+SR A
Sbjct: 300 KNNASTEYDLTDKSINPLGGFPHYGEVTNDFLMMKGCVVGTKKRVLALRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTSSKFGHGRFQTIEEKKAFMGPLK 393
>gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta]
Length = 414
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDASKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+V+R++AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRIIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ KV +A EK IPID+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +KA + G LK
Sbjct: 360 LEKISLKFIDTASKFGHGRFQTPADKAAFMGTLK 393
>gi|358055153|dbj|GAA98922.1| hypothetical protein E5Q_05610 [Mixia osmundae IAM 14324]
Length = 387
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 276/388 (71%), Positives = 327/388 (84%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDDP KP LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDPKKPVHLTAFMGYKAGMTHIVREL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HKKE EAVTIIETPP+ VVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTIIETPPVNVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY KK+ +G + ++E++KKYCTV+RVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHA--EGGASVSREMERIKKYCTVVRVLAHTQIRKT-GLKQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KVDFA FEK I + AVF++D+ IDIIGVTKGKG+EGV RWG +
Sbjct: 178 LMEIQINGGSIADKVDFAKSHFEKPIEVSAVFEQDQNIDIIGVTKGKGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE NKKIY++G + + +A T
Sbjct: 238 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTEKNKKIYRIGSGADDK-NAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D T K ITPMGGF YGVV D++LIKG CVG KKR++TLRQSL +SR LE+++L
Sbjct: 297 EYDTTSKAITPMGGFVRYGVVKNDFVLIKGSCVGVKKRILTLRQSLQIHSSRKDLEKVQL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K IDTSSKFGHGRFQT EK + G+ K
Sbjct: 357 KMIDTSSKFGHGRFQTAVEKNAFLGQRK 384
>gi|359745329|gb|AEV57601.1| 60S ribosomal protein L3 [Muraenesox cinereus]
Length = 403
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FP+DD +KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPRDDATKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFAAMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS+A KVD+A E+ +PI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSIADKVDWAREKLEQAVPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K ITP+GGF HYG V D++++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNAATEYDLSNKSITPLGGFVHYGEVRNDFVMLKGCIVGVKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKINLKFIDTTSKFGHGRFQTVEEKKGFMGPLK 393
>gi|348510237|ref|XP_003442652.1| PREDICTED: 60S ribosomal protein L3 [Oreochromis niloticus]
Length = 403
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV TPRGLRS TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVNTPRGLRSFKTVFAEHMSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRV+ HTQ+R M L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFAAMKKYCQVIRVICHTQMR-MLPLRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGG+++ KVD+A E+ + ++ VF +DEMIDIIGVTKG GY+GV +RW +
Sbjct: 180 LMEVQVNGGTISDKVDWAREKLEQAVLVNNVFTQDEMIDIIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ +
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHQKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K I PMGGF HYG V D++++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTEYDLSNKSINPMGGFVHYGEVRNDFVMLKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 QEKIDLKFIDTTSKFGHGRFQTVEEKKVFMGPLK 393
>gi|409079895|gb|EKM80256.1| hypothetical protein AGABI1DRAFT_84723 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198339|gb|EKV48265.1| hypothetical protein AGABI2DRAFT_135382 [Agaricus bisporus var.
bisporus H97]
Length = 388
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/389 (68%), Positives = 333/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKR++RHRGKVK+FPKDDP KP LTA++GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSARHRGKVKSFPKDDPKKPVHLTAYMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 ERPGSKMHKREIVEAVTIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK L QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIGRELERIRKYCTVVRVLAHTQIRKTP-LSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK + I +F++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPVEISTIFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKI+++G + ++ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIFRVGSGADDA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V D+LL+KG G KKRV+T+R+SL+ TSR LE+I+L
Sbjct: 298 EADATKKSITPMGGFPHYGIVKNDFLLLKGSIPGIKKRVITIRKSLMVHTSRRDLEKIQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGSFQTFEEKAAFLGTLKA 386
>gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex]
Length = 412
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 260/391 (66%), Positives = 323/391 (82%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR HRG+VK+FP DDP KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D GKK I+ +L MK+YC VIRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ QKVD+A EK IPI ++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 MMEIQVNGGTIRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTEMNKKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTEMNKKIYRIGKGIHTRKGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR++L+ R+A
Sbjct: 300 KNNAATEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKALVTSAKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE+I+LKFIDTSSKFGHGRFQT +KA + G
Sbjct: 360 LEKIELKFIDTSSKFGHGRFQTPADKASFMG 390
>gi|452001707|gb|EMD94166.1| hypothetical protein COCHEDRAFT_1130499 [Cochliobolus
heterostrophus C5]
Length = 392
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G + I +LE++KKYCTV+RVLAHTQI K L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTP-LQQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+F +G FEK I I +VF+ +EMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N KIY++GK E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+L+KG C G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDVSKKRITPMGGFVRYGEVKNDYILLKGACPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQYEGVLK 385
>gi|337580|gb|AAA60291.1| ribosomal protein L3, partial [Homo sapiens]
Length = 398
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/389 (67%), Positives = 326/389 (83%), Gaps = 7/389 (1%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
F PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGS
Sbjct: 1 FSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 60
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
K++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KS
Sbjct: 61 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKS 120
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQ
Sbjct: 121 KKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQ 179
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
VNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 180 VNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 239
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAM 299
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A
Sbjct: 240 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNAS 299
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I
Sbjct: 300 TDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKID 359
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LKFIDTTSKFGHGRFQTMEEKKAFMGPLK 388
>gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus]
gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus]
Length = 402
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 326/394 (82%), Gaps = 8/394 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKRA+ RGKVK+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRAAS-RGKVKSFPKDDPTKPVHLTAFLGYKAGMTHIVREV 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVG+VGYV+TPRGLRS TV+A+H+++E RRRFYK
Sbjct: 60 DRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFKTVFAEHISDECRRRFYK 119
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK++ D+GKK ++ MKKYC VIR++AHTQ+R + L+QKK+H
Sbjct: 120 NWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRIIAHTQMRLLP-LRQKKSH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG++++KVD+A E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 179 LMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVTKGHGYKGVTSRWHTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 239 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEVNKKIYKIGQGYHTKDGKVI 298
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D + K I P+GGF HYG V D+L++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 299 KNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRA 358
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE I LKFIDT+SKFGHGRFQT EK + G LK
Sbjct: 359 LERIDLKFIDTTSKFGHGRFQTVDEKKAFMGPLK 392
>gi|388583632|gb|EIM23933.1| 60S ribosomal protein L3 [Wallemia sebi CBS 633.66]
Length = 391
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/387 (66%), Positives = 320/387 (82%), Gaps = 5/387 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASR--HRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVR 58
MSHRK+E PRHGSLGFLPRKR + RGK K+FPKDD KP LT +GYKAGMTH+VR
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRCTNVGARGKCKSFPKDDAKKPVHLTGLIGYKAGMTHVVR 60
Query: 59 DVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
D+++PGSK+HK+E E VTI+ETPP+ VVGVVGYV+TPRGLRSL TVWA+HL++E++RRF
Sbjct: 61 DLDRPGSKMHKREVVEPVTIVETPPMAVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRF 120
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
YKNW +SKKKAFTKY KK+ + G I ++E++KKYC V+RVLAHTQ+ K LKQKK
Sbjct: 121 YKNWYRSKKKAFTKYAKKHSENSGA-SITREIERIKKYCQVVRVLAHTQVSKT-SLKQKK 178
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AHLMEIQVNGGSV+ KVDFA FEK + +VF++DE+ID IG+TKG+GYEGV RW V
Sbjct: 179 AHLMEIQVNGGSVSDKVDFAKSHFEKTVSASSVFEQDEVIDAIGITKGRGYEGVTKRWNV 238
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
TRLPRKTH+GLRKVACIGAWHP+ V F+VAR+GQ+G+HHRTE+NKK+Y++G A ++ ++A
Sbjct: 239 TRLPRKTHKGLRKVACIGAWHPSNVMFSVARSGQDGFHHRTELNKKVYRIGSA-EDKNNA 297
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TEFD TEK ITPMGGFPHYGV+ D++++KGC VGPKKR +TLR+S TSR LE++
Sbjct: 298 STEFDPTEKQITPMGGFPHYGVIQNDFIMLKGCIVGPKKRAITLRKSHQVHTSRAHLEKV 357
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LKFIDTSSK GHG+FQT+ EKA +YG
Sbjct: 358 NLKFIDTSSKIGHGKFQTSAEKAAFYG 384
>gi|392879502|gb|AFM88583.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCLVIRVLAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+K+D+A E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKVYRVGMGYHNKEGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K I P+GGFPHYG V D+L++KGC VG KKRV+ LR+SLL Q SR A
Sbjct: 300 KNNASTEYDLTDKSINPLGGFPHYGEVTNDFLMMKGCVVGTKKRVLALRKSLLVQFSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTSSKFGHGRFQTIEEKKAFMGPLK 393
>gi|451849886|gb|EMD63189.1| hypothetical protein COCSADRAFT_120340 [Cochliobolus sativus
ND90Pr]
Length = 392
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G + I +LE++KKYCTV+RVLAHTQI K L+QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-QSITRELERIKKYCTVVRVLAHTQISKTP-LQQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+F +G FEK I I +VF+ +EMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPIEITSVFEDNEMIDVIAVTKGKGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT +N KIY++GK E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSVNHKIYRIGKGDDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+L+KG C G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDVSKKRITPMGGFVRYGEVKNDYVLLKGACPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQYEGVLK 385
>gi|392881234|gb|AFM89449.1| 60S ribosomal protein L3 [Callorhinchus milii]
Length = 403
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRHRGKVKGFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT+IETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVIETPPMVIVGLVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRVLAHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEEGKKQLEKDFASMKKYCQVIRVLAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+K+D+A E+Q+ ++ VF +DEMID+IGVTKG G++GV +RW +
Sbjct: 180 IMEIQVNGGTIAEKIDWAREKLEQQVAVNTVFGQDEMIDVIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NK++Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKRVYRVGMGYHNKEGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K I P+GGFPHYG V D+L++KGC VG KKRV+ LR+SLL Q+SR A
Sbjct: 300 KNNASTEYDLTDKSINPLGGFPHYGEVTNDFLMMKGCVVGTKKRVLALRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTSSKFGHGRFQTIEEKKAFMGPLK 393
>gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus]
Length = 412
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ R RGKVKAFPKDDP+KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDPNKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VG VGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGAVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+VIRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 393
>gi|392593174|gb|EIW82500.1| hypothetical protein CONPUDRAFT_81978 [Coniophora puteana
RWD-64-598 SS2]
Length = 388
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/389 (69%), Positives = 331/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAV+I+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREIVEAVSIVETPPMMVVGVVGYVETPRGLRTLTTVWANHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K +LE+++KYCTV+RVL+HTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSTARELERIRKYCTVVRVLSHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA G FEK ++++F++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAQGLFEKPFDVNSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGTDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V D+L++KG G KKRVVTLR+SL TSR LE+++L
Sbjct: 298 ESDVTKKAITPMGGFPHYGIVKNDFLMLKGSIPGTKKRVVTLRKSLTVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGSFQTFEEKAAFLGTLKA 386
>gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
jacchus]
Length = 403
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 328/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLP+KR SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPQKRNSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V++K+D+A E+Q+P++ VF +DEMID+IGV+K KGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVSEKLDWARKRLEQQVPVNQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKWWA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88]
gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger]
Length = 392
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EA T+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQ+RK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ GYHHRT N K++++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF HYG V D++L+KG G KKRV+TLR++L QTSR A E+I+L
Sbjct: 298 DFDISKKQITPMGGFVHYGEVKNDFVLLKGSVPGVKKRVMTLRKTLYPQTSRRATEKIEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex]
Length = 416
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR HRG+VK+FP DDP KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRCRSHRGRVKSFPHDDPKKPIHLTAFLAYKAGMTHIVREC 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+VG+VGYV TP+GLR+L TVWA+H+ E+ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALKTVWAEHIGEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK++ D GKK I+ +L MK+YC VIRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVIAHTQMKLLR-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V QKVD+A EK IPI ++F +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 MMEIQVNGGTVRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVTKGKGFKGVTSRWHTRK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGKGIHTRKGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGF HYG VN D+++IKGCC+GPKKRV+TLR++L+ R+A
Sbjct: 300 KNNAATEYDLTDKSITPMGGFVHYGEVNNDFVMIKGCCMGPKKRVITLRKALVTSAKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I+LKFIDTSSKFGHGRFQT +KA++ G K
Sbjct: 360 LEKIELKFIDTSSKFGHGRFQTPADKAQFMGPTK 393
>gi|367035414|ref|XP_003666989.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
42464]
gi|347014262|gb|AEO61744.1| hypothetical protein MYCTH_2312253 [Myceliophthora thermophila ATCC
42464]
Length = 391
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+TPP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNGAA-ITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG+VA+KVDF +G FEK + ID +F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGTVAEKVDFGHGLFEKPVSIDTIFEKDEIIDVIAVTKGHGFTGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITPMGGF YG VN DY+++KG G KKRV+TLR+SL TSR ALE+++L
Sbjct: 298 DVDVTKKKITPMGGFVRYGEVNNDYVMVKGSVPGVKKRVMTLRKSLFVHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
Length = 392
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K++ + G + +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGAVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK + E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGTDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 298 EFDISKKQITPMGGFVRYGEVKNDYVMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|389611151|dbj|BAM19187.1| ribosomal protein L3 [Papilio polytes]
Length = 412
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ R RGKVKAFPKDD +KP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRSRGKVKAFPKDDQNKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+VIRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQVNGGTIEDKVKWAREHLEKPIPVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R A
Sbjct: 300 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 393
>gi|402854487|ref|XP_003891900.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 403
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/394 (67%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIMREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VI V+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVN G+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNRGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGL KVACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLHKVACIGAWHPAHVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|409049883|gb|EKM59360.1| hypothetical protein PHACADRAFT_205564 [Phanerochaete carnosa
HHB-10118-sp]
Length = 403
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/389 (68%), Positives = 331/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD+
Sbjct: 16 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDIKKPVHLTAVMGYKAGMTHVVRDL 75
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 76 DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 135
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK ++DG K + +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 136 NWYRSKKKAFTRYAKKV-SEDGGKSVTRELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 193
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK P+ +VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 194 LMEIQVNGGSIADKVEFAHGLFEKPFPVTSVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 253
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G + ++ +A T
Sbjct: 254 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIG-SGEDVANAST 312
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITPMGGFPHYG++ D+L++KG G KKR++T+R+SL+ TSR LE+++L
Sbjct: 313 ESDITNKQITPMGGFPHYGIIKNDFLILKGSIPGTKKRIITIRKSLMVHTSRRDLEKVQL 372
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EK + G LKA
Sbjct: 373 KFIDTSSKFGHGAFQTAEEKGAFLGTLKA 401
>gi|440903024|gb|ELR53738.1| 60S ribosomal protein L3, partial [Bos grunniens mutus]
Length = 402
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/393 (66%), Positives = 326/393 (82%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREVD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+V+VG+VGYV+TPRGLR+ T++A+H+++E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 121 WHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+QVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 180 MEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 PRKTHRGLRKVACIGAWHPAWVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIK 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 300 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392
>gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
gi|347828492|emb|CCD44189.1| similar to 60S ribosomal protein l3 [Botryotinia fuckeliana]
Length = 392
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 323/388 (83%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRASRHRGKVK+FPKDD +KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA+KVDFA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFASGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT N K+Y++G+ + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGRG-DDPNNAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKAITPMGGFVRYGEVKNDFIMLKGSVPGVKKRVMTLRKSMFVHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT +EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTAEEKHQFLGTLK 385
>gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremula]
Length = 414
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+ YKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFISYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKL+KKE EAVTI+E PP+VVVGVVGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKLNKKEIVEAVTILEAPPMVVVGVVGYIETPHGLRALATVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ +K+ KYC V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWSDDLGKKSIEKDFKKIIKYCKVVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+A KV +A FEK IP+ VF +DEMID IGVTKG GY+GV +RW +
Sbjct: 180 IMEIQLNGGSIADKVAWARAHFEKPIPVSEVFAQDEMIDCIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D +EK ITPMGGFPHYG VN D+++IKGCCVGPKKRV+TLR+SLL T R+A
Sbjct: 300 KNNAATDYDLSEKTITPMGGFPHYGEVNNDFVMIKGCCVGPKKRVITLRKSLLVHTKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTAADKAAFMGPLK 393
>gi|156065829|ref|XP_001598836.1| 60S ribosomal protein L3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 392
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRASRHRGKVK+FPKDD +KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRASRHRGKVKSFPKDDKTKPVHLTATLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA+KVDFA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFASGLFEKPVEIGSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ+GYHHRT N K+Y++G+ + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQDGYHHRTSCNHKVYRIGRG-DDPNNAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V DY+++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKAITPMGGFVRYGEVKNDYIMLKGSVPGVKKRVMTLRKSMFVHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAYQTAEEKHTFLGTLK 385
>gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus]
Length = 392
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPK DP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKYDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVTIIETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 298 DFDISKKQITPMGGFVRYGEVKNDYIMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|407929355|gb|EKG22187.1| Ribosomal protein L3 [Macrophomina phaseolina MS6]
Length = 392
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 324/388 (83%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++ +GVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K++ +++G K I +LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQH-SENGGKSITRELERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGSVA+KVDFA G FEK I + ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEVQVNGGSVAEKVDFAQGLFEKPIEVSSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK +++ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKG-EDAGNAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITP+GGF YG V D++L+KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKTITPLGGFVRYGEVKNDFVLLKGSVPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQYLGTLK 385
>gi|341038755|gb|EGS23747.1| 60S ribosomal protein L3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 392
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRG+VK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGRVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+ PP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDCPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYAENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV+F FEK + ID +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGRSLFEKPVTIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG VN DY++IKG G KKR++TLR+SL TSR ALE+++L
Sbjct: 298 ETDLTKKKITPMGGFVRYGEVNNDYVMIKGSVPGVKKRIMTLRKSLFTHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK ++ G LK
Sbjct: 358 KWIDTSSEFGHGAFQTAAEKKQFMGTLK 385
>gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 392
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ +G + I +LE+MKKYCTVIRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESNG-QSITRELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KV+ +G FEK I I ++F+ +EMID+I VTKG GY GV +RWG +
Sbjct: 179 LMEIQINGGSIADKVEHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GKA E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D++L+KG C G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKRITPMGGFVRYGEVKNDFVLLKGNCPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQYEGVLK 385
>gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum]
Length = 408
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 263/394 (66%), Positives = 320/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KRA RHRG+VK+FPKDDPSKP LTAF+ YKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRARRHRGRVKSFPKDDPSKPIHLTAFIAYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKL+KKE E VTI+E PP+++VGVVGYV+TP GL+ L TV+A+HL+E+ RRRFYK
Sbjct: 61 DRPGSKLNKKEIVEPVTILEAPPMIIVGVVGYVETPYGLKPLKTVFAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAF KY++K++ ++GK+ I L K+ KY VIRV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFVKYSRKWQDENGKRQIAKDLGKIAKYSKVIRVVAHTQMKLLKK-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+VA+KV +A FEK +P+ VF DEMID IGVTKG+GY+GV +RW +
Sbjct: 180 IMEIQVNGGTVAEKVQWAKEHFEKPVPVSHVFAPDEMIDCIGVTKGRGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGLGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITPMGGFPHYG VN D+L+IKGCCVGPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDLTEKTITPMGGFPHYGEVNNDFLMIKGCCVGPKKRVITLRKSLLVHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 360 LESINLKFIDTSSKFGHGRFQTVADKAAFMGPLK 393
>gi|410903147|ref|XP_003965055.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
Length = 403
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/394 (65%), Positives = 322/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP +TAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VV+GVVGYV TP GLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC VIRV+ HTQ+R + ++QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFNLMKKYCQVIRVITHTQMRLLP-IRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGG+++ KVD+A E+ IPI+ VF +DEMID+IG+TKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQSIPINTVFTQDEMIDVIGITKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH---- 296
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGFHTKDGKLV 299
Query: 297 --SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
+A T++D + K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KSNASTDYDLSNKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
Length = 399
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 258/393 (65%), Positives = 326/393 (82%), Gaps = 6/393 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGF PRKRASRH+GKVK+FPKDD ++ LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRASRHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSK+HKKE EAVTI+E PP+ +VG+VGY++T +GL++ TVWAQHL++ RRR YK
Sbjct: 61 EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYIETAQGLKTYKTVWAQHLSDNFRRRLYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KSK KKAFTKY K+YET++GKK I+A L+ +KK C+V+RV+AHTQI K++ L QKKA
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKAIEASLQAIKKRCSVVRVIAHTQINKLR-LTQKKA 179
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H++EIQVNGGS+ +KV+FA FEK + + VF ++EMID+IGVTKGKG+ GV+ RWGV
Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVSVSGVFSENEMIDVIGVTKGKGFNGVIKRWGVR 239
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS----QES 295
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A ++
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPVEGKQI 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
+ TEFD TEK I PMGGF HYGVV++D++++KGC GP+KR +TLR+++ QTSR AL
Sbjct: 300 STGKTEFDLTEKTINPMGGFTHYGVVDQDFIMVKGCVAGPRKRALTLRKTITPQTSRAAL 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+S FG+GRFQT+ EK+K+ G LK
Sbjct: 360 EKISLKFIDTTSSFGNGRFQTSSEKSKHMGVLK 392
>gi|336263974|ref|XP_003346766.1| 60S ribosomal protein L3 [Sordaria macrospora k-hell]
gi|380091473|emb|CCC10969.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 392
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNGAA-ITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KV+F +G FEK + ID++F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSIADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GKA E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKAGAED-SAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFIHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|330907574|ref|XP_003295853.1| 60S ribosomal protein L3 [Pyrenophora teres f. teres 0-1]
gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
Length = 392
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFY+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPMIAVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G + I +LE+MKKYCTVIRVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-QSITRELERMKKYCTVIRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KV +G FEK I I ++F+ +EMID+I VTKG GY GV +RWG +
Sbjct: 179 LMEIQINGGSIADKVAHGHGLFEKPIEISSIFEANEMIDVIAVTKGHGYNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++GKA E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQMGYHHRTSVNHKIYRIGKADDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D++L+KG C G KKRVVTLR+S+ TSR ALE+++L
Sbjct: 298 EFDVSKKRITPMGGFVRYGEVKNDFVLLKGNCPGVKKRVVTLRKSMFIHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK +Y G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQYEGVLK 385
>gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40]
gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|391868765|gb|EIT77974.1| 60S ribosomal protein [Aspergillus oryzae 3.042]
Length = 392
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPPLV +GVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAVTVIETPPLVAIGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K++ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHAEESG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDE+ID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKTIEIDSIFEKDEVIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K+Y++GK S E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVYRIGKGSDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V D++++KG G KKRV+TLR++L QTSR A E+I+L
Sbjct: 298 DFDISKKQITPMGGFVRYGEVKNDFVMVKGSVPGVKKRVMTLRKTLYPQTSRKATEKIEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K++DTSS+FGHG FQT +EK + G LK
Sbjct: 358 KWVDTSSEFGHGAFQTPEEKRAFLGTLK 385
>gi|452988462|gb|EME88217.1| hypothetical protein MYCFIDRAFT_209740 [Pseudocercospora fijiensis
CIRAD86]
Length = 392
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 323/388 (83%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDDP KP LTA +GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDPKKPVHLTAAMGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EAVT+IETPP++V+G+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMMVIGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G K+I LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEESG-KNITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+F +G FEK + ID++F++DEMID I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSIFEQDEMIDCIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDG-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDHSKKQITPMGGFVRYGEVKNDFVMLKGSVPGVKKRVMTLRKSMFVHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKKQFVGTLK 385
>gi|357017575|gb|AET50816.1| hypothetical protein [Eimeria tenella]
Length = 388
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/389 (68%), Positives = 321/389 (82%), Gaps = 7/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGF PRKR RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFCPRKRCRRHRGKVKAFPKDDPSKPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSKLHKKE EAVTI+E+PP+V VG+VGY++TP+GLR+L TVWA HL+EE RRRFYK
Sbjct: 61 ERPGSKLHKKEVVEAVTIVESPPMVCVGLVGYIETPQGLRALSTVWAGHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK-GLKQKKA 179
NW KSKKKAFT+Y+KKY ++ +QA+++ +K++C VIR + HTQ K GL +KA
Sbjct: 121 NWYKSKKKAFTRYSKKYAENN---KMQAEIDSIKQHCAVIRAICHTQPSKTPTGL--RKA 175
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+MEIQVNGG+VA KVDF FE +PI AVF++DEM+D+IGVTKG G +GVV+R+GVT
Sbjct: 176 HIMEIQVNGGTVADKVDFVTKMFESPVPISAVFEQDEMLDVIGVTKGHGVKGVVSRFGVT 235
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
RLPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTEMNKK+Y++G S + +
Sbjct: 236 RLPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTEMNKKVYRIGSGS-DPRNGS 294
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T+ D TEK ITPMGGFPHYG V D+++IKGC VG KKR +T+R++L+ +TSR ALE I
Sbjct: 295 TDADLTEKRITPMGGFPHYGEVRSDFIMIKGCIVGCKKRPITMRKTLVPRTSRRALENIH 354
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSK+GHGRFQT+ EKAK+YG LK
Sbjct: 355 LKFIDTSSKWGHGRFQTSDEKAKFYGPLK 383
>gi|71984538|ref|NP_001021254.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
gi|1710557|sp|P50880.1|RL3_CAEEL RecName: Full=60S ribosomal protein L3
gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|3875827|emb|CAA90183.1| Protein RPL-3, isoform a [Caenorhabditis elegans]
Length = 401
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 254/391 (64%), Positives = 324/391 (82%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+ GV GYV TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGG++ QKVD+A EKQ+ +D VF +DEMID IGVT+G G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHS 297
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD T+K ITPMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+
Sbjct: 300 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQTT EK + G+LK
Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
Length = 392
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMMVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV+F +G FEK + +D++F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSVDSIFEKDEMIDVIAVTKGHGFSGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK + SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-SAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG VN D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EIDVTKKKITPMGGFVRYGEVNNDFVMVKGSVPGVKKRVMTLRKSMFTHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei]
gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei]
Length = 401
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 255/391 (65%), Positives = 323/391 (82%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGG++ QKVD+A EKQI +D VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHS 297
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIYK+GK++ + ++
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYKIGKSALTEEGKNN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD T+K I PMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+
Sbjct: 300 GSTEFDLTQKTINPMGGFPRYGIVNQDYIMLRGAILGPKKRLITLRKSLITQTKRVAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQTT EK + G+LK
Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Azumapecten farreri]
Length = 396
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/393 (66%), Positives = 321/393 (81%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGS GFLP+KRASRHRGKVKAFP DD SKP LTAF+GYKAGM+HIVRDV+
Sbjct: 3 SHRKFSAPRHGSKGFLPKKRASRHRGKVKAFPTDDKSKPVHLTAFIGYKAGMSHIVRDVD 62
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK +KKE EAVTIIETPP+V+VG+VGY++TP GLRS T++A+HLNE+ RRRFYKN
Sbjct: 63 RPGSKSNKKEIVEAVTIIETPPMVIVGLVGYIETPNGLRSFKTIFAEHLNEDCRRRFYKN 122
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KKKAFTKY KK+ + GKK+I+ +KMKKYC VIRV+AHTQ + MK +QKKAH+
Sbjct: 123 WYNCKKKAFTKYAKKWTDESGKKEIERDFQKMKKYCKVIRVIAHTQTKLMKK-RQKKAHI 181
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG++AQKVD+A E +P+ +VF DE IDIIGVTKGKG +GV +RW +L
Sbjct: 182 MEIQVNGGTIAQKVDWAREKMESSVPVGSVFAMDENIDIIGVTKGKGVKGVTSRWHTKKL 241
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 295
PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+N+KIY++G+ +
Sbjct: 242 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINEKIYRMGEGTHTKDGKLVK 301
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T+FD +EK+ITPMGGFPHYG VN D+++IKGC +GPKKR++TLR+SLL + +
Sbjct: 302 NNASTDFDPSEKNITPMGGFPHYGEVNNDFIMIKGCTMGPKKRILTLRKSLLPSFKKKQM 361
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK+ + G LK
Sbjct: 362 EKINLKFIDTASKFGHGRFQTFEEKSNFMGPLK 394
>gi|428179797|gb|EKX48666.1| large subunit ribosomal protein L3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 401
Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/395 (69%), Positives = 330/395 (83%), Gaps = 10/395 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGF PRKR + HRG+V+ FP+DD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRHGSLGFCPRKRCAHHRGRVRKFPRDDASKPCHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK HKKE+ EAVTI+E PP+VVVG+VGYVKTPRGLRSL TVWA+HL++E RRR YK
Sbjct: 61 DKPGSKQHKKESVEAVTILEAPPIVVVGIVGYVKTPRGLRSLTTVWAKHLSDEFRRRMYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KSK KKAFTKYTK E + K+ ++E++KKYC V+RV+AHTQ+ K+ + QKKA
Sbjct: 121 NWYKSKSKKAFTKYTK--EESERSKNSDKEIERIKKYCQVVRVIAHTQLSKV-NIGQKKA 177
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+MEIQVNGG+ KVDFA FE+Q+P+ +VF ++EMID+IGVTKG GY+GVV+RW VT
Sbjct: 178 HVMEIQVNGGTTKDKVDFATKLFEQQVPVKSVFSQNEMIDVIGVTKGHGYKGVVSRWHVT 237
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------ 293
+LPRKTHRGLRKV C+G+WHP+ V ++VARAGQ GY HRTE+NKKIY++G+A++
Sbjct: 238 KLPRKTHRGLRKVGCVGSWHPSAVGWSVARAGQKGYFHRTELNKKIYRIGEAARKADGSI 297
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
E +A TEFD TEK ITPMGGFPHYG V ED+++IKGCC+G KKRV+T+R+SLL QTSR
Sbjct: 298 EHKNATTEFDLTEKSITPMGGFPHYGAVMEDFVMIKGCCMGTKKRVITMRKSLLAQTSRN 357
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
ALEEI LKFIDTSSKFGHGRFQT EK+K+ G LK
Sbjct: 358 ALEEISLKFIDTSSKFGHGRFQTADEKSKFMGLLK 392
>gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans]
gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31]
[Aspergillus nidulans FGSC A4]
Length = 392
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRG+VK+FPKDDP KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EA T+IETPPL+ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA+KVDFA FEK I ID +F+KDEMID+I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITP+GGF YG V D++L+KG G KKRV+TLR++L QTSR A E++ L
Sbjct: 298 DFDVSKKQITPLGGFVRYGEVKNDFILLKGSVPGVKKRVMTLRKTLYPQTSRRATEKVDL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTPEEKRAFMGTLK 385
>gi|340522512|gb|EGR52745.1| hypothetical protein TRIREDRAFT_73765 [Trichoderma reesei QM6a]
Length = 391
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ +D+ I +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGASINRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK + +D +F++DE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVADKVDFAKDLFEKPVSVDTIFEQDEVIDVIAVTKGHGFSGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITP+GGF YG VN D++++KG G KKRVVTLR+S+ TSR ALE+I L
Sbjct: 298 DVDVTKKKITPLGGFVRYGEVNNDFVMVKGSIPGTKKRVVTLRKSMWTHTSRKALEKINL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 392
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + G I +LE+++KYCTV+RVLAHTQIR+ +KQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKSHAESSG-ASITRELERIQKYCTVVRVLAHTQIRQTP-IKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA FEK I ID++F+KDEMID+I VTKG G+ GV +RWG T+
Sbjct: 179 LMEIQVNGGSVADKVDFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N K++++GK + E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKVFRIGKGTDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF HYG V D++++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 298 EFDISKKQITPMGGFVHYGEVKNDFVMVKGSIPGVKKRVMTLRKTLYPQTSRRATEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 358 KWIDTSSKFGHGAFQTFEEKKAFMGTLK 385
>gi|453089521|gb|EMF17561.1| 60S ribosomal protein L3 [Mycosphaerella populorum SO2202]
Length = 392
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP + C LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKCHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPIIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G K I LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEESG-KSITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+F +G FEK + ID+VF++DEMID I VTKG GY+GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGYQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGSDDG-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V D++L+KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDHSKKQITPMGGFVRYGEVKNDFVLLKGSVPGVKKRVMTLRKSMFIHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPSEKKQFIGTLK 385
>gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 389
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 321/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY +D K I+ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS++ KVD+A FEK++ +D+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK ES+ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESNGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG VN D++L+KG G KKR+VTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRIVTLRKSLYVDTSRRALEQVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S+FG GRFQT EK + G LK
Sbjct: 357 KWIDTASRFGKGRFQTPAEKHAFLGTLK 384
>gi|341889604|gb|EGT45539.1| CBN-RPL-3 protein [Caenorhabditis brenneri]
Length = 401
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/391 (64%), Positives = 323/391 (82%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I++ K+KKYC+ IRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIESDFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQVNGG++ QKVD+A EKQI +D VF +DEMID IGVT+G G++GV +RW +
Sbjct: 180 LVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTRGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHS 297
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD T+K I PMGGFP YG+VN+DYL+++G +GPKKR++TLR+SL+ QT R+A E+
Sbjct: 300 GSTEFDLTQKTINPMGGFPRYGLVNQDYLMLRGAILGPKKRLITLRKSLITQTKRVAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQTT EK + G+LK
Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 403
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 331/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVETPRGLRTFRTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R M L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVIAHTQMR-MLPLRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KVD+A E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWARAKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D+++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTEYDQSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIALKFIDTTSKFGHGRFQTAEEKKAFMGPLK 393
>gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae]
gi|60393717|sp|Q9NBK4.2|RL3_CAEBR RecName: Full=60S ribosomal protein L3
Length = 401
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/391 (64%), Positives = 323/391 (82%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQ+NGG++ QKVD+A EKQI +D VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHS 297
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD T+K I PMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+
Sbjct: 300 GSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKRLITLRKSLITQTKRVAHEK 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQTT EK + G+LK
Sbjct: 360 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
>gi|402076640|gb|EJT72063.1| 60S ribosomal protein L3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 392
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I ++E++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESKG-ASITREIERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV+F +G FEK + ID +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKA E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKADAED-SAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG VN D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 ELDVTKKKITPMGGFVRYGEVNNDFVMVKGSIPGTKKRVMTLRKSMFIHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|345565030|gb|EGX47986.1| hypothetical protein AOL_s00081g313 [Arthrobotrys oligospora ATCC
24927]
Length = 390
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRG+ KAFPKD+ KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGRCKAFPKDNAKKPVHLTAALGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPP++ VGVVGY++TPRGLRSL TVWA HL++E+RRRFYK
Sbjct: 61 DRPGAKMHKKEIVEAVTVIETPPMIAVGVVGYIETPRGLRSLTTVWAAHLSDEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ +G I+ LE++KKYCTV+R++AHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSETNGSA-IERDLERIKKYCTVVRLIAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+A+KVDFA FEK I I ++F+KDE+IDIIGVTKG G+ GV +RWG +
Sbjct: 179 MMEIQINGGSIAEKVDFAKNLFEKPIEIPSIFEKDEVIDIIGVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHPA V +TVARAGQ GYHHRT +N KIY++G S + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPAHVQWTVARAGQYGYHHRTSVNHKIYRVGLGS-DPNNAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D + K ITPMGGF YG V D+++IKG C G KKRV+TLR+SL+ TSR ALE++ +
Sbjct: 298 EYDVSNKTITPMGGFVRYGPVKNDFIMIKGSCPGVKKRVLTLRKSLITHTSRKALEKVDI 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFG G FQT++EK+K+ G LK
Sbjct: 358 KWIDTSSKFGRGGFQTSEEKSKFLGTLK 385
>gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
gi|30580497|sp|P59671.1|RL3_NEUCR RecName: Full=60S ribosomal protein L3
gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa]
gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
gi|336468587|gb|EGO56750.1| hypothetical protein NEUTE1DRAFT_95379 [Neurospora tetrasperma FGSC
2508]
gi|350289142|gb|EGZ70367.1| putative 60s ribosomal protein l3 [Neurospora tetrasperma FGSC
2509]
Length = 392
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYVKKHSDNNGAA-ITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV+F +G FEK + ID++F+KDE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQAGYHHRTSVNHKIYRIGKGDAED-SAAT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EVDVTKKKITPMGGFVRYGEINNDFVMVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK ++ G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
>gi|389638328|ref|XP_003716797.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
gi|351642616|gb|EHA50478.1| 60S ribosomal protein L3 [Magnaporthe oryzae 70-15]
gi|440474629|gb|ELQ43359.1| 60S ribosomal protein L3 [Magnaporthe oryzae Y34]
gi|440480504|gb|ELQ61164.1| 60S ribosomal protein L3 [Magnaporthe oryzae P131]
Length = 392
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKAHKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++ + +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-SESKASSVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+F +G FEK + ID +F+++EMIDII VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPVSIDTIFEQNEMIDIIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK E ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAEDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG +N D++++KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 EIDVTKKKITPMGGFVRYGEINNDFVMVKGSIPGTKKRVMTLRKSMFIHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT +EK Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPEEKKTYQGTLK 385
>gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi]
Length = 408
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 319/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGK KAFPKDDPSKP LT FLGYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKL+KKE EAVT++ETPP+V +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61 DRPGSKLNKKEIVEAVTVVETPPMVAIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK KK+E D GKK+I+ L+++ KY +V+R++ HTQ + +K +QKKAH
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIEVDLKQIAKYSSVVRLICHTQQKLLK-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV+FA FEK+IPI +VF KDEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSILDKVNFAREHFEKEIPIRSVFTKDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHP+R+ FTVARAGQ GYHHRTE+NKKIY + +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRIQFTVARAGQKGYHHRTEINKKIYDIRRGFHTENGKIV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D +K I PMGGFPHYG V +D+++IKGCCVGPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTEYDIADKSINPMGGFPHYGEVKQDFVIIKGCCVGPKKRVLTLRKSLLTHTKRKA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE I LKFIDTSSKFGHGRFQT +K + G LK
Sbjct: 360 LEVINLKFIDTSSKFGHGRFQTHADKMAFMGPLK 393
>gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator]
Length = 402
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 253/381 (66%), Positives = 320/381 (83%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+ ++ GSK++KKE
Sbjct: 1 MGFYPKKRSQRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREADRQGSKINKKEIV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYKNW KSKKKAFTK
Sbjct: 61 EAVTILETPPMIVVGIVGYIETPHGLRALSTVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ D G+K I+A L+K+KKYC+V+R++ HTQ++ ++ +QKKAH+ME+Q+NGG++
Sbjct: 121 SKKWQDDIGRKSIEADLKKIKKYCSVVRIITHTQMKLLR-QRQKKAHIMEVQLNGGTIED 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV +A EK +P+ +VF +DEMID+IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVQWAREHLEKPVPVSSVFARDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ ++A TE+D TEK
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVKNNASTEYDLTEK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R ALE+I LKFIDTSS
Sbjct: 300 TITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRSALEKINLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT +KA + G+LK
Sbjct: 360 KFGHGRFQTAADKASFMGQLK 380
>gi|302697183|ref|XP_003038270.1| 60S ribosomal protein L3 [Schizophyllum commune H4-8]
gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
Length = 421
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/385 (69%), Positives = 327/385 (84%), Gaps = 3/385 (0%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
++E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTAF+GYKAGMTH+VRD+++PG
Sbjct: 38 EYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAFMGYKAGMTHVVRDLDRPG 97
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
SK+HK+E EAVTI+ETPP++VVGVVGYV+TPRGLR+L TVWA HL++EVRRRFYKNW +
Sbjct: 98 SKMHKREVVEAVTIVETPPVMVVGVVGYVETPRGLRALTTVWASHLSDEVRRRFYKNWYR 157
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFT+Y KK +DGK I +LE+++KYCTV+RVLAHTQIRK GL QKKAHLMEI
Sbjct: 158 SKKKAFTRYAKKASENDGKL-ISRELERIRKYCTVVRVLAHTQIRKT-GLSQKKAHLMEI 215
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
QVNGGSVA KV+FA+G FEK + I +VF++DE +DII VTKG G+EGV RWG +LPRK
Sbjct: 216 QVNGGSVADKVEFAHGLFEKPVEIGSVFEQDECVDIIAVTKGHGFEGVTHRWGTKKLPRK 275
Query: 245 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
TH+GLRKVACIGAWHP++V ++VARAGQNGYHHRTE+NKKIY++G S + +A TE D
Sbjct: 276 THKGLRKVACIGAWHPSKVMYSVARAGQNGYHHRTEINKKIYRVGLGSDDG-NASTEHDI 334
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
T+K ITPMGGFPHYG+V DYL++KG G KKR++T+R+SL+ TSR LE++ LKFID
Sbjct: 335 TKKAITPMGGFPHYGIVKNDYLMLKGSIPGTKKRIITIRKSLMVHTSRRDLEKVSLKFID 394
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLKA 389
TSSKFGHG FQT +EKA + G LKA
Sbjct: 395 TSSKFGHGTFQTFEEKAAFLGTLKA 419
>gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis]
Length = 411
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 255/394 (64%), Positives = 323/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVKAFP+DDPSKPC LTAF+ YKAGMTH+VR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKAFPRDDPSKPCHLTAFISYKAGMTHVVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE +AVTI+E PP++VVGV+GY++TPRGLR+L T++A+HL++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVDAVTILEAPPMIVVGVIGYIETPRGLRTLKTLFAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KKKAFTK +K++ ++GK+ I +MKKYC VIRV+AHTQ+ K+ + QKK+H
Sbjct: 121 NWYACKKKAFTKSCRKWQDEEGKRQIDRDFNQMKKYCKVIRVIAHTQM-KLLPITQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++ +KVD+A EK +P+ +F KDEMIDIIGV KG G +GV +RW +
Sbjct: 180 IMEIQVNGGTIPEKVDYARDLLEKPVPVSNIFAKDEMIDIIGVNKGHGEKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+++VAR+GQ GYHHRTE+NKKIY+LG +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYSVARSGQKGYHHRTEVNKKIYRLGAGIHKEGGKLI 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE D T+K ITPMGGFPHYG V D+++IKGCC+GPKKRV+TLR+SL+ T R A
Sbjct: 300 KNNAATETDITDKSITPMGGFPHYGEVKNDFVMIKGCCIGPKKRVLTLRKSLITHTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LK+IDTSSKFGHGRFQT +EK + G LK
Sbjct: 360 LEKINLKWIDTSSKFGHGRFQTHEEKRAFMGPLK 393
>gi|351699299|gb|EHB02218.1| 60S ribosomal protein L3 [Heterocephalus glaber]
Length = 419
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/385 (68%), Positives = 321/385 (83%), Gaps = 7/385 (1%)
Query: 10 RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
RHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 26 RHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREVDRPGSKVNK 85
Query: 70 KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
KE EAVTI+ETPP+VVVG+VGYV+TPRGLRS TV+A+H+++E +RRFYKNW KSKKKA
Sbjct: 86 KEVVEAVTIVETPPMVVVGIVGYVETPRGLRSFKTVFAEHISDECKRRFYKNWHKSKKKA 145
Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189
FTKY KK++ D GKK + MKKYC VIR++AHTQ+R + L+QKKAHLMEIQVNGG
Sbjct: 146 FTKYCKKWQDDMGKKQLDKDFSSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGG 204
Query: 190 SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249
+VA+K+D+A E+QIP+ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGL
Sbjct: 205 TVAEKLDWARERLEQQIPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGL 264
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFD 303
RKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D
Sbjct: 265 RKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYD 324
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFI
Sbjct: 325 LSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFI 384
Query: 364 DTSSKFGHGRFQTTQEKAKYYGRLK 388
DT+SKFGHGRFQT +EK + G LK
Sbjct: 385 DTTSKFGHGRFQTIEEKKAFMGPLK 409
>gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 257/393 (65%), Positives = 321/393 (81%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP +TAFLGYKAGMTHIVR+V+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHMTAFLGYKAGMTHIVREVD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP++V+GVVGYV TP GLRS T++A+H+++E +RRFYKN
Sbjct: 61 RPGSKVNKKEVVEAVTIVETPPMIVIGVVGYVNTPSGLRSFKTIFAEHISDECKRRFYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ D+GKK ++ MKKYC VIRV+ HTQ+R + ++QKK+HL
Sbjct: 121 WYKSKKKAFTKYCKKWQDDEGKKQLEKDFALMKKYCQVIRVITHTQMRLLP-IRQKKSHL 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+Q+NGG++A KVD+A E+ IP++ VF +DEMID+IGVTKG GY+GV +RW +L
Sbjct: 180 MEVQLNGGTIADKVDWAREKLEQSIPVNTVFAQDEMIDVIGVTKGHGYKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKVVK 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D + K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 NNASTDYDLSNKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTSRRAQ 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 392
>gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae]
gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae]
Length = 415
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 317/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDAKKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV++A EK IP+ VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVNWARQHLEKPIPVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|452846836|gb|EME48768.1| hypothetical protein DOTSEDRAFT_67718 [Dothistroma septosporum
NZE10]
Length = 392
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 321/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKDD + LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDDQKQKPHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EAVT+IETPP+VVVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G K+I LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKNITRDLERIKKYCTVVRVLAHTQIHKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+F +G FEK + ID+VF++DEMID I VTKG G++GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGHGLFEKPVEIDSVFEQDEMIDCIAVTKGHGFQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRVGKGSDER-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD + K ITPMGGF YG V D++L+KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDHSNKQITPMGGFVRYGEVKNDFVLLKGSVPGVKKRVMTLRKSMFIHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTAAEKKQFVGTLK 385
>gi|361126129|gb|EHK98144.1| putative 60S ribosomal protein L3 [Glarea lozoyensis 74030]
Length = 391
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 318/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA LGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY + GK +I + ++ KYC+V+RVLAHTQIR+ LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYAS--GKNEIDREFARIAKYCSVVRVLAHTQIRQTP-LKQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV KV FA G FEK + I ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 178 LMEIQVNGGSVEDKVSFAKGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK + E +A T
Sbjct: 238 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRVGKGTDEG-NATT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D+L++KG G KKRV+TLR+S+ TSR ALE++ L
Sbjct: 297 EFDHSKKQITPMGGFVRYGEVKNDFLIVKGSVPGVKKRVMTLRKSMFVHTSRKALEKVDL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 357 KWIDTSSKFGHGAYQTPAEKHQFLGTLK 384
>gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
Length = 391
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 314/388 (80%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVT+++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV F FEK + ID +F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG VN D++++KG G KKRV+TLR+S+ TSR ALE+I L
Sbjct: 298 EIDVTKKKITPLGGFVRYGEVNNDFVMVKGSIPGVKKRVMTLRKSMFTHTSRRALEKINL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus]
Length = 402
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 253/381 (66%), Positives = 319/381 (83%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF P+KR+ RHRGKVKAFPKDD +KP LTAF+GYKAGMTH+VR+ ++PGSK++KKE
Sbjct: 1 MGFYPKKRSQRHRGKVKAFPKDDSNKPVHLTAFIGYKAGMTHVVREADRPGSKVNKKEIV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTI+ETPP++VVG+VGY++TP GLR+L TVWA+HL+E+ RRRFYKNW KSKKKAFTK
Sbjct: 61 EAVTILETPPMIVVGLVGYIETPHGLRALATVWAEHLSEDCRRRFYKNWYKSKKKAFTKA 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ D G+K I+A L+K+KKYC+V+R++AHTQ++ ++ +QKKAH+MEIQ+NGG++
Sbjct: 121 SKKWQDDLGRKSIEADLKKIKKYCSVVRIIAHTQMKLLR-QRQKKAHIMEIQLNGGTIED 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV +A EK +P+ VF DEMID+IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVQWAREHLEKPVPVSNVFASDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ ++A TE+D TEK
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKIVKNNASTEYDLTEK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R ALE+I LKFIDTSS
Sbjct: 300 TITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLLVHTKRAALEKINLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT +KA + G+LK
Sbjct: 360 KFGHGRFQTAADKASFMGQLK 380
>gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
Length = 407
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 320/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFP+DD SKP LTAFLGYKAGMTH++R+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPRDDRSKPVHLTAFLGYKAGMTHVLREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+++VG VGY++TP GLR+L TVWA+HL+E+ RRRFYK
Sbjct: 61 DRPGSKVNKKEIVEAVTIIETPPMIIVGAVGYIQTPHGLRALVTVWAEHLSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +S++KAFTK +KK++ + G K I +K+ KYC +RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYRSEQKAFTKASKKWQDELGVKSIDKSFKKIIKYCRCVRVIAHTQMKLLK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++AQKV + EK +P+ VF DEMID IGVTKGKGY+GV +RW +
Sbjct: 180 IMEIQLNGGNMAQKVKWIKEHLEKPVPVSQVFAPDEMIDCIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTEMNKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEMNKKIYRIGQGIHYKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D TEK ITPMGGFPHYG VN D+++IKGCCVGPKKRV+TLR+SLL T R A
Sbjct: 300 GNNASTDYDLTEKSITPMGGFPHYGEVNHDFIMIKGCCVGPKKRVITLRKSLLVHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSKFGHGRFQT Q+K + G LK
Sbjct: 360 LEKINLKFIDTSSKFGHGRFQTPQDKFAFMGALK 393
>gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster]
Length = 465
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 12 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 71
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 72 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 131
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 132 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAH 190
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 191 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 250
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 251 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 310
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 311 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 370
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 371 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 404
>gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102]
Length = 391
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 314/388 (80%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVT+++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV F FEK + ID +F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG VN D++++KG G KKRV+TLR+S+ TSR ALE+I L
Sbjct: 298 EVDVTKKKITPLGGFVRYGEVNNDFVMLKGSIPGVKKRVMTLRKSMFTHTSRRALEKINL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Talaromyces marneffei ATCC 18224]
Length = 392
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+YTKK+ T+ + +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTRYTKKH-TESSAASVTRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK I ID +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITP+GGF YG V D++++KG G KKRV+TLR++L Q SR A E+I L
Sbjct: 298 EFDVSKKTITPLGGFVRYGEVKNDFVIVKGSVPGVKKRVMTLRKTLYPQVSRKATEKIDL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG +QT EK + G LK
Sbjct: 358 KWIDTSSEFGHGAYQTPAEKRAFLGTLK 385
>gi|431900074|gb|ELK08009.1| 60S ribosomal protein L3 [Pteropus alecto]
Length = 533
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/380 (67%), Positives = 321/380 (84%), Gaps = 7/380 (1%)
Query: 10 RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
+HGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++K
Sbjct: 28 KHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNK 87
Query: 70 KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
KE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T++A+H+++E +RRFYKNW KSKKKA
Sbjct: 88 KEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKA 147
Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189
FTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQVNGG
Sbjct: 148 FTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGG 206
Query: 190 SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249
+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGL
Sbjct: 207 TVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGL 266
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFD 303
RKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D
Sbjct: 267 RKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYD 326
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFI
Sbjct: 327 LSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFI 386
Query: 364 DTSSKFGHGRFQTTQEKAKY 383
DT+SKFGHGRFQT +EK +
Sbjct: 387 DTTSKFGHGRFQTVEEKKAF 406
>gi|342319576|gb|EGU11523.1| 60S ribosomal protein L3 [Rhodotorula glutinis ATCC 204091]
Length = 439
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/388 (69%), Positives = 324/388 (83%), Gaps = 2/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+EHPR GSLGFLPRKRA+RHRGK K+FPKDD P LTAFLGYKAGMTH+VRD+
Sbjct: 50 MSHRKYEHPRCGSLGFLPRKRAARHRGKAKSFPKDDAKAPVHLTAFLGYKAGMTHVVRDL 109
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 110 DRPGSKMHKKEVVEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 169
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY KK+ + +LE++ KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 170 NWYRSKKKAFTKYAKKHAEQGSASSVARELERITKYCTVVRVLAHTQIRKT-GLAQKKAH 228
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+FA FEK + + ++F++DE ID+IGVT+G G+EGV RWG +
Sbjct: 229 LMEIQVNGGSVADKVEFAKSHFEKTVDVSSIFEQDENIDVIGVTQGHGFEGVTHRWGTKK 288
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V ++VARAGQ+GYHHRTE+NKK+Y++GKA E SA T
Sbjct: 289 LPRKTHKGLRKVACIGAWHPSKVMYSVARAGQDGYHHRTELNKKVYRIGKADDEG-SAST 347
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+K ITP+GGF YGVV D+++IKG C G KRV+TLR+SL+ TSR +LE+I L
Sbjct: 348 EFDITKKAITPLGGFVRYGVVKNDWVMIKGSCPGVVKRVLTLRKSLVPHTSRASLEKISL 407
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K IDTSSKFGHGRFQT +EK + G+LK
Sbjct: 408 KLIDTSSKFGHGRFQTKEEKDAFIGQLK 435
>gi|449300493|gb|EMC96505.1| hypothetical protein BAUCODRAFT_24265 [Baudoinia compniacensis UAMH
10762]
Length = 392
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP K LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKAVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKNHKKEIVEACTVIETPPMIVVGLVGYIETPRGLRSLKTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ D+ K+I LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-ADESGKNITQDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS++ KVD+A+G FEK + ID VF++DEMID I VTKG GY+GV +RWG +
Sbjct: 179 LMEIQVNGGSLSDKVDYAHGLFEKPVEIDNVFEQDEMIDCIAVTKGHGYQGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK S E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRVGKGSDEG-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG VN D++L+KG G KKRV+TLR+S+ T R ALE+++L
Sbjct: 298 DFDVSKKKITPMGGFVRYGEVNNDFILLKGSVPGVKKRVMTLRKSMFVHTKRSALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRQFLGTLK 385
>gi|355769998|gb|EHH62843.1| hypothetical protein EGM_19535, partial [Macaca fascicularis]
Length = 403
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 325/393 (82%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRK + RHRGKVK+F KDDPSKP LTAFLGYKAGM HIVR+V+
Sbjct: 2 SHRKFSAPRHGSLGFLPRKLSIRHRGKVKSFHKDDPSKPVHLTAFLGYKAGMAHIVREVD 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKN
Sbjct: 62 RPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKN 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK+ KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHL
Sbjct: 122 WHKSKKKAFTKHCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHL 180
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +L
Sbjct: 181 MEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKL 240
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQES 295
PRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH TE+NKKIYK+G+
Sbjct: 241 PRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHCTEINKKIYKIGQGYLIKDGKLIK 300
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 301 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 361 EKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger]
Length = 404
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/394 (64%), Positives = 322/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR HRG+V++FP+DD +KPC LTAFL YKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRHHRGRVRSFPRDDKTKPCHLTAFLAYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGV+GY++TPRGLR+L T++A+HL++E +RRFYK
Sbjct: 61 DRPGSKMNKKEVVEAVTILETPPIIVVGVIGYIQTPRGLRTLNTIFAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +KKKAF+K K++ +DGK+ I KMKKYCTVIRV+AH+Q+ K+ ++QKKAH
Sbjct: 121 NWYSAKKKAFSKACHKWQDEDGKQQIDQDFAKMKKYCTVIRVIAHSQM-KLLPVRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KV++A EK + + +F +DEMIDIIGVTKG GY+GV +RW +
Sbjct: 180 LMEIQINGGSIADKVEYARNLLEKPVKVADLFGQDEMIDIIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+F+VAR+GQ GYHHRTE+NKKIY++G +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAFSVARSGQKGYHHRTEINKKIYRVGVGIHKEGNKII 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE D T+K ITPMGGFPHYG V D+++IKGCC+G KKRV+TLR+SLL T R+A
Sbjct: 300 KNNASTEVDITDKSITPMGGFPHYGEVKNDFIMIKGCCIGTKKRVLTLRKSLLTHTKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLK+IDTSSK GHGRFQT EK + G LK
Sbjct: 360 LEKIKLKWIDTSSKIGHGRFQTHAEKQAFMGPLK 393
>gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|442618558|ref|NP_731548.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans]
gi|3122718|sp|O16797.3|RL3_DROME RecName: Full=60S ribosomal protein L3
gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster]
gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans]
gi|440217317|gb|AAN13496.2| ribosomal protein L3, isoform H [Drosophila melanogaster]
Length = 416
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster]
Length = 418
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 3 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 62
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 63 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 122
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 123 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 181
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 182 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 241
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 242 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 301
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 302 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 361
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 362 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 395
>gi|358386834|gb|EHK24429.1| hypothetical protein TRIVIDRAFT_79029 [Trichoderma virens Gv29-8]
Length = 391
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ +D+ I +LE++KKYCTV+R+LAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGASINRELERIKKYCTVVRILAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA+KVDF FEK + ID++F++DE+ID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDADD-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITP+GGF YG +N D++++KG G KKRVVTLR+S+ TSR ALE+I L
Sbjct: 298 DIDVTKKKITPLGGFVRYGEINNDFVMVKGSIPGTKKRVVTLRKSMWTHTSRKALEKINL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis]
gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis]
Length = 415
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba]
gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba]
Length = 416
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|429329033|gb|AFZ80792.1| 60S ribosomal protein L3, putative [Babesia equi]
Length = 388
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/389 (66%), Positives = 318/389 (81%), Gaps = 6/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLPRKR HRGKV++FPKDDPS P TAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCKMHRGKVRSFPKDDPSLPPHFTAFMGYKAGMTHVVTEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKLHKKE EAVTI+ETPP+VVVG+VGY++TP+GL+ L TVWA HL++E RRRFYK
Sbjct: 61 DRPGSKLHKKEVVEAVTIVETPPMVVVGLVGYIETPKGLKVLTTVWAAHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKYTKK++ +GK D ++ ++K Y TV+R + HTQ K+ + +KAH
Sbjct: 121 NWYKSKKKAFTKYTKKFQ--EGKVD--KEISRIKNYATVVRAICHTQPSKL-SISLRKAH 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+QVNGGS+A KVDF G FEK IP+ +VF ++EM+D +GVTKG G +GVV+R+GVTR
Sbjct: 176 IMEVQVNGGSIADKVDFVTGLFEKPIPVSSVFSENEMLDTVGVTKGHGTKGVVSRYGVTR 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G + +A T
Sbjct: 236 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLGTN-PRNAST 294
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVV ED+L++KGC VGPKKRV+TLR++L+ Q SR AL E+ L
Sbjct: 295 DADLTEKKITPMGGFPHYGVVKEDFLMLKGCIVGPKKRVITLRKTLVPQVSRAALAEVSL 354
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+FIDTSSK+GHGRFQT+ EK K+YG LK+
Sbjct: 355 RFIDTSSKWGHGRFQTSDEKKKFYGPLKS 383
>gi|115725235|ref|XP_791350.2| PREDICTED: 60S ribosomal protein L3-like [Strongylocentrotus
purpuratus]
Length = 404
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 319/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP LT FLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAV+I+ETPP+++VG+VGY++TP GLR+L TVWA+HL++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVSILETPPMIIVGLVGYIETPSGLRALKTVWAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTK +KK+ + GKK+I+ L MKKYCTVIRV+AHTQ++ M +QKKAH
Sbjct: 121 NWYRSKKKAFTKSSKKWADEMGKKEIEKDLNIMKKYCTVIRVIAHTQMKLM-NQRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ K+++A EK IP+ VF +DE+IDIIGVTKG G++GV +RWG +
Sbjct: 180 VMEIQLNGGSIGDKIEWARERLEKNIPVSEVFGQDELIDIIGVTKGHGFKGVTSRWGTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GYHHRTE+NKK+Y++GK A
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYHHRTEINKKVYRVGKGYHLDGAKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++ T D T+K I PMGGFPHYG V D+L+IKGC VGPKKRV+TLR+SLL T R+A
Sbjct: 300 KNNGGTIQDITDKSINPMGGFPHYGEVKNDFLMIKGCVVGPKKRVLTLRKSLLVHTKRVA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LK IDT+SKFGHGRFQT EK + G LK
Sbjct: 360 LEKITLKLIDTTSKFGHGRFQTHAEKKAFMGPLK 393
>gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+]
gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+]
Length = 392
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDM 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTII+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENSG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV+F +G FEK + ID +F+KDEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQINGGSVADKVEFGHGLFEKPVSIDTIFEKDEMIDVIAVTKGHGFSGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGF YG + D++++KG G KKR++TLR+S+ TSR ALE+++L
Sbjct: 298 EIDVTKKTITPMGGFVRYGEIKNDFVMVKGSVPGTKKRIMTLRKSMFIHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis]
gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis]
Length = 407
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 323/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH +R++
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREI 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTIIETPPLVVVG+VGYV+TPRGLRSL T++A+H+++E +RRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKK+FTKY KK++ ++GKK ++ MKKYC VIRV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVIIHTQM-KLLPLRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KVD+A+ EKQ+PI+ VF +DEMID+IGVTKGKG GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKVDWAHEKLEKQVPINTVFCQDEMIDVIGVTKGKGVRGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGIHLEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D T+K ITP+GGFPHYG VN DY+++KGC +G KKRV+TLR+SLL TSR A
Sbjct: 300 KNNAATQYDITDKSITPLGGFPHYGQVNNDYVMLKGCVMGTKKRVLTLRKSLLVHTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE I+LKFIDT+SKFGHG FQT QEK + G K
Sbjct: 360 LEAIELKFIDTTSKFGHGCFQTDQEKRAFMGSQK 393
>gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
Length = 474
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/400 (65%), Positives = 316/400 (79%), Gaps = 20/400 (5%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKA-----------------FPKDDPSKPCRLTAFLG 48
FEHPRHGSLGFLPRKRA+RHRGKVKA FPKDDP KP LTA +G
Sbjct: 72 FEHPRHGSLGFLPRKRAARHRGKVKASLTLSSIYRASMYQSHSFPKDDPKKPVHLTAMIG 131
Query: 49 YKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ 108
YKAGMTHIVRD+++PGSK+HKKE EAVT+IETPP+V VGVVGYV+TPRGLRSL TVWA+
Sbjct: 132 YKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLTTVWAE 191
Query: 109 HLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI 168
HL++EV+RRFYKNW +SKKKAFT+Y KK+ ++G I +LE++KKYCTV+RVLAHTQ+
Sbjct: 192 HLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENNGA-SISRELERIKKYCTVVRVLAHTQV 250
Query: 169 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKG 228
RK GLKQKKAHLME+Q+NGGSVA+KVDFA FEK + +VF+++E+ID+I VTKG G
Sbjct: 251 RKT-GLKQKKAHLMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTKGHG 309
Query: 229 YEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 288
YEGV RWG +LPRKTHRGLRK+ACIGAWHPA V FTVAR+GQ+GYHHRTE+ KKIY++
Sbjct: 310 YEGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVARSGQDGYHHRTEIGKKIYRI 369
Query: 289 GKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK 348
++ S T+FD TEK ITP+GGFPHYG+V D+++IKG C G KKRV+TLR+SL
Sbjct: 370 SNGEDKT-SGSTDFDTTEKAITPLGGFPHYGLVKNDFVMIKGSCPGVKKRVLTLRKSLQV 428
Query: 349 QTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
TSR ALE + LK+I TSS G G FQT EK + G+ K
Sbjct: 429 HTSRRALENVSLKWISTSSTMGKGVFQTPAEKDAFLGQRK 468
>gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
Length = 389
Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 317/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + I+ +L ++ KY +V+RVLAHTQ++K L QKKAH
Sbjct: 121 NWFKSKKKAFTKYSAKYAQDGAQ--IEKELARITKYASVVRVLAHTQVKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KV +A FEK + +D+VF+++EMID+I VT+G G+EGV RWG +
Sbjct: 178 LAEIQVNGGSIADKVQWAKEHFEKTVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G + ES+ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG VN D++++KG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKSINPMGGFVRYGNVNNDFVMVKGSIPGTKKRVVTLRKSLYVDTSRKALEQVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|342874075|gb|EGU76148.1| hypothetical protein FOXB_13320 [Fusarium oxysporum Fo5176]
Length = 391
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV F FEK + I ++F++DEMID++ VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVSFGQELFEKPVDISSIFEQDEMIDVVAVTKGHGFEGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQRGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG VN D++++KG G KKRV+TLR+++ QTSR ALE++ L
Sbjct: 298 EIDVTKKTITPLGGFVRYGEVNNDFVMVKGSIPGTKKRVMTLRKTMFPQTSRRALEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis]
gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis]
Length = 407
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/391 (66%), Positives = 322/391 (82%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ G K+ K+E EAVTIIETPPLVVVG+VGYV+TPRGLRSL T++A+H+++E +RRFY+
Sbjct: 61 HRTGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKK+FTKY+KK++ ++GKK ++ MKKYC VIRV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWYKSKKKSFTKYSKKWQDEEGKKQLEKDFSAMKKYCKVIRVIVHTQM-KLLPLRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA KVD+A+ EKQ+P+++VF +DEMID+IGVTKGKG GV +RW +
Sbjct: 180 VMEIQLNGGTVADKVDWAHEKLEKQVPVNSVFGQDEMIDVIGVTKGKGVRGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV++T+ARAGQ GYHHRTE+NKKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVAYTIARAGQKGYHHRTEINKKIYRIGKGVHMEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D T+K ITP+GGFPHYG VN D+L++KGC VG KKRV+TLR+SLL TSR A
Sbjct: 300 KNNAATQYDITDKSITPLGGFPHYGQVNNDFLMLKGCVVGTKKRVLTLRKSLLVHTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 LEPIELKFIDTTSKFGHGCFQTDQEKRAFMG 390
>gi|358399714|gb|EHK49051.1| hypothetical protein TRIATDRAFT_297774 [Trichoderma atroviride IMI
206040]
Length = 391
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ +D+ I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-SDNSGSTITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA+KVDF FEK + ID++F++DE+ID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQINGGSVAEKVDFGKDLFEKPVSIDSIFEQDEVIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQEGYHHRTSVNHKVYRIGKGDAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG VN D++++KG G KKRVVTLR+S+ TSR ALE+I L
Sbjct: 298 ETDVTKKKITPLGGFVRYGEVNNDFVMVKGSIPGTKKRVVTLRKSMWTHTSRKALEKISL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK ++ G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
>gi|440635244|gb|ELR05163.1| hypothetical protein GMDG_07204 [Geomyces destructans 20631-21]
Length = 606
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL+++++RRFYK
Sbjct: 61 DRPGAKSHKKEVVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDDLKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSEASG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGSVA+KV+FA G FEK + + ++F++DEMID+I VTKGKG+ GV +RWG +
Sbjct: 179 LMEVQINGGSVAEKVEFASGLFEKPVEVASIFEQDEMIDVIAVTKGKGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N K+Y++G + E + A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKVYRVGSGTDEGN-AST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF YG V D++++KG G KKRV+TLR+S+ TSR ALE++ L
Sbjct: 298 EFDVSKKTITPMGGFVRYGEVKNDFVMVKGSVPGVKKRVMTLRKSMWTHTSRKALEKVDL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK + G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKRAFLGTLK 385
>gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi]
Length = 410
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+K + RHRGK KAFPKDDPSKP LT FLGYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKCSKRHRGKAKAFPKDDPSKPVHLTCFLGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPPLV +GVVGY++TPRGLR+L TVWA+H+ EE +RRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIVETPPLVPIGVVGYIETPRGLRALKTVWAEHIGEEAKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK KK+E D GKK+I L+++ KY +V+R++ HTQ + +K +QKKAH
Sbjct: 121 NWSKSKKKAFTKACKKWEDDLGKKEIDNDLKQISKYASVVRLICHTQQKLLK-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV+FA FEK+IP+ +VF KDEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSILDKVNFAREHFEKEIPVRSVFSKDEMIDTIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM- 299
LPRKTH+GLRKVACIGAWHP+R+ +TVARAGQ GYHHRTE+NKKIY + + + M
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRIQYTVARAGQKGYHHRTEINKKIYDIRRGFHTENGKMV 299
Query: 300 -----TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
T++D +K I PMGGFPHYG V +D++L+KGCCVGPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTDYDLADKSINPMGGFPHYGEVKQDFMLLKGCCVGPKKRVLTLRKSLLTHTKRKA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE + LKFIDTSSKFGHGRFQT +K + G LK
Sbjct: 360 LEVVNLKFIDTSSKFGHGRFQTQADKMAFMGPLK 393
>gi|425765902|gb|EKV04543.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
PHI26]
gi|425779237|gb|EKV17313.1| Transcriptional corepressor Cyc8, putative [Penicillium digitatum
Pd1]
Length = 1267
Score = 545 bits (1405), Expect = e-152, Method: Composition-based stats.
Identities = 263/388 (67%), Positives = 319/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT +VRD+
Sbjct: 876 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTASMGYKAGMTTVVRDL 935
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 936 DRPGAKMHKKEIVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 995
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K + G I +LE+++KYCTV+RVLAHTQIR+ +KQKKAH
Sbjct: 996 NWYKSKKKAFTKYAKSHAESSGAS-ITRELERIQKYCTVVRVLAHTQIRQTP-IKQKKAH 1053
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV+ KV+FA FEK I ID++F+KDEMID+I VTKG G+ GV +RWG T+
Sbjct: 1054 LMEIQVNGGSVSDKVEFARNLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTK 1113
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N KI+++GK S E +A T
Sbjct: 1114 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSCNHKIFRIGKGSDEG-NAST 1172
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD ++K ITPMGGF HYG V D++++KG G KKRV+TLR++L QTSR A E+++L
Sbjct: 1173 EFDISKKQITPMGGFVHYGEVKNDFVMVKGSVPGVKKRVMTLRKTLYPQTSRRATEKVEL 1232
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG FQT +EK + G LK
Sbjct: 1233 KWIDTSSKFGHGAFQTFEEKKAFMGTLK 1260
>gi|406864005|gb|EKD17051.1| 60S ribosomal protein L3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 392
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 317/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY KK+ G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSESSG-SSITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+F +G FEK + I ++F++DEMID+I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFGHGLFEKPVEISSIFEQDEMIDVIAVTKGHGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT N K+Y++GK E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPCHVQWTVARAGQDGYHHRTSCNHKVYRIGKGDDEG-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD +K ITPMGGF YG V D++++KG G +KRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDVGKKQITPMGGFVRYGEVKNDFVIVKGSVPGVRKRVMTLRKSMFVHTSRKALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT QEK + G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPQEKHAFLGTLK 385
>gi|410965571|ref|XP_003989320.1| PREDICTED: 60S ribosomal protein L3 [Felis catus]
Length = 403
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/394 (68%), Positives = 330/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDSSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLR+ T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRTFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|387018308|gb|AFJ51272.1| 60S ribosomal protein L3-like [Crotalus adamanteus]
Length = 403
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 332/394 (84%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKD+PS+P LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDNPSQPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GSK++KKE EAVT++ETPP+V+VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRVGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ ++GKK ++ MKKYC VIRV+AHTQ+R M L+QKK+H
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVIAHTQMR-MLPLRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KV++A G E+Q+P+ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVEWARGKLEQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ Q
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYQIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D+++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 300 KNNASTEYDQSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIVLKFIDTTSKFGHGRFQTAEEKKAFMGPLK 393
>gi|405959119|gb|EKC25184.1| 60S ribosomal protein L3, partial [Crassostrea gigas]
Length = 484
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/393 (64%), Positives = 324/393 (82%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGS FLP+KR+ RHRGK K+FPKDD SKPC LTAFLGYKAGMTHIVR+V+
Sbjct: 85 SHRKFSAPRHGSKAFLPKKRSRRHRGKCKSFPKDDKSKPCHLTAFLGYKAGMTHIVREVD 144
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK +KKE EAVTI+ETPP+++VGVVGY++TP+GLR+ T++A+HL+E+ RRRFYKN
Sbjct: 145 RPGSKSNKKEIVEAVTILETPPMMIVGVVGYIETPKGLRAFKTIFAEHLSEDCRRRFYKN 204
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W ++KKKA+TKY+KK++ +DGKK+I+ KMKKYC VIRV+AHTQ++ +K +QKKAH+
Sbjct: 205 WYRAKKKAYTKYSKKWQDEDGKKEIERDFAKMKKYCKVIRVIAHTQMKLLKK-RQKKAHI 263
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+QVNGG+V QKVD+A EK +PI+ VF +DE ID IGVT+G+G++GV +RW +L
Sbjct: 264 MEVQVNGGTVNQKVDWAREKLEKAVPIEQVFAQDENIDCIGVTRGRGFKGVTSRWHCKKL 323
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 295
PRKTH+GLRKVACIGAWHP+RV F+VARAGQ GYHHRTE+NKKIY++GK
Sbjct: 324 PRKTHKGLRKVACIGAWHPSRVQFSVARAGQKGYHHRTEINKKIYRIGKGIHTKDGKVIK 383
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++ T++D +K ITPMGGFPHYG VN+D+++IKGCC+G KKRV+TLR+SLL + A+
Sbjct: 384 NNGATDYDPADKTITPMGGFPHYGEVNQDFVMIKGCCMGSKKRVITLRKSLLATFRKKAM 443
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDTSSK+GHGRFQT +EK + G LK
Sbjct: 444 EKISLKFIDTSSKYGHGRFQTFEEKKNFLGPLK 476
>gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta]
gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta]
Length = 416
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/394 (65%), Positives = 315/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEKINLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 399
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/387 (66%), Positives = 319/387 (82%), Gaps = 2/387 (0%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR +HRGKVK+FPKDD +KPC LTAF+ YKAGMTH++R+ +
Sbjct: 8 SHRKFSAPRHGSLGFLPRKRTKKHRGKVKSFPKDDATKPCHLTAFMAYKAGMTHVLREPD 67
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVGVVGY++TPRGLR+ TVWA+HLNEE +RRFYKN
Sbjct: 68 RPGSKMNKKEVVEAVTILETPPMVVVGVVGYIETPRGLRTYKTVWAEHLNEECKRRFYKN 127
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W +SKKKAFTK K+Y +G + I+ EKMKKYC VIRV+AHTQIR + L+QKK+H+
Sbjct: 128 WYRSKKKAFTKSCKRYGDANGVQTIERDFEKMKKYCKVIRVIAHTQIR-LVALRQKKSHV 186
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG++ +KVD+A EK++P D VF +DEMIDIIG TKGKG+ GV RWG +L
Sbjct: 187 MEIQVNGGNIVEKVDYARALLEKEVPADTVFSQDEMIDIIGATKGKGFRGVTFRWGTKKL 246
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
PRKTH+GLRKVACIG+WHP+RV F++ARAGQ GYHHRTE+NKKIY++G E +A T
Sbjct: 247 PRKTHKGLRKVACIGSWHPSRVGFSIARAGQTGYHHRTEVNKKIYRIGSGKDEK-NASTG 305
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
+D T K ITP+GGFPHYGVV +DY+++KGC +GPKKRV+TLR+S TSR+ALE+I LK
Sbjct: 306 YDTTVKKITPVGGFPHYGVVTQDYIMLKGCVMGPKKRVITLRKSRRVHTSRVALEKINLK 365
Query: 362 FIDTSSKFGHGRFQTTQEKAKYYGRLK 388
F+DT+SKFGHGRFQT EK + G LK
Sbjct: 366 FVDTTSKFGHGRFQTLDEKKAFMGTLK 392
>gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
gi|464637|sp|P34113.2|RL3_DICDI RecName: Full=60S ribosomal protein L3
gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum]
gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
Length = 398
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/390 (65%), Positives = 319/390 (81%), Gaps = 6/390 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGF PRKRA+RH+GKVK+FPKDD ++ LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSK+HKKE EAVTIIE PP+ +VG+VGYV+T +GL++ TVWAQHL++ RRR YK
Sbjct: 61 EKPGSKMHKKEIVEAVTIIECPPMYIVGLVGYVETAQGLKTYKTVWAQHLSDNFRRRLYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KSK KKAFTKY K+YET++GKK I+A L+ +KK C+V+RV+AHTQ+ K+K L QKKA
Sbjct: 121 NWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRCSVVRVIAHTQVHKLK-LTQKKA 179
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H++EIQVNGGS+ +KV+FA FEK + + VF ++E+ID+IGVTKGKG+ GV+ RWGV
Sbjct: 180 HVLEIQVNGGSIVEKVNFAVANFEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVR 239
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES---- 295
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ GYHHR E NKKIY++G+A E
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQI 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
+ TEFD TEK I PMGGF HYG+V ++L++KGC GP+KR +TLR+S+ QT R AL
Sbjct: 300 STGKTEFDLTEKTINPMGGFAHYGMVKHEFLMLKGCVAGPRKRALTLRKSITTQTGRAAL 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E+I LKFIDTSSKFGHG QT ++K KY+G
Sbjct: 360 EKITLKFIDTSSKFGHGLHQTAEDKTKYFG 389
>gi|344228878|gb|EGV60764.1| 60S ribosomal protein L3 [Candida tenuis ATCC 10573]
Length = 388
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKRA+RH+GK+K+FPKD+ SKP LTAFLGYKAGMT +VRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDNKSKPVSLTAFLGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLV+VGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVIVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++ KY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYAKDPA--SIERELARINKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSVA KV +A FEK + +D+VF+ EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVADKVAWAQEHFEKTVSVDSVFEDGEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GKA ES S T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKAGDES-SGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+DRT K+I PMGGF YG+VN D++++KG G +KR+VTLR+SL TSR A E + L
Sbjct: 297 SYDRTVKNINPMGGFVRYGLVNNDFIMVKGSIPGTRKRIVTLRKSLYTNTSRKATEPVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S FG GRFQT EK + G LK
Sbjct: 357 KWIDTASSFGKGRFQTPAEKHAFMGTLK 384
>gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
Length = 398
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 7 VSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTIVRDL 66
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K+HKKE EAVT+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 67 DRPGAKMHKKEVVEAVTVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 126
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y KK+ T+ + +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 127 NWYKSKKKAFTRYAKKH-TESSAASVTRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 184
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KVDFA+G FEK I ID +F+++E+ID+I VTKG G+ GV +RWG +
Sbjct: 185 LMEIQVNGGSVADKVDFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKK 244
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ GYHHRT +N KIY++GK S E +A T
Sbjct: 245 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEG-NAST 303
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D ++K ITP+GGF YG V D++++KG G KKRV+TLR++L Q SR A E+I L
Sbjct: 304 EYDVSKKTITPLGGFVRYGEVKNDFVIVKGSVPGVKKRVMTLRKTLYPQVSRKATEKIDL 363
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG +QT EK + G LK
Sbjct: 364 KWIDTSSEFGHGAYQTPAEKRAFMGTLK 391
>gi|346319212|gb|EGX88814.1| 60S ribosomal protein L3 [Cordyceps militaris CM01]
Length = 475
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 315/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD
Sbjct: 84 MSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDS 143
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 144 DRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLNTVWAEHLSDELKRRFYK 203
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I +LE+MKKYCTVIR+LAHTQIRK LKQKKAH
Sbjct: 204 NWYKSKKKAFTKYAKKHSEASG-ASIARELERMKKYCTVIRILAHTQIRKTP-LKQKKAH 261
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KVDF FEK + ID++F++DEMID+I VTKG G+ GV RWG +
Sbjct: 262 LMEIQVNGGSIADKVDFGKNLFEKPVSIDSIFEQDEMIDVIAVTKGHGFTGVTKRWGTKK 321
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT +N K+Y++GKA E SA T
Sbjct: 322 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SAST 380
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG V+ D++++KG G KKRV+TLR+S+ TSR ALE+I L
Sbjct: 381 EMDITKKSITPLGGFVRYGTVSNDFVMVKGSIPGVKKRVMTLRKSMFTHTSRRALEKINL 440
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK ++ G LK
Sbjct: 441 KWIDTSSEFGHGAFQTPAEKKQFQGTLK 468
>gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis]
gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis]
Length = 403
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP+V+VG+VGYV+TPRGLRSL T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDEDGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++A+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTIAEKVDWAREKLEQQVVIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVKNDFIMLKGCVIGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti]
Length = 415
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/394 (64%), Positives = 315/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F PRKRASRH+G++KAFPKDDP+KP LTAFL YKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFAPRKRASRHQGRIKAFPKDDPAKPVHLTAFLAYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFTK +KK+ D GKK I+ +KM +YC IRV+AH+QIR +K QKKAH
Sbjct: 121 NWHASKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIK-QGQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQ+NGG++ KV++ EK +P+ VF++DEMID + VTKGKG++GV +RW +
Sbjct: 180 IIEIQLNGGTIEDKVNWVKEHLEKPVPVADVFRQDEMIDCVAVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
+SA TE+D T+K ITPMGGFP YG +N D+L+IKGCC+G K+R++TLR+SLL T R +
Sbjct: 300 KNSAATEYDLTDKSITPMGGFPFYGEINNDFLMIKGCCIGAKRRIITLRKSLLVHTKRAS 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDTSSK GHGRFQT +K YYG LK
Sbjct: 360 LEQINLKFIDTSSKMGHGRFQTPADKRAYYGVLK 393
>gi|384491983|gb|EIE83179.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 387
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/388 (68%), Positives = 321/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK+HKKE EAVT+IE P +VVVGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYK
Sbjct: 61 ERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY +KY +G KD+ +LE++KKYC+V+RV+AHTQI K K L Q+KAH
Sbjct: 121 NWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSV QKVD+A FEK++ + ++F++DEMIDII TKG G+EGV RWG +
Sbjct: 178 IMEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++ + ++ S T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D TEK ITPMGGFPHYG VNED+++IKGCC G KKRV+TLR+SL T R ALE++ L
Sbjct: 297 EYDLTEKQITPMGGFPHYGEVNEDFVMIKGCCAGAKKRVITLRKSLTVHTKRSALEKVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT EK ++ G LK
Sbjct: 357 KFIDTSSKFGHGRFQTPAEKHQFMGTLK 384
>gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis]
gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
Length = 403
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/394 (67%), Positives = 329/394 (83%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSKRHRGKVKSFPKDDQSKPIHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP+V+VG+VGYV+TPRGLRSL T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMVIVGIVGYVQTPRGLRSLKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKVDWAREKLEQQVAITGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTAEEKKAFMGPLK 393
>gi|302915465|ref|XP_003051543.1| 60S ribosomal protein L3 [Nectria haematococca mpVI 77-13-4]
gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 391
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 317/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCT++RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTIVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV F FEK + I ++F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSVADKVAFGQELFEKPVDISSIFEQDEMIDVIAVTKGHGFNGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK E ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDAEDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG V D++++KG G KKRV+TLR+++ QTSR ALE++ L
Sbjct: 298 EIDVTKKTITPLGGFVRYGEVKNDFVMLKGSIPGVKKRVMTLRKTMFPQTSRRALEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|398411379|ref|XP_003857029.1| 60S ribosomal protein L3 [Zymoseptoria tritici IPO323]
gi|339476914|gb|EGP92005.1| hypothetical protein MYCGRDRAFT_102848 [Zymoseptoria tritici
IPO323]
Length = 392
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 320/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP + LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKQKTHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EA T+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAATVIETPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G K I LE++KKYCTV+RVLAHTQI K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKH-AEEGGKSITRDLERIKKYCTVVRVLAHTQISKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+F G FEK + ID++F+++EMID I VTKG G+ GV +RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFGQGLFEKPVEIDSIFEQNEMIDCIAVTKGHGFSGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V ++VARAGQ+GYHHRT +N K+Y++GK + E +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWSVARAGQDGYHHRTSVNHKVYRIGKGNDEG-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITP+GGF YG V D++L+KG G KKRV+TLR+S+ TSR ALE+++L
Sbjct: 298 DFDHSKKAITPLGGFVRYGEVKNDFVLLKGSVPGVKKRVMTLRKSMFIHTSRRALEKVEL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK ++ G LK
Sbjct: 358 KWIDTSSKFGHGAYQTPAEKKQFVGTLK 385
>gi|358443194|gb|AEU11843.1| control protein HCTL036 [Heliconius erato]
Length = 392
Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/384 (66%), Positives = 317/384 (82%), Gaps = 7/384 (1%)
Query: 11 HGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 70
HGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1 HGSMGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60
Query: 71 ETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAF 130
E EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAF
Sbjct: 61 EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120
Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS 190
TK +KK++ + G+K I+ +KM +YC+VIRV+AHTQ++ +K +QKKAH+MEIQVNGG+
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAHIMEIQVNGGN 179
Query: 191 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 250
+ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLR
Sbjct: 180 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLR 239
Query: 251 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDR 304
KVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ ++A TE+D
Sbjct: 240 KVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDL 299
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
+EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R ALE+I LKFID
Sbjct: 300 SEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINLKFID 359
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLK 388
TSSKFGHGRFQT +KA + G LK
Sbjct: 360 TSSKFGHGRFQTPADKAAFMGTLK 383
>gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni]
gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni]
Length = 414
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 314/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDASKPVHLTCFVGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV + EK I + VF +DEM+D +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|145324164|ref|NP_001077671.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 306
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/294 (86%), Positives = 278/294 (94%)
Query: 94 KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
KTPRGLRSL TVWAQHL+EEVRRRFYKNW KSKKKAFT Y K+Y+++DGKK IQAQLEKM
Sbjct: 11 KTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYAKQYDSEDGKKGIQAQLEKM 70
Query: 154 KKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 213
KKY TVIRVLAHTQIRKMKGLKQKKAH+MEIQ+NGG++AQKVDFAY FFEKQIPI+AVFQ
Sbjct: 71 KKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAYSFFEKQIPIEAVFQ 130
Query: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 273
KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQN
Sbjct: 131 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQN 190
Query: 274 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCV 333
GYHHRTE+NKKIY+LGK E+H+AMTE+DRTEKD+TPMGGFPHYG+V +DYL+IKGCCV
Sbjct: 191 GYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFPHYGIVKDDYLMIKGCCV 250
Query: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
GPKKRVVTLRQSLL QTSRLALEEIKLKFIDT+S FGHGRFQT+ EK ++Y R+
Sbjct: 251 GPKKRVVTLRQSLLTQTSRLALEEIKLKFIDTASIFGHGRFQTSLEKMRFYNRV 304
>gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
Length = 412
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 316/388 (81%), Gaps = 5/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 23 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 82
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PG+K+H+KE EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 83 ERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 142
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKAH
Sbjct: 143 NWYKSKKKAFTRYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAH 198
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+QVNGGSVA+KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG +
Sbjct: 199 LMEVQVNGGSVAEKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKK 258
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A T
Sbjct: 259 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NAST 317
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+++KG G +KRVVTLR++L Q SR A E++ L
Sbjct: 318 DFDVSKKRITPMGGFVRYGEVKNDYVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVDL 377
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK + G LK
Sbjct: 378 KWIDTSSKFGHGAYQTPAEKRAFLGTLK 405
>gi|414585655|tpg|DAA36226.1| TPA: hypothetical protein ZEAMMB73_366909 [Zea mays]
Length = 545
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 267/361 (73%), Positives = 292/361 (80%), Gaps = 45/361 (12%)
Query: 29 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
VK+FP+DDP KPC LTAFLGYKAGMTHIV V
Sbjct: 230 VKSFPRDDPKKPCHLTAFLGYKAGMTHIV-----------------------------VR 260
Query: 89 VVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQA 148
TPRGLR+L +VWAQHL+EEVRRRFYKNWCKSKKKAF+KY KY++D GKK+IQ
Sbjct: 261 SRSLAPTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFSKYALKYDSDAGKKEIQL 320
Query: 149 QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPI 208
QLEK IRKMKGLKQKKAHLMEIQVNGG++A KVD+ Y FFE ++P+
Sbjct: 321 QLEK---------------IRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPV 364
Query: 209 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVA 268
DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVA
Sbjct: 365 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVA 424
Query: 269 RAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLI 328
RAGQNGYHHRTEMNKK+YK+GKA QESH A TEFDRTEKDITPMGGFPHYG++ DYL+I
Sbjct: 425 RAGQNGYHHRTEMNKKVYKIGKAGQESHDASTEFDRTEKDITPMGGFPHYGIIKGDYLMI 484
Query: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LK
Sbjct: 485 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 544
Query: 389 A 389
A
Sbjct: 545 A 545
>gi|358443182|gb|AEU11837.1| control protein HCTL036 [Heliconius melpomene]
Length = 392
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/384 (66%), Positives = 317/384 (82%), Gaps = 7/384 (1%)
Query: 11 HGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKK 70
HGS+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KK
Sbjct: 1 HGSMGFYPKKRSRRHRGKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKK 60
Query: 71 ETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAF 130
E EAVT+IETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAF
Sbjct: 61 EIVEAVTVIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAF 120
Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS 190
TK +KK++ + G+K I+ +KM +YC+V+RV+AHTQ++ +K +QKKAH+MEIQVNGG+
Sbjct: 121 TKSSKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLK-QRQKKAHIMEIQVNGGN 179
Query: 191 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLR 250
+ KV +A EK IP+D+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLR
Sbjct: 180 IEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLR 239
Query: 251 KVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDR 304
KVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ ++A TE+D
Sbjct: 240 KVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDL 299
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
+EK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R ALE+I LKFID
Sbjct: 300 SEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINLKFID 359
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLK 388
TSSKFGHGRFQT +KA + G LK
Sbjct: 360 TSSKFGHGRFQTPADKAAFMGTLK 383
>gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
Length = 388
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/388 (65%), Positives = 317/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKR++ HRG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEQPRHGSLGFLPRKRSASHRGQVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+V+VGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVIVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY + ++I +L ++ KY +V+RVL HTQ++K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNG--EEINRELARITKYASVVRVLVHTQVKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+ KV++A FEK + +D+VF+KDEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSIEDKVNWAKEHFEKTVSVDSVFEKDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G + E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I P+GGF YG+VN D++L+KG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPLGGFVRYGLVNNDFVLLKGSIPGIKKRVVTLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKRAFMGTLK 384
>gi|400594267|gb|EJP62123.1| 60S ribosomal protein L3 [Beauveria bassiana ARSEF 2860]
Length = 392
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 314/388 (80%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD
Sbjct: 1 MSHRKHEEPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDS 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKSNKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ G I +LE+MKKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSESSG-ASIARELERMKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS++ KVDF FEK + +D++F++DEMID+I VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSISDKVDFGKELFEKPVSVDSIFEQDEMIDVIAVTKGHGFTGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP V +TVARAGQ+GYHHRT +N K+Y++GKA E SA T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPNHVQWTVARAGQDGYHHRTSVNHKVYRIGKAGAED-SAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITP+GGF YG V D++++KG G KKRV+TLR+S+ TSR ALE+I L
Sbjct: 298 DMDITKKKITPLGGFVRYGEVKNDFVMVKGSIPGVKKRVMTLRKSMFTHTSRRALEKINL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK ++ G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQFQGTLK 385
>gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta]
Length = 403
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/394 (65%), Positives = 321/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR SRH GKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+E PP+VVVG+ GYV+TPRGLR+ TV+A+H+ +E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ KKY VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSTKKYGQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV + W +
Sbjct: 180 LTEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KK+V+TLR+SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKQVLTLRKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 393
>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
Length = 387
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 316/388 (81%), Gaps = 2/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG +GFLPRKR + +RG V++FPKD + LTAF+GYKAGMTHIVR +
Sbjct: 1 MSHRKYECPRHGHMGFLPRKRCTHNRGHVRSFPKDKADQKPHLTAFMGYKAGMTHIVRVL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVTI+ETPP+VVVG+VGYV+TPRGLR+L TV+A+HL++ +RRFYK
Sbjct: 61 DRPGSKAHKQEIVEAVTILETPPMVVVGIVGYVETPRGLRTLTTVFAEHLDDSCKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFTKY + TD+GK+ ++ +L+K+ YC V+RVLAHTQI+K+K + QKKAH
Sbjct: 121 NWYNSKKKAFTKYAARMATDEGKEAMEQKLKKIVDYCQVVRVLAHTQIQKLK-IGQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++ +KV FA EK++ + VF+ EMID IGVTKGKG+EGV TRWG TR
Sbjct: 180 LMEIQVNGGNMEEKVAFAKSLLEKEVKVSDVFEPSEMIDTIGVTKGKGFEGVTTRWGTTR 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+RV FTV RAGQNGYHHRT++NKKIY++G A+ ++ SA T
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVHFTVPRAGQNGYHHRTDVNKKIYRIG-AAGDAKSAST 298
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D TEK ITPMGGFPHYG VN D++++KG +G KKRV+TLR+SL T R E I L
Sbjct: 299 EADLTEKSITPMGGFPHYGEVNNDWIMVKGGVMGSKKRVITLRKSLRTHTRRSDQENIVL 358
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
FIDTSSK GHGRFQTT EKAK+YG LK
Sbjct: 359 SFIDTSSKMGHGRFQTTAEKAKFYGTLK 386
>gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001]
Length = 391
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 315/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E+RRRFYK
Sbjct: 61 DRPGAKANKKEVVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K++ G I +LE++KKYCTV+RVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKQHSEASG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LTQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSV +KVDF YG FEK + ID++F+++EMID+I VT G GY GV +RWG +
Sbjct: 179 LMEIQVNGGSVPEKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK + +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITP+GGF YG V D++++KG G KKRV+TLR+S+ TSR ALE+I L
Sbjct: 298 DVDVTKKTITPLGGFVRYGEVKNDFVMVKGSIPGTKKRVMTLRKSMFTHTSRKALEKIDL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
Length = 452
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/394 (63%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KRASRH+G++KAFPKDDP+KP LTA+L YKAGMTHIVR+
Sbjct: 38 MSHRKFSAPRHGSMAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAYLAYKAGMTHIVREA 97
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+V+VG VGY++TP G R+LC VWAQHL+EE RRRFYK
Sbjct: 98 DRPGSKINKKEVVEAVTILETPPIVIVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYK 157
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFTK +KK+ D GKK I+ +KM +YC IRV+AH+QIR +K QKKAH
Sbjct: 158 NWHVSKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVIAHSQIRLIKQ-GQKKAH 216
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQ+NGG++ KV++ EK +P+ VF +DEM+D + VTKGKG++GV +RW +
Sbjct: 217 IIEIQLNGGTIEDKVNWVKEHLEKPVPVADVFGQDEMVDCVAVTKGKGFKGVTSRWHTKK 276
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G
Sbjct: 277 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVV 336
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
+SA TE+D T+K ITPMGGFP YG +N+D+L+IKGCC+G K+R++TLR+SLL T R +
Sbjct: 337 KNSAATEYDLTDKTITPMGGFPFYGEINQDFLMIKGCCIGAKRRIITLRKSLLTHTKRAS 396
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K YYG LK
Sbjct: 397 LEQIKLKFIDTSSKMGHGRFQTPADKKAYYGVLK 430
>gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
Length = 459
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 314/388 (80%), Gaps = 5/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 70 MSHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDL 129
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PG+K+H+KE EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYK
Sbjct: 130 ERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYK 189
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKAH
Sbjct: 190 NWYKSKKKAFTRYAK---THADASTTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAH 245
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG +
Sbjct: 246 LMEIQVNGGSIADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKK 305
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A T
Sbjct: 306 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NAST 364
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD ++K ITPMGGF YG V DY+++KG G +KRVVTLR++L Q SR A E++ L
Sbjct: 365 DFDVSKKRITPMGGFVRYGEVKNDYVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVDL 424
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHG +QT EK + G LK
Sbjct: 425 KWIDTSSKFGHGAYQTPAEKRAFLGTLK 452
>gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 322/388 (82%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLPRKRA+RHRGKVK+FPKDDPSKP LTA +GYKAGM+H+VRD+
Sbjct: 1 MSHRKFEEPRSGSLGFLPRKRAARHRGKVKSFPKDDPSKPVHLTALMGYKAGMSHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTKY KK+ ++G I ++E+++KYCTV+RVLAHTQIRK GLKQKKAH
Sbjct: 121 NWYRSKKKAFTKYAKKHSENNG-SSIAREIERIRKYCTVVRVLAHTQIRKT-GLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA K++FA FEK + + ++F+++++ID+IGVT G G EGV RWGVTR
Sbjct: 179 LMEIQVNGGSVADKLEFAKSHFEKTVDVRSIFEQNQVIDVIGVTSGHGTEGVTHRWGVTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V ++V RAGQNGYHHRTE NKKIY++G S + S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSNVMYSVPRAGQNGYHHRTEKNKKIYRIGTGS-DVKSGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D ++K ITPMGGFPHYG+VNED++++KG G KR + LRQSL TSR LE++ L
Sbjct: 298 EYDISDKTITPMGGFPHYGIVNEDFVMVKGGVPGTLKRPLVLRQSLQVHTSRTHLEQVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHG Q+ EK G+LK
Sbjct: 358 KFIDTSSKLGHGAVQSAAEKKAIMGQLK 385
>gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|548771|sp|P36584.2|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B
gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 272/388 (70%), Positives = 318/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTIIETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTIIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY + + I +LE++KKYC+V+RVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV++A FEK + I + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + L
Sbjct: 297 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFGHGRFQT E ++ G LK
Sbjct: 357 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384
>gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|730556|sp|P40372.2|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A
gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/388 (69%), Positives = 318/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFE PRHGSLGFLPRKRASR RGKVKAFPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRASRQRGKVKAFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVIETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY + + I +LE++KKYC+V+RVLAHTQIRK L QKKAH
Sbjct: 121 NWFKSKKKAFTKYAKKYA--ESTQSINRELERIKKYCSVVRVLAHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV++A FEK + I + F+++EMID+IGVT+GKG EG RWG R
Sbjct: 178 LMEIQVNGGSVADKVEWAREHFEKTVDIKSTFEQNEMIDVIGVTRGKGNEGTTARWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAG GY HRT++N KIY++G A ++ +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGNAGYMHRTQLNSKIYRIG-AGDDAKNAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK ITPMGGF YGVV D++++ G GP KRV+TLR+SLL TSR ALE + L
Sbjct: 297 DFDATEKRITPMGGFVRYGVVENDFVMLNGATPGPVKRVLTLRKSLLTHTSRKALEPVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFGHGRFQT E ++ G LK
Sbjct: 357 KWIDTASKFGHGRFQTPAEAKQFLGTLK 384
>gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis]
gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis]
Length = 415
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/395 (65%), Positives = 317/395 (80%), Gaps = 8/395 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR+SRHRGKVKAFPKDD +KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSSRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++ VG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKS-KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
NW KS KKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKA
Sbjct: 121 NWYKSEKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKA 179
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+MEIQ+NGGS+ KV + EK I + VF +DEM+D +GVTKGKG++GV +RW
Sbjct: 180 HIMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKGKGFKGVTSRWHTK 239
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES-- 295
+LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G +Q+
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTQDGKV 299
Query: 296 --HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKRV+TLR+SLL+ T R
Sbjct: 300 IKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRVITLRKSLLRHTKRS 359
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
ALE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 ALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 394
>gi|221116204|ref|XP_002167181.1| PREDICTED: 60S ribosomal protein L3-like [Hydra magnipapillata]
Length = 403
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 313/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGFLPRKR+ + ++K FPKDD +KPC LT F+G+KAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGNLGFLPRKRSKKQLARMKTFPKDDETKPCHLTGFIGFKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GSK+HKKE EAVTI+ETPP+V+VG+VGYV+TPRGLR L TVWA+HL++E +RRFYK
Sbjct: 61 DRVGSKVHKKEVVEAVTILETPPIVIVGIVGYVETPRGLRQLTTVWAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KAFTK +KK+ ++GKK I+ LEKM KYC VIRVL HTQ R + GLKQKKAH
Sbjct: 121 NWYKSKHKAFTKSSKKWTDENGKKSIERDLEKMIKYCKVIRVLVHTQQR-LVGLKQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG + KV++A EK I + VF +DEMID IG+TKG G++GV RWG +
Sbjct: 180 IMEIQINGGKIVDKVNWAKNHLEKTISVSNVFGQDEMIDAIGITKGHGFKGVTYRWGTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVAC+GAWHPAR+ FTV RAGQ GYHHR E NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACVGAWHPARIGFTVPRAGQCGYHHRVERNKKIYRIGRGIHTKDNKVV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D TEK ITPMGGFPHYG V ED+L++KG GPKKRV++LR+SLL QTSR A
Sbjct: 300 KNNASTDYDLTEKTITPMGGFPHYGEVTEDFLMLKGAIPGPKKRVISLRKSLLAQTSRKA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDTSSKFGHGRFQ QEK + G LK
Sbjct: 360 NEKITLKFIDTSSKFGHGRFQHDQEKKSFMGLLK 393
>gi|393215986|gb|EJD01477.1| 60S ribosomal protein L3 [Fomitiporia mediterranea MF3/22]
Length = 388
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 268/389 (68%), Positives = 333/389 (85%), Gaps = 3/389 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKSFPKDDPKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++K+E EAVT++ETPP++VVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMNKREVVEAVTVVETPPMMVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK +DG K + +LE+++KYCTV+RVLAHTQIR+ GLKQKKAH
Sbjct: 121 NWYRSKKKAFTRYAKK-AAEDGGKSVARELERIRKYCTVVRVLAHTQIRQT-GLKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGSVA KV+FA+G FEK + + ++F++DE+ID+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSVADKVEFAHGLFEKPVDVSSIFEQDEVIDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++GK E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRVGKGDDEN-NATT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITPMGGFPHYG+V D+L++KG G KKRV+TLR+SL+ TSR LE++ L
Sbjct: 298 DADATKKQITPMGGFPHYGIVKNDFLMLKGSIPGTKKRVITLRKSLMVHTSRRDLEKVTL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 358 KFIDTSSKFGHGSFQTAEEKAAFLGPLKA 386
>gi|403418102|emb|CCM04802.1| predicted protein [Fibroporia radiculosa]
Length = 939
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/385 (68%), Positives = 320/385 (83%), Gaps = 3/385 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+RHRGKVKAFPKDD KP LTA +GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAARHRGKVKAFPKDDSKKPVHLTAIMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVTIIETPPLVVVGVVGYV+TPRGLR+L TVWA HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTIIETPPLVVVGVVGYVETPRGLRTLTTVWASHLSDELKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ +DG K I +LE+++KYCTV+RVLAHTQIRK GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKH-AEDGGKSIARELERIRKYCTVVRVLAHTQIRKT-GLSQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV+FA+G FEK + + VF++DE++D+I VTKG G+EGV RWG +
Sbjct: 179 LMEIQVNGGSIADKVEFAHGLFEKPVEVGTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP++V F+VARAGQNGYHHRTE+NKKIY++G E+ +A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGDDEA-NAST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITPMGGFPHYG+V DYL++KG G KKRV+T+R+SL+ TSR LE+++L
Sbjct: 298 EHDITKKTITPMGGFPHYGIVKNDYLMLKGSIPGTKKRVITIRKSLMVHTSRRDLEKVQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYG 385
KFIDTSSKF E+ +G
Sbjct: 358 KFIDTSSKFARLSVPDISERTPSHG 382
>gi|357623605|gb|EHJ74691.1| ribosomal protein L3 [Danaus plexippus]
Length = 399
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 315/381 (82%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF P+KR+ RHRGKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE
Sbjct: 1 MGFYPKKRSRRHRGKVKAFPKDDASKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK
Sbjct: 61 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKS 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ + G+K I+ +KM +YC+VIRV+AHTQ++ +K +QKKAH+MEIQVNGGS+
Sbjct: 121 SKKWQDELGRKSIEKDFKKMIRYCSVIRVIAHTQMKLLK-QRQKKAHIMEIQVNGGSIED 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV++A EK IPID+VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWAREHLEKPIPIDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G+ ++A TE+D +EK
Sbjct: 240 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGQGIHTKDGKVIKNNASTEYDLSEK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R ALE+I LKFIDT+S
Sbjct: 300 SITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINLKFIDTAS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT +KA + G LK
Sbjct: 360 KFGHGRFQTPADKAAFMGTLK 380
>gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans]
Length = 413
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/394 (64%), Positives = 313/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD SKP LT F+GYKAGM+HIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSRRHRGKVKAFPKDDASKPVHLTCFIGYKAGMSHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS+KKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSQKKAFTKASKKWGDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV + EK + + VF +DEMID IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPVAVSNVFGQDEMIDCIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG V D+++IKGCC+G KKRV+TLR++LLK T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVTNDFVMIKGCCIGSKKRVITLRKTLLKHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi]
gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi]
Length = 417
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/394 (64%), Positives = 313/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR+ RHRGKVKA+PKDD SKP LT F+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAYPKDDASKPVHLTCFIGYKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++ VG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS+KKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWFKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGSV KV + EK I + VF +DEM+D +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSVEDKVKWVREHLEKPIQVSKVFGQDEMVDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGVHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLL+ T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLRHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis]
gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis]
Length = 420
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 263/412 (63%), Positives = 320/412 (77%), Gaps = 24/412 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ R RGK KAFPKD S P LTAFLGYKAGMTH+VR+V
Sbjct: 1 MSHRKFSAPRHGSMGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHVVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T RGLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSK+KAFTK +KK+ + G K+I L K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+VAQKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVAQKVDWIRQHFEKQIPVMNVFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG----------- 289
LPRKTH+GLRKVACIG+WHPARV TVARAGQ GY HRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIGLGLQAQLEVAK 299
Query: 290 -KASQESH-----------SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKK 337
+A++E + +A TEFD T K+ITPMGGFPHYG V DY++IKGCC+GPKK
Sbjct: 300 SEAAKEDNKDKAALIKPKGNASTEFDLTAKNITPMGGFPHYGEVRNDYVMIKGCCMGPKK 359
Query: 338 RVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
RV+TLR+++L Q SR + E+I LKFIDTSSKFGHGRFQT EK G LK+
Sbjct: 360 RVITLRKTILAQVSRRSKEKILLKFIDTSSKFGHGRFQTRAEKKAVMGPLKS 411
>gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon]
Length = 406
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 256/393 (65%), Positives = 316/393 (80%), Gaps = 7/393 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR RHR +VK FPKDD SKP LTAFLGYKAGMTHIVR
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRCRRHRPRVKTFPKDDKSKPVHLTAFLGYKAGMTHIVRVA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK+++KE EAVTIIETPP+V VGVVGY++TPRGLR L T+WA+HL+EE +RRFYK
Sbjct: 61 DKPGSKINRKEVLEAVTIIETPPMVCVGVVGYIQTPRGLRVLKTIWAEHLSEECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT +K++ GKK I+ ++ KMKKYCT IR++AHTQ+R ++ K KKAH
Sbjct: 121 NWHKSKKKAFTNAAQKWQDSLGKKMIKREIAKMKKYCTHIRIIAHTQVRILRK-KFKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+V++KVD+A FEKQIPID+VF +DEMID+IGVTKGKG +GV +RWG +
Sbjct: 180 IMEIQLNGGTVSEKVDWAVNHFEKQIPIDSVFAQDEMIDVIGVTKGKGMKGVTSRWGTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP RV FTVARAGQ GYHHRTE KKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPTRVQFTVARAGQKGYHHRTERTKKIYRIGKGIHTKEGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D TEK ITPMGGFPHYG VN+D++++KGC GP+KRV+ +R+ L QT R A
Sbjct: 300 KNNASTDYDLTEKTITPMGGFPHYGEVNQDFVMLKGCTAGPRKRVLCMRKCLYPQTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
+E+I L+FIDTSSK+GH FQT+ EK+ + G L
Sbjct: 360 MEKIDLQFIDTSSKYGHSCFQTSAEKSVFMGPL 392
>gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66]
gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66]
Length = 390
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 319/388 (82%), Gaps = 5/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLPRKR SR+RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDHTQPPHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKL+KKE EAVTIIETPP++ VG VGY++TPRGL++L TV+A +L+EE +RRFY+
Sbjct: 61 DKPGSKLNKKEVVEAVTIIETPPMICVGFVGYIETPRGLKALTTVFAGYLSEECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ KSK+KAFTKY K Y + + ++ ++ + K+YCTVIR L HTQ+ K GL +KKA
Sbjct: 121 NYYKSKRKAFTKYAKNYVEN---QRMEVEIARCKQYCTVIRALCHTQVSKT-GLNKKKAD 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V +KVDF FE+QIPI ++F ++EMID+IG++KGKGY+GV++RWGVT+
Sbjct: 177 LMEIQVNGGTVTEKVDFCVRCFEQQIPISSIFSENEMIDVIGISKGKGYKGVISRWGVTK 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKT RG+RKV+CIGAWHPARV F V RAGQ GY RTEMNKKIY++G + +A T
Sbjct: 237 LPRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTEMNKKIYRIGHGD-DPRNAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D TEK ITPMGGFP YGVV +D++++KGC VG KKR++TLR++L+ SR ALE I L
Sbjct: 296 YADLTEKTITPMGGFPRYGVVTQDFVMLKGCTVGCKKRLLTLRKALVPPVSRSALETINL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT+ EKAKYYG +K
Sbjct: 356 KFIDTSSKFGHGRFQTSAEKAKYYGPVK 383
>gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis]
gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis]
Length = 415
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/394 (64%), Positives = 312/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR+ RHRGKVKAFPKDD +KP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSCRHRGKVKAFPKDDATKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++ VG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS+KKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR + +QKKAH
Sbjct: 121 NWYKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIR-LINQRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV + EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWVREHLEKPIQVRNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIYTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLL+ T R A
Sbjct: 300 KNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLRHTKRSA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 360 LEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
>gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 327/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS++ KVD+A E+ IPI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+ +
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYRTKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K ITP+GGF HYG V D++++KGC +G KKRV+TLR+SLL Q+SR A
Sbjct: 300 KNNAATEYDLSNKSITPLGGFVHYGEVTNDFVMLKGCTIGVKKRVLTLRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 TEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar]
gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar]
gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar]
gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/394 (66%), Positives = 326/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS++ KVD+A E+ IPI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K ITP+GGF HYG V D++++KGC +G KKRV+TLR+SLL Q+SR A
Sbjct: 300 KNNAATEYDLSNKSITPLGGFVHYGEVTNDFVMLKGCTIGVKKRVLTLRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 TEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
Length = 384
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/377 (67%), Positives = 311/377 (82%), Gaps = 3/377 (0%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL FLPRKR++RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+E+PG+K+HKKE
Sbjct: 4 GSLAFLPRKRSARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTVVRDLERPGAKMHKKE 63
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPP++ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 64 IVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 123
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY K + + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAHLME+QVNGGS+
Sbjct: 124 KYAKNHSENTG-ASVSRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAHLMEVQVNGGSI 181
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KVDFA+G FEK I ID+VF++DEMID+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 182 ADKVDFAHGLFEKPIQIDSVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRK 241
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GK S E +A TEFD ++K ITP
Sbjct: 242 VACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIYRIGKGSDEG-NASTEFDVSKKQITP 300
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGF YG V DY+++KG G KKRV+TLR++L Q SR ALE+++LK+IDTSSKFGH
Sbjct: 301 MGGFVRYGEVKNDYVMLKGSVPGVKKRVLTLRKTLYPQVSRKALEKVELKWIDTSSKFGH 360
Query: 372 GRFQTTQEKAKYYGRLK 388
G FQT EK + G LK
Sbjct: 361 GAFQTPTEKRAFMGTLK 377
>gi|408399768|gb|EKJ78861.1| hypothetical protein FPSE_01004 [Fusarium pseudograminearum CS3096]
Length = 391
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 316/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAYLPRKRAARHRGKVKSFPKDDHKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+K +KKE EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGAKANKKEIVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGGS+A KV F FEK + + ++F++DEMID++ VTKG G+ GV RWG +
Sbjct: 179 LMEIQVNGGSIADKVSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK + ++A T
Sbjct: 239 LPRKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T+K ITP+GGF YG V D++++KG G KKRV+TLR+++ QTSR ALE++ L
Sbjct: 298 EIDVTKKTITPLGGFVRYGEVKNDFVMLKGSIPGVKKRVMTLRKTMFPQTSRRALEKVSL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 358 KWIDTSSEFGHGAFQTPAEKKQYQGTLK 385
>gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis]
Length = 403
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 324/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDP+KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPNKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMMVVGVVGYVNTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC ++RV+ HTQ+R + LKQK+AH
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFAAMKKYCQIVRVICHTQMRLLP-LKQKRAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGG+++ KVD+A E+ +PI+ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGTISDKVDWAREKLEQAVPINTVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKEGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT+R A
Sbjct: 300 KNNASTEYDLSNKSINPLGGFVHYGEVTNDFVMVKGCVVGTKKRVLTLRKSLLVQTNRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum]
Length = 388
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 317/388 (81%), Gaps = 5/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLPRKR SR+RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRNRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKL+KKE EAVTI+ETPP++ VG VGY++TP GLR+L TV+A +L+EE +RRFYK
Sbjct: 61 DKPGSKLNKKEVVEAVTIVETPPMICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ +SK+KAFTKY + Y + + ++A++ + K+YCTVIR L HTQ+ K GL +KKA
Sbjct: 121 NYYRSKRKAFTKYARNYAEN---QRMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKAD 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V+ K+DF FE+ IP+ +F ++EMIDIIG++KGKGY+GV++RWGVT+
Sbjct: 177 IMEIQVNGGTVSDKIDFCVRCFEQPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTK 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKT RG+RKV+CIGAWHPARV F V RAGQ GY RTE NKKIY++G+ + +A T
Sbjct: 237 LPRKTRRGVRKVSCIGAWHPARVQFQVPRAGQKGYGQRTETNKKIYRIGRG-DDPRNAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D TEK ITPMGGFP YGVVN+D+L++KGC VG KKR++TLR+SL+ +R ALE + L
Sbjct: 296 SADLTEKTITPMGGFPRYGVVNQDFLMLKGCTVGCKKRLLTLRKSLVPPVTRSALEVVNL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSKFGHGRFQT+ EKAKYYG K
Sbjct: 356 KFIDTSSKFGHGRFQTSAEKAKYYGPCK 383
>gi|430813862|emb|CCJ28827.1| unnamed protein product [Pneumocystis jirovecii]
Length = 402
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/385 (68%), Positives = 321/385 (83%), Gaps = 4/385 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRASRHRGKVK+FPKDDP KP LTAF+GYKAGMTH+VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRASRHRGKVKSFPKDDPKKPIHLTAFMGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+ LHKKE EAVT+IETPPLVVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGTILHKKEIVEAVTVIETPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEMKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y+KKY + K I +LE++KKYCTV+R++ HTQIRK+ QKKAH
Sbjct: 121 NWYKSKKKAFTRYSKKYS--ETSKPIARELERIKKYCTVVRIIVHTQIRKIP-FGQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NG +V +KVD+A FEK + + +VF++DEMID+IGVTKGKGYEGV TRWG R
Sbjct: 178 VMEIQLNGETVDKKVDWARDHFEKTVDVKSVFEQDEMIDVIGVTKGKGYEGVTTRWGTRR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++G + + +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIG-SGDDPRNAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK ITPMGGF YG V D++++ G GP KR++TLR+SLL TSR A E++ L
Sbjct: 297 DFDITEKQITPMGGFVRYGQVKNDFIILAGSTPGPVKRILTLRKSLLVHTSRKATEKVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYG 385
K+IDTSSKFGHGRFQT EK ++ G
Sbjct: 357 KWIDTSSKFGHGRFQTPAEKKQFMG 381
>gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
Length = 388
Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 320/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFE PRHGSLGFLPRKRA+R RGKVK+FPKDD SKP LTAFLGYKAGMTHIVRD+
Sbjct: 1 MSHCKFEQPRHGSLGFLPRKRAARARGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT++ETPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61 DRPGSKMHKREILEAVTVLETPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY + + I +LE++KKYC+V+RVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKYA--ETTQSITRELERIKKYCSVVRVLAHTQIRKTP-LTQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGSVA KV++A FEK + + +VF+++E++D+IG+TKGKG EGV TRWG R
Sbjct: 178 LMEIQINGGSVADKVEWAREHFEKTVDVKSVFEQNEIVDVIGITKGKGVEGVTTRWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V +TVARAG NGY HRT++N KIY++G + ++ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPSNVGWTVARAGNNGYMHRTQLNSKIYRIG-SGDDAKNGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD TEK ITPMGGF YG V DY+++ G GP KRV+TLR+SL TSR ALE I L
Sbjct: 297 DFDATEKRITPMGGFVRYGSVENDYVMLNGATPGPVKRVLTLRKSLFAHTSRKALEPINL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSSKFGHGRFQT+ E ++ G LK
Sbjct: 357 KWIDTSSKFGHGRFQTSAEAKQFLGTLK 384
>gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864]
Length = 416
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/389 (67%), Positives = 324/389 (83%), Gaps = 2/389 (0%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
+HRKF PRHGSLGF PRKR++ HRG+VK+FP+DD SKPC LTAFLGYKAGMTH+VR+V+
Sbjct: 21 AHRKFSAPRHGSLGFAPRKRSATHRGRVKSFPRDDASKPCHLTAFLGYKAGMTHVVREVD 80
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+ GSKL+KKE EAVTI+E PP+VVVG VGYV TPRGLR+L TVWA+HL+EEVRRRFYKN
Sbjct: 81 RMGSKLNKKEIVEAVTIVEAPPVVVVGAVGYVATPRGLRALTTVWAEHLSEEVRRRFYKN 140
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W + KKKAFTKY KKY T++GKK I+ + +++KKYC+V+R+L HTQ +K+ QKKAH+
Sbjct: 141 WYQCKKKAFTKYAKKYSTEEGKKSIEKEFDRIKKYCSVVRLLVHTQTKKLNLGGQKKAHI 200
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGGSVA K+ +A FEK+I + VF ++EM+D+IGVT+GKG+ GV R+G RL
Sbjct: 201 MEIQVNGGSVADKLKYARSHFEKEISLKDVFSENEMVDVIGVTRGKGFTGVTYRFGTRRL 260
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL--GKASQESHSAM 299
PRK+H+GLRKVACIGAWHPA V+ +VARAGQ GYHHRTE+NKKIY++ G +S ++A
Sbjct: 261 PRKSHKGLRKVACIGAWHPANVNRSVARAGQKGYHHRTELNKKIYRVGAGASSGAKNNAS 320
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TE+D TEK+ITP+GGFPHYG V ED+L++KGC +G KKRV+TLR+SLL TSR+ALE+
Sbjct: 321 TEYDITEKNITPLGGFPHYGQVKEDFLILKGCIMGAKKRVITLRKSLLVHTSRVALEKTN 380
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT EK + G LK
Sbjct: 381 LKFIDTSSKFGHGRFQTIAEKKAFMGALK 409
>gi|391335187|ref|XP_003741977.1| PREDICTED: 60S ribosomal protein L3-like [Metaseiulus occidentalis]
Length = 412
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 251/394 (63%), Positives = 315/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS GFLPRKR +RHRGKVK+FPKDD +KP LTAFLGYK+GMTHIVR+V
Sbjct: 1 MSHRKFHAPRHGSTGFLPRKRCARHRGKVKSFPKDDKTKPVHLTAFLGYKSGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVT+IETPP+V++GVVGY++TPRGLR+L T++A+H++++ RRRFYK
Sbjct: 61 DKPGSKVNKKEVVEAVTVIETPPIVIIGVVGYIETPRGLRALKTIFAEHVSDDARRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFT+ K+ +G K I+ +K++KYCTV+RV+ HTQ+ +K +QKKAH
Sbjct: 121 NWYNSKKKAFTRSALKWRQPEGLKMIERDFKKIQKYCTVVRVIVHTQMSMLK-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+A K+ FA EK +PI VF +DEMIDIIGVTKG G +GV +RW +
Sbjct: 180 IMEIQLNGGSIADKIKFAREHMEKAVPIKNVFAQDEMIDIIGVTKGHGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGDGFHTVDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
S++ TE+D T K I PMGGF HYG V +D++++KGC +GP+KRV+TLR+SL+ QT R A
Sbjct: 300 SNNGSTEYDNTNKSINPMGGFKHYGEVKQDFVMLKGCVMGPRKRVITLRKSLITQTKRAA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E I LKFIDTSSK GHGRFQT +EK+ + G LK
Sbjct: 360 TESITLKFIDTSSKMGHGRFQTHEEKSAFMGPLK 393
>gi|332859844|ref|XP_525601.3| PREDICTED: 60S ribosomal protein L3, partial [Pan troglodytes]
Length = 386
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/377 (67%), Positives = 316/377 (83%), Gaps = 7/377 (1%)
Query: 18 PRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVT 77
PRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVT
Sbjct: 1 PRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVT 60
Query: 78 IIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKY 137
I+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KSKKKAFTKY KK+
Sbjct: 61 IVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKW 120
Query: 138 ETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDF 197
+ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQVNGG+VA+K+D+
Sbjct: 121 QDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDW 179
Query: 198 AYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGA 257
A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGA
Sbjct: 180 ARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGA 239
Query: 258 WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITP 311
WHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P
Sbjct: 240 WHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINP 299
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGH
Sbjct: 300 LGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGH 359
Query: 372 GRFQTTQEKAKYYGRLK 388
GRFQT +EK + G LK
Sbjct: 360 GRFQTMEEKKAFMGPLK 376
>gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
Length = 395
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/377 (67%), Positives = 312/377 (82%), Gaps = 3/377 (0%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 15 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 74
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 75 IVEAVTIVETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFT 134
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY KK+ ++G I +LE++KKYCTV+RVLAHTQ+RK LKQKKAHLMEIQVNGGSV
Sbjct: 135 KYAKKHADENGSA-ITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAHLMEIQVNGGSV 192
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRK
Sbjct: 193 ADKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRK 252
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP V +TVARAGQ GYHHRT N K++++GK S E +A T+FD ++K ITP
Sbjct: 253 VACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEG-NASTDFDVSKKQITP 311
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGF HYG V DY+++KG G KKRV+TLR++L QT+R A E+++LK+IDTSSKFGH
Sbjct: 312 MGGFVHYGEVKNDYVMLKGSIPGVKKRVMTLRKTLYPQTNRRATEKVELKWIDTSSKFGH 371
Query: 372 GRFQTTQEKAKYYGRLK 388
G FQT +EK + G LK
Sbjct: 372 GAFQTPEEKRAFMGTLK 388
>gi|448523008|ref|XP_003868833.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis Co
90-125]
gi|380353173|emb|CCG25929.1| Rpl3 ribosomal protein, large subunit [Candida orthopsilosis]
Length = 389
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 322/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY +D K I+ +L ++KKY +V+RVLAHTQ++K L KKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQVKKTP-LASKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS++ KVD+A FEK++ +D+VF++DEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG+VN D++L+KG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGLVNNDFVLLKGSIPGTKKRVVTLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>gi|358365675|dbj|GAA82297.1| 60S ribosomal protein L3 [Aspergillus kawachii IFO 4308]
Length = 389
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 256/376 (68%), Positives = 310/376 (82%), Gaps = 3/376 (0%)
Query: 13 SLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 72
SL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 10 SLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTVVRDLDRPGAKMHKKEV 69
Query: 73 CEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTK 132
EA T+IETPPLV VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFTK
Sbjct: 70 VEAATVIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTK 129
Query: 133 YTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVA 192
Y KK+ ++G I +LE++KKYCTV+RVLAHTQ+RK LKQKKAHLMEIQVNGGSVA
Sbjct: 130 YAKKHAEENG-ASITRELERIKKYCTVVRVLAHTQVRKTP-LKQKKAHLMEIQVNGGSVA 187
Query: 193 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 252
KVDFA FEK I ID++F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRKV
Sbjct: 188 DKVDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKV 247
Query: 253 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPM 312
ACIGAWHP V +TVARAGQ GYHHRT N K++++GK S E +A T+FD ++K ITPM
Sbjct: 248 ACIGAWHPNHVQWTVARAGQMGYHHRTSCNHKVFRVGKGSDEG-NASTDFDISKKQITPM 306
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHG 372
GGF HYG V D++L+KG G KKRV+TLR++L QTSR A E+I+LK+IDTSSKFGHG
Sbjct: 307 GGFVHYGEVKNDFVLLKGSVPGVKKRVMTLRKTLYPQTSRRATEKIELKWIDTSSKFGHG 366
Query: 373 RFQTTQEKAKYYGRLK 388
FQT +EK + G LK
Sbjct: 367 AFQTPEEKRAFMGTLK 382
>gi|403218316|emb|CCK72807.1| hypothetical protein KNAG_0L01880 [Kazachstania naganishii CBS
8797]
Length = 387
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG LGFLPRKRA+ RG+VK+FPKDD SK LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TP +VVVG+VGYV+TPRGLRSL TVWA+HL++E++R+FYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPAIVVVGLVGYVETPRGLRSLTTVWAEHLSDEIKRKFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++KKY TV+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSTKYAQDG--TAIERELARIKKYATVVRVLVHTQIRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EIQ+NGGS++ KVD+A FEK + +D+VF+ +EMID++ VTKG G+EGV RWG TR
Sbjct: 178 MAEIQLNGGSISDKVDWAREHFEKTVSVDSVFENNEMIDVVAVTKGHGFEGVTHRWGTTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQNGYHHRT +N KIY++GK ES+ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKGEDESNGS-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF HYG V D++++KG G +KR+VTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTINPMGGFVHYGDVKNDFVMVKGSIPGTRKRIVTLRKSLYTNTSRKALEEVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|354548076|emb|CCE44812.1| hypothetical protein CPAR2_406150 [Candida parapsilosis]
Length = 389
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 322/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EE+RRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEIRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY +D K I+ +L ++KKY +V+RVLAHTQ++K L KKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYASD--AKQIETELARIKKYASVVRVLAHTQVKKTP-LASKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS++ KVD+A FEK++ +D+VF++DEMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISDKVDWAKEHFEKEVSVDSVFEQDEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S ES+ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDESNGS-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG+VN D++L+KG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGLVNNDFVLLKGSIPGTKKRVVTLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
Length = 403
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 257/394 (65%), Positives = 320/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KF PRHGSLGFLPRKR+SRH GKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHGKFSAPRHGSLGFLPRKRSSRHPGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGS+++KKE EAVTI+E PP+VVVG+VGYV+ PRGLR+ TV+A+H++ E +RRFYK
Sbjct: 61 DRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFKTVFAEHISNECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+ + L QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMHLLP-LCQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
MEI VNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 FMEIPVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL--GKASQES--- 295
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKKIYK+ G ++
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKKIYKICQGHLIKDGKLI 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TL +SLL QT R A
Sbjct: 300 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGAKKRVLTLCKSLLVQTKRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGSLK 393
>gi|241952212|ref|XP_002418828.1| 60S ribosomal protein L3 [Candida dubliniensis CD36]
gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis
CD36]
Length = 389
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 264/388 (68%), Positives = 322/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY TD K ++ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK++ +D+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG VN D++L+KG G KKRVVTLR+SL TSR A+E++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVTLRKSLYVDTSRRAVEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S+FG GRFQT EK + G LK
Sbjct: 357 KWIDTASRFGKGRFQTPAEKHAFMGTLK 384
>gi|339247749|ref|XP_003375508.1| 60S ribosomal protein L3 [Trichinella spiralis]
gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis]
Length = 405
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/390 (64%), Positives = 324/390 (83%), Gaps = 9/390 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP LTAF+GYKAGMTHIVR+V
Sbjct: 17 VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVG--VVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
+KPGSK++KK+ EAVT++ETPP+V+VG VVGY++TP+GLR+ T+WA+HL+++ +RR+
Sbjct: 77 DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
K ++KAFTK +KK++ + G K+IQ +M KYC VIRV+AHTQ+ K+ QKK
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHTQM-KLLHHGQKK 190
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+MEIQ+NGG++ +KV++A EKQ+P+D+VF +DEMID IGVTKGKG++GV +RW
Sbjct: 191 AHIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVTKGKGFKGVTSRWHT 250
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
+LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE+NKKIY++GK + + + +
Sbjct: 251 KKLPRKTHKGLRKVACIGAWHPSRVRYTVARAGQKGYHHRTEINKKIYRIGKGADKKNGS 310
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE+D TEK I PMGGFPHYG+VN+DY+LIKGCC+GPKKRV+TLR+SLL T R ALE+I
Sbjct: 311 -TEYDLTEKTINPMGGFPHYGMVNQDYVLIKGCCMGPKKRVITLRKSLLTHTKRSALEKI 369
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+LKFIDTSSKFGHGRFQT EK + G LK
Sbjct: 370 ELKFIDTSSKFGHGRFQTHAEKKAFMGLLK 399
>gi|363894901|gb|AEW42982.1| putative 60S ribosomal protein L3 [Haliotis diversicolor]
Length = 400
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 250/394 (63%), Positives = 315/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS GFLP+KR+ R RGKVK+FPKDD SKP LT FL YKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSKGFLPKKRSRRQRGKVKSFPKDDKSKPVHLTTFLTYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK +KKE EAVTI+E PP+V+ GV GY++TP GLR+L T+WA+HL+EE RRRFYK
Sbjct: 61 DRPGSKTNKKEVVEAVTILEAPPMVIAGVTGYIETPHGLRTLKTIWAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFTK KK++ + G K+I K+KKYCT+IRV+AHTQ + ++ +QKKAH
Sbjct: 121 NWSRSKKKAFTKSNKKWQDEAGMKEIDRDFAKLKKYCTIIRVIAHTQTKLLRK-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGGS+A KVD+A EK +P+ +VF++DE+ID+IGVTKG+G +GV +RW +
Sbjct: 180 LMEIQLNGGSIADKVDWAREHLEKPVPVSSVFEQDEVIDVIGVTKGRGVKGVTSRWHCKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHP+RV +TVARAGQ GYHHRTE NKKIY+LG
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQYTVARAGQKGYHHRTERNKKIYRLGAGIHTKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T+FD TEK ITPMGGFPHYG V D++++KGCCVGPKKR +TLR+SL+ Q +
Sbjct: 300 KNNAATDFDPTEKTITPMGGFPHYGEVRNDFVMLKGCCVGPKKRPLTLRKSLITQFKKRF 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+E+I LKF+DT+SK+GHGRFQT +E+ + G LK
Sbjct: 360 MEKITLKFVDTASKWGHGRFQTQEERRNFMGPLK 393
>gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGFLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS++ KVD+A E+ IPI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHPSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K ITP+GGF HYG V D++++KGC +G KKRV+TLR+SLL Q+SR A
Sbjct: 300 KNNAATEYDLSNKSITPLGGFVHYGEVTNDFVMLKGCTIGVKKRVLTLRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 TEKIDLKFIDTTSKFGHGRFQTVEEKKVFMGPLK 393
>gi|302307578|ref|NP_984302.2| 60S ribosomal protein L3 [Ashbya gossypii ATCC 10895]
gi|442570009|sp|Q759R7.2|RL3_ASHGO RecName: Full=60S ribosomal protein L3
gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895]
gi|374107517|gb|AEY96425.1| FADR206Wp [Ashbya gossypii FDAG1]
Length = 387
Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 319/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAV++++TPP+VVVGVVGY++TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPMVVVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++KKY +V+RVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAA--IERELARIKKYASVVRVLAHTQVRKTP-LVQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV++KVD+A FEK + +D+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSEKVDWAREHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N K+Y++GK E ++A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITPMGGF HYG VN D++++KG G +KRVVTLR+SL TSR ALEE+ L
Sbjct: 297 EFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTSTSRRALEEVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar]
Length = 403
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 261/394 (66%), Positives = 325/394 (82%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D+GKK ++ MKKYC V+R++AHTQ+R + L+QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIIAHTQMRLLP-LRQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGGS++ KVD+A E+ IPI VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEVQLNGGSISDKVDWARERLEQSIPITNVFTQDEMIDVIGVTKGHGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWH +RV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 240 LPRKTHRGLRKVACIGAWHLSRVAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D + K ITP+GGF HYG V D++++KGC +G KKRV+TLR+SLL Q+SR A
Sbjct: 300 KNNAATEYDLSNKSITPLGGFVHYGEVTNDFVMLKGCTIGVKKRVLTLRKSLLVQSSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 TEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 393
>gi|421975946|gb|AFX73005.1| ribosomal protein L3 [Spirometra erinaceieuropaei]
Length = 420
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/411 (63%), Positives = 318/411 (77%), Gaps = 24/411 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KF PRHGSLGF P+KR+ R RGK KAFPKD S P LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHGKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSAPPHLTAFMGFKAGMTHVVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE E VTI+E PP+V+VG+VGY++T +GLR+ T+WA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKKEIVEPVTILECPPMVIVGIVGYIQTAKGLRTFKTIWAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
++CKSK+KAFTK +KK+ + G I L+KMKKYCTVIRV+ HTQ+R MK +QKKAH
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINRDLKKMKKYCTVIRVIVHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V+QKVD+A EKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTVSQKVDWARSHLEKQIPVANVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH---- 296
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTEMNKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTEMNKKIYRIGLGIQAQAEAAK 299
Query: 297 -------------------SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKK 337
+A TE+D T K+ITPMGGFPHYG V DY+++KGC +GPKK
Sbjct: 300 MEAAKEENKELAALIKPKGNASTEYDLTAKNITPMGGFPHYGEVLNDYVMLKGCIMGPKK 359
Query: 338 RVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
RV+TLR+SLL+QTSR A E++ LKF+DTSSKFGHGRFQT EK + G LK
Sbjct: 360 RVITLRKSLLQQTSRRATEKVVLKFVDTSSKFGHGRFQTRAEKKAFMGPLK 410
>gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
Length = 389
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/388 (68%), Positives = 321/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY TD K I+ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQIETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK++ +D+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAREHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK S E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG V D++L+KG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVQNDFVLLKGSIPGIKKRVVTLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S+FG GRFQT EK + G LK
Sbjct: 357 KWIDTASRFGKGRFQTPAEKHAFMGTLK 384
>gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500]
Length = 399
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/393 (65%), Positives = 314/393 (79%), Gaps = 8/393 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKRA+RH+GK+K+FPKDD +KP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRAARHQGKIKSFPKDDRTKPVHLTAFMGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSK+HKKE EAVTI+E PP+ +VG+VGY++T +GLR TVWAQHL+ E RRRFYK
Sbjct: 61 EKPGSKMHKKEVVEAVTILECPPMYIVGLVGYLETAQGLRPYKTVWAQHLSNEFRRRFYK 120
Query: 121 NWCKSKKK-AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
W KS FTKYTKKYE D KK I + +K+ CTVIR +AHTQ+ K+ L QKKA
Sbjct: 121 QWYKSANHLVFTKYTKKYEND--KKSIDGAIAAIKRKCTVIRAIAHTQVHKL-NLGQKKA 177
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++EIQVNGGS+A KV++ FEK + +++VF ++EMIDIIGVTKGKG+ GV+ RWGV
Sbjct: 178 EVVEIQVNGGSIADKVNWVVENFEKTVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVR 237
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+LPRKTH+GLRKVACIGAWHP+RVS V RAGQ GYHHR E NKKIY++GKA + +++
Sbjct: 238 KLPRKTHKGLRKVACIGAWHPSRVSTAVPRAGQLGYHHRVETNKKIYRIGKAQPATGTSI 297
Query: 300 ----TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
TEFD T K ITPMGGF HYGVV ++L+IKGC GP+KRV+TLR+SL TSR AL
Sbjct: 298 PTGATEFDITHKTITPMGGFVHYGVVKHEFLMIKGCVTGPRKRVLTLRKSLHAATSRPAL 357
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E++ LKFIDTSSKFGHGRFQT+ EK+K G +K
Sbjct: 358 EKVVLKFIDTSSKFGHGRFQTSDEKSKVMGPMK 390
>gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1]
Length = 389
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/388 (67%), Positives = 322/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY TD K ++ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYATD--AKQVETELARIKKYASVVRVLAHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK++ +D+VF++DEMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAKEHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++GK + E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG VN D++L+KG G KKRVVTLR+SL TSR A+E++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGVKKRVVTLRKSLYVDTSRRAVEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S+FG GRFQT EK + G LK
Sbjct: 357 KWIDTASRFGKGRFQTPAEKHAFMGTLK 384
>gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
Length = 447
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 253/377 (67%), Positives = 310/377 (82%), Gaps = 3/377 (0%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRG+VK+FPKDDP KP LTA +GYKAGMT +VRD+++PG+K+HKKE
Sbjct: 67 GSLAYLPRKRAARHRGRVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKE 126
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EA T+IETPPL+ VGVVGY++TPRGLRSL TVWA+HL++EV+RRFYKNW KSKKKAFT
Sbjct: 127 IVEAATVIETPPLIAVGVVGYIETPRGLRSLATVWAEHLSDEVKRRFYKNWYKSKKKAFT 186
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY KK+ ++G I LE++KKYCTV+RVLAHTQIRK LKQKKAHLMEIQVNGGSV
Sbjct: 187 KYAKKHSEENG-ASITRDLERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSV 244
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A+KVDFA FEK I ID +F+KDEMID+I VTKG G++GV +RWG +LPRKTH+GLRK
Sbjct: 245 AEKVDFARNLFEKPIEIDTIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRK 304
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ GYHHRT N K++++GK S E++ A T+FD ++K ITP
Sbjct: 305 VACIGAWHPSHVQWTVARAGQMGYHHRTSCNHKVFRIGKGSDEAN-ASTDFDVSKKQITP 363
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
+GGF YG V D++L+KG G KKRV+TLR++L QTSR A E++ LK+IDTSSKFGH
Sbjct: 364 LGGFVRYGEVKNDFILLKGSVPGVKKRVMTLRKTLYPQTSRRATEKVDLKWIDTSSKFGH 423
Query: 372 GRFQTTQEKAKYYGRLK 388
G FQT +EK + G LK
Sbjct: 424 GAFQTPEEKRAFMGTLK 440
>gi|384483788|gb|EIE75968.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 384
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/383 (67%), Positives = 315/383 (82%), Gaps = 4/383 (1%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
+ PRHG LGF PRKR HRG+VKA+PKDD KP LTAF+GYKAGMTHIVRD+E+PGS
Sbjct: 3 MQSPRHGHLGFGPRKRTRSHRGRVKAYPKDDAKKPVHLTAFMGYKAGMTHIVRDLERPGS 62
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
K+HKKE EAVT+IE P +VVVGVVGYV+TPRGLRSL TVWA+HL+EE +RRFYKNW +S
Sbjct: 63 KMHKKEIVEAVTVIEVPAMVVVGVVGYVETPRGLRSLTTVWAEHLSEEAKRRFYKNWYRS 122
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTKY +KY +G KD+ +LE++KKYC+V+RV+AHTQI K K L Q+KAH+MEIQ
Sbjct: 123 KKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHTQISKAK-LHQRKAHIMEIQ 179
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
+NGGSV QKVD+A FEK++ + ++F++DEMIDII TKG G+EGV RWG +LPRKT
Sbjct: 180 LNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKGHGFEGVTHRWGTKKLPRKT 239
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
HRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY++ + ++ S TE+D T
Sbjct: 240 HRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIYRIATGA-DAKSGTTEYDLT 298
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
EK ITPMGGFPHYG VNED+++IKGCC G KKRV+TLR+SL T R ALE++ LKFIDT
Sbjct: 299 EKQITPMGGFPHYGEVNEDFVMIKGCCAGAKKRVITLRKSLTVHTKRSALEKVTLKFIDT 358
Query: 366 SSKFGHGRFQTTQEKAKYYGRLK 388
SSKFGHGRFQT EK ++ G LK
Sbjct: 359 SSKFGHGRFQTPAEKHQFMGTLK 381
>gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis]
gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis]
Length = 390
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/381 (65%), Positives = 314/381 (82%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
E VTI+E PP+++VG+VGY++TP+GLR+ TVWA+HL+EE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ D GK++I+ L+KMKKYC VIRVLAHTQ++ M+ +QKKAH+MEIQVNGGSV
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMR-RRQKKAHIMEIQVNGGSVGA 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
K+ +A EK + + VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEK 307
CIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+ + ++A T++D + K
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQGVHKKDGKLVVNNAATDYDTSNK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN DY+++KGC +GPKKR++TLR+SLL T R ALE+I LKFIDTSS
Sbjct: 300 SITPMGGFPHYGEVNCDYIMLKGCIMGPKKRIITLRKSLLVHTKRAALEKINLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT EK + G LK
Sbjct: 360 KFGHGRFQTPAEKHNFMGPLK 380
>gi|442753801|gb|JAA69060.1| Putative ribosomal protein [Ixodes ricinus]
Length = 390
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/381 (65%), Positives = 314/381 (82%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRLRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
E VTI+E PP+++VG+VGY++TP+GLR+ TVWA+HL+EE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILEVPPMMIVGLVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ D GK++I+ L+KMKKYC VIRVLAHTQ++ M+ +QKKAH+MEIQVNGGSV
Sbjct: 121 SKKWQEDLGKQEIERDLKKMKKYCKVIRVLAHTQMKLMR-RRQKKAHIMEIQVNGGSVGA 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
K+ +A EK + + VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVTVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEK 307
CIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+ + ++A T++D + K
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQGVHKKDGKLVVNNAATDYDTSNK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN DY+++KGC +GPKKR++TLR+SLL T R ALE+I LKFIDTSS
Sbjct: 300 SITPMGGFPHYGEVNCDYVMLKGCIMGPKKRIITLRKSLLVHTKRAALEKINLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT EK + G LK
Sbjct: 360 KFGHGRFQTPAEKHNFMGPLK 380
>gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus]
Length = 423
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/389 (66%), Positives = 326/389 (83%), Gaps = 4/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR+GSLGFLP+KR +HRG +++FPKDD +K LTAF+ YKAGMTHI R+V
Sbjct: 34 MSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREV 93
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE EAVTI+ETPP+VVVGVVGYV+TP+GLR+L TVWA HL++E +RRFYK
Sbjct: 94 DRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYK 153
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W SKKKAFT+Y KK+ D ++I A+L ++K+Y V+RV+AHTQ+ +K L+QKKAH
Sbjct: 154 HWYTSKKKAFTRYAKKFA--DAPQEIDAELGRIKQYAQVVRVIAHTQVGLVK-LRQKKAH 210
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EIQVNGG VA KVDFA G FE+++P+DAVF KDE ID++G +KG G EGVVTRWGVTR
Sbjct: 211 ICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTR 270
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARVSF+VARAGQ+GYHHRTE+NKKIY++GK + SA T
Sbjct: 271 LPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVA-SAST 329
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITP+GGFPHYG +NED+L++KGC +G KKR +TLR+SL+ + R+ LE+++L
Sbjct: 330 EADLTVKHITPLGGFPHYGEINEDWLMLKGCVIGCKKRCITLRKSLMSHSRRIHLEQVEL 389
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSK+GHGRFQT +EK K+ G L +
Sbjct: 390 KFIDTSSKYGHGRFQTKEEKDKFLGPLAS 418
>gi|346469559|gb|AEO34624.1| hypothetical protein [Amblyomma maculatum]
Length = 390
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/381 (65%), Positives = 314/381 (82%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF+P+KR+ R RGKVKAFPKDDP+KP LTAFLG+KAGMTHIVR+V+KPGSK++KKE
Sbjct: 1 MGFVPKKRSKRIRGKVKAFPKDDPTKPIHLTAFLGFKAGMTHIVREVDKPGSKVNKKEVV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
E VTI+ETPP+++VGVVGY++TP+GLR+ TVWA+HL+EE RRRFYKNW KSKKKAFTK
Sbjct: 61 EPVTILETPPMMIVGVVGYIETPKGLRAFKTVWAEHLSEECRRRFYKNWYKSKKKAFTKS 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
K+++ D G+++I+ +KMKKYC VIRVLAHTQ++ M +QKKAH+MEIQVNGG+V
Sbjct: 121 CKRWQEDLGRQEIERDFKKMKKYCKVIRVLAHTQMKLMH-RRQKKAHIMEIQVNGGTVGA 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
K+ +A EK +P+ VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KIKWAREHLEKPVPVSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEK 307
CIGAWHP+RV FTVARAGQ G+HHRTE+NKKIY++G+ + ++A T++D + K
Sbjct: 240 CIGAWHPSRVQFTVARAGQKGFHHRTEINKKIYRIGQGVHKKDGKLVINNAATDYDTSNK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG+VN DY+++KGC +GPKKRV+TLR+SLL T R ALE+I LKFIDTSS
Sbjct: 300 SITPMGGFPHYGIVNCDYVMLKGCIMGPKKRVITLRKSLLVHTKRTALEKINLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT EK + G LK
Sbjct: 360 KFGHGRFQTPAEKHTFMGPLK 380
>gi|426354155|ref|XP_004044533.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Gorilla gorilla
gorilla]
Length = 403
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 254/394 (64%), Positives = 316/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDP KP LTAFLGYKAGMTHI+R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPYKPVHLTAFLGYKAGMTHIMREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++P SK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H++ E +RRFYK
Sbjct: 61 DRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISNECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +D KK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+ E+Q+ ++ VF +DEMID+IGVTKG GY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LP KTHRGLRKVACIGAWHPARV+F+VARAGQ G HRTE+NKKIYK+G+
Sbjct: 240 LPLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQGYLIKDGKLI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T+ D ++K P+GGF HYG V D++++KGC VG KKRV+TL +SLL Q R A
Sbjct: 300 KNNASTDSDLSDKSTNPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLHESLLVQMKRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHG FQT ++K + G LK
Sbjct: 360 LEKIDLKFIDTTSKFGHGCFQTMEQKKAFMGPLK 393
>gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
Length = 404
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/394 (65%), Positives = 319/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR R +GKVKAFPKDD SKP LTAF+GYKAGMTH++R+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCRRAKGKVKAFPKDDASKPPHLTAFMGYKAGMTHVLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+ G+K K+E +AVTIIETPP+VVVGVVGY+ TP+G R+ T++A+HL+EE RRRFYK
Sbjct: 61 ERTGAKSTKREVVDAVTIIETPPMVVVGVVGYIATPKGRRAFRTIFAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFTKY KK++ DDGKK I+ ++MKKYC IRV+ HTQ++ + +QKK+H
Sbjct: 121 NWYSSKKKAFTKYAKKWQDDDGKKQIEKDFKQMKKYCINIRVIVHTQMKDLPH-RQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG++A+KVD+A EKQIP+ VF +DEMIDIIG+TKGKG++GV +RWG +
Sbjct: 180 IMEIQVNGGTIAEKVDWAREHLEKQIPVSQVFGQDEMIDIIGITKGKGFKGVTSRWGTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPARV + VARAGQ GY+HRTE+NKK+Y++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYGVARAGQKGYNHRTEINKKVYRVGTGIHVKDGKVI 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+D TEK ITP+GGFPHYG D+++I+GCCVGPKKRV+TLR+SLL QTSR +
Sbjct: 300 KNNAATEYDLTEKTITPLGGFPHYGECKNDFIMIRGCCVGPKKRVLTLRKSLLVQTSRRS 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDTSSKFGHGRFQT EK + G LK
Sbjct: 360 QEKITLKFIDTSSKFGHGRFQTIAEKKAFMGPLK 393
>gi|347970122|ref|XP_313303.5| AGAP003556-PA [Anopheles gambiae str. PEST]
gi|333468788|gb|EAA08849.5| AGAP003556-PA [Anopheles gambiae str. PEST]
Length = 404
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/381 (66%), Positives = 305/381 (80%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+ F P+KRASRH+G+VKAFPKDD SKP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTI+ETPPLVVVG VGY++TP G R+LC VWAQHL+EE RRRFYKNW SKKKAFTK
Sbjct: 61 EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHASKKKAFTKA 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK+ D GKK I+ +KM +YC IRV+AH+QIR +K QKKAH++EIQ+NGGS+A
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMVRYCKFIRVIAHSQIRLIKQ-GQKKAHIIEIQLNGGSIAD 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV++ EK IP+ VF +DEMID + VTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY+LG +SA TE+D T+K
Sbjct: 240 CIGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRLGAGIHTKDGKVIKNSAATEYDLTDK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFP YG +N+D+L+IKGCC+G K+RV+TLR+SLL T R ALE+IKLKFIDTSS
Sbjct: 300 SITPMGGFPFYGEINQDFLMIKGCCIGAKRRVITLRKSLLVHTKRSALEQIKLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
K GHGRFQT +K YYG LK
Sbjct: 360 KMGHGRFQTPADKRAYYGVLK 380
>gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio]
gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio]
Length = 403
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 259/394 (65%), Positives = 320/394 (81%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVGVVGYV TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K+++ ++GKK ++ MKKYC +IR++AHTQ+R + +QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPH-RQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG+++ KVD+A E+ IPI VF +DEMID+IGVTKG G +GV +RW +
Sbjct: 180 LMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D + K I P+GGF HYG V D+L++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 QEKIDLKFIDTTSKFGHGRFQTIEEKKNFMGPLK 393
>gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
Length = 458
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/389 (64%), Positives = 312/389 (80%), Gaps = 8/389 (2%)
Query: 3 HRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
HRK+E PRHGSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+
Sbjct: 68 HRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLER 127
Query: 63 PGSKLHKKETCEAVTIIETPP---LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
PG+K+H+KE EAVTI+ETPP ++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFY
Sbjct: 128 PGAKMHRKEVVEAVTIVETPPREQMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFY 187
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
KNW KSKKKAFT+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKA
Sbjct: 188 KNWYKSKKKAFTRYAK---THADAAATTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKA 243
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
HLME+QVNGGS+A+KV+FA+G FEK I +D VF+KDE++D+I VTKG G+ GV +RWG
Sbjct: 244 HLMEVQVNGGSIAEKVEFAHGLFEKPIDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTK 303
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A
Sbjct: 304 KLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKAGDEG-NAS 362
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T+FD ++K ITPMGGF YG V D++++KG G +KRVVTLR++L Q SR A E++
Sbjct: 363 TDFDVSKKQITPMGGFVRYGEVKNDFVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVD 422
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LK+IDTSSKFGHG +QT EK + G LK
Sbjct: 423 LKWIDTSSKFGHGAYQTPAEKRAFLGTLK 451
>gi|344302517|gb|EGW32791.1| 60S ribosomal protein L3 [Spathaspora passalidarum NRRL Y-27907]
Length = 389
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/388 (67%), Positives = 317/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRAS RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRASNQRGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D K ++ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWFKSKKKAFTKYSTKYAGD--AKQVETELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK++ + +VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSVSDKVDWAREHFEKEVSVSSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G + ES+ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG V D++L+KG G KKRVVTLR+SL TSR ALEE+ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVKNDFVLLKGSIPGIKKRVVTLRKSLYVDTSRRALEEVDL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+S+FG GRFQT EK + G LK
Sbjct: 357 KWIDTASRFGKGRFQTPAEKHAFLGTLK 384
>gi|392580132|gb|EIW73259.1| hypothetical protein TREMEDRAFT_37246 [Tremella mesenterica DSM
1558]
Length = 390
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/388 (62%), Positives = 314/388 (80%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PR GSL FLP+KRA+RHRG+VK+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPKKRAARHRGRVKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+IETPP+V+VGVVGY++TPRGLRSL TVWA+HL++E++RRFY+
Sbjct: 61 DRPGSKMHKREVVEAVTVIETPPIVIVGVVGYIETPRGLRSLTTVWAEHLSDELKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFT+Y KK+ ++G + + +LE++KKYCTV+RVLAHTQ+ K GL QKK+H
Sbjct: 121 NWYKSKKKAFTRYAKKHSENNG-QSVARELERIKKYCTVVRVLAHTQLSKT-GLVQKKSH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGSVA KV+FA FEK++ ++++F+KDE+ID+I VTKG G GV+ RWGVT+
Sbjct: 179 LAEIQVNGGSVADKVEFARSHFEKEVAVESIFEKDEVIDVIAVTKGHGVSGVIARWGVTK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRG RKVACIGAWHP++V F+VARAGQ GYH+R N KIY++G A + + T
Sbjct: 239 LPRKTHRGARKVACIGAWHPSKVMFSVARAGQRGYHNRRAQNLKIYRVG-AGNDPKNGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FD T K I P+GG+ Y + D++++KGC GP+KR+ TLR+SL TSR LE+ +L
Sbjct: 298 DFDITPKTINPLGGWTRYPDIKNDFVMVKGCTPGPRKRICTLRKSLQLHTSRTHLEQTQL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSS GH +QT EKA + G+LK
Sbjct: 358 KFIDTSSNRGHSGYQTPAEKAAFMGQLK 385
>gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
Length = 412
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/391 (63%), Positives = 308/391 (78%), Gaps = 4/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE---SHS 297
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G ++
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKNN 299
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A E+ T+K I PMGGF HYG VN+ +++I GCC+G KKR++TLR+SLLK T R AL++
Sbjct: 300 ASHEYYLTDKSIAPMGGFAHYGEVNDHFVMINGCCIGSKKRIITLRKSLLKHTKRSALDQ 359
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
IKLKFIDT K GHGRFQT +K + LK
Sbjct: 360 IKLKFIDTRRKMGHGRFQTPADKLAFMSPLK 390
>gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio]
gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio]
Length = 403
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/394 (65%), Positives = 319/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF P HGSLGFLPRKR RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPLHGSLGFLPRKRCKRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVGVVGYV TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTVVETPPMIVVGVVGYVMTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY K+++ ++GKK ++ MKKYC +IR++AHTQ+R + +QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKRWQDEEGKKQLEKDFSSMKKYCQIIRIIAHTQMRLLPH-RQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQ+NGG+++ KVD+A E+ IPI VF +DEMID+IGVTKG G +GV +RW +
Sbjct: 180 LMEIQLNGGTISDKVDWAREKLEQSIPIANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGVGYHNKDGKLV 299
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D + K I P+GGF HYG V D+L++KGC VG KKRV+TLR+SLL QTSR A
Sbjct: 300 KNNASTDYDLSNKSINPLGGFVHYGEVTNDFLMLKGCVVGTKKRVLTLRKSLLVQTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 360 QEKIDLKFIDTTSKFGHGRFQTIEEKKTFMGPLK 393
>gi|126136060|ref|XP_001384554.1| 60S ribosomal protein L3 [Scheffersomyces stipitis CBS 6054]
gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
CBS 6054]
Length = 389
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 316/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++H+G+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKHQGRVKSFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+E+VRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAATVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSEDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + ++ +L ++KKY +V+RVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KVDFA FEK + + +VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSIADKVDFAKEHFEKTVSVSSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V++TVARAGQNGYHHRT +N K+Y++G ES S T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVNWTVARAGQNGYHHRTSINHKVYRVGTEGDES-SGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG VN D++L+KG G +KRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVNNDFVLLKGSIPGIRKRVVTLRKSLYVDTSRRALEQVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/410 (62%), Positives = 311/410 (75%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T RGLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTARGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAK 299
Query: 296 -----------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 409
>gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi]
Length = 405
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 246/381 (64%), Positives = 304/381 (79%), Gaps = 7/381 (1%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+ F P+KRASRH+G++KAFPKDDP+KP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRIKAFPKDDPTKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVL 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYKNW +KKKAFTK
Sbjct: 61 EAVTILETPPIVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKNWHSAKKKAFTKA 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK+ D GKK I+ +KM +YC IRV+AH+QIR +K QKKAH++EIQ+NGGSV
Sbjct: 121 SKKWTDDLGKKSIEDTFKKMIRYCKFIRVIAHSQIRMVK-QGQKKAHIIEIQLNGGSVED 179
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV++ EK IP+ VF +DEMID + VTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 180 KVNWVKEHLEKPIPVSQVFSQDEMIDCVAVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 239
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RV+FTVARAGQ GYHHRTE+NKKIY++G +S TE+D TEK
Sbjct: 240 CIGAWHPSRVAFTVARAGQKGYHHRTELNKKIYRIGAGIHSKDGKIVKNSGSTEYDNTEK 299
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
+TPMGGFP YG +N+D+L++KGCC+G K+RV+TLR+SLL T R ALE+IKLKFIDTSS
Sbjct: 300 TVTPMGGFPFYGEINQDFLMLKGCCIGAKRRVITLRKSLLVHTKRSALEQIKLKFIDTSS 359
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
K GHGRFQT +K YYG LK
Sbjct: 360 KIGHGRFQTPADKRAYYGVLK 380
>gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
Length = 565
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/377 (65%), Positives = 304/377 (80%), Gaps = 5/377 (1%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 93 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKAHLMEIQVNGGS+
Sbjct: 153 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSI 208
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 209 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 268
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A TEFD ++K ITP
Sbjct: 269 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTEFDVSKKRITP 327
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGF YG V DY+++KG G +KRVVTLR++L Q SR A E++ LK+IDTSSKFGH
Sbjct: 328 MGGFVRYGEVKNDYVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVDLKWIDTSSKFGH 387
Query: 372 GRFQTTQEKAKYYGRLK 388
G +QT EK + G LK
Sbjct: 388 GAYQTPAEKRAFLGTLK 404
>gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus
cuniculus]
Length = 400
Score = 522 bits (1345), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/394 (64%), Positives = 317/394 (80%), Gaps = 10/394 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRK +S+HRGKV PKDDPSKP LTAFLGYKAG+THIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGS+++KKE EAVTI+ETPP+VV+G+VGYV+TPRGLR+ ++A+H++++ +RRFYK
Sbjct: 58 DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ D GK+ + MKKYC VIRVLAHTQ+R + L QKKAH
Sbjct: 118 NWHKSKKKAFTKYCKKWQDDAGKRQLDKDFSSMKKYCQVIRVLAHTQMRLLP-LWQKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+ V +RW +
Sbjct: 177 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKK 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQE 294
LP KTHRGLRKVACIGAWHPARV+F+VA AGQ GYHHRTE+NKKIYK+G+
Sbjct: 237 LPHKTHRGLRKVACIGAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQGYLIKDRKLI 296
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TL +SL QT R A
Sbjct: 297 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLHKSLQVQTKRRA 356
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHG FQT +EKA + G LK
Sbjct: 357 LEKIDLKFIDTTSKFGHGCFQTVEEKAAFMGPLK 390
>gi|114660361|ref|XP_001160309.1| PREDICTED: ribosomal protein L3-like [Pan troglodytes]
Length = 407
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPL+VVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLMVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKPV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
Length = 410
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/377 (65%), Positives = 304/377 (80%), Gaps = 5/377 (1%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 32 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 91
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 92 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 151
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKAHLMEIQVNGGSV
Sbjct: 152 RYAK---THADAATTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSV 207
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 208 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 267
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A T+FD ++K ITP
Sbjct: 268 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTDFDVSKKRITP 326
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGF YG V DY+++KG G +KRVVTLR++L Q SR A E++ LK+IDTSSKFGH
Sbjct: 327 MGGFVRYGEVKNDYVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVDLKWIDTSSKFGH 386
Query: 372 GRFQTTQEKAKYYGRLK 388
G +QT EK + G LK
Sbjct: 387 GAYQTPAEKRAFLGTLK 403
>gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum]
gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/410 (61%), Positives = 311/410 (75%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAK 299
Query: 296 -----------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 409
>gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 395
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/391 (64%), Positives = 322/391 (82%), Gaps = 5/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD-DPSKPCRLTAFLGYKAGMTHIVRD 59
MSHRKFE PRHG+LGFLP+KR H G++++FPKD D S P LTAF YKAGMTH+VR
Sbjct: 1 MSHRKFEAPRHGNLGFLPKKRTKHHSGRIRSFPKDNDASAPPHLTAFRAYKAGMTHVVRG 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
V++PG+ +HK+E +AV+I+ETPP+VVVGVVGY++TPRGLR+L TV+A+HL+EE +RR Y
Sbjct: 61 VDRPGAVMHKREVVDAVSILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEFKRRAY 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
KNW KSK+KA+TKY KKY +DGK DI+ +LE++ K+C V+RV+ H+Q++K+ L+ +KA
Sbjct: 121 KNWYKSKRKAYTKYAKKYTENDGK-DIEKELERIAKHCKVVRVITHSQVKKLH-LRIRKA 178
Query: 180 HLMEIQVNGGSVAQ-KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
H+ME+Q+NGG+ A+ KVDFA FEK++ +D+VF KDE+ID++GVTKG GYEGV TRWGV
Sbjct: 179 HIMEVQINGGADAKAKVDFAKSLFEKEVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGV 238
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
+RLPRKTHRGLRKVACIG+WHPARVS TV RAGQNGYHHRTEMNKKIY++GK S S
Sbjct: 239 SRLPRKTHRGLRKVACIGSWHPARVSDTVPRAGQNGYHHRTEMNKKIYRIGKKGDNS-SC 297
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
T+ D TEK ITPMGGF HYG + ED+++IKG CVG KKR + LR+SL+K +SR LE I
Sbjct: 298 QTDADLTEKSITPMGGFVHYGQIREDWVMIKGACVGVKKRPLILRKSLMKHSSRKHLESI 357
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
L+FIDTSSK GHGRFQT +EKAK+ G L +
Sbjct: 358 DLRFIDTSSKLGHGRFQTAEEKAKFLGPLAS 388
>gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo]
gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis]
Length = 393
Score = 521 bits (1343), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/388 (64%), Positives = 305/388 (78%), Gaps = 6/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR G+LGF P+KR RGK+++FPKDDP+KP TAF+GYKAGMTH+ +
Sbjct: 1 MSHRKFERPRSGNLGFFPKKRCKSQRGKIRSFPKDDPTKPPHFTAFMGYKAGMTHVTHEP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKK+T EAVTIIETPP++VVG+VGY++TPRGLR L TVWA HL++E RRRFYK
Sbjct: 61 DKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLTTVWAGHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ KDI ++ YCTV+R + HTQ K L KKA
Sbjct: 121 NWYKSKKKAFTKYAKKFAETKMSKDI----SRIVNYCTVVRAICHTQPSKTP-LSMKKAF 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQVNGG+V +KVD+ FE+ +P++AVF +EM+D++GVTKG G +GV++R+GVTR
Sbjct: 176 IIEIQVNGGTVQEKVDYVTKMFEQPLPVNAVFASNEMVDVLGVTKGHGMKGVISRFGVTR 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG+WHPARV F V R+GQ GY HRTE NKKIY+LG S +A T
Sbjct: 236 LPRKTHRGLRKVACIGSWHPARVQFQVPRSGQKGYFHRTERNKKIYRLGLGSN-PRNAST 294
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYG V +D+L+IKGC VG KKR + +R++L+ Q SR AL EI L
Sbjct: 295 DADLTEKQITPMGGFPHYGEVKDDFLMIKGCIVGTKKRPIVIRKTLVPQVSRDALAEINL 354
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+FIDTSSK+GHGRFQT+ EK KYYG LK
Sbjct: 355 RFIDTSSKWGHGRFQTSGEKQKYYGPLK 382
>gi|380474654|emb|CCF45659.1| 60S ribosomal protein L3 [Colletotrichum higginsianum]
Length = 391
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/377 (64%), Positives = 305/377 (80%), Gaps = 3/377 (0%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12 GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAV+II+TPP++VVG+VGY++TPRGLRSL TVWA+HL++E+RRRFYKNW KSKKKAFT
Sbjct: 72 VVEAVSIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIRRRFYKNWYKSKKKAFT 131
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY K++ G I ++E++KKYCTV+RVLAHTQIRK L QKKAHLMEIQVNGGS+
Sbjct: 132 KYAKQHSESSG-ASITREIERIKKYCTVVRVLAHTQIRKTP-LTQKKAHLMEIQVNGGSI 189
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KVDF YG FEK + ID++F+++EMID+I VT G GY GV +RWG +LPRKTH+GLRK
Sbjct: 190 ADKVDFGYGLFEKPVTIDSIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLPRKTHKGLRK 249
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GK + +A T+ D T+K ITP
Sbjct: 250 VACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKVYRIGKGDADD-NASTDVDVTKKTITP 308
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
+GGF YG V D++++KG G KKRV+TLR+S+ TSR ALE+I LK+IDTSS+FGH
Sbjct: 309 LGGFVRYGEVKNDFVMVKGSIPGTKKRVMTLRKSMFTHTSRKALEKIDLKWIDTSSEFGH 368
Query: 372 GRFQTTQEKAKYYGRLK 388
G FQT EK +Y G LK
Sbjct: 369 GAFQTPAEKKQYQGTLK 385
>gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
Length = 557
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/377 (65%), Positives = 304/377 (80%), Gaps = 5/377 (1%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+E+PG+K+H+KE
Sbjct: 33 GSLAYLPRKRAARHRGKVKSFPKDDPKKPVHLTATMGYKAGMTTIVRDLERPGAKMHRKE 92
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPP++ VG+VGY++TPRGLRSL TVWA HL++EV+RRFYKNW KSKKKAFT
Sbjct: 93 IVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVWADHLSDEVKRRFYKNWYKSKKKAFT 152
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
+Y K T +LE++K YCTV+R+LAHTQIRK LKQKKAHLMEIQVNGGS+
Sbjct: 153 RYAK---THADAASTTRELERIKNYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSI 208
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A KV+FA+G FEK I +D+VF+KDE++D+I VTKG G+ GV +RWG +LPRKTH+GLRK
Sbjct: 209 ADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLPRKTHKGLRK 268
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
VACIGAWHP+ V +TVARAGQ+GYHHRT N KIY++GKA E +A T+FD ++K ITP
Sbjct: 269 VACIGAWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEG-NASTDFDVSKKRITP 327
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGF YG V DY+++KG G +KRVVTLR++L Q SR A E++ LK+IDTSSKFGH
Sbjct: 328 MGGFVRYGEVKNDYVMLKGSIPGVRKRVVTLRKTLWPQVSRKATEKVDLKWIDTSSKFGH 387
Query: 372 GRFQTTQEKAKYYGRLK 388
G +QT EK + G LK
Sbjct: 388 GAYQTPAEKRAFLGTLK 404
>gi|399215964|emb|CCF72652.1| unnamed protein product [Babesia microti strain RI]
Length = 416
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 258/414 (62%), Positives = 316/414 (76%), Gaps = 33/414 (7%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGFLPRKR R RGK+++FPKDD SKP L AF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRRGSLGFLPRKRCRRQRGKIRSFPKDDQSKPTHLCAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EAVTIIE PP++VVG+VGY+++ RGLR L TVWA HL++E +RRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTIIECPPMIVVGLVGYIES-RGLRVLSTVWAGHLSDECKRRFYK 119
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK+ T ++++L ++K YCTV+R + HTQ K + +K+H
Sbjct: 120 NWYKSKKKAFTKYSKKFITT----RMESELARIKNYCTVVRAICHTQPSKT-SIGLRKSH 174
Query: 181 LMEIQVNGGSVAQK--------------------------VDFAYGFFEKQIPIDAVFQK 214
+MEIQVNGG+VA+K VDF FE+ +PI VF++
Sbjct: 175 IMEIQVNGGTVAEKWQPVRPVVRKTMKLPNHTTYKTKLTQVDFVVSLFEQPVPISTVFEE 234
Query: 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 274
+EMID I VTKG G +GVV+R+GVTRLPRKTHRGLRKVACIGAWHPARV F VARAGQ G
Sbjct: 235 NEMIDTIAVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGAWHPARVQFQVARAGQKG 294
Query: 275 YHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVG 334
Y HRTE NKKIY++G + +A T+ D TEK ITPMGGFPHYG+V ED+LL+KGC G
Sbjct: 295 YFHRTERNKKIYRIG-LGRNPRNASTDSDVTEKQITPMGGFPHYGMVREDFLLVKGCIAG 353
Query: 335 PKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+KR +TLR++L+ Q SR+ALE++ LKFIDTSSK+GHGRFQT+ EK K+YG LK
Sbjct: 354 CRKRPITLRKTLVPQVSRVALEKVSLKFIDTSSKWGHGRFQTSLEKQKFYGPLK 407
>gi|449475910|ref|XP_002187558.2| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 407
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/391 (65%), Positives = 315/391 (80%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVKA+PKDDPSKP LTAFLGYKAGMTH VR+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKAWPKDDPSKPVHLTAFLGYKAGMTHTVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTIIETPP+VVVGVVGY++TP+GLR+ TV+A+H+++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIIETPPMVVVGVVGYIETPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ + GK+ ++ MKKYC VIRV+ HTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEAGKRQLEKDFAAMKKYCKVIRVIMHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KVD+ EKQI + +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRIGHGIHVEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D TEK ITP+GGFPHYG VN D+L++KGC VG +KRV+TLR+SLL TSR A
Sbjct: 300 RNNASTHYDITEKTITPLGGFPHYGEVNNDFLMLKGCVVGTRKRVLTLRKSLLVHTSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 HEAIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/410 (61%), Positives = 310/410 (75%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AH Q+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHIQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAK 299
Query: 296 -----------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 409
>gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/410 (61%), Positives = 310/410 (75%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ Y HRTE+NKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKSYFHRTELNKKIYRIGMGLQAQLEVAK 299
Query: 296 -----------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 409
>gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 253/410 (61%), Positives = 310/410 (75%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKK FTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKDFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAK 299
Query: 296 -----------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 409
>gi|367010196|ref|XP_003679599.1| 60S ribosomal protein L3 [Torulaspora delbrueckii]
gi|359747257|emb|CCE90388.1| hypothetical protein TDEL_0B02590 [Torulaspora delbrueckii]
Length = 387
Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 316/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAV++++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D ++ +L ++KKY TV+RVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSGKYAQDGAL--VERELARIKKYATVVRVLAHTQVRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK ES +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDES-NAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF YG VN D++++KG G +KRVVTLR+SL TSR ALEE+ L
Sbjct: 297 NFDRTKKTITPMGGFVAYGNVNNDFVMVKGSIPGTRKRVVTLRKSLYTNTSRKALEEVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Ogataea parapolymorpha DL-1]
Length = 389
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 259/388 (66%), Positives = 315/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKRA + RG+ KAFPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEQPRHGSLGFLPRKRAVKQRGRCKAFPKDVKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKK+AFTKY++KY + +I+ +L ++KKYC+V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKRAFTKYSEKYA--NSAAEIEKELARIKKYCSVVRVLVHTQIRKTP-LTQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGSV+ KVD+A FEK + +D+VF+++EMID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRG RKVACIGAWHP+ V +TVARAGQ GYHHRT +N K+Y++GKA E+ S T
Sbjct: 238 LPRKTHRGTRKVACIGAWHPSHVMWTVARAGQRGYHHRTSINHKVYRIGKAGDEA-SGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITPMGGF YG VN D++L+KG GP KRV+TLR+SL T+R ALE++ L
Sbjct: 297 EFDRTKKTITPMGGFVRYGAVNNDFVLLKGSIPGPVKRVITLRKSLYGPTNRRALEQVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|50411414|ref|XP_457044.1| 60S ribosomal protein L3 [Debaryomyces hansenii CBS767]
gi|74659529|sp|Q6BXM5.1|RL3_DEBHA RecName: Full=60S ribosomal protein L3
gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii CBS767]
Length = 389
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKR++ RG+VK+FPKD SKP LTAFLGYKAGMT +VRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRSANIRGRVKSFPKDVKSKPVALTAFLGYKAGMTTVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRPGSKMHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + ++ +L ++KKY +V+RVLAHTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAQ--VERELARIKKYASVVRVLAHTQIKKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGSV+ KVD+A FEK + +D+VF+KDEM+D+ VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSVSDKVDWAKEHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N K+Y++G A ES S T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDES-SGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG V D++L+KG G KKR+VT+R+SL TSR A E + L
Sbjct: 297 EFDRTKKTINPMGGFVRYGNVKNDFMLLKGSIPGVKKRIVTIRKSLYVDTSRRATENVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>gi|50549253|ref|XP_502097.1| 60S ribosomal protein L3 [Yarrowia lipolytica]
gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica CLIB122]
Length = 387
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/388 (67%), Positives = 311/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKR ++ RGK K+FPKDD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEQPRHGHLGFLPRKRCTKSRGKAKSFPKDDKSKPVALTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GSK+ K+E EA T+++TPP+VVVGVVGYV TPRGLRSL TVWA+HL+EEVRRRFYK
Sbjct: 61 DRRGSKMDKREIVEAATVVDTPPMVVVGVVGYVATPRGLRSLTTVWAEHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKK AFTKY K+YE D + +Q +LE++KKYCTV+RVLAHTQ K+ LKQKKAH
Sbjct: 121 NWYKSKKTAFTKYAKQYEGDAAQ--VQKELERIKKYCTVVRVLAHTQP-KLTPLKQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSVA KV++A FEK + ID VF++DEMID I +TKGKGYEG RWG +
Sbjct: 178 LAEIQINGGSVADKVEWAQQHFEKTVTIDTVFEQDEMIDAIAITKGKGYEGTTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVAR+GQ+GYHHRT N K+Y++GK ES+ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQYTVARSGQDGYHHRTSANHKVYRVGKGGDESNGS-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT K ITPMGGF YG VN D+L++KG G KKRV+TLR+S+ TSR LE+ +L
Sbjct: 297 EFDRTPKTITPMGGFVRYGEVNNDFLILKGSIPGVKKRVITLRKSMWLHTSRRDLEKTQL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKTAFMGTLK 384
>gi|360044569|emb|CCD82117.1| putative 60s ribosomal protein L3 [Schistosoma mansoni]
Length = 419
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/410 (61%), Positives = 314/410 (76%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE +RRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKK+AF K +KK+ + G I+ L+K+KKYCTV+R +AHTQ+R MK +QKK+H
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+QVNGG+V+QKVD+ FEKQI + VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG----------- 289
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIYK+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQAQLEVAK 299
Query: 290 -KASQESH----------SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+AS++ +A TEFD T K+ITPMGGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEASKDEKDKNAVPKPKGNASTEFDLTAKNITPMGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQVKPRSREKIVLKFIDTSSKFGHGRFQTRAEKQATMGPLK 409
>gi|367005320|ref|XP_003687392.1| 60S ribosomal protein L3 [Tetrapisispora phaffii CBS 4417]
gi|357525696|emb|CCE64958.1| hypothetical protein TPHA_0J01360 [Tetrapisispora phaffii CBS 4417]
Length = 387
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 258/388 (66%), Positives = 314/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RGKV+AFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGKVRAFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TP +VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPEIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY + I+ +L ++KKY +V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQEGA--GIERELARIKKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N KIY++GKA E+ SA T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKIYRVGKAGDEA-SAAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF YG VN D++++KG G KKRVVTLR+SL TSR ALEE+ L
Sbjct: 297 NFDRTKKTINPMGGFVQYGNVNNDFIMVKGSIPGTKKRVVTLRKSLYTNTSRKALEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|340503599|gb|EGR30155.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 388
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/388 (64%), Positives = 313/388 (80%), Gaps = 6/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGF PR+R HRG+ +AFP+DD SK LTAF G+KAGMTHI+RDV
Sbjct: 1 MSHRKFEAPRRGSLGFRPRRRTRHHRGRCRAFPRDDASKKSHLTAFTGFKAGMTHILRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSK HKKE EAVT+IE PP+ VVG+VGY+ TPRGLR+LCTVW + L++ +RRFYK
Sbjct: 61 ERPGSKNHKKEVVEAVTVIECPPMTVVGLVGYINTPRGLRALCTVWTKTLDKNTKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFT K+ET+ +K+ + ++KKYCTV+RV+AHT + K+ +QKK H
Sbjct: 121 NWTNSKKKAFT----KHETNFNQKEQDILINRIKKYCTVVRVIAHTNMNKL-NFRQKKNH 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQVNGG+VAQKV+FA G FEK++ +D +FQ++EMID+IGVTKGKG+ GVV R+GV
Sbjct: 176 ILEIQVNGGTVAQKVEFAKGLFEKEVTVDQLFQENEMIDVIGVTKGKGFAGVVKRFGVKH 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L +KTHRG RKV CIGAWHP+R+ FTVARAGQ GYHHRTE+NKK+Y++GK Q++ +A T
Sbjct: 236 LQKKTHRGYRKVGCIGAWHPSRIRFTVARAGQLGYHHRTEINKKVYRVGKGDQKN-NAST 294
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D T+K ITP+GGFPHYGVV D+++IKGCCVGPKKR + LR+SLL T A E+I L
Sbjct: 295 QGDLTDKQITPLGGFPHYGVVKNDFIMIKGCCVGPKKRPLVLRKSLLTNTKGAAKEQINL 354
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT EKAK+YGRL+
Sbjct: 355 KFIDTSSKLGHGRFQTQDEKAKFYGRLE 382
>gi|50311593|ref|XP_455822.1| 60S ribosomal protein L3 [Kluyveromyces lactis NRRL Y-1140]
gi|74660266|sp|Q6CJR7.1|RL3_KLULA RecName: Full=60S ribosomal protein L3
gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis]
Length = 387
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 317/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDQTKPVALTSFLGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPIVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY + + D +L ++KKY +V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAENGAQVD--RELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N K+Y++GK E+++A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR ALEE+ L
Sbjct: 297 EFDRTKKTITPMGGFVHYGAINNDFVILKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFLGTLK 384
>gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni]
Length = 419
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/410 (61%), Positives = 314/410 (76%), Gaps = 23/410 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE +RRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEEFKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKK+AF K +KK+ + G I+ L+K+KKYCTV+R +AHTQ+R MK +QKK+H
Sbjct: 121 DWCKSKKRAFLKSSKKWLCEAGLAQIKRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+QVNGG+V+QKVD+ FEKQI + VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEVQVNGGTVSQKVDWIRQHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG----------- 289
LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIYK+G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYKIGMGLQAQLEVAK 299
Query: 290 -KASQESH----------SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
+AS++ +A TEFD T K+ITPMGGFPHYG V DY++IKGCC+GP+KR
Sbjct: 300 AEASKDDKDKNAVPKPKGNASTEFDLTAKNITPMGGFPHYGEVRNDYVMIKGCCMGPRKR 359
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 360 VITLRKTLIPQVKPRSREKIVLKFIDTSSKFGHGRFQTRAEKQATMGPLK 409
>gi|254579294|ref|XP_002495633.1| 60S ribosomal protein L3 [Zygosaccharomyces rouxii]
gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
Length = 388
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 314/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+ PRHGSLGFLPRKR + RG+VK+FPKDD +KP LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYSAPRHGSLGFLPRKRCASPRGRVKSFPKDDKTKPVGLTSFLGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAV++++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFY+
Sbjct: 61 DRPGSKFHKREVVEAVSVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + I+ +L ++ KY TV+RVLAHTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDAAQ--IERELARINKYATVVRVLAHTQIRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGG+ A KV +A FEK + +D+VF+++EMID+ VTKG GYEGV RWG TR
Sbjct: 178 LAEIQINGGTTADKVAWAKEHFEKTVSVDSVFEQNEMIDVAAVTKGHGYEGVTHRWGTTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP V ++VARAGQNG+HHRT +N KIY++GK E+++A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPNHVMWSVARAGQNGFHHRTSINHKIYRVGKGDDEANAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGFPHYG V D+++IKG G KKRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFPHYGEVKNDFVVIKGAIPGTKKRVVTLRKSLYTDTSRRALEQVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 407
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/391 (64%), Positives = 314/391 (80%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAF+GYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPIHLTAFMGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG ++ K+E EAVTIIETPP+VVVGVVGY+ TP+GLR+ TV+A+H+++E RRRFYK
Sbjct: 61 HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQM-KLLPLRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+K+D+ EKQI + +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKIDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKKI+++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGRGIHVEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D TEK ITP+GGFPHYG VN D+L++KGC VGPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTNYDVTEKSITPLGGFPHYGEVNNDFLMLKGCVVGPKKRVLTLRKSLLVHTRRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 HEAIELKFIDTTSKFGHGCFQTAQEKRAFMG 390
>gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/388 (61%), Positives = 313/388 (80%), Gaps = 7/388 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG GFLP KR+ +HRG+V+++PKDD S+P LTAFLGYKAGMTH +R+V+
Sbjct: 1 SHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDTSRPVHLTAFLGYKAGMTHTLREVQ 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+ G K K+E EAVTIIETPP++V GVVGY++T GLRS T++A+HL++E +RRFY+N
Sbjct: 61 RVGLKQSKREEVEAVTIIETPPVIVFGVVGYIRTVHGLRSFKTLFAEHLSDECKRRFYRN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY++K++ G+K + ++E+MKKYC+VIRV+ HTQ+R + + QKK+H+
Sbjct: 121 WYKSKKKAFTKYSRKWQDQTGRKQLDKEIEQMKKYCSVIRVIVHTQMRLLP-ISQKKSHI 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+Q+NGGS++ KVD+A E+ +P+ AVF +DEMIDIIGV+KG G++GV +RW +L
Sbjct: 180 MEVQLNGGSISDKVDWAREHLERAVPVSAVFCQDEMIDIIGVSKGHGFKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV +T+ARAGQ GYHHRTE+NKKI+++GK
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYHHRTEINKKIFRIGKGVHIQDGKVIR 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D ++K ITPMGGFPHYG VN D++++KGC VGPKKR++TLR+SLL TSR +
Sbjct: 300 NNASTSYDTSQKTITPMGGFPHYGEVNNDFVMVKGCVVGPKKRLLTLRKSLLVHTSRKSR 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
E I+LKFIDT+SKFGHGRFQT QEK Y
Sbjct: 360 EAIELKFIDTTSKFGHGRFQTAQEKRAY 387
>gi|449269423|gb|EMC80192.1| 60S ribosomal protein L3-like protein, partial [Columba livia]
Length = 407
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/390 (65%), Positives = 313/390 (80%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAFLGYKAGMTH VR+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFLGYKAGMTHTVREVH 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG KL K+E EAVTIIETPP+VVVGVVGYV+TP+GLR+ TV+A+H+++E RRRFYKN
Sbjct: 62 RPGLKLSKREEVEAVTIIETPPMVVVGVVGYVETPKGLRNFKTVFAEHISDECRRRFYKN 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ +DGK+ ++ MKKYC VIRV+ HTQ+ K+ L+QKKAH+
Sbjct: 122 WHKSKKKAFTKYCKKWQDEDGKRQLEKDFAAMKKYCKVIRVIVHTQM-KLLPLRQKKAHV 180
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+V +KVD+ EKQ+ + +VF ++EMID+IGVTKG G +GV +RW +L
Sbjct: 181 MEIQLNGGTVPEKVDWVRERLEKQVSVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHTKKL 240
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHGIHVEDGKVVK 300
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D TEK ITP+GGFPHYG VN D+L++KGC VG KKRV+TLR+SLL TSR A
Sbjct: 301 NNASTHYDVTEKTITPLGGFPHYGEVNNDFLMLKGCVVGTKKRVLTLRKSLLVHTSRRAQ 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 361 ENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1]
Length = 378
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/375 (64%), Positives = 305/375 (81%), Gaps = 3/375 (0%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+ +LPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 1 MAYLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKEIV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
EAVTI++TPP++VVG+VGY++TPRGLRSL TVWA+HL++E++RRFYKNW KSKKKAFTKY
Sbjct: 61 EAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKY 120
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
KK+ ++G I +LE++KKYCTV+RVLAHTQIRK LKQKKAHLMEIQVNGGS+A
Sbjct: 121 AKKHSENNG-ASITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSIAD 178
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV F FEK + + ++F++DEMID++ VTKG G+ GV RWG +LPRKTH+GLRKVA
Sbjct: 179 KVSFGQELFEKPVDVSSIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLPRKTHKGLRKVA 238
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
CIGAWHP+ V +TVARAGQ GYHHRT +N KIY++GK + ++A TE D T+K ITP+G
Sbjct: 239 CIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDADDNAA-TEIDVTKKTITPLG 297
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGR 373
GF YG V D++++KG G KKRV+TLR+++ QTSR ALE++ LK+IDTSS+FGHG
Sbjct: 298 GFVRYGEVKNDFVMLKGSIPGVKKRVMTLRKTMFPQTSRRALEKVSLKWIDTSSEFGHGA 357
Query: 374 FQTTQEKAKYYGRLK 388
FQT EK +Y G LK
Sbjct: 358 FQTPAEKKQYQGTLK 372
>gi|448083090|ref|XP_004195305.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
gi|359376727|emb|CCE87309.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
Length = 389
Score = 514 bits (1324), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 313/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPPLVVVGVVGYV+TPRGLRSL TVWA+HL+EEV+RRFYK
Sbjct: 61 DRPGSKVHKREIVEAATVVDTPPLVVVGVVGYVETPRGLRSLTTVWAEHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + ++ +L ++KKY +V+RVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS++ KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N K+Y++G ES+ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGEDESNGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG V D++L+KG G +KRV+TLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGEVKNDFVLLKGSIPGVRKRVITLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|403220923|dbj|BAM39056.1| ribosomal protein L3 [Theileria orientalis strain Shintoku]
Length = 419
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/424 (59%), Positives = 315/424 (74%), Gaps = 41/424 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLP+KR+ HR K+++FPKDD S P LTAF GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDVSAPPHLTAFAGYKAGMTHVVTEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EAVTI+ETPP+VVVG+VGYV+TP+GL+ L TVWA HL++EVRRRFYK
Sbjct: 61 DKPGSKLHKKEVVEAVTIVETPPMVVVGLVGYVETPKGLKVLGTVWAGHLSDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K+K+KAFTKY K++ + ++ +L +++ Y TV+R L HTQ K L +KAH
Sbjct: 121 NWYKAKRKAFTKYAKRF----AETKMENELSRLRNYATVVRALMHTQPSKT-SLSLRKAH 175
Query: 181 LMEIQVNGGS-----------------------------------VAQKVDFAYGFFEKQ 205
L+E+QVNGG+ V KV+F FEK
Sbjct: 176 LLEVQVNGGTTEDKVRMRIQWATMSIDDSYFPVSGLMLIKHNSCIVDDKVNFVVNLFEKT 235
Query: 206 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 265
+P+ AVF ++EM+D++GVTKG G +GVV R+GVTRLPRKTHRGLRKVACIG+WHPARV F
Sbjct: 236 VPVSAVFSENEMLDVVGVTKGHGVKGVVARFGVTRLPRKTHRGLRKVACIGSWHPARVQF 295
Query: 266 TVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDY 325
V R GQ GYH RTE NKKIY+LG S + + T+ D TEK ITPMGGFPHYGVV ED+
Sbjct: 296 QVPRHGQMGYHKRTERNKKIYRLGSGSCPRNGS-TDSDLTEKTITPMGGFPHYGVVREDF 354
Query: 326 LLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
L++KGC VG KKRV+TLR++L+ QTSR+AL +++L+FIDTSSK+GHGRFQT +EKA++YG
Sbjct: 355 LMLKGCVVGTKKRVLTLRKTLVPQTSRVALAQVQLRFIDTSSKWGHGRFQTQEEKARFYG 414
Query: 386 RLKA 389
LK+
Sbjct: 415 PLKS 418
>gi|50755665|ref|XP_414843.1| PREDICTED: ribosomal protein L3-like [Gallus gallus]
Length = 407
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/391 (64%), Positives = 312/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KF PRHG LGFLP KR+ RHRGKVK +PKDDPSKP LTAF+GYKAGMTH +R+V
Sbjct: 1 MSHHKFSAPRHGHLGFLPHKRSRRHRGKVKTWPKDDPSKPVHLTAFMGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG ++ K+E EAVTIIETPP+VVVGVVGY+ TP+GLR+ TV+A+H+++E RRRFYK
Sbjct: 61 HRPGLRISKREEVEAVTIIETPPMVVVGVVGYIDTPKGLRNFKTVFAEHISDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+ HTQ+ K+ L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFAAMKKYCKVIRVIMHTQM-KLLPLRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KVD+ EKQI + +VF ++EMID+IGVTKG G +GV +RW +
Sbjct: 180 VMEIQLNGGTVAEKVDWVRERLEKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++VARAGQ GYHHRTE+NKKI+++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYSVARAGQKGYHHRTELNKKIFRIGHGIHVEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D TEK ITP+GGFPHYG VN D+L++KGC VGPKKRV+TLR+SLL T R A
Sbjct: 300 KNNASTNYDVTEKTITPLGGFPHYGEVNNDFLMLKGCVVGPKKRVLTLRKSLLVHTRRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 HEAIELKFIDTTSKFGHGCFQTAQEKRAFMG 390
>gi|443922217|gb|ELU41693.1| 60S ribosomal protein L3 [Rhizoctonia solani AG-1 IA]
Length = 381
Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/355 (67%), Positives = 298/355 (83%), Gaps = 3/355 (0%)
Query: 34 KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV 93
+DDP KP LTA +GYKAGMTHIVRD+++PGSK+HK+E EAV+IIETPPL+VVGVVGYV
Sbjct: 27 QDDPKKPVHLTATMGYKAGMTHIVRDLDRPGSKMHKREVVEAVSIIETPPLIVVGVVGYV 86
Query: 94 KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
+TPRGLR+L TVWA HL++EV+RRFYKNW +SKKKAFT+Y KK ++G K Q +LE++
Sbjct: 87 ETPRGLRTLTTVWANHLSDEVKRRFYKNWYRSKKKAFTRYAKK-AAENGGKSTQRELERI 145
Query: 154 KKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 213
KKYCTV+RVLAHTQIRK GLKQKKAHLMEIQVNGGS+A KV FA+G FEK + + VF+
Sbjct: 146 KKYCTVVRVLAHTQIRKT-GLKQKKAHLMEIQVNGGSIADKVAFAHGLFEKPVEVSTVFE 204
Query: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 273
+DE++D+I VTKG G+EGV RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+
Sbjct: 205 QDEVVDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQD 264
Query: 274 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCV 333
GYHHRTE+NKKIY++G S ++ +A T+ D T+K ITP+GGFPHYG+V DYL++KG
Sbjct: 265 GYHHRTELNKKIYRIGLGS-DAANARTDSDATDKSITPLGGFPHYGIVKNDYLMLKGSIP 323
Query: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
G KKRV+T+R+SL+ TSR LE+++LKFIDTSSKFGHG FQT EK+ + G LK
Sbjct: 324 GTKKRVITIRKSLMVHTSRRDLEKVQLKFIDTSSKFGHGAFQTKAEKSAFLGTLK 378
>gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792), partial [Homo sapiens]
Length = 374
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/365 (66%), Positives = 304/365 (83%), Gaps = 7/365 (1%)
Query: 30 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
K+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP+VVVG+
Sbjct: 1 KSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGI 60
Query: 90 VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++
Sbjct: 61 VGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 120
Query: 150 LEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPID 209
MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++
Sbjct: 121 FSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVN 179
Query: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 269
VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VAR
Sbjct: 180 QVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVAR 239
Query: 270 AGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNE 323
AGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V
Sbjct: 240 AGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTN 299
Query: 324 DYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK +
Sbjct: 300 DFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAF 359
Query: 384 YGRLK 388
G LK
Sbjct: 360 MGPLK 364
>gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
Length = 386
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 248/388 (63%), Positives = 301/388 (77%), Gaps = 7/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TIIE P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILSTVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS+KKAFTK E L++++KYCTV+R + HTQ K L+ KKAH
Sbjct: 121 NWYKSEKKAFTKSLNVPEATK-----NCLLKRIEKYCTVLRAICHTQPSKTP-LRMKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGGS+ +K++F EK +P+ VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F + R GQ GY HRTE NKKIY++G + +SA T
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQIPRHGQKGYFHRTERNKKIYRIG-LKTDKNSAST 293
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVVNED+LL+KGC G KKR +TLR++++ Q SR AL ++ L
Sbjct: 294 DADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRPITLRKNIVPQVSRDALAQVSL 353
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT++EK KYYG LK
Sbjct: 354 KFIDTSSKIGHGRFQTSEEKVKYYGPLK 381
>gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 389
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/388 (64%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKFE PRHGSLGFLP+KR H G++++FP+DD ++ LTAF GYKAGMTH+VR V+
Sbjct: 1 SHRKFEAPRHGSLGFLPKKRTKYHSGRIRSFPRDDAAEQPHLTAFRGYKAGMTHVVRGVD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG+ +HK+E +AV+I+ETPP+VVVGVVGYV+TP GLR+L TV+ +HL+EE +RR YKN
Sbjct: 61 RPGALMHKREVVDAVSIVETPPMVVVGVVGYVETPSGLRTLTTVFTEHLSEEFKRRCYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W SKKKA+TKY KY+ D G KDI+ +LE++KK+C+V+RV+AH+Q++K+ L+ KKAH+
Sbjct: 121 WYNSKKKAYTKYALKYQKDGG-KDIENELERIKKFCSVVRVIAHSQVKKL-NLRIKKAHI 178
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG A KVDFA FEK++ +D++F KDE ID++GVT+G GYEGV TRWGV+RL
Sbjct: 179 MEIQVNGGDTAAKVDFAKNLFEKEVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRL 238
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
PRKTHRGLRKVACIG+WHPARVS TV RAGQNGY HRTEMNKK+Y++GK E+ S T+
Sbjct: 239 PRKTHRGLRKVACIGSWHPARVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEA-SCQTD 297
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
D T+K ITPMGGF HYG V ED+L++KG VG KKR + LR+SL+K +SR LE+I +K
Sbjct: 298 ADLTKKSITPMGGFVHYGEVKEDWLMLKGAIVGVKKRPLILRKSLMKHSSRKHLEKIDIK 357
Query: 362 FIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
FIDTSSK GHGRFQT +EKAK+ G L +
Sbjct: 358 FIDTSSKLGHGRFQTAEEKAKFLGPLAS 385
>gi|449017686|dbj|BAM81088.1| 60S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
Length = 390
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/390 (62%), Positives = 312/390 (80%), Gaps = 8/390 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD-PSKPCRLTAFLGYKAGMTHIVRD 59
MSHRK+E PRHGSLGFLPR R RHRG+V+++P+D P+ P LTAF KAG TH+VR
Sbjct: 1 MSHRKYEAPRHGSLGFLPRGRTKRHRGRVRSWPRDPGPAVPPHLTAFPVVKAGCTHVVRQ 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+++PGSK+HKKE E VTI+E PP+V+ G+VGY +TPRGLR++ TV+A+HLN+EV+RRFY
Sbjct: 61 IDRPGSKVHKKEVAEPVTILEAPPIVICGIVGYSETPRGLRAIRTVFAEHLNDEVKRRFY 120
Query: 120 KNWCKSKKKAFTKYT-KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
KNW ++KKKAFTKY KY + + D L+ ++++C+V+RV+AHTQ RK + L+QKK
Sbjct: 121 KNWYRAKKKAFTKYALAKYSMGEYRND----LDTIRRHCSVVRVIAHTQQRKFR-LRQKK 175
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH++EIQ+NGG++ +KVDFA EK + ID V DEM+D IGVT+GKG+EGVVTR+GV
Sbjct: 176 AHILEIQINGGTIPEKVDFAERLLEKTVSIDDVISNDEMVDTIGVTRGKGFEGVVTRFGV 235
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
RLPRKTHRGLRKVACIGAWHPARV FTV RAGQ GYHHRT+MN K+Y++GK + SA
Sbjct: 236 RRLPRKTHRGLRKVACIGAWHPARVQFTVPRAGQRGYHHRTQMNLKVYRIGKKG-DGKSA 294
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE+D TEK ITP+GGFPHYGV+ ED+++++G GPKKR + LR+SL Q SR A E+I
Sbjct: 295 TTEYDLTEKGITPLGGFPHYGVIREDWVMLRGAVQGPKKRPIILRKSLFPQISRRAQEKI 354
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+LKFIDTSSK+GHGRFQT EKA+Y G LK
Sbjct: 355 ELKFIDTSSKWGHGRFQTAAEKARYMGVLK 384
>gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 237/395 (60%), Positives = 313/395 (79%), Gaps = 8/395 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSL FLP+KR +R RG++K+FPKDD SKP LTAF+G+KAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSLKFLPKKRCTRPRGQIKSFPKDDASKPIHLTAFMGFKAGMTHVVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGS ++KKE EAVTI+ETPPL V+G+ GY++TP G RS+ TVWA H+++E +RRFY+
Sbjct: 61 EKPGSAINKKEVVEAVTIVETPPLKVIGLTGYIETPDGPRSIKTVWANHISDEAKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W SKKKAFTK +K++E++DGKK I+ + +KKY +R + HTQ++ + L+QKKAH
Sbjct: 121 SWYSSKKKAFTKASKRWESEDGKKSIERDIAMIKKYSKNVRAICHTQMKGL-SLRQKKAH 179
Query: 181 LMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++EIQ+NGG+ +A KVD+A FEK++ ++ VF + EMID+IG+TKG+GY GV +RW
Sbjct: 180 IIEIQINGGNGIADKVDWATSNFEKEVSVNTVFSEAEMIDVIGITKGRGYHGVTSRWHTK 239
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG------KASQ 293
+LPRKTH+GLRKVACIGAWHP+RV+F+VAR+GQ GYHHRTE+NKK+Y++G +
Sbjct: 240 KLPRKTHKGLRKVACIGAWHPSRVAFSVARSGQKGYHHRTEINKKVYRVGAGFHTVDGKE 299
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
++A TE D T+K I P+GGF YG+V D+++IKG GPKKR +TLRQSLLKQTSR
Sbjct: 300 VKNNASTEADITDKSINPVGGFVQYGLVKSDFVMIKGGICGPKKRAITLRQSLLKQTSRA 359
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
ALE +KLKFIDT+SK GHGRFQT +EK + G LK
Sbjct: 360 ALEPVKLKFIDTTSKQGHGRFQTIEEKRAFMGPLK 394
>gi|365989292|ref|XP_003671476.1| ribosomal protein L3 [Naumovozyma dairenensis CBS 421]
gi|343770249|emb|CCD26233.1| hypothetical protein NDAI_0H00590 [Naumovozyma dairenensis CBS 421]
Length = 387
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 311/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEQPRHGHLGFLPRKRAVSIRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAV++++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVSVVDTPALVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D +I+ +L ++ KY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--EIERELARISKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+A+KV +A FEK + +D+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSIAEKVQWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK ES+ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRVGKGEDESNGS-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF YG V D++++KG G +KRVVTLR+SL TSR A+EE+ L
Sbjct: 297 SFDRTKKTITPMGGFVSYGEVKNDFVMVKGSIPGTRKRVVTLRKSLYTNTSRKAVEEVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTAAEKHAFMGTLK 384
>gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia]
gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 238/384 (61%), Positives = 303/384 (78%), Gaps = 5/384 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGF PRKR HRG+++AFPKD+ S P LTAF G+KAGMTHI+R V
Sbjct: 1 MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNKSSPVHLTAFAGFKAGMTHILRTV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSKL+ KE EAVTI+ETPPL VVG+VGY++TPRGLR+L TVW+ + ++ RRFYK
Sbjct: 61 ERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFT Y K + K+++ QL+++ KYC V+RV+ HTQ+ K+ L+QKK H
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL-NLRQKKNH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E+QVNGG+ QKV++A G EK++ +D VF+++E ID++GVTKGKG GV+ R+GV
Sbjct: 177 VFEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVKH 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+ + ++A T
Sbjct: 237 LQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AAGDKNTAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITP+GGFPHYG + D+L++KG VGPKKRVV LR+SL+ QTSR ALEEI L
Sbjct: 296 EADLTSKAITPLGGFPHYGEIRNDFLMLKGGIVGPKKRVVLLRKSLVPQTSRKALEEITL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYY 384
KF+DTSSK GHGRFQT +EKAK+Y
Sbjct: 356 KFVDTSSKIGHGRFQTQEEKAKFY 379
>gi|406701331|gb|EKD04480.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
CBS 8904]
Length = 388
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/388 (62%), Positives = 317/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PR GSL FLPRKRA++HRG +K+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT++ETPP+V+VGVVGYV+TPRGLR+L TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ ++G + +LE++KKY TV+RVLAHTQ+ + GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQT-GLAQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KV+FA FEK + +VF+++E ID+I VTKG GY GV++RWGVT+
Sbjct: 179 LSEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N KIY++ + E S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+K I P+GG+ HY ++ D++++KG G KKRV+TLR++L TSR LEEI L
Sbjct: 298 EFDLTKKSINPVGGWSHYPLIRNDFVMLKGSIPGVKKRVITLRKALRVHTSRTHLEEITL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSS+ GH ++Q+ +EKA++ G+LK
Sbjct: 358 KFIDTSSQLGHTQWQSLEEKAQFLGQLK 385
>gi|385305996|gb|EIF49936.1| 60s ribosomal protein l3 [Dekkera bruxellensis AWRI1499]
Length = 389
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 249/388 (64%), Positives = 311/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKRAS+ RG ++AFPKDD +KP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKFSEPRHGSLGFLPRKRASQQRGHIRAFPKDDKTKPVHLTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGS +HK+E EA T+++TP LVVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 NRPGSNVHKREIVEAATVVDTPELVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKK+AF KY++KY +G DI+ +L ++KKYC+V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKRAFAKYSEKYA--NGAADIETELARVKKYCSVVRVLVHTQIRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV+ KVD+A FEK +P+D VF++DE +D+I VT+G GYEGV R+G T+
Sbjct: 178 LAEIQLNGGSVSDKVDWAKEHFEKTVPVDTVFEQDESVDVIAVTRGHGYEGVTHRYGTTK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRG RKVACIG WHP+ V++ VAR+GQNGYHHRT +N K+Y++GKA E+ S T
Sbjct: 238 LPRKTHRGARKVACIGPWHPSHVNWAVARSGQNGYHHRTSVNNKVYRVGKAGDEA-SGST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+FDRT+K I P+GGF YG V D++L+KG GP KR++TLR++L T+R ALE++ L
Sbjct: 297 DFDRTKKTINPLGGFVKYGEVKNDFVLLKGSIPGPVKRIITLRKALHHPTNRKALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDTSS FG GRFQT EK + G LK
Sbjct: 357 KWIDTSSNFGKGRFQTAAEKHAFLGTLK 384
>gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407]
Length = 442
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/370 (65%), Positives = 299/370 (80%), Gaps = 3/370 (0%)
Query: 19 RKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTI 78
RKR++ HRG+VK+FPKDDP KP LTA LGYKAGMT IVRD+++PG+K HKKE EAVTI
Sbjct: 69 RKRSASHRGRVKSFPKDDPKKPVHLTATLGYKAGMTTIVRDLDRPGAKSHKKEVVEAVTI 128
Query: 79 IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
++TPP++VVG+VGY++TPRGLRSL TVWA+HL +E++RRFYKNW KSKKKAFTKY KK+
Sbjct: 129 VDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLGDELKRRFYKNWYKSKKKAFTKYAKKHS 188
Query: 139 TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 198
G I ++E++KKYCTV+RVLAHTQIRK LKQKKAHLMEIQ+NGGS A KV+F
Sbjct: 189 ESKG-VSITREIERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSTADKVEFG 246
Query: 199 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 258
G FEK +D++F++DE+ID+I VTKG G+EGV RWG +LPRKTH+GLRKVACIGAW
Sbjct: 247 QGLFEKPFSVDSIFEQDEVIDVIAVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAW 306
Query: 259 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHY 318
HPA V +TVARAGQ GYHHRT +N KIY++GK + + A T+ D T+K ITP+GGF Y
Sbjct: 307 HPAHVQWTVARAGQRGYHHRTSVNHKIYRIGKGGSDDN-ASTDLDVTKKTITPLGGFVRY 365
Query: 319 GVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQ 378
G +N D++++KG G KKRVVTLR+SL TSR ALE++ LK+IDTSS+FGHG FQT Q
Sbjct: 366 GEINNDFVMVKGSIPGTKKRVVTLRKSLFTHTSRKALEKVTLKWIDTSSEFGHGAFQTKQ 425
Query: 379 EKAKYYGRLK 388
EK ++ G LK
Sbjct: 426 EKTQFQGTLK 435
>gi|363751473|ref|XP_003645953.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889588|gb|AET39136.1| hypothetical protein Ecym_4055 [Eremothecium cymbalariae
DBVPG#7215]
Length = 387
Score = 509 bits (1310), Expect = e-141, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 319/388 (82%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+++++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D ++ +L +MKKY TVIRVLAHTQIRK L QK+AH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDG--TAVEKELARMKKYATVIRVLAHTQIRKTP-LAQKRAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++GK E ++A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEGNAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITPMGGF HYG VN D++++KG G +KRVVTLR+SL TSR A+EE+ L
Sbjct: 297 EFDRTKKTITPMGGFVHYGAVNNDFVMVKGSIPGTRKRVVTLRKSLYTNTSRKAIEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva]
Length = 384
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/389 (63%), Positives = 313/389 (80%), Gaps = 6/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLP+KR+ HR K+++FP DDP+KP LTAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPSDDPAKPPHLTAFVGYKAGMTHVVTEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKLHKKE EAVT++ETPP+V VG+VGYV+TPRGL+ L TVWA HL++E+RRRFYK
Sbjct: 61 DRPGSKLHKKEVVEAVTVVETPPMVCVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ + ++ +L++++ Y TV+R L HTQ K L +KAH
Sbjct: 121 NWYKSKKKAFTKYAKKF----AETGMEQELKRIRNYATVVRALMHTQPSKTS-LSLRKAH 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+E+QVNGG+ +KV + G FEK +P+ VF ++EM+D++GVTKG G +GVV+R+GVTR
Sbjct: 176 LLEVQVNGGTTDEKVSYVVGLFEKSVPVSTVFGENEMLDVLGVTKGHGVKGVVSRYGVTR 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG+WHPARV F V R GQ GYH RTE NKKIY+LG S + + T
Sbjct: 236 LPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYHKRTERNKKIYRLGLGSS-ARNGST 294
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVV ED+L++KGC G +KRV+TLR++L+ QTSR AL E+ L
Sbjct: 295 DSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPGTRKRVITLRKTLVPQTSRHALAEVNL 354
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSK+GHGRFQT++EK +YG LK+
Sbjct: 355 KFIDTSSKWGHGRFQTSEEKKSFYGPLKS 383
>gi|254572870|ref|XP_002493544.1| 60S ribosomal protein L3 [Komagataella pastoris GS115]
gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Komagataella pastoris CBS 7435]
Length = 388
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/388 (64%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLP+KRAS R + KAFPKDD SKP LTAF+GYKAGM+ IVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPKKRASSPRARCKAFPKDDKSKPVALTAFMGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAV+I++TPPLVVVGVVGYV+T GL+SL TVWA+HL+++VRRRFYK
Sbjct: 61 DRPGSKMHKREVVEAVSIVDTPPLVVVGVVGYVETTSGLKSLTTVWAEHLSDDVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKK AF+KY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QK+AH
Sbjct: 121 NWYKSKKVAFSKYSAKYANDPA--SIETELARIKKYASVVRVLVHTQIRKTP-LNQKRAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FE+ I +D VF+++E ID+I VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSISEKVDWARDHFEQTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNG+HHRT +N KIY++GK ES+ + T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESNGS-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+DRT+K +TP+GGF YG + D+++IKG GP KRVVTLR+SL QTSR A E++ L
Sbjct: 297 EYDRTKKTVTPLGGFVRYGEIRNDFVMIKGSIPGPVKRVVTLRKSLYTQTSRKATEQVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EKA + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKAAFLGTLK 384
>gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 444
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 251/391 (64%), Positives = 311/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 38 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 97
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 98 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 157
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q L MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 158 DWHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 216
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 217 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 276
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ +
Sbjct: 277 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVV 336
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 337 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 396
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 397 LENIELKFIDTTSKFGHGRFQTAQEKRVFMG 427
>gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
Length = 383
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/374 (64%), Positives = 299/374 (79%), Gaps = 3/374 (0%)
Query: 15 GFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCE 74
LP S V +FPKDDP KP LTA +GYKAGMT VRD+E+PG+K+HKKE E
Sbjct: 6 ALLPSCHGSAVPDTVASFPKDDPKKPVHLTAAMGYKAGMTTTVRDLERPGAKMHKKEIVE 65
Query: 75 AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYT 134
AVT++ETPP++ VGVVGY++TPRGLRSL TVWA+HL++E++RRFYKNW KSKKKAFTKY
Sbjct: 66 AVTVVETPPMIAVGVVGYIETPRGLRSLTTVWAEHLSDEIKRRFYKNWYKSKKKAFTKYA 125
Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQK 194
K Y + G + +LE++KKYCTV+R+LAHTQIRK LKQKKAHLMEIQVNGGS+A K
Sbjct: 126 KNYSENKGA-SVTRELERIKKYCTVVRLLAHTQIRKTP-LKQKKAHLMEIQVNGGSIADK 183
Query: 195 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVAC 254
V+FA+G FEK I ID++F++DEMID+I VTKG G++GV +RWG +LPRKTH+GLRKVAC
Sbjct: 184 VEFAHGLFEKPIEIDSIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLPRKTHKGLRKVAC 243
Query: 255 IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGG 314
IGAWHP+ V +TVARAGQ+GYHHRT +N KIY++GK S E +A T+FD ++K ITPMGG
Sbjct: 244 IGAWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEG-NASTDFDVSKKQITPMGG 302
Query: 315 FPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRF 374
F YG V D+L+IKG C G KKRV+TLR++L Q SR ALE+++LK+IDTSSKFGHG +
Sbjct: 303 FVRYGEVKNDFLIIKGSCPGVKKRVLTLRKTLYPQVSRKALEKVELKWIDTSSKFGHGAY 362
Query: 375 QTTQEKAKYYGRLK 388
QT EK + G LK
Sbjct: 363 QTPAEKRAFMGTLK 376
>gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H]
gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H]
Length = 386
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/388 (64%), Positives = 299/388 (77%), Gaps = 7/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TI+E P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS KKAFTK K ++ ++++KYCTV+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTKALMV-----PKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LSMKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG + K+DF EK +P+ VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKDKIDFLKELMEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G ++ ++A T
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNAST 293
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVVNED++L+KGC G KKR +TLR++L+ Q SR AL EI L
Sbjct: 294 DADITEKKITPMGGFPHYGVVNEDFILLKGCVAGTKKRPITLRKTLVPQVSRDALAEISL 353
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT++EK KYYG LK
Sbjct: 354 KFIDTSSKIGHGRFQTSEEKTKYYGPLK 381
>gi|255717332|ref|XP_002554947.1| 60S ribosomal protein L3 [Lachancea thermotolerans]
gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans CBS 6340]
Length = 388
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/388 (64%), Positives = 310/388 (79%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RGKV++FPKDD SK LT+FLGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGKVRSFPKDDKSKSVALTSFLGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPMVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++ KY TV+RVLAHTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGAA--IERELARISKYATVVRVLAHTQVRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS A KV +A FEK + +D+VF+++EMID+ VTKG G+EGV RWG +
Sbjct: 178 LAEIQINGGSTADKVAWAREHFEKTVSVDSVFEQNEMIDVCAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ G+H RT +N K+Y++GK E +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGFHTRTSINHKVYRVGKGGDEG-NAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITPMGGF YG VN D++++KGC G +KRVVTLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKSITPMGGFVQYGPVNNDFVMVKGCIPGNRKRVVTLRKSLYTNTSRKALEQVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|389582750|dbj|GAB65487.1| ribosomal protein L3 [Plasmodium cynomolgi strain B]
Length = 386
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 249/388 (64%), Positives = 300/388 (77%), Gaps = 7/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TIIE P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRVLTTVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS KKAFTK K ++ ++++KYCTV+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTKALMV-----PKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LTMKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG + +K+DF EK +P+ VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKEKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G ++ ++A T
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNAST 293
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVVNED++L+KGC G KKR +TLR++L+ Q SR AL +I L
Sbjct: 294 DADITEKKITPMGGFPHYGVVNEDFILLKGCVAGTKKRPITLRKTLVPQVSRDALAQISL 353
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT++EK KYYG LK
Sbjct: 354 KFIDTSSKIGHGRFQTSEEKIKYYGPLK 381
>gi|345317852|ref|XP_001514408.2| PREDICTED: 60S ribosomal protein L3 [Ornithorhynchus anatinus]
Length = 378
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 238/364 (65%), Positives = 302/364 (82%), Gaps = 7/364 (1%)
Query: 31 AFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVV 90
AF +DDP+KP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP+V+VG+V
Sbjct: 6 AFYQDDPTKPIHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIV 65
Query: 91 GYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQL 150
GYV+TPRGLR+ T++A+H+++E +RRFYKNW KSKKKAFTKY KK++ ++GKK ++
Sbjct: 66 GYVQTPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDF 125
Query: 151 EKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDA 210
MKKYC VIRV+AHTQ+R + L+QKK+HLMEIQVNGGS+A+KVD+A E+Q+P+
Sbjct: 126 NSMKKYCQVIRVIAHTQMRVLP-LRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVAT 184
Query: 211 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARA 270
VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARA
Sbjct: 185 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARA 244
Query: 271 GQNGYHHRTEMNKKIYKLGKASQ------ESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
GQ GYHHRTE+NKKIYK+G+ Q ++A T++D ++K I P+GGF HYG V D
Sbjct: 245 GQKGYHHRTEINKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTND 304
Query: 325 YLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYY 384
++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK +
Sbjct: 305 FVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFM 364
Query: 385 GRLK 388
G LK
Sbjct: 365 GPLK 368
>gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax Sal-1]
gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax]
Length = 386
Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/388 (63%), Positives = 299/388 (77%), Gaps = 7/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKDD KP TAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDDKEKPPHFTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TIIE P+VVVG+VGY +TP+GLR L TVWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRILTTVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS KKAFTK K ++ ++++KYCTV+R + HTQ K L KKAH
Sbjct: 121 NWYKSDKKAFTKALMV-----PKLTKESLYKRIEKYCTVLRAVCHTQPSKTP-LSMKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG + K+DF EK +P+ VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGGMKDKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G ++ ++A T
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNAST 293
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVVNED++L+KGC G KKR +TLR++L+ Q SR AL ++ L
Sbjct: 294 DADITEKKITPMGGFPHYGVVNEDFILLKGCVAGTKKRPITLRKTLVPQVSRDALAQVSL 353
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT++EK KYYG LK
Sbjct: 354 KFIDTSSKIGHGRFQTSEEKVKYYGPLK 381
>gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus]
gi|88932612|sp|Q3SZ10.3|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like
gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus]
gi|296473512|tpg|DAA15627.1| TPA: 60S ribosomal protein L3-like [Bos taurus]
Length = 407
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 310/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGG+VA+KV +A EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|351711301|gb|EHB14220.1| 60S ribosomal protein L3-like protein [Heterocephalus glaber]
Length = 407
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 309/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++++HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFSEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWYKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN DY+++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNAATSYDVTDKSITPLGGFPHYGEVNNDYIMLKGCIAGTKKRVITLRKSLLLHHSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|334333850|ref|XP_001366065.2| PREDICTED: 60S ribosomal protein L3-like [Monodelphis domestica]
Length = 431
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/391 (62%), Positives = 310/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHG LGFLP+KR+ RHRGKVK +P+DDPSKP LTAFLGYKAGMTH +R+V
Sbjct: 24 ISHRKFSAPRHGHLGFLPQKRSRRHRGKVKTWPRDDPSKPVHLTAFLGYKAGMTHTLREV 83
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPP++VVG+VGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 84 HRPGLKISKREEVEAVTIVETPPVIVVGIVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 143
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +K+ DDGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 144 NWYKSKKKAFTKACQKWRDDDGKKRLQKDFASMKKYCKVIRVIVHTQM-KLLPFRQKKAH 202
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG++A+KV++A EKQ+ + VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 203 IMEIQLNGGTIAEKVEWARARLEKQVSVHTVFSQSEVIDVIAVTKGRGMKGVTSRWHAKK 262
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 263 LPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHGIHVKDGKVV 322
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 323 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHRSRRA 382
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 383 LENIELKFIDTTSKFGHGRFQTAEEKRAFMG 413
>gi|410985373|ref|XP_003998997.1| PREDICTED: 60S ribosomal protein L3-like [Felis catus]
Length = 407
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 310/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+SRHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W +SKKKAFTK K++ +GKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHRSKKKAFTKACKRWRDAEGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHTEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 RNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRVFMG 390
>gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca]
Length = 407
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/390 (64%), Positives = 310/390 (79%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ DGKK +Q L MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQRDLAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 180
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 181 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 240
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ +
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVK 300
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR AL
Sbjct: 301 NNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAL 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 361 ENIELKFIDTTSKFGHGRFQTAQEKRVFMG 390
>gi|348584788|ref|XP_003478154.1| PREDICTED: 60S ribosomal protein L3-like [Cavia porcellus]
Length = 417
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/390 (64%), Positives = 308/390 (78%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 12 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 71
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 72 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVTTPRGLRSFKTIFAEHLSDECRRRFYKD 131
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 132 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 190
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 191 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 250
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 251 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 310
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T+K ITP+GGFPHYG VN DY+++KGC G KKRV+TLR+SLL SR AL
Sbjct: 311 NNASTSYDVTDKSITPLGGFPHYGEVNNDYIMLKGCIAGTKKRVITLRKSLLVHHSRRAL 370
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 371 ENIELKFIDTTSKFGHGRFQTAQEKRAFMG 400
>gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 407
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 312/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS TV+A+HL++E RRRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHLSDECRRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W +SKKKAFTK +++ DGK+ +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHRSKKKAFTKACRRWRDADGKRQLQRDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES--- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ SQ+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHSQDGKMV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|410078898|ref|XP_003957030.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
gi|372463615|emb|CCF57895.1| hypothetical protein KAFR_0D02480 [Kazachstania africana CBS 2517]
Length = 387
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 314/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDQSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++ P +VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDAPAVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L +++KY TVIRVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSTKYAQDGAA--IEKELARLRKYATVIRVLVHTQVRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++K+D+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKIDWAREHFEKTVSVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQNGYHHRT +N KIY++GK E+ +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQNGYHHRTSINHKIYRIGKGDDEA-NAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTITPMGGFVHYGPINNDFVMLKGSIPGTRKRVVTLRKSLYTNTSRKALEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|401882459|gb|EJT46717.1| large subunit ribosomal protein L3 [Trichosporon asahii var. asahii
CBS 2479]
Length = 381
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 241/383 (62%), Positives = 312/383 (81%), Gaps = 3/383 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PR GSL FLPRKRA++HRG +K+FPKDDP KP LTA LGYKAGMTH+VRD+
Sbjct: 1 MSHRKYEEPRSGSLAFLPRKRAAKHRGHIKSFPKDDPKKPVHLTAMLGYKAGMTHVVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT++ETPP+V+VGVVGYV+TPRGLR+L TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKMHKREVVEAVTVVETPPMVIVGVVGYVETPRGLRALTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +SKKKAFT+Y KK+ ++G + +LE++KKY TV+RVLAHTQ+ + GL QKKAH
Sbjct: 121 NWYRSKKKAFTRYAKKHSENNG-ASVARELERIKKYATVVRVLAHTQLSQT-GLAQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KV+FA FEK + +VF+++E ID+I VTKG GY GV++RWGVT+
Sbjct: 179 LSEIQVNGGSIADKVEFAKANFEKTFDVKSVFEQNECIDVIAVTKGHGYSGVISRWGVTK 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP++V F+VAR+GQ+GYH RT +N KIY++ + E S T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSKVMFSVARSGQDGYHRRTTINHKIYRIDNGTNEG-SGST 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD T+K I P+GG+ HY ++ D++++KG G KKRV+TLR++L TSR LEEI L
Sbjct: 298 EFDLTKKSINPVGGWSHYPLIRNDFVMLKGSIPGVKKRVITLRKALRVHTSRTHLEEITL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKY 383
KFIDTSS+ GH ++Q+ EKA++
Sbjct: 358 KFIDTSSQLGHTQWQSLDEKAQF 380
>gi|440913411|gb|ELR62861.1| 60S ribosomal protein L3-like protein, partial [Bos grunniens
mutus]
Length = 407
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/390 (63%), Positives = 309/390 (79%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 2 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 62 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 122 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 180
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+Q+NGG+VA+KV +A EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW +L
Sbjct: 181 MEVQLNGGTVAEKVAWAQARLEKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKL 240
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 241 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVVK 300
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR AL
Sbjct: 301 NNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLGHHSRQAL 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 361 ENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|403273327|ref|XP_003928470.1| PREDICTED: 60S ribosomal protein L3-like [Saimiri boliviensis
boliviensis]
Length = 407
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGK+ +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKEQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTNYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/384 (61%), Positives = 299/384 (77%), Gaps = 5/384 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG+LGF PRKR HRG+++AFPKD+ LTAF G+KAGMTHI+R V
Sbjct: 1 MSHRKFEAPRHGNLGFTPRKRTKHHRGRIRAFPKDNTKAQPHLTAFAGFKAGMTHILRTV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSKL+ EAVTI+ETPPLVVVG+VGY++TPRGLR+L TVW+ + ++ RRFYK
Sbjct: 61 ERPGSKLNGNVVVEAVTIVETPPLVVVGIVGYIETPRGLRALTTVWSTKIAKDTLRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFT Y K + K+++ QL+++ KYC V+RV+ HTQ+ K+ L+QKK H
Sbjct: 121 NWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL-NLRQKKNH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E+QVNGG+ QKV+FA G EK++ +D VF ++E ID++GVTKGKG GV+ R+GV
Sbjct: 177 VFEVQVNGGNTEQKVNFAKGLLEKEVKVDQVFNQNEQIDVLGVTKGKGVAGVIKRFGVKH 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+ + ++A T
Sbjct: 237 LQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AAGDKNTAST 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITP+GGFPHYG + D+L++KG VGPKKRVV LR+SL+ QTSR ALEEI L
Sbjct: 296 EADLTSKAITPLGGFPHYGEIRNDFLMLKGGIVGPKKRVVLLRKSLVPQTSRKALEEITL 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYY 384
KF+DTSSK GHGRFQT +EKAK+Y
Sbjct: 356 KFVDTSSKIGHGRFQTQEEKAKFY 379
>gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens]
Length = 407
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 307/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLV VGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVAVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens]
gi|397472395|ref|XP_003807730.1| PREDICTED: 60S ribosomal protein L3-like [Pan paniscus]
gi|426380751|ref|XP_004057025.1| PREDICTED: 60S ribosomal protein L3-like [Gorilla gorilla gorilla]
gi|2500230|sp|Q92901.3|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like
gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens]
gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens]
gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens]
Length = 407
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|375332089|gb|AFA52584.1| ribosomal protein L3 superfamily protein [Vaucheria litorea]
Length = 395
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/389 (65%), Positives = 316/389 (81%), Gaps = 4/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLP+KR +H GK+++FP DDPSK C LTAF+ YKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+PGSKLHKKET E VTI+E PP+VVVGVVGY +TP GL+++ +VWA HL++E RRR YK
Sbjct: 61 ERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAFT Y KK+ + ++I+ L+K+KK+C V+RV+AHTQ+ +K L+ KKAH
Sbjct: 121 NWHSSKKKAFTAYAKKFA--EKPEEIERDLKKIKKHCQVVRVIAHTQVGLVK-LRVKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+V +KVDFA G FE+ +PI +VF KDE ID++G TKG G +GVV RWGVTR
Sbjct: 178 IMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L RKTHRGLRKVACIG+WHPARV+F+VARAGQ+GYHHRTE+NKKIY++G+ E S T
Sbjct: 238 LARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINKKIYRIGQKGDEG-SCTT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D T K ITPMGGFPHYG +NED++++KG VG KKR VTLR+SLL +SR +E I L
Sbjct: 297 EADLTVKSITPMGGFPHYGEINEDWIMVKGGLVGTKKRCVTLRKSLLSLSSRRYMESIDL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSK+GHGRFQT+ E+ K+ G L +
Sbjct: 357 KFIDTSSKYGHGRFQTSDERDKFMGPLAS 385
>gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus]
Length = 407
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/391 (63%), Positives = 309/391 (79%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 RNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGCFQTAQEKRAFMG 390
>gi|402907275|ref|XP_003916403.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 407
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAEEKRAFMG 390
>gi|354478689|ref|XP_003501547.1| PREDICTED: 60S ribosomal protein L3-like [Cricetulus griseus]
Length = 407
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDP +P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPKQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFY+
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ GKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDMTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|332240032|ref|XP_003269194.1| PREDICTED: 60S ribosomal protein L3-like [Nomascus leucogenys]
Length = 407
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPP+VVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPVVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGPHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|443896762|dbj|GAC74105.1| inorganic phosphate transporter [Pseudozyma antarctica T-34]
Length = 525
Score = 501 bits (1290), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/359 (66%), Positives = 290/359 (80%), Gaps = 3/359 (0%)
Query: 30 KAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGV 89
+ FPKDDP KP LTA +GYKAGMTHIVRD+++PGSK+HKKE EAVT+IETPP+V VGV
Sbjct: 164 RNFPKDDPKKPVHLTAMIGYKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGV 223
Query: 90 VGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQ 149
VGYV+TPRGLRSL TVWA+HL++EV+RRFYKNW +SKKKAFTKY KK+ ++G I +
Sbjct: 224 VGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNGSS-ISRE 282
Query: 150 LEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPID 209
LE++KKYCTV+RVLAHTQ+RK GLKQKK+HLMEIQ+NGGSVA KVDFA FEK +
Sbjct: 283 LERIKKYCTVVRVLAHTQVRKT-GLKQKKSHLMEIQINGGSVADKVDFAKEHFEKTFDVK 341
Query: 210 AVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVAR 269
+VF+++E+ID+I VTKG GYEGV RWG +LPRKTHRGLRK+ACIGAWHPA V FTVAR
Sbjct: 342 SVFEQNEIIDVIAVTKGHGYEGVTARWGTKKLPRKTHRGLRKIACIGAWHPANVMFTVAR 401
Query: 270 AGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIK 329
+GQ+GYHHRTE+ KKIY++ ++ S T+FD TEK ITP+GGFPHYG+V D+++IK
Sbjct: 402 SGQDGYHHRTEIGKKIYRISNG-EDKTSGSTDFDTTEKTITPLGGFPHYGLVKNDFVMIK 460
Query: 330 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
G C G KKRV+TLR+SL TSR ALE + LK+I TSS G G FQT EK + G+ K
Sbjct: 461 GSCPGVKKRVLTLRKSLQVHTSRRALENVSLKWISTSSTMGKGVFQTPAEKDAFLGQRK 519
>gi|149751051|ref|XP_001497954.1| PREDICTED: 60S ribosomal protein L3-like [Equus caballus]
Length = 407
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK +++ GKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACRRWRDASGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKVV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRGA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGRFQTAQEKRVFMG 390
>gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus]
Length = 407
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK++P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV + EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 RNNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 LENIELKFIDTTSKFGHGCFQTAQEKRAFMG 390
>gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum]
Length = 640
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/367 (63%), Positives = 302/367 (82%), Gaps = 4/367 (1%)
Query: 22 ASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIET 81
+++ RGKVK+FPKDD KP LTA LGYKAGMT IVRD+++PG+K+HKKE EAVT+IET
Sbjct: 272 SAQTRGKVKSFPKDDTKKPVHLTAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIET 331
Query: 82 PPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDD 141
PP+V+VGVVGYV+TPRGLRSL TVWA+HL+++++RRFYKNW KSKKKAFTKY K++ +
Sbjct: 332 PPMVIVGVVGYVETPRGLRSLTTVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRHAGEG 391
Query: 142 GKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGF 201
K I +L ++KKYCTV+RVLAH+QIRK LKQKK HLMEIQVNGGS+ KVDFA+
Sbjct: 392 --KAISHELGRIKKYCTVVRVLAHSQIRKTP-LKQKKTHLMEIQVNGGSITDKVDFAFSH 448
Query: 202 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPA 261
FEK++ I ++F++DEMID+I VTKG G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+
Sbjct: 449 FEKEVTISSIFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPS 508
Query: 262 RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVV 321
V +TVARAGQ+GYHHRT +N KIY++G + E + A TEFD T+K ITP+GGFP YG +
Sbjct: 509 HVQWTVARAGQDGYHHRTSVNHKIYRIGSGTDEGN-ASTEFDITKKTITPLGGFPRYGEI 567
Query: 322 NEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKA 381
D++++KG G KKRV+TLR+S+ TSR +LE+++LK+IDTSSKFGHG++QT +EK
Sbjct: 568 KNDFVMVKGSVPGVKKRVMTLRKSMFIHTSRRSLEKVELKWIDTSSKFGHGQYQTKEEKH 627
Query: 382 KYYGRLK 388
++ G LK
Sbjct: 628 QFLGTLK 634
>gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens]
Length = 406
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/390 (63%), Positives = 307/390 (78%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 121 WHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 180 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKI+++G+
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIFRIGRGPHMEDGKLVK 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A+
Sbjct: 300 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAV 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 ENIELKFIDTTSKFGHGRFQTAQEKRAFMG 389
>gi|366992279|ref|XP_003675905.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
gi|342301770|emb|CCC69541.1| hypothetical protein NCAS_0C05510 [Naumovozyma castellii CBS 4309]
Length = 387
Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 317/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHG LGFLPRKRA RG+VK+FPKDD +KP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGHLGFLPRKRAVSVRGRVKSFPKDDKTKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D +I+ +L +++KY +V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--EIEKELARIRKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +DAVF+++EMID++ VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDAVFEQNEMIDVVAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V +TVARAGQ GYHHRT +N K+Y++GK +S +A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWTVARAGQRGYHHRTSINHKVYRIGKGDDDS-NAST 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR A+E+++L
Sbjct: 297 NFDRTKKTITPMGGFVHYGEINNDFVMVKGSIPGTRKRVVTLRKSLYTNTSRKAVEDVQL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTDAEKRAFMGTLK 384
>gi|344292026|ref|XP_003417729.1| PREDICTED: 60S ribosomal protein L3-like [Loxodonta africana]
Length = 579
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/390 (63%), Positives = 308/390 (78%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+SRHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 174 SHRKFSAPRHGHLGFLPHKRSSRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 233
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV T RGLRS T++A+HL++E RRRFYK+
Sbjct: 234 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATTRGLRSFKTIFAEHLSDECRRRFYKD 293
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 294 WHKSKKKAFTKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 352
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A + EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 353 MEIQLNGGTVAEKVAWAQAWLEKQVPVHSVFSQSEIIDVIAVTKGRGIKGVTSRWHTKKL 412
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY +G+
Sbjct: 413 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYCIGRGPHMEEGKLVR 472
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR AL
Sbjct: 473 NNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCISGTKKRVITLRKSLLVHHSRRAL 532
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKF+DT+SKFGHGRFQT QEK + G
Sbjct: 533 ENIQLKFVDTTSKFGHGRFQTAQEKRAFMG 562
>gi|395835745|ref|XP_003790833.1| PREDICTED: 60S ribosomal protein L3-like [Otolemur garnettii]
Length = 407
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 308/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+D+PS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDNPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ GKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKSCKRWRDTSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+ + +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVSVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYQIGRGIHMEDGKMV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE+I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 360 LEKIELKFIDTTSKFGHGRFQTAQEKRAFMG 390
>gi|355756447|gb|EHH60055.1| 60S ribosomal protein L3-like protein [Macaca fascicularis]
Length = 425
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 246/389 (63%), Positives = 307/389 (78%), Gaps = 7/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 11 LSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 70
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 71 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 130
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 131 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 189
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 190 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 249
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 250 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLV 309
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 310 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 369
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
+E I+LKFIDT+SKFGHGRFQT +EK +
Sbjct: 370 VENIELKFIDTTSKFGHGRFQTAEEKRAF 398
>gi|431906679|gb|ELK10800.1| 60S ribosomal protein L3-like protein, partial [Pteropus alecto]
Length = 406
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/390 (63%), Positives = 307/390 (78%), Gaps = 7/390 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 SHRKFSAPRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 61 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTK K++ +GKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+
Sbjct: 121 WHKSKKKAFTKACKRWRDANGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHI 179
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 180 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 239
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGQGPHMEDGKVVK 299
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR AL
Sbjct: 300 NNASTSYDMTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRRAL 359
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 360 ENIELKFIDTTSKFGHGCFQTAQEKRVFMG 389
>gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta]
Length = 407
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 247/391 (63%), Positives = 306/391 (78%), Gaps = 7/391 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+N G+VA KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNVGTVADKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 300 KNNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+E I+LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 360 VENIELKFIDTTSKFGHGRFQTAEEKRAFMG 390
>gi|50288047|ref|XP_446452.1| 60S ribosomal protein L3 [Candida glabrata CBS 138]
gi|74661344|sp|Q6FTJ2.1|RL3_CANGA RecName: Full=60S ribosomal protein L3
gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata]
Length = 387
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 316/388 (81%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY + +I+ +L ++KKY TV+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQNGA--EIERELARIKKYATVVRVLVHTQVRKTP-LVQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYHHRT +N KIY++GK E ++A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF HYG+VN D++++KG G KKRVVTLR+SL TSR A+EE+ L
Sbjct: 297 NFDRTKKTINPMGGFVHYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKAVEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|353227573|emb|CCA78076.1| probable RPL3-60s ribosomal protein l3 [Piriformospora indica DSM
11827]
Length = 360
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 297/356 (83%), Gaps = 2/356 (0%)
Query: 34 KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV 93
KDDP KP LTA LGYKAGMTH+VRD+++PGSK+HK+E EAVTIIETPPLVVVGVVGYV
Sbjct: 5 KDDPKKPVHLTATLGYKAGMTHVVRDLDRPGSKMHKREVVEAVTIIETPPLVVVGVVGYV 64
Query: 94 KTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKM 153
+TPRGLR+L TVWA HL+EE++RRFYKNW +SKKKAFTKY KK G+K + +LE++
Sbjct: 65 ETPRGLRTLTTVWAAHLSEELKRRFYKNWYRSKKKAFTKYAKKMSEAAGQKSMDRELERI 124
Query: 154 KKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQ 213
+KYCTV+RVLAHTQIRK GLKQKKAHLMEIQVNGGS+ KV FA G FE+++ + +F+
Sbjct: 125 RKYCTVVRVLAHTQIRKT-GLKQKKAHLMEIQVNGGSIPDKVAFARGLFEQEVAVSTIFE 183
Query: 214 KDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 273
+DE++D+IGVTKG G+EGV RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQN
Sbjct: 184 QDEVVDVIGVTKGHGFEGVTARWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQN 243
Query: 274 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCV 333
GYHHRTE+NKKIY++G + A T+ D T+K ITP+GGFPHYG+V D+L++KG
Sbjct: 244 GYHHRTELNKKIYRVGTGGDCKNGA-TDADATDKTITPLGGFPHYGIVKNDFLMLKGSVP 302
Query: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
G KKRV+T+R+SL+ TSR LE+++LKFIDTSSKFGHG+FQT QEKA + G LKA
Sbjct: 303 GTKKRVLTIRKSLMVHTSRRDLEKVQLKFIDTSSKFGHGKFQTVQEKAAFLGTLKA 358
>gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii 17XNL]
gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
Length = 386
Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust.
Identities = 241/388 (62%), Positives = 297/388 (76%), Gaps = 7/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ P TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELPPHFTAFMGYKSGMSHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TI+E P+VVVG+VGY +TP+GL+ L VWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS KKAFTK +T K +++KYCT++R + HTQ K L+ KKAH
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAVCHTQPSKTP-LRLKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG + K++F EK IP+ VF +EMID+I VTKG G +GVV+R+GV R
Sbjct: 175 IMEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKGVVSRYGVKR 234
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPARV F V R GQ GY HRTE NKKIY++G ++ ++A T
Sbjct: 235 LPRKTHRGLRKVACIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNAST 293
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ D TEK ITPMGGFPHYGVVNED++L+KGC G KKR +TLR++L+ Q SR AL ++ L
Sbjct: 294 DADITEKKITPMGGFPHYGVVNEDFILLKGCISGTKKRPITLRKTLVPQVSRDALSQVSL 353
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK GHGRFQT++EK KYYG LK
Sbjct: 354 KFIDTSSKLGHGRFQTSEEKVKYYGPLK 381
>gi|6324637|ref|NP_014706.1| ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae S288c]
gi|2507307|sp|P14126.4|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance
of killer protein 8; AltName: Full=RP1; AltName:
Full=Trichodermin resistance protein; AltName: Full=YL1
gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|365767253|pdb|3U5E|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome A
gi|365767294|pdb|3U5I|B Chain B, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 60s
Subunit, Ribosome B
gi|410562480|pdb|4B6A|B Chain B, Cryo-Em Structure Of The 60s Ribosomal Subunit In Complex
With Arx1 And Rei1
gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae]
gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae]
gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789]
gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a]
gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291]
gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118]
gi|285814949|tpg|DAA10842.1| TPA: ribosomal 60S subunit protein L3 [Saccharomyces cerevisiae
S288c]
gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB]
gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO]
gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796]
gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13]
gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3]
gi|349581226|dbj|GAA26384.1| K7_Rpl3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763295|gb|EHN04825.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296394|gb|EIW07496.1| Rpl3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 387
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 313/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|441617792|ref|XP_004092915.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3 [Nomascus
leucogenys]
Length = 375
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/366 (64%), Positives = 298/366 (81%), Gaps = 7/366 (1%)
Query: 29 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
+K+FPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+E PP+VVVG
Sbjct: 1 MKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEAPPMVVVG 60
Query: 89 VVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQA 148
+VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++
Sbjct: 61 IVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEK 120
Query: 149 QLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPI 208
MKKYC VIRV+AHTQ+R + L+Q+ AHLMEIQVNGG+VA+K+D+A E+Q
Sbjct: 121 DFSSMKKYCQVIRVIAHTQMRLLP-LRQRXAHLMEIQVNGGTVAEKLDWARERLEQQYLX 179
Query: 209 DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVA 268
+ VF +DEMID+IG +GKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VA
Sbjct: 180 EPVFGQDEMIDVIGXDQGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVA 239
Query: 269 RAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVN 322
RAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V
Sbjct: 240 RAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVT 299
Query: 323 EDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAK 382
D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK
Sbjct: 300 NDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKA 359
Query: 383 YYGRLK 388
+ G LK
Sbjct: 360 FMGPLK 365
>gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
Length = 388
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 313/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|406605586|emb|CCH43019.1| 60S ribosomal protein L3 [Wickerhamomyces ciferrii]
Length = 389
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 318/388 (81%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA+ RG+VK+FP+DD +KP LTA LGYKAGM+ IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAASIRGRVKSFPRDDKTKPVHLTATLGYKAGMSTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++E++RRFYK
Sbjct: 61 DRPGSKMHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KY +G++ I+ +L ++ KY TV+RVL HTQ++K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYAAKYANKNGEQ-IERELARITKYATVVRVLVHTQVKKTP-LVQKKAH 178
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS+A KV++A FEK + +D+V +++E ID+I VTKG G+EGV RWG TR
Sbjct: 179 LAEIQVNGGSIADKVNWAREHFEKTVSVDSVIEQNENIDVIAVTKGHGFEGVTHRWGTTR 238
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHP+ V +TVARAGQNGYH RT +N K+Y++G+ E+++A T
Sbjct: 239 LPRKTHRGLRKVACIGAWHPSHVQWTVARAGQNGYHSRTSINHKVYRVGRGDDEANAA-T 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K ITP+GGF HYG V D++++KG GPKKRVVTLR+SL TSR ALE++ L
Sbjct: 298 EFDRTKKTITPLGGFVHYGEVKNDFVILKGSIPGPKKRVVTLRKSLYTDTSRRALEQVTL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 358 KWIDTASKFGKGRFQTPAEKHAFLGTLK 385
>gi|410902231|ref|XP_003964598.1| PREDICTED: 60S ribosomal protein L3-like [Takifugu rubripes]
Length = 408
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/394 (61%), Positives = 319/394 (80%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG GFLP KR+ +HRG+V+++PKDD +P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFHAPRHGHTGFLPHKRSKKHRGRVRSWPKDDARRPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ G K K+E EAVTIIETPP++VVGVVGY++T GLRS +V+A+HL++E +RRFY+
Sbjct: 61 QRVGLKQAKREEVEAVTIIETPPVIVVGVVGYIQTVHGLRSFKSVFAEHLSDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK++ + GKK ++ + E+MKKYC+VIRV+ HTQ+R + + QKKAH
Sbjct: 121 NWYKSKKKAFTKYSKKWQDEKGKKQLEKEFEQMKKYCSVIRVIIHTQMRLLP-IGQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGGS++ KVD+A E+ +P+ +VF +DE IDIIGVTKG+G++GV++RW +
Sbjct: 180 IMEVQLNGGSISDKVDWAKEHLEQAVPVSSVFYQDETIDIIGVTKGRGFKGVMSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV +T+ARAGQ GY+HRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGYTIARAGQKGYYHRTEINKKIYRIGRGVHVHDGKVI 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D ++K ITPMGGFPHYG VN D++++KGC VGPKKRV+TLR+SLL TSR A
Sbjct: 300 RNNASTHYDTSQKTITPMGGFPHYGEVNNDFVMVKGCVVGPKKRVLTLRKSLLVHTSRKA 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E I+LKFIDT+SKFGHGRFQT QEK + G LK
Sbjct: 360 RETIELKFIDTTSKFGHGRFQTAQEKRAFMGPLK 393
>gi|444320033|ref|XP_004180673.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
gi|387513716|emb|CCH61154.1| hypothetical protein TBLA_0E00930 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++ KY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDPA--SIERELARITKYASVVRVLVHTQIRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L E+Q+NGGS+A KV +A FEK + +D+VF+++E+ID++ VTKG G+EGV RWG R
Sbjct: 178 LAEVQLNGGSIADKVQWAKEHFEKTVSVDSVFEQNELIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG WHPA V ++VARAGQNGYHHRT +N K+Y++GKA E+ S T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQNGYHHRTSINHKVYRVGKAGDEA-SGAT 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K +TPMGGF HYG +N D++++KG G +KRVVTLR+SL TSR ALEE+ L
Sbjct: 297 NFDRTKKTVTPMGGFVHYGHINNDFIMLKGSIPGNRKRVVTLRKSLYTHTSRKALEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 387
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 314/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ RG+VK+FPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EVRRRFYK
Sbjct: 61 DRPGSKFHKREIVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAF+KY+ KY D I+ +L ++KKY +V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFSKYSTKYAQDGAA--IERELARIKKYASVVRVLVHTQVRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID++ VTKG G+EGV RWG R
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKR 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG WHPA V ++VARAGQ GYHHRT +N K+Y++GK E+++A T
Sbjct: 238 LPRKTHRGLRKVACIGPWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDEANAA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF YG+VN D++++KG G KKRVVTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTINPMGGFVQYGMVNNDFVMVKGSIPGCKKRVVTLRKSLYTNTSRKALEEVTL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
In File 1s1h
Length = 386
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/387 (65%), Positives = 312/387 (80%), Gaps = 4/387 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD++
Sbjct: 1 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYKN
Sbjct: 61 RPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QKKAHL
Sbjct: 121 WYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHL 177
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +L
Sbjct: 178 AEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKL 237
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
PRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T
Sbjct: 238 PRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TS 296
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ LK
Sbjct: 297 FDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLK 356
Query: 362 FIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 WIDTASKFGKGRFQTPAEKHAFMGTLK 383
>gi|401623590|gb|EJS41683.1| rpl3p [Saccharomyces arboricola H-6]
Length = 387
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/388 (65%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SK LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDKSKAVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY + I+ +L ++KKY +V+RVL HTQ+RK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQEGA--GIERELARIKKYASVVRVLVHTQVRKTP-LVQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGSV++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSVSEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF HYG +N D++++KGC G +KR+VTLR+SL TSR ALEE+ L
Sbjct: 297 NFDRTKKTINPMGGFVHYGEINNDFVMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|365758431|gb|EHN00274.1| Rpl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 387
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/388 (65%), Positives = 311/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVG+VGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGIVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D ++ +L ++KKY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GVERELARVKKYASVVRVLVHTQIRKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK I +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTIAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N K+Y++GK E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKVYRVGKGDDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K I PMGGF HYG + D++++KGC G +KRVV LR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTINPMGGFVHYGDLKNDFIMVKGCIPGNRKRVVNLRKSLYTNTSRKALEEVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|448087719|ref|XP_004196395.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
gi|359377817|emb|CCE86200.1| Piso0_005857 [Millerozyma farinosa CBS 7064]
Length = 389
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 251/388 (64%), Positives = 313/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLPRKRA++ RG+VK+FPKD SKP LTAFLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGSLGFLPRKRAAKQRGRVKSFPKDVKSKPVSLTAFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E EA T+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL+EE++RRFYK
Sbjct: 61 DRPGSKVHKREIVEAATVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D + ++ +L ++KKY +V+RVL HTQI+K L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDATQ--VERELARIKKYASVVRVLVHTQIKKTP-LSQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGGS++ KVD+A FEK + +D+VF+++EM+D I VTKG+G EGV RWG +
Sbjct: 178 LAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGRGIEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIG+WHPA V ++V RAGQ+GYHHRT +N K+Y++G ES+ A T
Sbjct: 238 LPRKTHRGLRKVACIGSWHPANVQWSVPRAGQDGYHHRTSINHKVYRVGSGEDESNGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFDRT+K I PMGGF YG V D++L+KG G +KRV+TLR+SL TSR ALE++ L
Sbjct: 297 EFDRTKKTINPMGGFVRYGEVKNDFVLLKGSIPGVRKRVITLRKSLYVDTSRRALEKVNL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|332825391|ref|XP_001143080.2| PREDICTED: 60S ribosomal protein L3-like [Pan troglodytes]
Length = 718
Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust.
Identities = 237/368 (64%), Positives = 297/368 (80%), Gaps = 7/368 (1%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GK A SKP LTAFLGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP+VV
Sbjct: 342 GKCLALRDGVSSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVV 401
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KSKKKAFTKY KK++ +D KK +
Sbjct: 402 VGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDDKKQL 461
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+
Sbjct: 462 EKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQV 520
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 266
P++ VF +DEMID+IGVTKGKGY+GV +RW LPRKTH+GLRKVACIGAWHPARV+F+
Sbjct: 521 PVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKNLPRKTHQGLRKVACIGAWHPARVAFS 580
Query: 267 VARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGV 320
VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG
Sbjct: 581 VARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 640
Query: 321 VNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEK 380
V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK
Sbjct: 641 VTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEK 700
Query: 381 AKYYGRLK 388
+ G LK
Sbjct: 701 KAFMGPLK 708
>gi|348537834|ref|XP_003456398.1| PREDICTED: 60S ribosomal protein L3-like [Oreochromis niloticus]
Length = 422
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 245/393 (62%), Positives = 313/393 (79%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG +GFLP KR+ +HRG+V+++PKD+PS P LTAFLGYKAGMTH +R+V
Sbjct: 16 SHRKFHAPRHGHMGFLPCKRSKKHRGRVRSWPKDNPSHPVHLTAFLGYKAGMTHTLREVH 75
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+ G K K+E EAVTIIETPP++VVGVVGY+KT RGLR+L T++A+HL++E +RRFYKN
Sbjct: 76 RTGLKQSKREEVEAVTIIETPPVIVVGVVGYIKTIRGLRALKTIFAEHLSDECKRRFYKN 135
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W KSKKKAFTKY KK++ + GKK + MKKYC+VIRV+ H+Q+R + L+QKKAH+
Sbjct: 136 WYKSKKKAFTKYAKKWQDETGKKQLDKDFNAMKKYCSVIRVIVHSQMRLLP-LRQKKAHV 194
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
ME+Q+NGG+++ KVD+A E+ +P+ AVF +DEMID+IGVTKG G++GV +RW +L
Sbjct: 195 MEVQLNGGTISDKVDWAKEHLEQAVPVSAVFYQDEMIDVIGVTKGHGFKGVTSRWHTKKL 254
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV FT ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 255 PRKTHKGLRKVACIGAWHPARVGFTEARAGQKGYHHRTEINKKIYRIGRGLHIQDGKVIR 314
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D ++K ITPMGGFP YG VN D++++KGC +G KKRV+TLR+SLL QTSR
Sbjct: 315 NNASTNYDISQKTITPMGGFPRYGEVNNDFVMVKGCVIGAKKRVLTLRKSLLTQTSRKYK 374
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E I+LKFIDT+SKFGHGRFQT QEK + G LK
Sbjct: 375 EGIELKFIDTTSKFGHGRFQTAQEKRAFMGPLK 407
>gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae]
Length = 387
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/388 (65%), Positives = 312/388 (80%), Gaps = 4/388 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+
Sbjct: 1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGSKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QKKAH
Sbjct: 121 NWYKSKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAH 177
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQ+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +
Sbjct: 178 LAEIQLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKK 237
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVACIGA HPA V ++VARAGQ GYH RT +N KIY++GK E++ A T
Sbjct: 238 LPRKTHRGLRKVACIGACHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-T 296
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
FDRT+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ L
Sbjct: 297 SFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSL 356
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
K+IDT+SKFG GRFQT EK + G LK
Sbjct: 357 KWIDTASKFGKGRFQTPAEKHAFMGTLK 384
>gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens]
gi|397502003|ref|XP_003821662.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Pan paniscus]
gi|426394516|ref|XP_004063541.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Gorilla gorilla
gorilla]
Length = 354
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/394 (60%), Positives = 293/394 (74%), Gaps = 56/394 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KKAH
Sbjct: 121 NWHKSK--------------------------------------------------KKAH 130
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 191 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 250
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 251 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 310
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 311 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 344
>gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis]
Length = 284
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/273 (88%), Positives = 258/273 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDPSKPC+LTAFLGYKAGMTHIV DV
Sbjct: 7 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPCKLTAFLGYKAGMTHIVGDV 66
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIE PP+VVVGVVGYVKTPRGLRSL TVWAQHL+EEV+RRFYK
Sbjct: 67 EKPGSKLHKKETCEAVTIIEAPPMVVVGVVGYVKTPRGLRSLNTVWAQHLSEEVKRRFYK 126
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAF KY+K YE+++GKK I++Q EK+ KY TVIRVLAHTQIRKMKGLKQKKAH
Sbjct: 127 NWCKSKKKAFAKYSKNYESEEGKKSIESQFEKLIKYATVIRVLAHTQIRKMKGLKQKKAH 186
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG++AQKV+FA FFEKQ+PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR
Sbjct: 187 LMEIQVNGGTIAQKVEFAKSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 246
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQN 273
LPRKTHRGLRKVACIGAWHPAR S TVARAG
Sbjct: 247 LPRKTHRGLRKVACIGAWHPARFSXTVARAGHE 279
>gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/395 (61%), Positives = 308/395 (77%), Gaps = 8/395 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLP+KR HRG+V++FP+D+ LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GSK HKKE EAVT++ETPP+V VG+VGYV+TPRGLR L TV+A +++E RRFYK
Sbjct: 61 DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ KSKKK F+KY + +T++GKK+ + QL ++ KYCTVIRV+AHT+I + L+QKKAH
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVLN-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGG+ A+KV FA G E+ IP+ VF +DE ID++G +KG+G+EGV RWG R
Sbjct: 180 IMEIQVNGGTPAEKVAFAKGLLEQDIPVGTVFVQDENIDVLGASKGRGFEGVTHRWGTKR 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------ 294
LPRKTH+GLRKVACIGAWHPA V ++VARAGQNGYHHRTEMNKKIY +GK +
Sbjct: 240 LPRKTHKGLRKVACIGAWHPANVQYSVARAGQNGYHHRTEMNKKIYMVGKGYHKDDKGRY 299
Query: 295 -SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
+ +A D T+K ITPMGGFP YG+V +D+L++KG VG KKR +TLR++++ TSR
Sbjct: 300 VTDNATVAADPTKKCITPMGGFPRYGIVKQDFLIVKGSTVGVKKRALTLRKAVIPDTSRR 359
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDTSSKFGHGRFQT EK + G+LK
Sbjct: 360 GQEKITLKFIDTSSKFGHGRFQTKAEKRAFMGKLK 394
>gi|403335216|gb|EJY66782.1| 60S ribosomal protein L3 [Oxytricha trifallax]
Length = 397
Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust.
Identities = 236/393 (60%), Positives = 310/393 (78%), Gaps = 5/393 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PR GSL +LPR+R HRG++++FP+DD P LTAF+GYKAGMTH+ R
Sbjct: 1 MSHRKYECPRSGSLAYLPRRRTRHHRGRIRSFPRDDVKAPIHLTAFVGYKAGMTHVARHH 60
Query: 61 EK-PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
EK G K+ K++ E VT+IETPP+ +VG+VGY++TPRGLR+L TVWAQH+ ++V+RRFY
Sbjct: 61 EKREGKKVIKRDIVEPVTVIETPPMKIVGLVGYIETPRGLRALATVWAQHIPDQVKRRFY 120
Query: 120 KNWCKSKKKAFTKYTKKYETDD-GKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
KNWC+SKKKAFTKY ++++ DD KK I+ LE++KKYC V+RVL TQ+ K+ +Q+K
Sbjct: 121 KNWCQSKKKAFTKYAQRWQEDDKSKKSIKRDLERIKKYCQVVRVLTSTQLDKL-NFRQRK 179
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AHL+EIQVNGG+VAQKVD+++ FE ++ + +F +EMID IGVTKG G EGV+ R+GV
Sbjct: 180 AHLIEIQVNGGTVAQKVDWSFAKFESEVSVAEIFNDNEMIDTIGVTKGYGTEGVIKRFGV 239
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES--H 296
TR+PRKTHRGLRKV CIGAWHPA V +TVAR GQ GYH RTE NKKIY++G + +
Sbjct: 240 TRMPRKTHRGLRKVGCIGAWHPAAVKWTVARRGQLGYHSRTEQNKKIYRVGAGAVRGVKN 299
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
+A TE D EK+ITP+GGFPHYGVVN D++++KGC +G KKR V LR+S+ QT+ ALE
Sbjct: 300 NATTEADAIEKNITPLGGFPHYGVVNNDFVMVKGCVMGTKKRPVILRKSIFPQTTNAALE 359
Query: 357 EIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
++++KFIDTSSK GHG+FQT +EK K+ G L +
Sbjct: 360 KMEIKFIDTSSKIGHGKFQTVEEKDKFLGPLAS 392
>gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3 isoform 2 [Callithrix jacchus]
Length = 354
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 239/394 (60%), Positives = 293/394 (74%), Gaps = 56/394 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KKAH
Sbjct: 121 NWHKSK--------------------------------------------------KKAH 130
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V++K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 191 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 250
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 251 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 310
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 311 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 344
>gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi]
gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi]
Length = 416
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/390 (62%), Positives = 300/390 (76%), Gaps = 5/390 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRK+A R RG+VKAFPKDD K LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKKARRERGRVKAFPKDDQKKATHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
KPGSK+HKKE +AVTIIE PP+VVVGVVGY +TP GL+++ TVWA++++ E RR +YK
Sbjct: 61 NKPGSKMHKKEGLDAVTIIEAPPMVVVGVVGYKQTPTGLKAIGTVWAKNISNEFRRVYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WC+SKK+AFTK TK Y ++ LE KK VIR++AHTQ K+ KKAH
Sbjct: 121 DWCRSKKRAFTKLTKTYLEQAAQEKRTQALESFKKNADVIRIVAHTQPSKVTATNNKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EIQVNGG+V +K+ FA EK + +D+VF KDE ID+I V+KGKG +GVV+RWGV R
Sbjct: 181 VAEIQVNGGTVDEKIKFAVANLEKLVSVDSVFAKDEPIDVIAVSKGKGTKGVVSRWGVRR 240
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH---S 297
LPRKTHRGLRKVACIGAWHPARVSF+VARAGQ G+ HR NKKIY++GK+++ S
Sbjct: 241 LPRKTHRGLRKVACIGAWHPARVSFSVARAGQKGFFHRVHQNKKIYRIGKSNKTEEGKKS 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ--TSRLAL 355
AMT+FD TEKD+ PMGGF +YGVV D++++KG GP +RVVTLR++L+ + R
Sbjct: 301 AMTDFDLTEKDVNPMGGFVNYGVVENDWVMVKGNVQGPPRRVVTLRKTLVPEHKWGRDMK 360
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
EEI LKFIDT+SK G G+FQTT EK K+ G
Sbjct: 361 EEIVLKFIDTTSKVGKGKFQTTTEKNKFLG 390
>gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei]
gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 480
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/391 (59%), Positives = 299/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 52 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ +K +IRV+AHTQ+RK++ + KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++AQK++ A EK++ ID+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 352 ATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEK 411
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK+++YG LK
Sbjct: 412 ITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 442
>gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 480
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/391 (59%), Positives = 299/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 52 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 111
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 112 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 171
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ +K +IRV+AHTQ+RK++ + KK
Sbjct: 172 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 231
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++AQK++ A EK++ ID+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 232 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 291
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 292 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 351
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 352 ATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEK 411
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK+++YG LK
Sbjct: 412 ITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 442
>gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927]
gi|449802250|pdb|3ZF7|FF Chain f, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei]
gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
gambiense DAL972]
Length = 429
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/391 (59%), Positives = 299/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ +K +IRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++AQK++ A EK++ ID+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK+++YG LK
Sbjct: 361 ITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 391
>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
gi|74894030|sp|O96774.1|RL3_TETTH RecName: Full=Ribosomal protein L3
gi|358440087|pdb|4A17|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 2.
gi|358440133|pdb|4A1A|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 3.
gi|358440179|pdb|4A1C|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 4.
gi|358440225|pdb|4A1E|B Chain B, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 1
gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
SB210]
Length = 391
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 234/386 (60%), Positives = 304/386 (78%), Gaps = 6/386 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGF PR+R HRG+ ++FPKDDPSK LTAF G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFRPRRRTRHHRGRCRSFPKDDPSKKPHLTAFTGFKAGMTHILREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GS+ +KKE EAVT+IE PP+ +VGVVGY+ TPRGLR+L TVWA+ ++ ++RFYK
Sbjct: 61 DRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALTTVWAKTIDNNTKKRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW S KKAFT + K + D +D+ L++++KYC+V+RV+AHT + K+ L+QKK H
Sbjct: 121 NWANSNKKAFTHHEKNF--DQKAQDL--LLKRIEKYCSVVRVIAHTNMSKL-NLRQKKNH 175
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQVNGG VA+KV FA EK++ +D++F ++EM+D++GVTKGKG+ GV+ R+GV
Sbjct: 176 ILEIQVNGGKVAEKVAFAKSLLEKEVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVKH 235
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L +KTHRG RKV CIGAWHP+R+ FTV RAGQ GYHHRTE NKK+Y++GK S +A T
Sbjct: 236 LQKKTHRGYRKVGCIGAWHPSRIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDAS-NAST 294
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D T+K ITP+GGFPHYGVV D+++IKGCCVGPKKRV+TLR+S++ QT A E I L
Sbjct: 295 AGDVTDKAITPLGGFPHYGVVKNDFIMIKGCCVGPKKRVLTLRKSIIPQTHGAAKEIINL 354
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGR 386
KFIDTSSK GHGRFQT +EK K++GR
Sbjct: 355 KFIDTSSKIGHGRFQTVEEKDKFFGR 380
>gi|407850972|gb|EKG05117.1| ribosomal protein L13, putative [Trypanosoma cruzi]
Length = 462
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/391 (59%), Positives = 299/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 35 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 94
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 95 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 154
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + KK
Sbjct: 155 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 214
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++A+K++ A EK++ ID++FQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 215 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 274
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 275 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 334
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 335 ATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRVITLRRPMAPQTSRKLTEQ 394
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK++++G LK
Sbjct: 395 ITLKFIDTSSKIGHGRFQTKKEKSQWFGPLK 425
>gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi]
gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 428
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/391 (59%), Positives = 299/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++A+K++ A EK++ ID++FQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRVITLRRPMAPQTSRKLTEQ 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK++++G LK
Sbjct: 361 ITLKFIDTSSKIGHGRFQTKKEKSQWFGPLK 391
>gi|342180584|emb|CCC90060.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 429
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/391 (59%), Positives = 297/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++AQK++ A EK++ ID+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTSYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK+++YG LK
Sbjct: 361 ITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 391
>gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
Length = 346
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/342 (67%), Positives = 280/342 (81%), Gaps = 3/342 (0%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMT VRD+++PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTTVRDLDRPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL++EV+RRFYKNW KSKKKAFTKY K + + G I +LE++KKYCTV+RVLAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENSGA-SISRELERIKKYCTVVRVLAHT 119
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
QIRK LKQKKAHLME+QVNGGSVA KVDFA+G FEK I ID+VF+KDEMID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDSVFEKDEMIDVIAVTKG 178
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY
Sbjct: 179 HGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIY 238
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++GK S E +A TEFD ++K ITPMGGF YG V DY++IKG G KKRV+TLR++L
Sbjct: 239 RIGKGSDEG-NASTEFDVSKKQITPMGGFVRYGEVKNDYVMIKGSVPGVKKRVLTLRKTL 297
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
Q SR ALE+++LK+IDTSSKFGHG FQT EK + G LK
Sbjct: 298 YPQVSRKALEKVELKWIDTSSKFGHGVFQTPAEKRAFMGTLK 339
>gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/394 (60%), Positives = 291/394 (73%), Gaps = 56/394 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKSSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KKAH
Sbjct: 121 NWHKSK--------------------------------------------------KKAH 130
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 131 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 190
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVA IGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 191 LPRKTHRGLRKVARIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 250
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R A
Sbjct: 251 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRA 310
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 311 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 344
>gi|407411575|gb|EKF33582.1| ribosomal protein L13, putative [Trypanosoma cruzi marinkellei]
Length = 428
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/391 (58%), Positives = 298/391 (76%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTAEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG++A+K++ A EK++ ID++FQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAVTKGHGFTGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRVITLRRPMAPQTSRKLTEQ 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK +++G LK
Sbjct: 361 ITLKFIDTSSKIGHGRFQTKKEKNQWFGPLK 391
>gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
Length = 346
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 230/342 (67%), Positives = 279/342 (81%), Gaps = 3/342 (0%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMT VRD+E+PG+K+HKKE EAVTI+ETPP++ VGVVGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTTVRDLERPGAKMHKKEIVEAVTIVETPPMIAVGVVGYIETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL++EV+RRFYKNW KSKKKAFTKY K + + G + +LE++KKYCTV+R+LAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKNHSENKGA-SVARELERIKKYCTVVRLLAHT 119
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
QIRK LKQKKAHLME+QVNGGSVA KVDFA+G FEK I ID +F+KDEMID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEVQVNGGSVADKVDFAHGLFEKPIEIDTIFEKDEMIDVIAVTKG 178
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
G+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT N KIY
Sbjct: 179 HGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSCNHKIY 238
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++GK S E +A TEFD ++K ITPMGGF YG V DY++IKG G KKRV+TLR++L
Sbjct: 239 RIGKGSDEG-NASTEFDVSKKQITPMGGFVRYGEVKNDYVMIKGSVPGVKKRVLTLRKTL 297
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
Q SR ALE+++LK+IDTSSKFGHG FQT EK + G LK
Sbjct: 298 YPQVSRRALEKVELKWIDTSSKFGHGAFQTPAEKRAFMGTLK 339
>gi|444727301|gb|ELW67802.1| 60S ribosomal protein L3-like protein [Tupaia chinensis]
Length = 927
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/421 (58%), Positives = 310/421 (73%), Gaps = 41/421 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHALREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E +AVTI+ETPPLVVVGVVGYV TPRGLRS TV+A+H+++E RRRFYK
Sbjct: 61 HRPGLKISKREEVDAVTIVETPPLVVVGVVGYVATPRGLRSFKTVFAEHISDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI------------ 168
+W +SKKKAFTK +++ DG+K +Q M+KYC VIRV+ HTQ
Sbjct: 121 DWHRSKKKAFTKACRRWRDCDGRKQLQKDFAAMRKYCRVIRVIVHTQAPACGHVEGDREG 180
Query: 169 -----------------------RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQ 205
K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ
Sbjct: 181 PGALAGHVAPQVVVLGLTVLCPQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQ 240
Query: 206 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSF 265
+P+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV
Sbjct: 241 VPVHSVFSQSEVIDVIAVTKGRGIKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGC 300
Query: 266 TVARAGQNGYHHRTEMNKKIYKLGKA--SQES----HSAMTEFDRTEKDITPMGGFPHYG 319
++ARAGQ GYHHRTE+NKKIY++G+ +Q+ ++A T +D T+K ITP+GGFPHYG
Sbjct: 301 SIARAGQKGYHHRTELNKKIYRIGRGLHTQDGKIVRNNASTSYDVTDKAITPLGGFPHYG 360
Query: 320 VVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQE 379
VN D++++KGC G KKRV+TLR+SLL SR ALE+I+LKFIDT+SKFGHGRFQT QE
Sbjct: 361 DVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRRALEDIELKFIDTTSKFGHGRFQTAQE 420
Query: 380 K 380
K
Sbjct: 421 K 421
>gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 428
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/383 (62%), Positives = 297/383 (77%), Gaps = 14/383 (3%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
G L F P + S F DPSKP LTAFLGYKAGMTHIVR+V+ PGSK++KKE
Sbjct: 44 GPLRFRPSRLLS------APFISLDPSKPVHLTAFLGYKAGMTHIVREVDWPGSKVNKKE 97
Query: 72 TCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFT 131
EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYKNW KSKKKAFT
Sbjct: 98 VVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFT 157
Query: 132 KYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSV 191
KY KK++ D GK+ + MKKYC VI VLAHTQ+R + L+QKKAHLMEIQVNGG+V
Sbjct: 158 KYCKKWQDDAGKRQLDKDFSSMKKYCLVISVLAHTQMRLLP-LQQKKAHLMEIQVNGGTV 216
Query: 192 AQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK 251
A+K+D+A E+Q+P+ VF +D+MID+IGVTKGKGY+GV +RW +L RKTHRGLRK
Sbjct: 217 AEKLDWAQERLEQQVPVSQVFGQDKMIDVIGVTKGKGYKGVTSRWHTKKLLRKTHRGLRK 276
Query: 252 VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRT 305
VACIGAWHPA V+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T +D +
Sbjct: 277 VACIGAWHPAHVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTNYDLS 336
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
+K I P+GGF HY V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT
Sbjct: 337 DKSINPLGGFVHYREVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDT 396
Query: 366 SSKFGHGRFQTTQEKAKYYGRLK 388
+SKFGHGRFQT ++KA + G LK
Sbjct: 397 TSKFGHGRFQTVEKKA-FMGPLK 418
>gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum]
Length = 455
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/368 (63%), Positives = 289/368 (78%), Gaps = 7/368 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRK+A+R G VK+FPKDD SKP LTAF+GYKAGMTHIVRD+
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKKANRLLGHVKSFPKDDRSKPVHLTAFIGYKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EK GSK+HKKE EAVTIIETPP+VVVG+VGY +T +GLR+ TVWAQHL+ E RR FYK
Sbjct: 61 EKLGSKMHKKEIVEAVTIIETPPMVVVGLVGYTETLKGLRAYKTVWAQHLSNEFRRHFYK 120
Query: 121 NWCKSKKK-AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
+WCKSK K AFTKY+KK+E +G I +E +K+ C +IRV+AH+Q K+ L QKKA
Sbjct: 121 SWCKSKNKLAFTKYSKKFE--EGTIKISNAVEAIKRKCAIIRVIAHSQPAKVAALHQKKA 178
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H++EIQ+NGGS+A K+ +A FEK I I++VF ++EM+D+I VTKGKG++GVV RWGV
Sbjct: 179 HMLEIQLNGGSIADKLKWAVDMFEKTISIESVFAENEMLDVISVTKGKGFQGVVKRWGVK 238
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES---- 295
+LPRKTH+GLRKVACIGAWHP+RVS TV RAGQ G+ HR E NKKIY++GKA +
Sbjct: 239 KLPRKTHKGLRKVACIGAWHPSRVSTTVPRAGQMGFFHRVETNKKIYRIGKAQPTTGPKI 298
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
+ TEFD T K ITPMGGF +YGVV +++++KGC GP KRV+TLR+S+ +R L
Sbjct: 299 PTGATEFDITAKTITPMGGFLNYGVVRNEFIMVKGCVGGPAKRVITLRKSIRPNVTRAGL 358
Query: 356 EEIKLKFI 363
E+IK + I
Sbjct: 359 EKIKFERI 366
>gi|71984544|ref|NP_001021255.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
gi|51011806|emb|CAH10799.1| Protein RPL-3, isoform c [Caenorhabditis elegans]
Length = 353
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/391 (58%), Positives = 286/391 (73%), Gaps = 52/391 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+ GV GYV TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQ------------- 167
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
MID IGVT+G G++GV +RW +
Sbjct: 168 ------------------------------------MIDTIGVTRGHGFKGVTSRWHTKK 191
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHS 297
LPRKTH+GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++
Sbjct: 192 LPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNN 251
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD T+K ITPMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+
Sbjct: 252 GSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEK 311
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LK+IDTSSK GHGRFQTT EK + G+LK
Sbjct: 312 INLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
>gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1]
Length = 419
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/393 (62%), Positives = 299/393 (76%), Gaps = 7/393 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP+KR HRG++++FPK+ LTAFLGYKAGMTHIVRD++
Sbjct: 21 SHRKFRAPRHGHLGFLPKKRCKHHRGQIRSFPKEQKGDKPHLTAFLGYKAGMTHIVRDLD 80
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+ GS HKKE EAVT++ETPP+VVVGVVGY TPRGLR L TVWA H+ E RR YK+
Sbjct: 81 RTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATHMAEGFIRRCYKH 140
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
+ SKK AF KY K T +G++ L +M KYC+VIRV+ HTQ++K+ L QKKAH+
Sbjct: 141 FAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMKKLN-LGQKKAHV 199
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGGS+ +KVDFA EK++PI VF ++E IDIIGVTKG G+EGV RWG +L
Sbjct: 200 MEIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKL 259
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------S 295
PRKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKKIY++G E +
Sbjct: 260 PRKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIGAGYHEKDGKLVT 319
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
+A+ E D TEK I PMGGFPHYG+V ED+L+IKGC VG KKRV+TLR+S+L TSR A
Sbjct: 320 ANAVCEADPTEKSINPMGGFPHYGLVKEDFLIIKGCTVGTKKRVLTLRKSILPDTSRRAQ 379
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
EE+ LKFIDTSSKFGHGRFQT +EK + G+LK
Sbjct: 380 EEVTLKFIDTSSKFGHGRFQTGEEKLGFMGKLK 412
>gi|426255009|ref|XP_004021160.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like [Ovis
aries]
Length = 491
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/391 (61%), Positives = 297/391 (75%), Gaps = 20/391 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 98 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 157
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV A HL++E RRRFYK
Sbjct: 158 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYV-------------AXHLSDECRRRFYK 204
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 205 DWHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 263
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGG+VA+KV + EKQ+P+ +VF ++E+ID+I VTKG+G +GV +RW +
Sbjct: 264 IMEVQLNGGTVAEKVAWVQARLEKQVPVHSVFSQNEVIDVIAVTKGRGVKGVTSRWHTKK 323
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHH TE+NKKIY++G+
Sbjct: 324 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHLTELNKKIYRIGRGLHTEDGKVV 383
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A
Sbjct: 384 KNNASTSYDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQA 443
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
LE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 444 LENIELKFIDTTSKFGHGRFQTAQEKRAFMG 474
>gi|384488486|gb|EIE80666.1| 60S ribosomal protein L3 [Rhizopus delemar RA 99-880]
Length = 341
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/342 (68%), Positives = 285/342 (83%), Gaps = 4/342 (1%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMTHIVRD+E+PGSK+HKKE EAVT+IE P +VVVGVVGYV+TPRGLRSL TVW
Sbjct: 1 MGYKAGMTHIVRDLERPGSKMHKKEIVEAVTVIEAPAMVVVGVVGYVETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL+EE +RRFYKNW +SKKKAFTKY +KY +G KD+ +LE++KKYC+V+RV+AHT
Sbjct: 61 AEHLSEEAKRRFYKNWYRSKKKAFTKYAQKYA--EGAKDVTRELERIKKYCSVVRVIAHT 118
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
QI K K L Q+KAH+MEIQ+NGGSV QKVD+A FEK++ + ++F++DEMIDII TKG
Sbjct: 119 QISKAK-LHQRKAHIMEIQLNGGSVEQKVDWAREHFEKEVTVGSIFEQDEMIDIIATTKG 177
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
G+EGV RWG +LPRKTHRGLRKVACIGAWHP+RV ++VARAGQ GYH RTE+NKKIY
Sbjct: 178 HGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPSRVMYSVARAGQRGYHRRTEINKKIY 237
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++ + ++ S TE+D TEK ITPMGGFPHYG VNED+++IKGCC G KKRV+TLR+SL
Sbjct: 238 RIATGA-DAKSGTTEYDLTEKQITPMGGFPHYGEVNEDFVMIKGCCAGAKKRVITLRKSL 296
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
T R ALE++ LKFIDTSSKFGHGRFQT EK ++ G LK
Sbjct: 297 TVHTKRSALEKVTLKFIDTSSKFGHGRFQTPAEKHQFMGTLK 338
>gi|429862403|gb|ELA37055.1| 60s ribosomal protein l3 [Colletotrichum gloeosporioides Nara gc5]
Length = 345
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/342 (65%), Positives = 282/342 (82%), Gaps = 3/342 (0%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMT IVRD+++PG+K +KKE EAV+II+TPP++VVG+VGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTIVRDLDRPGAKANKKEVVEAVSIIDTPPVIVVGIVGYIETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL++E+RRRFYKNW KSKKKAFTKY K++ G +I ++E++KKYCTV+RVLAHT
Sbjct: 61 AEHLSDELRRRFYKNWYKSKKKAFTKYAKQHAESSGA-NITREIERIKKYCTVVRVLAHT 119
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
QIRK LKQKKAHLMEIQ+NGGSV +KVDF YG FEK + + +VF+KDE+ID+I VTKG
Sbjct: 120 QIRKTP-LKQKKAHLMEIQINGGSVPEKVDFGYGLFEKPVEVSSVFEKDEVIDVIAVTKG 178
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
KG+ GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y
Sbjct: 179 KGFNGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVY 238
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++GK + ++A TE D T+K ITP+GGF YG V D++++KG GPKKRVVTLR+S+
Sbjct: 239 RIGKGDADDNAA-TELDVTKKTITPLGGFVRYGEVKNDFVMVKGSIPGPKKRVVTLRKSM 297
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
TSR ALE+I LK+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 298 WTHTSRKALEKIDLKWIDTSSEFGHGAFQTPAEKKQYQGTLK 339
>gi|157874311|ref|XP_001685639.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876054|ref|XP_001686391.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876056|ref|XP_001686392.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876058|ref|XP_001686393.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|157876060|ref|XP_001686394.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major]
gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
Length = 419
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/391 (58%), Positives = 296/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AF++ + T +GK L K +VIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQVNGGSVA K+ A EK++ +D+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRQLKEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK +++G LK
Sbjct: 361 IVLKFIDTSSKIGHGRFQTKKEKNQWFGPLK 391
>gi|146097010|ref|XP_001468006.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/391 (58%), Positives = 296/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AF++ + T +GK L K +VIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQVNGGSVA K+ A EK++ +D+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRHLKEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK +++G LK
Sbjct: 361 IVLKFIDTSSKIGHGRFQTKKEKNQWFGPLK 391
>gi|401428725|ref|XP_003878845.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401428727|ref|XP_003878846.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/391 (57%), Positives = 297/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AF++ + T +G+ L K +VIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRIAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG+VA K+ A EK++ +D+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRQLKEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK++++G LK
Sbjct: 361 IVLKFIDTSSKIGHGRFQTKKEKSQWFGPLK 391
>gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli]
Length = 416
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/391 (57%), Positives = 296/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ +KAGMTHIVRD+
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRCRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+ +VGV GY +T G + + TVWA H+++E RRR+YK
Sbjct: 61 DRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTVWAHHVSQEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + +GK Q L+ +K TVIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAHTQLRKLRNHRVGNKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQVNGG++ K+ A EK++ ID++FQ+ E D+ VTKG G+EGVV RWGV
Sbjct: 181 AHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAVTKGHGFEGVVHRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ-ESHS 297
LPRK+HRGLRKVACIGAWHPARV +TVARAGQNGYHHRT +NKKIY++G++S +
Sbjct: 241 ACLPRKSHRGLRKVACIGAWHPARVMYTVARAGQNGYHHRTHLNKKIYRIGRSSSVDPKQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D TEK ITPMGGF YG V D++++KG GP++RVVTLR+ + QTSR E+
Sbjct: 301 ATTTYDLTEKVITPMGGFVGYGTVRNDFIMLKGSVAGPRRRVVTLRRPMAPQTSRALTEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTS+K GHGRFQT +EK++++G +K
Sbjct: 361 IVLKFIDTSAKMGHGRFQTKKEKSQWFGPMK 391
>gi|378726960|gb|EHY53419.1| 60S ribosomal protein L3 [Exophiala dermatitidis NIH/UT8656]
Length = 346
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/342 (64%), Positives = 283/342 (82%), Gaps = 3/342 (0%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMT IVRD+++PG+K+HKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVW
Sbjct: 1 MGYKAGMTTIVRDLDRPGAKMHKKEIVEAVTVIETPPMIVVGLVGYIETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL +E++RRFYKNW +SKKKAFTKY KKY +++ + +LE++KKYCTV+RVLAHT
Sbjct: 61 AEHLGDELKRRFYKNWYRSKKKAFTKYAKKY-SENKSTSVTRELERIKKYCTVVRVLAHT 119
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
QIR+ LKQKKAHLMEIQ+NGGS+A KV+F +G FEK + ID +F++DEMID I VTKG
Sbjct: 120 QIRQTP-LKQKKAHLMEIQINGGSIADKVEFGHGLFEKPVEIDTIFEQDEMIDCIAVTKG 178
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
G++GV +RWG +LPRKTH+GLRKVACIGAWHP+ V +TVARAGQ+GYHHRT +N K+Y
Sbjct: 179 HGFQGVTSRWGTKKLPRKTHKGLRKVACIGAWHPSHVQWTVARAGQDGYHHRTSVNHKVY 238
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++GK + E ++A T+FD K ITPMGGF YG + D++L+KG G KKRV+TLR+S+
Sbjct: 239 RIGKGNDEKNAA-TDFDIVNKQITPMGGFVRYGEIKNDFVLVKGSVPGVKKRVITLRKSM 297
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
TSR ALE+++LK+IDTSSKFGHG +QT QEK ++ G LK
Sbjct: 298 FPHTSRKALEKVELKWIDTSSKFGHGAYQTPQEKRQFLGTLK 339
>gi|146097013|ref|XP_001468007.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|146099403|ref|XP_001468635.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/391 (58%), Positives = 296/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AF++ + T +GK L K +VIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG+VA K+ A EK++ +D+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRHLKEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK +++G LK
Sbjct: 361 IVLKFIDTSSKIGHGRFQTKKEKNQWFGPLK 391
>gi|401427361|ref|XP_003878164.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/391 (57%), Positives = 297/391 (75%), Gaps = 3/391 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRTRAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AF++ + T +G+ L K +VIRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFSRQKQFANTKEGRVVEARTLNAFAKKASVIRVIAHTQLRKLRNHRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG+VA K+ A EK++ +D+VFQ+ E D+ VTKG G EGVV RWGV
Sbjct: 181 AHVQEIQINGGNVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSVTKGHGTEGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHS 297
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT++NKKIY++G++ + E +
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQ 300
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+
Sbjct: 301 ATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRRVMTLRRPMAPQTSRQLKEK 360
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
I LKFIDTSSK GHGRFQT +EK++++G LK
Sbjct: 361 IVLKFIDTSSKIGHGRFQTKKEKSQWFGPLK 391
>gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar]
gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar]
Length = 409
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/394 (61%), Positives = 312/394 (79%), Gaps = 7/394 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GFLP KR+ +HRGK +++P+DDPS+P LTAF+GYKAGMTHI+R+V
Sbjct: 1 MSHRKFHAPRHGHMGFLPCKRSKKHRGKPRSWPQDDPSQPVHLTAFMGYKAGMTHILREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ G K K+E+ EAVTIIETPP++VVGVVGY+ T RGLRS T++A+HL++E +RRFYK
Sbjct: 61 HRTGLKQAKRESVEAVTIIETPPVMVVGVVGYIDTVRGLRSFKTIFAEHLSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAFTKY KK+ + GKK ++ MKKYCT IRVL HTQIR + LK KKAH
Sbjct: 121 SWYKSKKKAFTKYAKKWTDESGKKQLEKDFNNMKKYCTSIRVLIHTQIRLLP-LKAKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGG++++KVD+ E+ +P+ +VF +DEMID+IGVTKG G +GV +RWGV +
Sbjct: 180 IMEVQLNGGTISEKVDWVKEKLEQPVPVSSVFYQDEMIDVIGVTKGHGMKGVTSRWGVKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHP+RV +T+ARAGQ GYHHRTE+NKKIY++GK
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVGYTIARAGQKGYHHRTELNKKIYRIGKGIHVQDGKVI 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T+K ITPMGGFPHYG V D+L++KGC +G +KRV+TLR+S+L TSR +
Sbjct: 300 KNNASTNYDTTQKTITPMGGFPHYGDVKNDFLMLKGCVIGCRKRVLTLRKSMLVHTSRKS 359
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E I LKFIDT+SKFG+G FQT QEK + G LK
Sbjct: 360 KETIDLKFIDTTSKFGYGHFQTPQEKRAFMGPLK 393
>gi|255636886|gb|ACU18776.1| unknown [Glycine max]
Length = 257
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/257 (90%), Positives = 251/257 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKD+PS+PC LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDNPSQPCGLTAFVGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLR+L TVWAQHL+EEV+RRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRTLNTVWAQHLSEEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NWCKSKKKAFTKY+KKYET++GKKDI++QLEK+KKY TVIRVLAHTQIRK+KGLKQKKAH
Sbjct: 121 NWCKSKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKLKGLKQKKAH 180
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+V QKVD+AY FFEKQIP+DAVF KDEMIDI+GVTKGKGYEGVVTRWGVTR
Sbjct: 181 LMEIQVNGGTVDQKVDYAYSFFEKQIPVDAVFHKDEMIDIVGVTKGKGYEGVVTRWGVTR 240
Query: 241 LPRKTHRGLRKVACIGA 257
LPRKTHRGLRKVACIGA
Sbjct: 241 LPRKTHRGLRKVACIGA 257
>gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome
Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
At 8.9a Resolution
Length = 362
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/366 (66%), Positives = 298/366 (81%), Gaps = 4/366 (1%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K+E PRHG LGFLPRKRA+ R +VKAFPKDD SKP LT+FLGYKAGMT IVRD+++PG
Sbjct: 1 KYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPG 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
SK HK+E EAVT+++TPP+VVVGVVGYV+TPRGLRSL TVWA+HL++EV+RRFYKNW K
Sbjct: 61 SKFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYK 120
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFTKY+ KY D I+ +L ++KKY +V+RVL HTQIRK L QKKAHL EI
Sbjct: 121 SKKKAFTKYSAKYAQDGA--GIERELARIKKYASVVRVLVHTQIRKTP-LAQKKAHLAEI 177
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
Q+NGGS+++KVD+A FEK + +D+VF+++EMID I VTKG G+EGV RWG +LPRK
Sbjct: 178 QLNGGSISEKVDWAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRK 237
Query: 245 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
THRGLRKVACIGAWHPA V ++VARAGQ GYH RT +N KIY++GK E++ A T FDR
Sbjct: 238 THRGLRKVACIGAWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGA-TSFDR 296
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
T+K ITPMGGF HYG + D++++KGC G +KR+VTLR+SL TSR ALEE+ LK+ID
Sbjct: 297 TKKTITPMGGFVHYGEIKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWID 356
Query: 365 TSSKFG 370
T+SKFG
Sbjct: 357 TASKFG 362
>gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
Length = 345
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/339 (66%), Positives = 286/339 (84%), Gaps = 3/339 (0%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
+GYKAGMTHIVRD+++PGSK HK+E EA T+IETPP+VVVG+VGYV+TPRGLRSL TVW
Sbjct: 1 MGYKAGMTHIVRDLDRPGSKYHKREIVEATTVIETPPMVVVGMVGYVETPRGLRSLTTVW 60
Query: 107 AQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
A+HL++EV+RRFYKNW +SKKKAFTKY KK+ ++G+ I +LE+++KYC+V+RVLAHT
Sbjct: 61 AEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHSENNGQ-SIARELERIRKYCSVVRVLAHT 119
Query: 167 QIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKG 226
Q+R LKQKKAHLMEIQVNGGSV++KVDFA FEK + ++++F +DE++D+IGVTKG
Sbjct: 120 QLRNT-SLKQKKAHLMEIQVNGGSVSEKVDFANNLFEKTVDVNSLFTQDELVDVIGVTKG 178
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
KGYEGV RWG+T+LPRKTH+GLRKVACIGAWHPA V FTVAR+GQ+GYHHRTE+NKKIY
Sbjct: 179 KGYEGVTARWGITKLPRKTHKGLRKVACIGAWHPANVMFTVARSGQDGYHHRTELNKKIY 238
Query: 287 KLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++G + ++ S TEFD T+K ITPMGGFPHYG+V D+L+IKG C G KKRV+T+R+S
Sbjct: 239 RIGNGADKA-SGATEFDTTQKSITPMGGFPHYGIVKNDFLMIKGSCPGVKKRVLTIRKSQ 297
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
TSR +E++ LKFIDTSSKFGHG +QT E+ + G
Sbjct: 298 KIHTSREDVEKVTLKFIDTSSKFGHGNYQTGAERDAFEG 336
>gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
gi|355563684|gb|EHH20246.1| hypothetical protein EGK_03058 [Macaca mulatta]
gi|390407371|dbj|BAM21009.1| hypothetical protein, partial [Homo sapiens]
Length = 351
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/342 (65%), Positives = 283/342 (82%), Gaps = 7/342 (2%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTHIVR+V++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++
Sbjct: 1 MTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISD 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP 120
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGV 179
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-- 290
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 180 TSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGY 239
Query: 291 ----ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SL
Sbjct: 240 LIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSL 299
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
L QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 300 LVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 341
>gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 354
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 233/394 (59%), Positives = 285/394 (72%), Gaps = 56/394 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR SRH GKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRRSRHHGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+E PP+VVVG+ GYV+TPRGLR+ TV+A+H+ +E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFKTVFAEHMGDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KKAH
Sbjct: 121 NWHKSK--------------------------------------------------KKAH 130
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L EIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV + W +
Sbjct: 131 LTEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKK 190
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LPRKTHRGLRKVACIGA HPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 191 LPRKTHRGLRKVACIGARHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLI 250
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KK+V+TLR+SLL QT R A
Sbjct: 251 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKQVLTLRKSLLVQTKRRA 310
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 311 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 344
>gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus]
Length = 358
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/349 (64%), Positives = 286/349 (81%), Gaps = 8/349 (2%)
Query: 47 LGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP-LVVVGVVGYVKTPRGLRSLCTV 105
LGYKAGMTHIVR+V++PGSK++KKE EAVTI+ETPP +VVVG+VGYV+TP+GLR+ TV
Sbjct: 1 LGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPPMVVVGIVGYVETPQGLRTFKTV 60
Query: 106 WAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAH 165
+A+H+++E +R FYKNW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AH
Sbjct: 61 FAEHISDECKRHFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAH 120
Query: 166 TQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 225
TQ+R + L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTK
Sbjct: 121 TQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTK 179
Query: 226 GKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKI 285
GKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKI
Sbjct: 180 GKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKI 239
Query: 286 YKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRV 339
YK+G+ ++A T++D ++K I P+GGF HYG + D++++KGC VG KKRV
Sbjct: 240 YKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEMTNDFIMLKGCVVGTKKRV 299
Query: 340 VTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+SLL QT ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 300 LTLRKSLLVQTKCRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 348
>gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana]
Length = 257
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 215/253 (84%), Positives = 241/253 (95%)
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK+ET++GKKDIQ+QLEKMKKYC+VIRVLAHTQIRKMKGLKQKKAHL EIQ+NGG +A+
Sbjct: 1 SKKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAK 60
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KVD+A FEKQ+P+DA+FQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA
Sbjct: 61 KVDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 120
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
CIGAWHPARVS+TVARAGQNGYHHRTEMNKK+Y++GK QE+HSAMTE+DRTEKDITPMG
Sbjct: 121 CIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMG 180
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGR 373
GFPHYG+V EDYL+IKGCCVGPKKRVVTLRQ+LLKQTSRL +EEIKLKFID +S GHGR
Sbjct: 181 GFPHYGIVKEDYLMIKGCCVGPKKRVVTLRQTLLKQTSRLTMEEIKLKFIDAASNGGHGR 240
Query: 374 FQTTQEKAKYYGR 386
FQT+QEKAK+YGR
Sbjct: 241 FQTSQEKAKFYGR 253
>gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis]
Length = 263
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/261 (85%), Positives = 241/261 (92%), Gaps = 1/261 (0%)
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AFTKY+ KYE+DDGKK+IQ QL+KMKKY TVIRVLAHTQ+RKMKGLKQKKAHLMEIQVNG
Sbjct: 4 AFTKYSNKYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNG 63
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G++A+KVD+AYGFFEKQIP+DAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG
Sbjct: 64 GTIAEKVDYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 123
Query: 249 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
LRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIY+LGK+ ESH A+TEFDRTEKD
Sbjct: 124 LRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYRLGKSGDESHQAVTEFDRTEKD 183
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 368
ITPMGGFPHYGVVN+DY+LI GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS
Sbjct: 184 ITPMGGFPHYGVVNDDYILINGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSN 243
Query: 369 FGHGRFQTTQEKAKYYGRLKA 389
+ E A+ GRLKA
Sbjct: 244 LVMAASRPPGE-AQVSGRLKA 263
>gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens]
Length = 343
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/339 (64%), Positives = 280/339 (82%), Gaps = 7/339 (2%)
Query: 56 IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
IVR+V++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +
Sbjct: 1 IVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECK 60
Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK 175
RRFYKNW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+
Sbjct: 61 RRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LR 119
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +R
Sbjct: 120 QKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSR 179
Query: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK----- 290
W +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 180 WHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIK 239
Query: 291 -ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL Q
Sbjct: 240 DGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQ 299
Query: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
T R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 300 TKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 338
>gi|440292698|gb|ELP85882.1| 60S ribosomal protein L3, putative [Entamoeba invadens IP1]
Length = 402
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/388 (58%), Positives = 284/388 (73%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL F PRKR R R AFPKD + LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHRLRAATSAFPKDKTTDKPHLTGFLGFKAGMTHVIREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ +KL K E VTIIETPP+V VG VGY KT +GLR + V+A+H+++E +RR+ K
Sbjct: 61 KRTNTKLPKDGILEPVTIIETPPMVCVGFVGYRKTVKGLRQMSVVFAEHISDEFKRRYSK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS ++ F +T+ Y K + ++ MK IR++AHTQ+ + LKQKKA
Sbjct: 121 NWKKSNRRQFAVHTETYNDVKVKAKRERIIKMMKNNADFIRIIAHTQM-ALVPLKQKKAE 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQVNGGS+A K+DFA G EKQI +D++F KDE IDI+ VTKG G+ GV+ R+GV
Sbjct: 180 VMEIQVNGGSIADKIDFATGLLEKQISVDSIFGKDEPIDIVAVTKGHGFNGVIKRFGVRH 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVAC+GAWHPARV +TVARAGQ G+ RTE+NKKIY++G + +A T
Sbjct: 240 LPRKTHRGLRKVACVGAWHPARVGWTVARAGQMGFFKRTEVNKKIYRIGAGALR--NANT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD TEKDITPMGGFPHYG+V D+L+IKG C G +KRV+TLR++ T+R+A EEI L
Sbjct: 298 EFDFTEKDITPMGGFPHYGIVKNDFLMIKGTCAGIRKRVITLRKACNPSTTRIAQEEISL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK+GH RFQTT EK G +K
Sbjct: 358 KFIDTSSKYGHSRFQTTAEKKARLGAMK 385
>gi|399949966|gb|AFP65622.1| 60S ribosomal protein L3 [Chroomonas mesostigmatica CCMP1168]
Length = 388
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/387 (59%), Positives = 307/387 (79%), Gaps = 5/387 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLP+KR R +GK+K+FPKD + C LTA LGYKAGMTH+VR V
Sbjct: 1 MSHRKYESPRHGSLGFLPKKRCQRKKGKIKSFPKDSENSICHLTAALGYKAGMTHVVRTV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL-NEEVRRRFY 119
+K GSKLH K+ EAVTI+ETPPL ++G +GY+KTPRGLR+ T+W+ + EE RR FY
Sbjct: 61 DKLGSKLHGKDCVEAVTILETPPLEIIGYIGYIKTPRGLRAFRTIWSNSIFPEEFRRNFY 120
Query: 120 KNWCKSKKKAFTKYT--KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
KNW KSKKKAF+K T KK E + + + Q + ++KK+C+VIR ++ ++I K GLKQK
Sbjct: 121 KNWYKSKKKAFSKKTNLKKMEFNFIEIENQKKKFQIKKFCSVIRCISFSKISKT-GLKQK 179
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KA ++EIQVNGG+ +KVDF F K+I I +F++ E+ID++G+TKGKG+EGV++RWG
Sbjct: 180 KAKILEIQVNGGNSMEKVDFIEKMFNKEISISDIFKQREIIDVVGITKGKGFEGVISRWG 239
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
VT+LPRKTHRG RKVAC+G+WHP+R+SF V RAGQNGYHHRT+ N +IYK+GKAS + +
Sbjct: 240 VTKLPRKTHRGARKVACVGSWHPSRISFRVPRAGQNGYHHRTQNNIQIYKVGKAS-DPRN 298
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T+FD TEK ITPMGGFP+YG++ ED+L++KGC +G +KR +TLR+SL + + ++
Sbjct: 299 ASTDFDLTEKKITPMGGFPYYGIIKEDFLILKGCILGSRKRPITLRKSLSSKNDKFFGKK 358
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYY 384
I LKFIDTSSK+GHGRFQT+QEK + +
Sbjct: 359 IILKFIDTSSKWGHGRFQTSQEKIETF 385
>gi|395747312|ref|XP_003778589.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Pongo abelii]
Length = 402
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/393 (61%), Positives = 301/393 (76%), Gaps = 16/393 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK
Sbjct: 61 HRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+W KSKKKAF+K K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH
Sbjct: 121 DWHKSKKKAFSKACKRWRDPDGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +
Sbjct: 180 IMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGPHMEDGKLV 299
Query: 296 -HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T +D T K ITP+GGFPHYG VN D++++KG G KKRV+TLR+ RLA
Sbjct: 300 KNNASTSYDVTAKAITPLGGFPHYGEVNNDFVMLKGLIAGTKKRVITLRK-------RLA 352
Query: 355 LEEIKLK--FIDTSSKFGHGRFQTTQEKAKYYG 385
+ + L FIDT+SKFGHGRFQT QEK + G
Sbjct: 353 VAWVGLGEWFIDTTSKFGHGRFQTAQEKRAFMG 385
>gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea]
Length = 351
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/352 (65%), Positives = 287/352 (81%), Gaps = 7/352 (1%)
Query: 24 RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 83
RHRG++KAFPKDDPSKP LTAFLGYKAGMTHIVR+V++PGSK++KKE E V+++E PP
Sbjct: 1 RHRGQLKAFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEGVSVLEVPP 60
Query: 84 LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
LVVVGVVGYV TP+GLR+ T+WA+HL EE RRRFYKNW +SKKKAFTK +KK++ + GK
Sbjct: 61 LVVVGVVGYVATPKGLRTFNTIWAEHLGEECRRRFYKNWARSKKKAFTKASKKWQDETGK 120
Query: 144 KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFE 203
K+I+ L KMKKYC V+RVL HTQ + M +QKKAH++EIQ+NGGS+ K+D+A FE
Sbjct: 121 KEIEKDLSKMKKYCNVVRVLCHTQTKLM-NTRQKKAHIVEIQLNGGSIPDKIDWAKDHFE 179
Query: 204 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 263
K +P+ VF +DE+IDIIGVTKGKG +GV +RW +LPRKTH+GLRKVACIGAWHP+RV
Sbjct: 180 KTVPVQEVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRV 239
Query: 264 SFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFPH 317
++VARAGQ GYHHRTE+NKKIY+LG ++A TE+D TEK ITP+GGFPH
Sbjct: 240 QYSVARAGQKGYHHRTEINKKIYRLGSGVHTRDGKLVKNNASTEYDPTEKTITPVGGFPH 299
Query: 318 YGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKF 369
YG VN+DY+++KGC VGPKKRV+TLR+SLL + A+E+I KFIDTSSKF
Sbjct: 300 YGEVNQDYIMMKGCVVGPKKRVITLRKSLLTHFKKRAMEKIDXKFIDTSSKF 351
>gi|342180583|emb|CCC90059.1| putative ribosomal protein L3, mitochondrial [Trypanosoma
congolense IL3000]
Length = 428
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/392 (57%), Positives = 289/392 (73%), Gaps = 6/392 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGM-THIVRD 59
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKA H R
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAXYDAHCAR- 59
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+PGSK++KKE E VTI+E PP+VVVG VGY +TP G +++ TVWA H + E RRRFY
Sbjct: 60 -RRPGSKVNKKEVVEPVTILEAPPMVVVGFVGYRQTPVGHKTIGTVWAHHTSVEFRRRFY 118
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQK 177
KNW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + K
Sbjct: 119 KNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVK 178
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQ+NGG++AQK++ A EK++ ID+VFQ+ E D+ VTKG G+ GVV RWG
Sbjct: 179 KAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKGHGFTGVVKRWG 238
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESH 296
V LPRKTHRGLRKVACIGAWHP+RV +TVARAGQ+GYHHRT +NKKIY+LG+A S E +
Sbjct: 239 VACLPRKTHRGLRKVACIGAWHPSRVMYTVARAGQHGYHHRTHLNKKIYQLGRAVSMEPN 298
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
A T +D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E
Sbjct: 299 QATTSYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTE 358
Query: 357 EIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+I LKFIDTSSK GHGRFQT +EK+++YG LK
Sbjct: 359 KITLKFIDTSSKIGHGRFQTKKEKSQWYGPLK 390
>gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 402
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/388 (57%), Positives = 282/388 (72%), Gaps = 3/388 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ +KL K E VTIIETPP+VV G VGY KT GL+ + V+A+H+ +E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
W K+ K F +T+KY K + Q+ +K C V+RV+AHTQ+ + LKQKKA
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM-ALVPLKQKKAE 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+A+KVDFA EKQI +++VF DE ID+ VTKG GY GV+ R+GV
Sbjct: 180 VMEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRH 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+ RTE+NKKIY+LG + +A T
Sbjct: 240 LPRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLG--CGDLKNAKT 297
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
EFD TEK ITPMGGFPHYGVV D+L+IKG G ++RV++LR++ T+R A E+I L
Sbjct: 298 EFDITEKGITPMGGFPHYGVVKNDFLMIKGTVAGIRRRVISLRKACFPSTTRTAQEQIVL 357
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KFIDTSSK+GH RFQTT EK G +K
Sbjct: 358 KFIDTSSKYGHSRFQTTTEKKARMGPMK 385
>gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii]
gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii]
Length = 388
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/383 (59%), Positives = 296/383 (77%), Gaps = 5/383 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSLGFLP+KR R +GK+K+FPKD+ + PC LTA +G+KAGMTH+VR V
Sbjct: 1 MSHRKYEAPRHGSLGFLPKKRCRRGKGKIKSFPKDNENHPCHLTASIGFKAGMTHVVRTV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA-QHLNEEVRRRFY 119
+K GSKLH K+ EAVT+IETPPL +VG VGY+KTP+GLRS TVW+ + EE +R FY
Sbjct: 61 DKFGSKLHGKDVVEAVTVIETPPLQIVGFVGYIKTPKGLRSFRTVWSTNNFPEEFKRNFY 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEK--MKKYCTVIRVLAHTQIRKMKGLKQK 177
KNW KSK+KAF K K +G + Q K +KK+C +IR +A ++I K GLKQK
Sbjct: 121 KNWYKSKRKAFKKKQKTELEYNGFSVFENQKIKFQIKKFCPIIRCIAFSKISKT-GLKQK 179
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KA ++EIQ+NGG+ QK++F +K+I I +F++ E+ID IG+TKGKG++GV+ RWG
Sbjct: 180 KAPVLEIQINGGNTTQKINFVEKISQKEISISDIFRQREIIDTIGITKGKGFQGVIKRWG 239
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
VT+LPRKTHRG RKVAC+G+WHP+RVSF V RAGQ G+HHRT++N +IY++GKA +S++
Sbjct: 240 VTKLPRKTHRGARKVACVGSWHPSRVSFRVPRAGQTGFHHRTQINLQIYRVGKA-LDSNN 298
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD + K ITPMGGFP+YG V ED+LL+KGC +G KKR +TLR+SL ++ ++
Sbjct: 299 GSTEFDLSTKKITPMGGFPYYGNVKEDFLLLKGCVMGSKKRQITLRKSLSQKPQNFFNKK 358
Query: 358 IKLKFIDTSSKFGHGRFQTTQEK 380
I+LKFIDTSSK+GHGRFQT EK
Sbjct: 359 IQLKFIDTSSKWGHGRFQTKDEK 381
>gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3]
Length = 415
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/410 (55%), Positives = 294/410 (71%), Gaps = 26/410 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+P S+LHKKE CE VTI+ETPP+ VVG++GY T GL+ + TVWA ++NEEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRK--------- 170
NW +SK +KAF+ + + +K QLEK++K TVIRV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEKLQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 171 -------MKG--LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
+KG L QKKAH++EIQ+NGG VA K+++A EK+I + VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 281
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 282 NKKIYKLGKASQE---SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
NK+IY++G A E + T FD T+K I PMGGFPHYG+V +D+L+IKG VG KR
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINPMGGFPHYGLVKDDFLMIKGSVVGTVKR 356
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+++ T R+A EEI LK+IDT+SKFGHGRFQT +E++K+ G+LK
Sbjct: 357 AITLRKTININTRRIATEEINLKWIDTASKFGHGRFQTKEERSKFLGKLK 406
>gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3]
Length = 415
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/410 (54%), Positives = 294/410 (71%), Gaps = 26/410 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+P S+LHKKE CE VTI+ETPP+ VVG++GY T GL+ + TVWA ++NEEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTIEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRK--------- 170
NW +SK +KAF+ + + +K QLE+++K TVIRV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 171 -------MKG--LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
+KG L QKKAH++EIQ+NGG VA K+++A EK+I + VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 281
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 282 NKKIYKLGKASQE---SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
NK+IY++G A E + T FD T+K I PMGGFPHYG+V +D+L+IKG VG KR
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINPMGGFPHYGLVKDDFLMIKGSVVGTVKR 356
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+++ T R+A EEI LK+IDT+SKFGHGRFQT +E++K+ G+LK
Sbjct: 357 AITLRKTININTRRIATEEINLKWIDTASKFGHGRFQTKEERSKFLGKLK 406
>gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3]
gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3]
gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3]
Length = 415
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/410 (54%), Positives = 294/410 (71%), Gaps = 26/410 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+P S+LHKKE CE VTI+ETPP+ VVG++GY T GL+ + TVWA ++NEEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRK--------- 170
NW +SK +KAF+ + + +K QLE+++K TVIRV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 171 -------MKG--LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
+KG L QKKAH++EIQ+NGG VA K+++A EK+I + VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 281
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 282 NKKIYKLGKASQE---SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
NK+IY++G A E + T FD T+K I PMGGFPHYG+V +D+L+IKG VG KR
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINPMGGFPHYGLVKDDFLMIKGSVVGTVKR 356
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+++ T R+A EEI LK+IDT+SKFGHGRFQT +E++K+ G+LK
Sbjct: 357 AITLRKTININTRRIATEEINLKWIDTASKFGHGRFQTKEERSKFLGKLK 406
>gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus
cuniculus]
Length = 351
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/394 (56%), Positives = 282/394 (71%), Gaps = 59/394 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRK +S+HRGKV PKDDPSKP LTAFLGYKAG+THIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPRKCSSQHRGKV---PKDDPSKPVHLTAFLGYKAGLTHIVQEV 57
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGS+++KKE EAVTI+ETPP+VV+G+VGYV+TPRGLR+ ++A+H++++ +RRFYK
Sbjct: 58 DRPGSEVNKKEVVEAVTIVETPPMVVMGIVGYVETPRGLRTFKMMFAEHISDKCKRRFYK 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK KKAH
Sbjct: 118 NWHKSK--------------------------------------------------KKAH 127
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P+ VF +DEMID+IGVTKGKGY+ V +RW +
Sbjct: 128 LMEIQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKK 187
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQE 294
LP KTHRGLRKVACIGAWHPARV+F+VA AGQ GYHHRTE+NKKIYK+G+
Sbjct: 188 LPHKTHRGLRKVACIGAWHPARVAFSVAWAGQKGYHHRTEINKKIYKIGQGYLIKDRKLI 247
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TL +SL QT R A
Sbjct: 248 KNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLHKSLQVQTKRRA 307
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHG FQT +EKA + G LK
Sbjct: 308 LEKIDLKFIDTTSKFGHGCFQTVEEKAAFMGPLK 341
>gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens]
Length = 286
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/284 (73%), Positives = 251/284 (88%), Gaps = 1/284 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 284
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKK
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKK 283
>gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3]
Length = 415
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/410 (54%), Positives = 293/410 (71%), Gaps = 26/410 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PR GSLGFLPR R+ RG+V+++PKDD S+ L AF+GYKAGMTH++RDV
Sbjct: 1 MSHRKFNAPRRGSLGFLPRGRSHAVRGRVRSWPKDDASQKPHLCAFIGYKAGMTHVLRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+P S+LHKKE CE VTI+ETPP+ VVG++GY T GL+ + TVWA ++NEEV+R +YK
Sbjct: 61 VRPNSRLHKKEACEPVTILETPPMFVVGIIGYKPTVEGLKPVTTVWASYVNEEVKRNYYK 120
Query: 121 NWCKSK-KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRK--------- 170
NW +SK +KAF+ + + +K QLE+++K TVIRV+AHTQ K
Sbjct: 121 NWYQSKARKAFSCLSNGKAAEKREK----QLEELQKEATVIRVIAHTQSAKTTTRGVDAN 176
Query: 171 -------MKG--LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
+KG L QKKAH++E Q+NGG VA K+++A EK+I + VF + E ID I
Sbjct: 177 EQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNYAKSILEKEIKVADVFTEGEQIDTI 236
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEM 281
GV KG G+EGV+ R+G RL +KTHRG RKVACIG W+PARV ++VAR GQ G HHRTEM
Sbjct: 237 GVGKGFGWEGVIHRYGTKRLQKKTHRGRRKVACIGPWNPARVLWSVARYGQRGCHHRTEM 296
Query: 282 NKKIYKLGKASQE---SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
NK+IY++G A E + T FD T+K I PMGGFPHYG+V +D+L+IKG VG KR
Sbjct: 297 NKRIYRIGAAEVEGKINEGGSTSFDLTKKSINPMGGFPHYGLVKDDFLMIKGSVVGTVKR 356
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+++ T R+A EEI LK+IDT+SKFGHGRFQT +E++K+ G+LK
Sbjct: 357 AITLRKTININTRRIATEEINLKWIDTASKFGHGRFQTKEERSKFLGKLK 406
>gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus]
Length = 319
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/320 (65%), Positives = 265/320 (82%), Gaps = 7/320 (2%)
Query: 56 IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
IVR+VEKPGSKL+KKE EAVTIIETPPLV+VGV+GY++TPRGLR+L TV+A+HL+E+ R
Sbjct: 1 IVREVEKPGSKLNKKEVVEAVTIIETPPLVIVGVIGYIETPRGLRTLKTVFAEHLSEDCR 60
Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK 175
RRFYKNW K+K+KAFTKY KK++ + GKK I + EKMKKYCTVIRV+AHTQ++ ++ +
Sbjct: 61 RRFYKNWYKAKRKAFTKYAKKWQDEVGKKQIDREFEKMKKYCTVIRVVAHTQMKLLRK-R 119
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
QKKAH+MEIQ+NGG++A+KV +A EK +PI +VF DEMID++GVTKG G++GV +R
Sbjct: 120 QKKAHIMEIQLNGGTIAEKVQWACDHLEKAVPISSVFAADEMIDMVGVTKGHGFKGVTSR 179
Query: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE- 294
W +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKK+Y++ +
Sbjct: 180 WHCKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKVYRIAEGIHTK 239
Query: 295 -----SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
++A T+FD ++K ITPMGGFPHYG V D+++IKGCC+GPKKR++TLR+SLL
Sbjct: 240 DGKVIKNNAATDFDLSDKSITPMGGFPHYGEVRNDFIMIKGCCMGPKKRIITLRKSLLTH 299
Query: 350 TSRLALEEIKLKFIDTSSKF 369
T R+A E I LKFIDTSSKF
Sbjct: 300 TKRVAAEHITLKFIDTSSKF 319
>gi|293335791|ref|NP_001168481.1| uncharacterized protein LOC100382258 [Zea mays]
gi|223948579|gb|ACN28373.1| unknown [Zea mays]
gi|413919530|gb|AFW59462.1| hypothetical protein ZEAMMB73_132937 [Zea mays]
Length = 253
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/237 (86%), Positives = 225/237 (94%), Gaps = 1/237 (0%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
++KY +VIRV+AHTQIRKMKGLKQKKAHLMEIQVNGG++A KVD+ Y FFE ++P+DAVF
Sbjct: 18 LRKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFE-EVPVDAVF 76
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQ
Sbjct: 77 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQ 136
Query: 273 NGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCC 332
NGYHHRTEMNKK+YK+GKA QESH A TEFDRTEKDITPMGGFPHYG++ DYL+IKGCC
Sbjct: 137 NGYHHRTEMNKKVYKIGKAGQESHDASTEFDRTEKDITPMGGFPHYGIIKGDYLMIKGCC 196
Query: 333 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 197 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLKA 253
>gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus]
Length = 313
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/314 (64%), Positives = 260/314 (82%), Gaps = 1/314 (0%)
Query: 56 IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
I+R++ +PGSK HK E EAVTIIETPP++VVGVVGY++TPRGLR + T++AQHLN+E R
Sbjct: 1 ILREMNRPGSKSHKHEVVEAVTIIETPPMMVVGVVGYIETPRGLRPIKTIFAQHLNDECR 60
Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK 175
RRFYKNW SKKKAF+K + +++ + G+K IQA +K+KKYC VIRV+ HTQ+ + G++
Sbjct: 61 RRFYKNWFNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVICHTQVELLNGVR 120
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
QKKAH+MEIQVNGGS++ KVD+A EK IPI +F KDEMIDIIGVTKGKG++GV +R
Sbjct: 121 QKKAHIMEIQVNGGSISDKVDWAKEHMEKAIPIKDLFNKDEMIDIIGVTKGKGFKGVTSR 180
Query: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 295
W +LPRKTH+GLRKVACIGAWHP+RVSF+VARAGQ GYHHRTE+NKKIY++G +++
Sbjct: 181 WHCKKLPRKTHKGLRKVACIGAWHPSRVSFSVARAGQKGYHHRTEINKKIYRIGD-KEDN 239
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
+A TEFD TEK ITP+GGFPHYG V D++++KG VGPK+RV+T+R+SL+ +R
Sbjct: 240 ANAATEFDPTEKRITPVGGFPHYGTVKNDFVMLKGAVVGPKRRVITMRKSLVVNVTRKNK 299
Query: 356 EEIKLKFIDTSSKF 369
EE+KLKFIDTSSKF
Sbjct: 300 EEVKLKFIDTSSKF 313
>gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus]
Length = 303
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 199/291 (68%), Positives = 250/291 (85%), Gaps = 1/291 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF+P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSMGFVPKKRSKRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE E VTI+ETPP+V+VGVVGY++TP+GLR+L TVWA+HL+E+ +RRFYK
Sbjct: 61 DKPGSKVNKKEVVEPVTILETPPMVIVGVVGYIETPKGLRALKTVWAEHLSEDCKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY+KK+ + G+ I +KM KYC VIRV+AHTQ++ M+ +QKKAH
Sbjct: 121 NWYKSKKKAFTKYSKKWAEEAGRVAINKDFKKMAKYCKVIRVIAHTQMKLMRK-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGG+++QK+ +A EK +P+ VF +DEMID+IGVTKGKG++GV +RW +
Sbjct: 180 IMEIQLNGGNISQKIKWARDHLEKPVPLSQVFAQDEMIDVIGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY++G+
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEINKKIYRIGQG 290
>gi|402876884|ref|XP_003902181.1| PREDICTED: 60S ribosomal protein L3-like, partial [Papio anubis]
Length = 279
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/280 (72%), Positives = 246/280 (87%), Gaps = 1/280 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE 280
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH RTE
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHLRTE 279
>gi|426354157|ref|XP_004044534.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Gorilla gorilla
gorilla]
Length = 351
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/342 (61%), Positives = 269/342 (78%), Gaps = 7/342 (2%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTHI+R+V++P SK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H++
Sbjct: 1 MTHIMREVDRPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISN 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
E +RRFYKNW KSKKKAFTKY KK++ +D KK ++ MKKYC VIRV+AHTQ+R +
Sbjct: 61 ECKRRFYKNWHKSKKKAFTKYCKKWQDEDVKKQLEEDFSSMKKYCHVIRVIAHTQMRLLP 120
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L+QKKAHLMEIQVNGG+VA+K+D+ E+Q+ ++ VF +DEMID+IGVTKG GY+GV
Sbjct: 121 -LRQKKAHLMEIQVNGGTVAEKLDWVRERLEQQVNVNQVFGQDEMIDVIGVTKGNGYKGV 179
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK-- 290
+RW +LP KTHRGLRKVACIGAWHPARV+F+VARAGQ G HRTE+NKKIYK+G+
Sbjct: 180 TSRWHTKKLPLKTHRGLRKVACIGAWHPARVAFSVARAGQKGNRHRTEINKKIYKIGQGY 239
Query: 291 ----ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++A T+ D ++K P+GGF HYG V D++++KGC VG KKRV+TL +SL
Sbjct: 240 LIKDGKLIKNNASTDSDLSDKSTNPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLHESL 299
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
L Q R ALE+I LKFIDT+SKFGHG FQT ++K + G LK
Sbjct: 300 LVQMKRQALEKIDLKFIDTTSKFGHGCFQTMEQKKAFMGPLK 341
>gi|347964|gb|AAA91344.1| TARBP-b, partial [Homo sapiens]
Length = 277
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/278 (72%), Positives = 243/278 (87%), Gaps = 1/278 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRTSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +
Sbjct: 180 LMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHR 278
LPRKTHRGLRKVACIGAWHP RV+F+VARAGQ GYHHR
Sbjct: 240 LPRKTHRGLRKVACIGAWHPVRVAFSVARAGQKGYHHR 277
>gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta]
gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta]
Length = 375
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/384 (52%), Positives = 284/384 (73%), Gaps = 11/384 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M+HRKFE PRHGSL FLP+KR R GK+K+FPKDD + C LT +GYK+GMTH+ R V
Sbjct: 1 MAHRKFEAPRHGSLQFLPKKRCRRTVGKIKSFPKDDICQSCHLTGSIGYKSGMTHVERLV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ P SK++K+E +AVTI+ETPP+++VG VGY+KTP+G+RSL TVW ++E ++R +YK
Sbjct: 61 DLPNSKMNKREVIDAVTILETPPILIVGFVGYIKTPKGIRSLNTVWIDEVDESIKRNYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKK+FT Y K +++ E KYC+++R + ++I+K+ G K++K+
Sbjct: 121 NWYKSKKKSFTHYNKIV-------NLKKFKETYFKYCSILRCIISSEIKKI-GFKKRKSK 172
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
++EIQ+NGG K+D+ K+I ID +F ++E++DIIG++KGKG++GVV+RWGVT+
Sbjct: 173 ILEIQLNGGKPEHKLDYIEKILGKKITIDQIFSENELVDIIGISKGKGFQGVVSRWGVTK 232
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKTHRG RKVAC+G+WHP+RVSFTVARAGQ+GYHHRT +N KIY +GK S+ +T
Sbjct: 233 LPRKTHRGARKVACVGSWHPSRVSFTVARAGQSGYHHRTSLNIKIYAIGKDGFISNHILT 292
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+++ I PMGGFP YG+V D+L++KG VG KKR + LR+S+ K + E I L
Sbjct: 293 N-NKSNFSINPMGGFPFYGLVKSDFLILKGGIVGSKKRGLILRKSIHKNKN--FKENINL 349
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYY 384
FIDTSSK+GHG+FQ + EK ++
Sbjct: 350 TFIDTSSKWGHGKFQDSNEKKSFF 373
>gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003]
Length = 319
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/320 (62%), Positives = 262/320 (81%), Gaps = 7/320 (2%)
Query: 56 IVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
IVR+V+KPGS+ HKKE EA TI+ETPP++ VGVVGY++TPRGLR+ TVWA+HL++E R
Sbjct: 1 IVREVDKPGSRNHKKEVVEAATILETPPMIAVGVVGYIETPRGLRTFKTVWAEHLSDECR 60
Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK 175
RRFYKNWCKSKKKAF++ ++++ +D+GK I++ KM KYC VIR++A TQI K+ +
Sbjct: 61 RRFYKNWCKSKKKAFSRASQRWTSDEGKASIESDFAKMIKYCKVIRLIARTQI-KLVPIS 119
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
QKKAHLMEIQ+NGGS+A K+++A EK + ++ VF +DEMID+IGVT+GKG++GV +R
Sbjct: 120 QKKAHLMEIQINGGSIADKINYARERLEKHMHVNKVFGQDEMIDVIGVTRGKGFKGVTSR 179
Query: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 295
W +LPRKTH+GLRKVACIGAWHP+RV ++VARAGQ GYHHRTE+NKK+Y++G +
Sbjct: 180 WHCKKLPRKTHKGLRKVACIGAWHPSRVQYSVARAGQKGYHHRTEVNKKVYRVGAGYHQE 239
Query: 296 ------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
++A T FD T+K ITPMGGFPHYG + +D+L++KGC +GPKKRVVTLR++LL Q
Sbjct: 240 GNKVIKNNAATGFDLTDKSITPMGGFPHYGELKQDFLMLKGCIMGPKKRVVTLRKTLLAQ 299
Query: 350 TSRLALEEIKLKFIDTSSKF 369
TSR+A E+I LKFIDTSSKF
Sbjct: 300 TSRVAREKITLKFIDTSSKF 319
>gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia]
Length = 341
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/332 (60%), Positives = 261/332 (78%), Gaps = 5/332 (1%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTHI+R VE+PGSKL+ KE EAVTI+ETPPL VVG+VGY++TPRGLR+L TVW+ + +
Sbjct: 1 MTHILRTVERPGSKLNGKEVVEAVTIVETPPLAVVGIVGYIETPRGLRALTTVWSTKIAK 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
+ RRFYKNW SKKKAFT Y K + K+++ QL+++ KYC V+RV+ HTQ+ K+
Sbjct: 61 DTLRRFYKNWINSKKKAFTNYNK---ANAEPKNLETQLKRIVKYCQVVRVIVHTQMSKL- 116
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L+QKK H+ E+QVNGG+ QKV++A G EK++ +D VF+++E ID++GVTKGKG GV
Sbjct: 117 NLRQKKNHVFEVQVNGGTTEQKVNYAKGLLEKEVKVDQVFKQNEQIDVLGVTKGKGVAGV 176
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
+ R+GV L +KTHRG R+V CIG WHPA V ++VAR GQ GYHHRTEMNKKIY++G A+
Sbjct: 177 IKRFGVKHLQKKTHRGWRRVGCIGGWHPANVRYSVARTGQLGYHHRTEMNKKIYRIG-AA 235
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
+ ++A TE D T K ITP+GGFPHYG + D+L++KG VGPKKRVV LR+SL+ QTSR
Sbjct: 236 GDKNTASTEADLTSKAITPLGGFPHYGEIRNDFLMLKGGIVGPKKRVVLLRKSLVPQTSR 295
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYY 384
ALEEI LKF+DTSSK GHGRFQT +EKAK+Y
Sbjct: 296 KALEEITLKFVDTSSKIGHGRFQTQEEKAKFY 327
>gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus]
Length = 219
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/219 (89%), Positives = 212/219 (96%)
Query: 171 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 230
MKGLKQKKAHLMEIQVNGGS+AQK D+AYGFFEKQ+P++AVFQKDEMID+IGVTKGKGYE
Sbjct: 1 MKGLKQKKAHLMEIQVNGGSIAQKXDYAYGFFEKQVPVEAVFQKDEMIDLIGVTKGKGYE 60
Query: 231 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK+YK+GK
Sbjct: 61 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKIGK 120
Query: 291 ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQT 350
QESH+A+TEFDRTEKDITPMGGFPHYG+V DYL+IKG CVGPKKRV+TLRQSLLKQT
Sbjct: 121 TGQESHTAITEFDRTEKDITPMGGFPHYGIVKSDYLMIKGGCVGPKKRVITLRQSLLKQT 180
Query: 351 SRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
SR+ALEEIKLKFIDTSSKFGHGRFQTTQEK K++GRLKA
Sbjct: 181 SRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 219
>gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens]
Length = 276
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/277 (69%), Positives = 237/277 (85%), Gaps = 1/277 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGK K+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKAKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGKK ++ MKKYC VIR++AHTQ+R + L QKK+H
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDDGKKQLEKDFASMKKYCQVIRIIAHTQMRLLP-LAQKKSH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LME+Q+NGG+++ KVD+A E+ +PI+ VF +DEMID+IG+TKG Y+GV +RW +
Sbjct: 180 LMEVQLNGGNISDKVDWAREKLEQAVPINTVFTQDEMIDVIGITKGHRYKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHH 277
LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHH
Sbjct: 240 LPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH 276
>gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia]
gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia]
Length = 611
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/289 (68%), Positives = 239/289 (82%), Gaps = 1/289 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIK-QRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+MEIQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +
Sbjct: 180 VMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKK 239
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
LPRKTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 240 LPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288
>gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 381
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/366 (56%), Positives = 264/366 (72%), Gaps = 3/366 (0%)
Query: 23 SRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETP 82
S + V AFPKD+ ++ LT FLG+KAGMTH++R+V++ +KL K E VTIIETP
Sbjct: 2 SHRKATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREVKRTNTKLPKDGVLEPVTIIETP 61
Query: 83 PLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDG 142
P+VV G VGY KT GL+ + V+A+H+ +E +RR+ K W K+ K F +T+KY
Sbjct: 62 PMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYNDVKA 121
Query: 143 KKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFF 202
K + Q+ +K C V+RV+AHTQ+ + LKQKKA +MEIQ+NGGS+A+KVDFA
Sbjct: 122 KSKRERQIRLIKNRCDVVRVIAHTQM-ALVPLKQKKAEVMEIQINGGSIAEKVDFAVSLL 180
Query: 203 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262
EKQI +++VF DE ID+ VTKG GY GV+ R+GV LPRKTHRGLRKVAC+GAWHPAR
Sbjct: 181 EKQISVNSVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLPRKTHRGLRKVACVGAWHPAR 240
Query: 263 VSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVN 322
VS+TVARAGQ G+ RTE+NKKIY+LG + +A TEFD TEK ITPMGGFPHYGVV
Sbjct: 241 VSWTVARAGQMGFFKRTEVNKKIYRLG--CGDLKNAKTEFDITEKGITPMGGFPHYGVVK 298
Query: 323 EDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAK 382
D+L+IKG G ++RV++LR++ T+R A E+I LKFIDTSSK+GH RFQTT EK
Sbjct: 299 NDFLMIKGTVAGIRRRVISLRKACFPSTTRTAQEQIVLKFIDTSSKYGHSRFQTTTEKKA 358
Query: 383 YYGRLK 388
G +K
Sbjct: 359 RMGPMK 364
>gi|344248331|gb|EGW04435.1| 60S ribosomal protein L3-like [Cricetulus griseus]
Length = 363
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/337 (61%), Positives = 263/337 (78%), Gaps = 7/337 (2%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTH +R+V +PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++
Sbjct: 1 MTHTLREVHRPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSD 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
E RRRFY++W KSKKKAFTK K++ GKK +Q MKKYC VIRV+ HTQ+ K+
Sbjct: 61 ECRRRFYRDWHKSKKKAFTKACKRWRDPSGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLL 119
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
+QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV
Sbjct: 120 PFRQKKAHIMEIQLNGGTVAEKVAWAQAQLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGV 179
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
+RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 180 TSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGL 239
Query: 293 QES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SL
Sbjct: 240 HMEDGKMVKNNASTSYDMTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSL 299
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
L SR ALE I+LKFIDT+SKFGHGRFQT QEK +
Sbjct: 300 LVHHSRRALENIELKFIDTTSKFGHGRFQTAQEKRAF 336
>gi|378756821|gb|EHY66845.1| ribosomal protein L3 [Nematocida sp. 1 ERTm2]
Length = 394
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/389 (53%), Positives = 282/389 (72%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++ LT + YKAGMTH++R
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDATQKVHLTTYFAYKAGMTHVLRVG 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+ GSKL+KKE + VTI+ETP VV GVVGY KTPRGL ++ TV A+H++E V+RR+YK
Sbjct: 61 EREGSKLNKKEIIDPVTILETPKCVVFGVVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ +SKK A + Y KY+ +++IQA ++ VIRVL H+Q K+K L KKAH
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQA----IRDNADVIRVLIHSQAPKIKILNTKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME Q+NGG++ +K+DFA FEK+I F ++EMIDIIGVTKGKG+E RWG T
Sbjct: 177 IMESQLNGGTIQEKIDFALAHFEKEISSQDCFSREEMIDIIGVTKGKGFESCTKRWGTTI 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR NK++Y +G Q + + T
Sbjct: 237 LPRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLMGDG-QSTDACKT 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D TEK I PMGGF YG VN +++++KG VGP+KRV+ LR+ + ++ E I +
Sbjct: 296 EYDLTEKTINPMGGFTGYGHVNNEFIMVKGSVVGPRKRVLVLRKIVGRKYKSGNAESINI 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KFIDTSSK G GRFQT+ EK ++YG+LK+
Sbjct: 356 KFIDTSSKIGSGRFQTSAEKKQFYGKLKS 384
>gi|387594270|gb|EIJ89294.1| 60s ribosomal protein l3 [Nematocida parisii ERTm3]
gi|387595016|gb|EIJ92643.1| 60s ribosomal protein l3 [Nematocida parisii ERTm1]
Length = 393
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/389 (53%), Positives = 281/389 (72%), Gaps = 5/389 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRK+E PRHGSL FLPRKRA R R ++ ++P+DD ++ LT + YKAGMTH++R
Sbjct: 1 MSHRKYEAPRHGSLAFLPRKRAERIRPRIPSYPQDDETQKVHLTTYFAYKAGMTHVLRVG 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
E+ GSKL+K+E + VTI+ETP VV G+VGY KTPRGL ++ TV A+H++E V+RR+YK
Sbjct: 61 EREGSKLNKREIIDPVTILETPKCVVFGLVGYKKTPRGLVNVKTVLAEHIDESVKRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ +SKK A + Y KY+ +++IQA ++ VIRVL H+Q K+K L KKAH
Sbjct: 121 RYYRSKKTALSNYPLKYKNGVIEQEIQA----IRDNADVIRVLIHSQAPKIKALNTKKAH 176
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME Q+NGGS+ K+DFA FEK+I F K+EMIDIIGVTKGKG++ RWG T
Sbjct: 177 IMESQLNGGSIQDKIDFALSNFEKEISAPDCFSKEEMIDIIGVTKGKGFQSCTKRWGTTI 236
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
LPRKT++GLRKVACIGAWHP+RV ++V RAGQ G+HHR NK++Y +G Q + S T
Sbjct: 237 LPRKTNKGLRKVACIGAWHPSRVMYSVPRAGQTGFHHRVMQNKRVYLVGDG-QSTDSCKT 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E+D TEK I PMGGF YG VN +++++KG VGP+KRV+ LR+ + ++ E I +
Sbjct: 296 EYDLTEKTINPMGGFAGYGYVNNEFIMVKGSVVGPRKRVLVLRKIVGRKFKSGNAETINI 355
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KF+DTSSK G GRFQT+ EK ++YG+LK+
Sbjct: 356 KFVDTSSKIGSGRFQTSAEKKQFYGKLKS 384
>gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 399
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 260/326 (79%), Gaps = 7/326 (2%)
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
++ K+E EAVTIIETPPLVVVGVVGY++TPRGLRS T++A+H+++E RRRFYKNW KS
Sbjct: 58 EVSKREEVEAVTIIETPPLVVVGVVGYIETPRGLRSFRTIFAEHISDECRRRFYKNWHKS 117
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTK+ KK++ + GKK ++ MKKYC VIRV+ HTQ+ K+ ++QKKAH+MEIQ
Sbjct: 118 KKKAFTKFCKKWQDETGKKQLEKDFAAMKKYCKVIRVIVHTQM-KLLPMRQKKAHVMEIQ 176
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
+NGG+VA+KVD+A+ EKQI + +VF + EMID+IGVTKG G +GV +RW +LPRKT
Sbjct: 177 LNGGTVAEKVDWAHEKMEKQISVQSVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLPRKT 236
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM------ 299
H+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY++G+ M
Sbjct: 237 HKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTELNKKIYRIGRGVHVEDGKMVRNNGS 296
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T +D TEK ITPMGGFPHYG VN D++++KGC VG KKRV+TLR+SLL TSR ALE I+
Sbjct: 297 TNYDTTEKTITPMGGFPHYGEVNNDFVMVKGCVVGTKKRVLTLRKSLLVHTSRKALEPIE 356
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYG 385
LKFIDT+SKFG+G FQT QEK + G
Sbjct: 357 LKFIDTTSKFGYGHFQTAQEKRAFMG 382
>gi|429962137|gb|ELA41681.1| hypothetical protein VICG_01314 [Vittaforma corneae ATCC 50505]
Length = 383
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/387 (54%), Positives = 275/387 (71%), Gaps = 16/387 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS RKF PRHGSL F P++RAS R +KAFP+DD ++PC LTAFL YKAGMTH++R
Sbjct: 1 MSCRKFRAPRHGSLQFRPKRRASSIRPSIKAFPRDDSTQPCHLTAFLSYKAGMTHVIRSK 60
Query: 61 E-KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEV-RRRF 118
E K +K KE EAVTI+ETPP+V+ GVVGY +T GL+ V A+H++E V RR F
Sbjct: 61 EVKSKTKSQTKELLEAVTILETPPMVIHGVVGYQRTIGGLKRTKVVLAEHMSEGVIRRMF 120
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
K + K + T + DD +E++KK VIRVLAH+Q+ K++ + QKK
Sbjct: 121 TKRFVPGMKYTDLRKTVGFSQDD--------IEELKKTSDVIRVLAHSQVYKIRPIHQKK 172
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQVNGGS+++KVDFA E++IPI VF ++E+ID IGVTKGKG++GV+ RWGV
Sbjct: 173 AHIAEIQVNGGSISEKVDFAIERLEREIPISEVFSENELIDTIGVTKGKGFQGVIKRWGV 232
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
LPRKT++G+RKVACIGAWHP+RV ++VARAGQ G+H RT+MN +Y +G +
Sbjct: 233 RILPRKTNKGIRKVACIGAWHPSRVMYSVARAGQLGFHRRTQMNLAVYAIGNGND---PV 289
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
+T+FD T K I P+GGF +YG V DY+++KG GP+KRVVTLR+SLL + + E+I
Sbjct: 290 VTDFDLTVKTINPLGGFVNYGSVKNDYIMVKGPVTGPRKRVVTLRKSLLPKKT---TEDI 346
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+KFIDTSSK G GRFQT +EK +YG
Sbjct: 347 VIKFIDTSSKNGRGRFQTAEEKRAFYG 373
>gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15]
Length = 379
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/387 (52%), Positives = 272/387 (70%), Gaps = 9/387 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF R G+LG+LPRKR +R RG+ KAFP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKAFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ GS LH ++ + TII+ PP++ ++GY KTP+GLR++ TVWA H+ E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ ++K AF+ Y KK DG I+ QL ++K++ VIR++AHTQ + LKQKKA
Sbjct: 121 NYFHAEKTAFSTYMKK--AADGTY-IKEQLGRLKQHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 181 LMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+MEIQVNGG+ VA+KVD+AY EK I I VF ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVT 236
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
RLPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+++ + A +
Sbjct: 237 RLPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPKCCT 295
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD T+K I P+GGF +YG V D+++IKG C GPK+R V +R +LL + ++
Sbjct: 296 TEFDLTDKSINPVGGFVNYGRVQGDFIMIKGTCPGPKRRPVVMRSALLPHRN---CPPVQ 352
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGR 386
L++I T+SKFGHG F+T +E+ ++Y +
Sbjct: 353 LQWISTASKFGHGIFETVEERRQFYAK 379
>gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581]
Length = 379
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/387 (52%), Positives = 272/387 (70%), Gaps = 9/387 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF R G+LG+LPRKR +R RG+ K FP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGTPIHLTAFLGYKAGCTHVMRFI 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ GS LH ++ + TII+ PP++ ++GY KTP+GLR++ TVWA H+ E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ + K AF+ Y KK DG I+ QL ++K++ VIR++AHTQ + LKQKKA
Sbjct: 121 NYFHANKTAFSTYMKK--AADGTY-IKEQLGRLKEHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 181 LMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+MEIQVNGG SVA+KVD+AY EK I I VF+ + ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGKSVAEKVDYAYALMEKPISIKDVFEVGKQIDTISITRGRGFEGVVTRWGVT 236
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
RLPRKT RG RKVACIG+WHPA V +TVARAGQ GY HRT+ NK+++ + A +
Sbjct: 237 RLPRKTRRGNRKVACIGSWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPRCCT 295
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD T+K I P+GGF +YG + D+++IKG C GPK+R V +R SLL + ++
Sbjct: 296 TEFDLTDKSINPVGGFVNYGRIQGDFIMIKGTCPGPKRRPVVMRSSLLPHRN---YPPVQ 352
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGR 386
L++I T+SKFGHG F+T +E+ ++Y +
Sbjct: 353 LQWISTASKFGHGIFETVEERRQFYAK 379
>gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein, partial [Lolium perenne]
Length = 220
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 192/220 (87%), Positives = 206/220 (93%)
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
KM GLKQKKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGY
Sbjct: 1 KMNGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGY 60
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
EGVVTRWGVTRLPRKTHRGL KVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+G
Sbjct: 61 EGVVTRWGVTRLPRKTHRGLPKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 120
Query: 290 KASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
K QE+H A TEFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQ
Sbjct: 121 KVGQETHDASTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQ 180
Query: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
TSRLALEEIKLKF+D SSKFGHGRFQTT EK K+YG+LKA
Sbjct: 181 TSRLALEEIKLKFVDPSSKFGHGRFQTTDEKQKFYGKLKA 220
>gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
Length = 379
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/387 (52%), Positives = 271/387 (70%), Gaps = 9/387 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF R G+LG+LPRKR +R RG+ K FP D P LTAFLGYKAG TH++R +
Sbjct: 1 MSHRKFSCCRKGNLGYLPRKRCTRGRGRCKTFPPDVQGAPIHLTAFLGYKAGCTHVMRFI 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ GS LH ++ + TII+ PP++ ++GY KTP+GLR++ TVWA H+ E RRFY+
Sbjct: 61 DHRGSNLHNRQAIDQATIIDAPPMICTAIIGYAKTPKGLRAVTTVWAAHIAEPAMRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ ++K AF+ Y KK DG I+ QL ++K++ VIR++AHTQ + LKQKKA
Sbjct: 121 NYFHAEKTAFSTYMKK--AADGTY-IKEQLGRLKQHADVIRIVAHTQ-PALTPLKQKKAD 176
Query: 181 LMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+MEIQVNGG+ VA+KVD+AY EK I I VF ID I +T+G+G+EGVVTRWGVT
Sbjct: 177 IMEIQVNGGANVAEKVDYAYALMEKPISIKDVFSVGAQIDTISITRGRGFEGVVTRWGVT 236
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
RLPRKT RG RKVACIGAWHPA V +TVARAGQ GY HRT+ NK+++ + A +
Sbjct: 237 RLPRKTRRGNRKVACIGAWHPANVQYTVARAGQMGYFHRTDTNKQVFMIDTA-ENPRCCT 295
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD T+K I P+GGF +YG V D+++IKG C GPK+R V +R +LL + ++
Sbjct: 296 TEFDLTDKSINPVGGFVNYGRVQGDFIMIKGTCPGPKRRPVVMRNALLPHRN---CPPVQ 352
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGR 386
L++I T+SKFGHG F+T +E+ ++Y +
Sbjct: 353 LQWISTASKFGHGIFETVEERRQFYAK 379
>gi|149620465|ref|XP_001511933.1| PREDICTED: 60S ribosomal protein L3-like [Ornithorhynchus anatinus]
Length = 342
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/319 (63%), Positives = 253/319 (79%), Gaps = 7/319 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG LGFLP KR+ RHRG+VK++PKDDP KP LTAFLGYKAGMTH +R+V
Sbjct: 8 MSHRKFSAPRHGHLGFLPHKRSRRHRGRVKSWPKDDPKKPVHLTAFLGYKAGMTHTLREV 67
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PG K+ K+E EAVTI+ETPP+VVVGVVGYV TPRGLR+ T++A+HL++E RRRFYK
Sbjct: 68 HRPGLKVSKREEVEAVTIVETPPMVVVGVVGYVDTPRGLRNFKTIFAEHLSDECRRRFYK 127
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DGKK ++ MKKYC +IRV+ HTQ+ K+ +QKKA
Sbjct: 128 NWHKSKKKAFTKYCKKWQDADGKKRLEKDFASMKKYCKIIRVIVHTQM-KLLAFRQKKAD 186
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+Q+NGGSV+ KVD+A G EK +P+ AVF ++EM+D+I VTKG+G +GV +RW +
Sbjct: 187 VMEVQLNGGSVSDKVDWARGHLEKAVPVQAVFSQNEMVDVIAVTKGRGMKGVTSRWHAKK 246
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----- 295
LPRKTH+GLRKVACIGAWHPARV +++ARAGQ GYHHRTE+NKKIY+LG+
Sbjct: 247 LPRKTHKGLRKVACIGAWHPARVGYSIARAGQKGYHHRTEINKKIYRLGRGIHVEDGQVV 306
Query: 296 -HSAMTEFDRTEKDITPMG 313
++A T +D T K ITP+G
Sbjct: 307 RNNASTNYDITNKSITPLG 325
>gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 341
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 247/332 (74%), Gaps = 23/332 (6%)
Query: 79 IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK+WCKSKKKAFTK ++K+
Sbjct: 1 MECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFTKASRKWA 60
Query: 139 TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 198
+ G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH+MEIQVNGG+++QKVD+
Sbjct: 61 DEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAHIMEIQVNGGTISQKVDWI 119
Query: 199 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 258
FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAW
Sbjct: 120 RQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAW 179
Query: 259 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES----------------------H 296
HPARV+ +V RAGQ GY HRTE+NKKIY++G Q
Sbjct: 180 HPARVARSVTRAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVLPKPKG 239
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KRV+TLR++L+ Q + E
Sbjct: 240 NASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKRVITLRKTLIPQIKPRSKE 299
Query: 357 EIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 300 KIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 331
>gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae]
Length = 381
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/388 (52%), Positives = 270/388 (69%), Gaps = 17/388 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS RKFE PRHGSL F P+KRA + +K+F KDDP P LT F YKAGMTHIVR+
Sbjct: 1 MSCRKFEAPRHGSLAFCPKKRAKSVKQSIKSFEKDDPQSPIHLTGFYVYKAGMTHIVRNK 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
K KE EAVT++E PP+VV G+ GYV T GL+ T+ + H+N+ V RRF K
Sbjct: 61 IMKDKKSTVKEILEAVTVLEAPPMVVFGIQGYVNTSEGLKLKTTLISSHVNQSVIRRFLK 120
Query: 121 NWCKSKKK---AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
N+ S +K + TK K ETD+ ++ +K+ C IRV+ HTQI ++K +K K
Sbjct: 121 NFYTSSRKDMGSITKAITKEETDE-------KIAILKE-CDSIRVMMHTQIDRIKQIKTK 172
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQVNGGSVA KV++A EK++ + VF ++++ID+IGVTKGKG+ GV R+G
Sbjct: 173 KAHISEIQVNGGSVADKVEWAVSMLEKEVKVTDVFGENDLIDVIGVTKGKGFNGVTKRFG 232
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
LPRKT++G RKVACIGAWHPA V ++V RAGQ G+H RTE NK +YKLG Q S
Sbjct: 233 TKILPRKTNKGKRKVACIGAWHPANVLYSVPRAGQLGFHRRTEYNKMVYKLGNGKQ---S 289
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TE+D TEK + PMGGFPHYG V+ D+++IKG C GP+KRV+ LR++L ++++ E
Sbjct: 290 IKTEYDLTEKTVNPMGGFPHYGCVSNDFIMIKGSCPGPRKRVLALRKNL---RNKVSTEN 346
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
I+LKFIDTSSK G+GRFQT++EK ++G
Sbjct: 347 IQLKFIDTSSKIGNGRFQTSEEKRAFFG 374
>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 384
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/387 (53%), Positives = 274/387 (70%), Gaps = 16/387 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ + ++AFPKD + LTAF+GYKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVVRSK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR-F 118
+ + +K KE +AVT+IETPP+V+ GV GY T +GL + TV A H++E VRRR F
Sbjct: 61 IIQTKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREF 120
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
K W + + K+Y + +KD LE+++K +VIR+LAHTQ K+ L KK
Sbjct: 121 GKRW-----EQLSANIKEYNKEKAEKD----LEEIRKRASVIRILAHTQPTKIPALHLKK 171
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
+H+ EIQVNGG++ +KVD+A FEK++ ID VF+ +E +D IGVTKGKG++GVV R+GV
Sbjct: 172 SHISEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIGVTKGKGFQGVVKRFGV 231
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
T PRK+ +G+RKVACIGAWHP+RV TVARAGQ G+H RTE NKK+Y +G ++
Sbjct: 232 TIQPRKSRKGIRKVACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNE---LI 288
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TEFD TEK ITP+GG PHYG + DY+++KG +GP+KRVVTLR+SL K ++ A EE+
Sbjct: 289 KTEFDLTEKPITPLGGIPHYGSIKNDYIMVKGAVIGPRKRVVTLRKSLYK--TKKASEEL 346
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+KF+DTSSK G GRFQT +EK +YG
Sbjct: 347 IIKFVDTSSKIGKGRFQTAEEKRAFYG 373
>gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis]
Length = 332
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/333 (63%), Positives = 256/333 (76%), Gaps = 7/333 (2%)
Query: 50 KAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH 109
KAGMTHIVRD+++ GS HKKE EAVT++ETPP+VVVGVVGY TPRGLR L TVWA H
Sbjct: 1 KAGMTHIVRDLDRTGSLAHKKEVVEAVTVVETPPIVVVGVVGYTSTPRGLRQLTTVWATH 60
Query: 110 LNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIR 169
+ E RR YK++ SKK AF KY K T +G++ L +M KYC+VIRV+ HTQ++
Sbjct: 61 MAEGFIRRCYKHFAASKKAAFRKYFSKRNTPEGQQQFDDDLARMVKYCSVIRVIVHTQMK 120
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
K+ L QKKAH+MEIQ+NGGS+ +KVDFA EK++PI VF ++E IDIIGVTKG G+
Sbjct: 121 KLN-LGQKKAHVMEIQINGGSIQEKVDFAKSLLEKEVPIKDVFSQNEHIDIIGVTKGHGF 179
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
EGV RWG +LPRKTH+GLRKVACIGAWHPA V++ V RAGQ GYHHRTEMNKKIY++G
Sbjct: 180 EGVTHRWGTKKLPRKTHKGLRKVACIGAWHPANVTYAVPRAGQRGYHHRTEMNKKIYRIG 239
Query: 290 KASQE------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
E + +A+ E D TEK I PMGGFPHYG+V ED+L+IKGC VG KKRV+TLR
Sbjct: 240 AGYHEKDGKLVTANAVCEADPTEKSINPMGGFPHYGLVKEDFLIIKGCTVGTKKRVLTLR 299
Query: 344 QSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQT 376
+S+L TSR A EE+ LKFIDTSSKFGHGRFQT
Sbjct: 300 KSILPDTSRRAQEEVTLKFIDTSSKFGHGRFQT 332
>gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/213 (87%), Positives = 202/213 (94%)
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 236
KKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGYEGVVTRW
Sbjct: 1 KKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 60
Query: 237 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H
Sbjct: 61 GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
A TEFDRTEKDITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALE
Sbjct: 121 DASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALE 180
Query: 357 EIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
EIKLKF+DTSSKFGHGRFQTT EK ++YG+LKA
Sbjct: 181 EIKLKFVDTSSKFGHGRFQTTDEKQRFYGKLKA 213
>gi|284073158|gb|ADB77818.1| 60S ribosomal protein L3 [Entransia fimbriata]
Length = 236
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/236 (79%), Positives = 214/236 (90%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
KFEH RHGSLGFLPRKR+ R RGKVK+FP+DDP+KP LTAF+GYKAGMTHI+RDV+KPG
Sbjct: 1 KFEHARHGSLGFLPRKRSKRIRGKVKSFPRDDPTKPPGLTAFMGYKAGMTHIMRDVDKPG 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
SKLHKKE CEAVTIIE PP+VVVG+VGYVKTPRGLRSL TVWAQHL+EEV RRFYKN+ K
Sbjct: 61 SKLHKKEACEAVTIIEAPPIVVVGLVGYVKTPRGLRSLVTVWAQHLSEEVIRRFYKNYAK 120
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFTKY K+Y+ +GKKD+ QLE+MKKYC VIRVLAHTQ++K+KG++QKKAH+MEI
Sbjct: 121 SKKKAFTKYRKQYDNPEGKKDVDKQLERMKKYCQVIRVLAHTQVKKVKGIRQKKAHIMEI 180
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
QVNGGSVA+KVDF +FEK IPIDAVF KDEM+DIIGVT+G GYEGVVTRWGVTR
Sbjct: 181 QVNGGSVAEKVDFGVKYFEKAIPIDAVFNKDEMVDIIGVTRGHGYEGVVTRWGVTR 236
>gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus]
Length = 424
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/390 (52%), Positives = 259/390 (66%), Gaps = 34/390 (8%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 46 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVH 105
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG A T P + + L H+ EE +
Sbjct: 106 RPG--------LSAWTAGLASPFSEL-----LHLCHSLSGPGDSEGAHITEE------ET 146
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
KSKKKAFTK K++ DGKK +Q MK + +++L +QKKAH+
Sbjct: 147 GHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKNHVLQMKLLP---------FRQKKAHI 197
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +L
Sbjct: 198 MEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKL 257
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------ 295
PRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+
Sbjct: 258 PRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVK 317
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR AL
Sbjct: 318 NNASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAL 377
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
E I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 378 ENIELKFIDTTSKFGHGRFQTAQEKRAFMG 407
>gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus]
Length = 360
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/354 (56%), Positives = 261/354 (73%), Gaps = 18/354 (5%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KF P+HG LGFLP KR+S H KVK+FPKDD SKP LT FLGYKAGMTHIV++V
Sbjct: 1 MSHSKFSAPKHGFLGFLPHKRSSWHHRKVKSFPKDDASKPVYLTTFLGYKAGMTHIVQEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVG-------YVKTPRGLRSLCTVWAQHLNEE 113
++PGSK++KKE EAVTI++ PL YV++PRGLR+ TV+A+H+++E
Sbjct: 61 DRPGSKVNKKEVVEAVTIVD--PLTPPPPPVVVVGVVGYVESPRGLRTFNTVFAEHISDE 118
Query: 114 VRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG 173
+ RFYKNW KSKKKAFTKY KK++ GKK ++ MKKYC VI ++AHTQ+R +
Sbjct: 119 CKWRFYKNWHKSKKKAFTKYYKKWQDGTGKKQLEKDSSSMKKYCQVICIIAHTQMRLLP- 177
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L+QK AHLMEIQV+GG++A K+ +A E Q+P++ VF +DEMI +I VTKGKGY+GV
Sbjct: 178 LRQK-AHLMEIQVSGGTMADKLGWAQERLELQVPVNQVFGQDEMIIVIDVTKGKGYKGVT 236
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK--- 290
+RW +LPRKTH+GLRKVACIGAWHPARV+F+VA+AGQ GYHHR E N KIYK+G+
Sbjct: 237 SRWHTKKLPRKTHQGLRKVACIGAWHPARVAFSVAQAGQKGYHHRKETN-KIYKIGQGYL 295
Query: 291 ---ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVT 341
++A T++D ++K I +GGF HYG V D++++KGC VG KKRV+
Sbjct: 296 IKDGKLIKNNASTDYDLSDKSINSLGGFVHYGEVTNDFIMLKGCVVGTKKRVLA 349
>gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis]
Length = 305
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 242/305 (79%), Gaps = 5/305 (1%)
Query: 84 LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
++ VG VGY++TP GLR+L TV+A +L+EE +RRFYKN+ +SK+KAFTKY + Y +
Sbjct: 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAEN--- 57
Query: 144 KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFE 203
+ ++A++ + K+YCTVIR L HTQ+ K GL +KKA +MEIQVNGG+V+ K+DF FE
Sbjct: 58 QRMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKADIMEIQVNGGTVSDKIDFCVRCFE 116
Query: 204 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 263
+ IP+ +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV
Sbjct: 117 QPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARV 176
Query: 264 SFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNE 323
F V RAGQ GY RTE NKKIY++G+ + +A T D TEK ITPMGGFP YGVVN+
Sbjct: 177 QFQVPRAGQKGYGQRTETNKKIYRIGRG-DDPRNASTSADLTEKTITPMGGFPRYGVVNQ 235
Query: 324 DYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
D+L++KGC VG KKR++TLR+SL+ +R ALE + LKFIDTSSKFGHGRFQT+ EKAKY
Sbjct: 236 DFLMLKGCTVGCKKRLLTLRKSLVPPVTRSALEVVNLKFIDTSSKFGHGRFQTSAEKAKY 295
Query: 384 YGRLK 388
YG K
Sbjct: 296 YGPCK 300
>gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II]
gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum]
gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum]
Length = 305
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/305 (60%), Positives = 242/305 (79%), Gaps = 5/305 (1%)
Query: 84 LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
++ VG VGY++TP GLR+L TV+A +L+EE +RRFYKN+ +SK+KAFTKY + Y +
Sbjct: 1 MICVGFVGYIETPNGLRALTTVFAGYLSEECKRRFYKNYYRSKRKAFTKYARNYAEN--- 57
Query: 144 KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFE 203
+ ++A++ + K+YCTVIR L HTQ+ K GL +KKA +MEIQVNGG+V+ K+DF FE
Sbjct: 58 QRMEAEIARCKQYCTVIRALCHTQVSKT-GLNKKKADIMEIQVNGGTVSDKIDFCVRCFE 116
Query: 204 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 263
+ IP+ +F ++EMIDIIG++KGKGY+GV++RWGVT+LPRKT RG+RKV+CIGAWHPARV
Sbjct: 117 QPIPVSTIFNENEMIDIIGISKGKGYKGVISRWGVTKLPRKTRRGVRKVSCIGAWHPARV 176
Query: 264 SFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNE 323
F V RAGQ GY RTE NKKIY++G+ + +A T D TEK ITPMGGFP YGVVN+
Sbjct: 177 QFQVPRAGQKGYGQRTETNKKIYRIGRG-DDPRNASTSADLTEKTITPMGGFPRYGVVNQ 235
Query: 324 DYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
D+L++KGC VG KKR++TLR+SL+ +R ALE + LKFIDTSSKFGHGRFQT+ EKAKY
Sbjct: 236 DFLMLKGCTVGCKKRLLTLRKSLVPPVTRSALEVVNLKFIDTSSKFGHGRFQTSAEKAKY 295
Query: 384 YGRLK 388
YG K
Sbjct: 296 YGPCK 300
>gi|401828521|ref|XP_003887974.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
gi|392998982|gb|AFM98993.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
Length = 383
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/392 (51%), Positives = 266/392 (67%), Gaps = 19/392 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +AVTI+E PP+VV G+VGY +T GLR L V A ++++ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120
Query: 120 KNWC--KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
N K K F +D ++++ ++KK +RVL TQ +K L K
Sbjct: 121 GNNYVEKGNSKGFC----------ASEDSESRISEIKKRAECVRVLVQTQPGLIKKLGLK 170
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQVNGGS+++KVD+A EK++ + VF ++E ID+IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFG 230
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
V + PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G S S
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGSS---S 287
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL Q EE
Sbjct: 288 IRTEFDLTEKFISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLSMQKPS---EE 344
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+ +KF+DTSSK GHGRFQT++EK +YG KA
Sbjct: 345 LVIKFVDTSSKIGHGRFQTSEEKRAFYGAKKA 376
>gi|19173079|ref|NP_597630.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
gi|51701710|sp|Q8SQI3.1|RL3_ENCCU RecName: Full=60S ribosomal protein L3
gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
Length = 383
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/392 (52%), Positives = 268/392 (68%), Gaps = 19/392 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +AVT++E PP+VV G+VGY KT GLR L V A ++++ V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 120 KNWCKSKKKA--FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
N SK+ A F K + ++++E +K+ +RVL TQ +KGL K
Sbjct: 121 GNRYASKESAGQFCKGSV----------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQVNGGS+++KV++A G EK+I I VF +E ID IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFG 230
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
V + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G S +
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---N 287
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD TEK I+PMGGFPHYG V D++++KG VG +KRVVTLR+SLL+Q A EE
Sbjct: 288 IKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLRQR---AGEE 344
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+ +KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 345 LVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
>gi|300709014|ref|XP_002996676.1| 60S ribosomal protein L3 [Nosema ceranae BRL01]
gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
Length = 384
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/387 (51%), Positives = 268/387 (69%), Gaps = 16/387 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R ++AFPKDD + P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLAFCPRKRSKTIRPPIRAFPKDDCNAPIHLTGFIGYKAGMTHVIRTR 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEV-RRRF 118
+ +K KE +AVTIIETP V+ GV GY +T +GL+ + TV++ H+++ V RRR+
Sbjct: 61 TVQTKNKQSVKEILDAVTIIETPANVIYGVTGYEQTGKGLKRIATVFSSHIDQGVLRRRY 120
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
W + K +D +D + ++ ++KK +IRVL H+Q K+ L KK
Sbjct: 121 GLKWEEISAKL---------SDCSIEDKEQKIAELKKRACIIRVLVHSQPTKIPVLNLKK 171
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
+H EIQVNGG+V QKVD+A FEK+I I +F +E +D+IGVTKGKG+ GVV R+GV
Sbjct: 172 SHTAEIQVNGGNVEQKVDWALENFEKEINIRDIFDINENLDVIGVTKGKGFTGVVKRFGV 231
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
T+ PRK+ +G+RKVACIGAWHP+RV TVARAG G+H RTE+NKK+Y +G ++
Sbjct: 232 TKQPRKSRKGIRKVACIGAWHPSRVMTTVARAGGKGFHRRTEINKKVYMIGHGKEK---I 288
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TEFD TEK ITPMGGFPHYG + D++++KG +GP KRVVTLR+SLLK + E++
Sbjct: 289 KTEFDLTEKLITPMGGFPHYGSIKNDFIMLKGAIIGPSKRVVTLRKSLLKNHKK--SEDL 346
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+KF+DTSSK G GRFQT++EK +YG
Sbjct: 347 VIKFVDTSSKIGSGRFQTSEEKRAFYG 373
>gi|449330139|gb|AGE96402.1| 60S ribosomal protein l3 [Encephalitozoon cuniculi]
Length = 383
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/392 (52%), Positives = 267/392 (68%), Gaps = 19/392 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+ YKAGMTH+VR
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPAAGAFPADDRSQPVHLTGFMAYKAGMTHVVRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +AVT++E PP+VV G+VGY KT GLR L V A ++++ V RR +
Sbjct: 61 TQVAKNKQLSREIMDAVTVLEAPPMVVYGIVGYEKTVTGLRRLPIVTAAYVSDGVLRRMF 120
Query: 120 KNWCKSKKKA--FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
N SK+ A F K + ++++E +K+ +RVL TQ +KGL K
Sbjct: 121 GNRYASKESAGQFCKGSV----------CESRVEMIKERAHCVRVLVQTQPTLIKGLGLK 170
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQVNGGS+++KV++A G EK+I I VF +E ID IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVEWALGRLEKEIAIGEVFGVNENIDTIGVTKGKGFQGTVKRFG 230
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
V + PRK+ +G+RKVACIGAWHP+RV +++ARAGQ G+H RTE NK++Y +G S +
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSIARAGQMGFHRRTEKNKRVYMIGNGSS---N 287
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD TEK I+PMGGFPHYG V D++++KG VG +KRVVTLR+SLL Q A EE
Sbjct: 288 IKTEFDLTEKPISPMGGFPHYGEVRNDFIMVKGAVVGARKRVVTLRKSLLLQR---AGEE 344
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+ +KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 345 LVIKFVDTSSKIGHGRFQTSAEKKAFYGARKA 376
>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/390 (51%), Positives = 268/390 (68%), Gaps = 15/390 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R V AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +AVT++E PP+VV G+VGY +T GL L V A ++N+ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTASYVNDGVLRRMF 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
N K+ A ++ + T+ +++E++KK +RVL TQ +K L KKA
Sbjct: 121 GNKYMEKEAA-AQFCRGEVTE-------SRVEEIKKRAECVRVLVQTQPEMVKTLGLKKA 172
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+ EIQ+NGGS+ +KV++A EK+I I VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G S +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTK---IK 289
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL +Q EE+
Sbjct: 290 TEFDLTEKAISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLTQQRPS---EELV 346
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 347 IKFVDTSSKIGHGRFQTSAEKKAFYGAKKA 376
>gi|396082145|gb|AFN83757.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
Length = 383
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/390 (50%), Positives = 270/390 (69%), Gaps = 15/390 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFSAPRHGSLQFCPRKRSKTIRPSAGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
++ +K +E +AVT++E PP+VV GVVGY +T GLR L V A ++++ V RR +
Sbjct: 61 IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
N K + +K++ + + ++++ ++KK +RVL TQ +K L KKA
Sbjct: 121 GN-----KHVERENSKRFCASE---ETESRISEIKKKAECVRVLVQTQPGLIKKLGLKKA 172
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+ EIQVNGGS+++KV++ EK+I I VF+++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G + S
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNS---SIR 289
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL +Q EE+
Sbjct: 290 TEFDLTEKFISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLDQQRPS---EELV 346
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 347 IKFVDTSSKIGHGRFQTSDEKRAFYGAKKA 376
>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/390 (51%), Positives = 267/390 (68%), Gaps = 15/390 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R V AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSKTIRPSVGAFPADDISQPVHLTGFMGYKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +AVT++E PP+VV G+VGY +T GL L V ++N+ V RR +
Sbjct: 61 TQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRLPIVTVSYVNDGVLRRMF 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
N K+ A ++ + T+ +++E++KK +RVL TQ +K L KKA
Sbjct: 121 GNKYMEKEAA-AQFCRGEVTE-------SRVEEIKKRAECVRVLVQTQPEMVKTLGLKKA 172
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+ EIQ+NGGS+ +KV++A EK+I I VF ++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G S +
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMIGNGSTK---IK 289
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL +Q EE+
Sbjct: 290 TEFDLTEKAISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLTQQRPS---EELV 346
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 347 IKFVDTSSKIGHGRFQTSAEKKAFYGAKKA 376
>gi|402471198|gb|EJW05055.1| hypothetical protein EDEG_00836 [Edhazardia aedis USNM 41457]
Length = 408
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/403 (51%), Positives = 270/403 (66%), Gaps = 26/403 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS RK+E PRHGSL + PRKRA+ + ++AFPKD + C LTA +GYK GM+HI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPRKRANSVKQSLRAFPKDKGGE-CHLTATIGYKTGMSHIIRTS 59
Query: 61 EK--PGSKLHKKETCE---AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVR 115
E+ P K K T E AVT IE PP+++ G+VGY KT GL+ ++A++L++ V
Sbjct: 60 ERQRPTQKKQKATTHEVFDAVTFIECPPVIIFGIVGYKKTITGLKVHSRLFAKNLSDGVL 119
Query: 116 RRFYK------------NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVL 163
R + + N S K Y +KY D + +I+ +++ +KK C IRVL
Sbjct: 120 RAYNRRHTLKVNSASNPNTTVSTKNPLDFYVRKY---DDENEIENEIKNLKK-CDSIRVL 175
Query: 164 AHTQIRKMKGLKQKKAHLMEIQVNGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIG 222
+Q K++ L KK+H+ME+QVNGG +V +KVD+A EK+IPI VFQ E+IDII
Sbjct: 176 IQSQTEKIRTLNTKKSHVMEVQVNGGKNVCEKVDWALENMEKEIPIKQVFQDQEIIDIIA 235
Query: 223 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMN 282
VTKGKG++G R+G LPRKT++GLRKVACIGAWHP+RV +TV RAGQ G+H RTE+N
Sbjct: 236 VTKGKGFQGCTKRFGTRILPRKTNKGLRKVACIGAWHPSRVMWTVPRAGQMGFHRRTEIN 295
Query: 283 KKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTL 342
K+IYK+G ++ A TEFD T K I P+GGF HYG + DYL+IKG GP+KRVVTL
Sbjct: 296 KRIYKIGNGTE---LAKTEFDLTPKTINPVGGFKHYGNIQNDYLMIKGSVGGPRKRVVTL 352
Query: 343 RQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
R+SL + S L E I +KFIDTSSK G GRFQT +EKA YYG
Sbjct: 353 RKSLFTKFSSLNTENISIKFIDTSSKMGSGRFQTNEEKAAYYG 395
>gi|396081112|gb|AFN82731.1| 60S ribosomal protein L3 [Encephalitozoon romaleae SJ-2008]
Length = 383
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/390 (50%), Positives = 270/390 (69%), Gaps = 15/390 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR+ R AFP DD S+P LT F+GYKAGMTH++R
Sbjct: 1 MSCRKFSAPRHGSLQFCPRKRSKTIRPSPGAFPADDSSQPVHLTGFMGYKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
++ +K +E +AVT++E PP+VV GVVGY +T GLR L V A ++++ V RR +
Sbjct: 61 IQAAKNKQLSREVMDAVTVLEAPPMVVYGVVGYERTVTGLRRLPIVLAPYVSDGVLRRMF 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
N K + +K++ + + ++++ ++KK +RVL TQ +K L KKA
Sbjct: 121 GN-----KHVERENSKRFCASE---ETESRISEIKKKAECVRVLVQTQPGLIKKLGLKKA 172
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H+ EIQVNGGS+++KV++ EK+I I VF+++E ID+IGVTKGKG++G V R+GV
Sbjct: 173 HIAEIQVNGGSISEKVEWCLDMLEKEIHIGEVFKENENIDVIGVTKGKGFQGTVKRFGVR 232
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G + S
Sbjct: 233 KQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGNS---SIR 289
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL +Q EE+
Sbjct: 290 TEFDLTEKFISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLDQQRPS---EELV 346
Query: 360 LKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+KF+DTSSK GHGRFQT+ EK +YG KA
Sbjct: 347 IKFVDTSSKIGHGRFQTSDEKRAFYGAKKA 376
>gi|401825791|ref|XP_003886990.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
gi|392998147|gb|AFM98009.1| 60S ribosomal protein L3 [Encephalitozoon hellem ATCC 50504]
Length = 383
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/392 (50%), Positives = 265/392 (67%), Gaps = 19/392 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD- 59
MS RKF PRHGSL F PRKR++ AFP DD S+P LT F+G KAGMTH++R
Sbjct: 1 MSCRKFNAPRHGSLQFCPRKRSNTITPSAGAFPADDSSQPVHLTGFMGDKAGMTHVIRTK 60
Query: 60 VEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY 119
+ +K +E +A+TI+E PP+VV G+VGY +T GLR L V A ++++ V RR +
Sbjct: 61 TQVAKNKQLSREVMDALTILEAPPMVVYGIVGYERTVTGLRRLPIVLASYVSDGVLRRMF 120
Query: 120 KNWC--KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
N K K F +D ++++ ++KK +RVL TQ +K L K
Sbjct: 121 GNNYVEKGNSKGFC----------ASEDSESRISEIKKRAECVRVLVQTQPGLIKKLALK 170
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+ EIQVNGGS+++KVD+A EK++ + VF ++E ID+IGVTKGKG++G V R+G
Sbjct: 171 KAHIAEIQVNGGSISEKVDWALNMLEKEVHVGDVFGENENIDVIGVTKGKGFQGTVKRFG 230
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
V + PRK+ +G+RKVACIGAWHP+RV ++VARAGQ G+H RTE NK++Y +G S S
Sbjct: 231 VRKQPRKSRKGIRKVACIGAWHPSRVMYSVARAGQMGFHRRTEKNKRVYMVGNGSS---S 287
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
TEFD TEK I+PMGGFPHYG V D++++KG VGP+KRVVTLR+SL Q EE
Sbjct: 288 IRTEFDLTEKFISPMGGFPHYGEVKNDFIMVKGAVVGPRKRVVTLRKSLSMQKPS---EE 344
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
+ +KF+DTSSK GHGRFQT++EK +YG KA
Sbjct: 345 LVIKFVDTSSKIGHGRFQTSEEKRAFYGAKKA 376
>gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 350
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/336 (56%), Positives = 244/336 (72%), Gaps = 3/336 (0%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTH++R+V++ +KL K E VTIIETPP+VV G VGY KT GL+ + V+A+H+ +
Sbjct: 1 MTHVIREVKRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIAD 60
Query: 113 EVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
E +RR+ K W K+ K F +T+KY K + Q+ +K C V+RV+AHTQ+ +
Sbjct: 61 EFKRRYTKKWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM-ALV 119
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
LKQKKA +MEIQ+NGGS+A+KVDFA EKQI +++VF DE ID+ VTKG GY GV
Sbjct: 120 PLKQKKAEVMEIQINGGSIAEKVDFAVSLLEKQISVNSVFGTDECIDVCSVTKGHGYNGV 179
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
+ R+GV LPRKTHRGLRKVAC+GAWHPARVS+TVARAGQ G+ RTE+NKKIY+LG
Sbjct: 180 IKRFGVRHLPRKTHRGLRKVACVGAWHPARVSWTVARAGQMGFFKRTEVNKKIYRLG--C 237
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
+ +A TEFD TEK ITPMGGFPHYGVV D+L+IKG G ++RV++LR++ T+R
Sbjct: 238 GDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMIKGTVAGIRRRVISLRKACFPSTTR 297
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
A E+I LKFIDTSSK+GH RFQTT EK G +K
Sbjct: 298 TAQEQIVLKFIDTSSKYGHSRFQTTTEKKARMGPMK 333
>gi|427188202|dbj|BAM69086.1| 60S ribosomal protein L3, partial [Peranema trichophorum]
Length = 333
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/307 (58%), Positives = 237/307 (77%), Gaps = 1/307 (0%)
Query: 80 ETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYET 139
ETPP++VVG+VGY++TPRG R+L T+WA+ L R YKN+ SKKKA+ Y K +
Sbjct: 1 ETPPMIVVGIVGYIRTPRGYRTLKTIWAEQLPVGFIRSLYKNYALSKKKAYKNYLAKKKQ 60
Query: 140 DDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAY 199
+ GK+ + + +KKYC++IRV+A TQ K+ L+QKK+H MEIQ+NGGS A+KVDFA
Sbjct: 61 EKGKQQTERDIASLKKYCSIIRVIAITQAHKIPVLRQKKSHNMEIQINGGSTAEKVDFAL 120
Query: 200 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 259
E+ +P++ VFQ+ EM+D+I TKG G+EGV+ RWGVTRLPRKTH+GLRKVACIGAWH
Sbjct: 121 KLLEQPLPVNTVFQESEMVDVIATTKGHGFEGVIHRWGVTRLPRKTHKGLRKVACIGAWH 180
Query: 260 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS-AMTEFDRTEKDITPMGGFPHY 318
PARV FTV RAGQNG+HHRTE++KKI+K+GK++++ + A + D T+K ITPMGGF +Y
Sbjct: 181 PARVGFTVPRAGQNGFHHRTEIHKKIFKIGKSAEDDKANAKCDADLTDKTITPMGGFVNY 240
Query: 319 GVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQ 378
G V DY+++KGC GP+KRV+TLR++L T+R E+I LKFIDTSSK GHGRFQT +
Sbjct: 241 GTVKHDYVMLKGCIAGPRKRVITLRKTLRPVTNRDGTEQITLKFIDTSSKIGHGRFQTVE 300
Query: 379 EKAKYYG 385
EK K+ G
Sbjct: 301 EKDKFMG 307
>gi|48257062|gb|AAH04323.2| RPL3 protein, partial [Homo sapiens]
Length = 292
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/283 (64%), Positives = 228/283 (80%), Gaps = 7/283 (2%)
Query: 112 EEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
+E +RRFYKNW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R +
Sbjct: 1 DECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLL 60
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+G
Sbjct: 61 P-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKG 119
Query: 232 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK- 290
V +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 120 VTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 179
Query: 291 -----ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQS 345
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+S
Sbjct: 180 YLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKS 239
Query: 346 LLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 240 LLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 282
>gi|340053197|emb|CCC47485.1| putative ribosomal protein L3, fragment [Trypanosoma vivax Y486]
Length = 646
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/326 (56%), Positives = 239/326 (73%), Gaps = 3/326 (0%)
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
K+++KE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYKNW +S
Sbjct: 286 KIYQKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYKNWKQS 345
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKKAHLME 183
+ AFTK + T +G+ K +IRV+AHTQ+RK++ + K+AH+ E
Sbjct: 346 AQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGVKRAHVSE 405
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
IQ+NGG+V QK++ A EK+I ID+VFQ+ E D+ VTKG G+ GVV RWGV LPR
Sbjct: 406 IQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGVACLPR 465
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAMTEF 302
KTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY++G+A S E + A T +
Sbjct: 466 KTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQIGRAVSMEPNQATTAY 525
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
D T K ITPMGGF YG V DY+++KG GP++RV+TLR+ + QTSR E+I LKF
Sbjct: 526 DLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRVITLRRPMAPQTSRKLTEKITLKF 585
Query: 363 IDTSSKFGHGRFQTTQEKAKYYGRLK 388
IDTSSK GHGRFQT +EK++++G LK
Sbjct: 586 IDTSSKIGHGRFQTKKEKSQWFGPLK 611
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 174/289 (60%), Positives = 220/289 (76%), Gaps = 2/289 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ ++FPKDDPS+ LT+F+ YKAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKAIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ K +IRV+AHTQ+RK++ + K+
Sbjct: 121 NWKQSAQLAFTKRKQFARTKEGRLAEGRMFRAFAKKADIIRVVAHTQLRKLRNNRVGVKR 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
AH+ EIQ+NGG+V QK++ A EK+I ID+VFQ+ E D+ VTKG G+ GVV RWGV
Sbjct: 181 AHVSEIQINGGTVQQKIELAKSLLEKEIRIDSVFQQSEACDVCAVTKGHGFTGVVKRWGV 240
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYK 287
LPRKTHRGLRKVACIGAWHPARV +TVARAGQ+GYHHRT +NKKIY+
Sbjct: 241 ACLPRKTHRGLRKVACIGAWHPARVMYTVARAGQHGYHHRTHLNKKIYQ 289
>gi|444724683|gb|ELW65282.1| 60S ribosomal protein L3 [Tupaia chinensis]
Length = 322
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/394 (51%), Positives = 253/394 (64%), Gaps = 88/394 (22%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLP+KR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIV++V
Sbjct: 1 MSHRKFSVPRHGSLGFLPQKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVQEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ T+ A+H+++E +RRFYK
Sbjct: 61 NRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTILAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N MKKYC VI V+ HTQ+R + L QKKAH
Sbjct: 121 NC------------------------------MKKYCQVIHVITHTQMRLLP-LCQKKAH 149
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQVNGG+VA+K+D+A E+Q+ ++ VF + EMID+IG
Sbjct: 150 LMEIQVNGGTVAEKLDWAREQLEQQVSVNQVFGQVEMIDVIG------------------ 191
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
GYHHRTE+N KIYK+G+
Sbjct: 192 --------------------------------KGYHHRTEIN-KIYKIGQGYLIKDGKLI 218
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A T++D ++K I +GGF HYG V D++++KGC VG KKRV+TLR+ LL QT R A
Sbjct: 219 KNNASTDYDLSDKSINALGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKFLLVQTKRRA 278
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 279 LEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 312
>gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus]
Length = 283
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/270 (66%), Positives = 220/270 (81%), Gaps = 7/270 (2%)
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFTK +KK+ D GKK I+ +K+ KYC V+RV+AHTQ++ +K +QKKAH+MEI
Sbjct: 1 SKKKAFTKSSKKWSDDLGKKSIERDFKKIVKYCKVVRVIAHTQMKLLK-QRQKKAHIMEI 59
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
Q+NGGS+A KV +A EK IPI+ VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 60 QLNGGSIADKVQWAREHLEKPIPINQVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 119
Query: 245 THRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA--SQES----HSA 298
TH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY++G S+++ ++A
Sbjct: 120 THKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGAGIHSKDNKVIKNNA 179
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SLL T R+ALE+I
Sbjct: 180 STEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGPKKRVITLRKSLLVHTKRVALEKI 239
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 240 NLKFIDTSSKFGHGRFQTAADKAAFMGPLK 269
>gi|395757075|ref|XP_002834695.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
Length = 264
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 171/265 (64%), Positives = 221/265 (83%), Gaps = 7/265 (2%)
Query: 54 THIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEE 113
THIVR+V++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E
Sbjct: 1 THIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDE 60
Query: 114 VRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG 173
+RRFYKNW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R +
Sbjct: 61 CKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP- 119
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV
Sbjct: 120 LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVT 179
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK--- 290
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 180 SRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYL 239
Query: 291 ---ASQESHSAMTEFDRTEKDITPM 312
++A T++D ++K I P+
Sbjct: 240 IKDGKLIKNNASTDYDLSDKSINPL 264
>gi|8572153|gb|AAF77028.1|AF247847_1 ribosomal protein L3 [Caenorhabditis briggsae]
Length = 246
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 162/247 (65%), Positives = 204/247 (82%), Gaps = 1/247 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG +GF P+KR+ +RG++KAFPKDD SKP LTAFLGYKAGMTHIVRDV
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAV+IIETPP+V+ GV GY+ TP+G R+L T+WA+HL+EE RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAH
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+EIQ+NGG++ QKVD+A EKQI +D VF +DEMID IGVTKG G++GV +RW +
Sbjct: 180 LVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVTKGHGFKGVTSRWHTKK 239
Query: 241 LPRKTHR 247
LPRKTH+
Sbjct: 240 LPRKTHK 246
>gi|71984550|ref|NP_001021256.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
gi|51011805|emb|CAH10798.1| Protein RPL-3, isoform d [Caenorhabditis elegans]
Length = 303
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/264 (61%), Positives = 216/264 (81%), Gaps = 4/264 (1%)
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
KAFTKY KK++ +DGKK I+A K+KKYC+ IRV+AHTQ++ ++ +QKKAHL+EIQVN
Sbjct: 30 KAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILR-RRQKKAHLVEIQVN 88
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
GG++ QKVD+A EKQ+ +D VF +DEMID IGVT+G G++GV +RW +LPRKTH+
Sbjct: 89 GGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHK 148
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS---QESHSAMTEFDR 304
GLRKVACIGAWHP+RV+FTVARAGQ G+HHRT +N KIY++GK++ + ++ TEFD
Sbjct: 149 GLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDL 208
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
T+K ITPMGGFP YG+VN+DY++++G +GPKKR++TLR+SL+ QT R+A E+I LK+ID
Sbjct: 209 TQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWID 268
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLK 388
TSSK GHGRFQTT EK + G+LK
Sbjct: 269 TSSKTGHGRFQTTAEKRAFMGKLK 292
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPK 34
MSHRKF PRHG +GF P+KR+ +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster]
Length = 316
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/271 (63%), Positives = 210/271 (77%), Gaps = 7/271 (2%)
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLME 183
KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH+ME
Sbjct: 24 KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAHVME 82
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
IQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +LPR
Sbjct: 83 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 142
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHS 297
KTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G ++
Sbjct: 143 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNN 202
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLLK T R ALE+
Sbjct: 203 ASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQ 262
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
IKLKFIDTSSK GHGRFQT +K + G LK
Sbjct: 263 IKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 293
>gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
Length = 331
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/336 (50%), Positives = 238/336 (70%), Gaps = 16/336 (4%)
Query: 53 MTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNE 112
MTH++++V+KPGSKLHKK+ EA T++ETPPLV+ G+VGYV TP+GL++ T+W+ +L+
Sbjct: 1 MTHVIKEVDKPGSKLHKKDVIEAATVVETPPLVIAGIVGYVSTPKGLKAFKTIWSDNLSH 60
Query: 113 EVRRRFYKNWCKSKKKAFTKY---TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIR 169
+ R +YKNW KSKKKAF+KY KK T K +Q MKK+C V R + H I
Sbjct: 61 QFLRNYYKNWYKSKKKAFSKYFIVKKKISTFFEKNVLQ-----MKKFCKVFRFIVHPNIC 115
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
+ +K+KKA + EIQVNGGS+ K+ F Q+ ++ VF+ E +D I +TKGKG+
Sbjct: 116 QT-SMKKKKAEICEIQVNGGSIHDKISFCLKLLGNQVTVNTVFKDGEYVDTIAITKGKGF 174
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
GVV RWGVT+LPRKT RG RKVACIG+WHP+RVS++V RAGQ GYHHRT+ N ++YK+G
Sbjct: 175 TGVVQRWGVTKLPRKTRRGARKVACIGSWHPSRVSYSVPRAGQKGYHHRTQSNIQVYKIG 234
Query: 290 KASQESHSAMTEFDRT---EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
K+S+ F++T +K+I+P+GGFP+YG++ D+++ KGC G K+R + +++
Sbjct: 235 KSSK----GFDFFEKTPLIQKNISPIGGFPYYGIIKTDFIMFKGCITGSKRRTIIIKKKN 290
Query: 347 LKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAK 382
+K I LKFIDTSSK+GHGRFQT++EK K
Sbjct: 291 IKNIDCQKTSNIILKFIDTSSKWGHGRFQTSEEKRK 326
>gi|379072556|gb|AFC92910.1| ribosomal protein L3, partial [Hymenochirus curtipes]
Length = 256
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/257 (64%), Positives = 209/257 (81%), Gaps = 7/257 (2%)
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTKY KK++ ++GKK ++ + MKKYC VIRV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKKWQDEEGKKQLEKDIASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 59
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
VNGG++A+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 60 VNGGTIAEKVDWAREKLEQQVAIAGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 119
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAM 299
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A
Sbjct: 120 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAS 179
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T++D ++K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL QTSR ALE+I
Sbjct: 180 TDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKID 239
Query: 360 LKFIDTSSKFGHGRFQT 376
LKFIDT+SKFGHGRFQT
Sbjct: 240 LKFIDTTSKFGHGRFQT 256
>gi|379072554|gb|AFC92909.1| ribosomal protein L3, partial [Rhinophrynus dorsalis]
Length = 256
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/257 (64%), Positives = 207/257 (80%), Gaps = 7/257 (2%)
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTKY KK++ D+GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 59
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
VNGG+VA+KVD+A E+Q+ + VF +DEMID+IGVTKGKG +GV +RW +LPRKT
Sbjct: 60 VNGGTVAEKVDWAREKLEQQVAVSGVFGQDEMIDVIGVTKGKGNKGVTSRWHTKKLPRKT 119
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAM 299
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A
Sbjct: 120 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAS 179
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T++D ++K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL QTSR ALE+I
Sbjct: 180 TDYDLSDKSINPLGGFVHYGEVKNDFIMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKID 239
Query: 360 LKFIDTSSKFGHGRFQT 376
LKFIDT+SKFGHGRFQT
Sbjct: 240 LKFIDTTSKFGHGRFQT 256
>gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 664
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/384 (47%), Positives = 246/384 (64%), Gaps = 45/384 (11%)
Query: 4 RKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD-VEK 62
RKF PRHGSL F PRKR+ + ++AFPKD + LTAF+GYKAGMTH++R + +
Sbjct: 176 RKFNAPRHGSLAFGPRKRSKTIKPSIRAFPKDVQEEKIHLTAFIGYKAGMTHVIRSKIIQ 235
Query: 63 PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRR-FYKN 121
+K KE +AVT+IETPP+V+ GV GY T +GL + TV A H++E VRRR F K
Sbjct: 236 TKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRIATVLAPHIDESVRRREFGKR 295
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W + + K+Y + +KD LE+++K +VIR+LAHTQ K+ L KK+H+
Sbjct: 296 W-----EQLSANIKEYNKEKAEKD----LEEIRKRASVIRILAHTQPTKIPALHLKKSHI 346
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EIQVNGG++ +KVD+A FEK++ ID VF+ +E +D IG
Sbjct: 347 SEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIG------------------- 387
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
VACIGAWHP+RV TVARAGQ G+H RTE NKK+Y +G ++ TE
Sbjct: 388 ----------VACIGAWHPSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNE---LIKTE 434
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
FD TEK ITP+GG PHYG + DY+++KG +GP+KRVVTLR+SL K ++ A EE+ +K
Sbjct: 435 FDLTEKPITPLGGIPHYGSIKNDYIMVKGAVIGPRKRVVTLRKSLYK--TKKASEELIIK 492
Query: 362 FIDTSSKFGHGRFQTTQEKAKYYG 385
F+DTSSK G GRFQT +EK +Y
Sbjct: 493 FVDTSSKIGKGRFQTAEEKRAFYA 516
>gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua]
Length = 280
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/261 (62%), Positives = 206/261 (78%), Gaps = 7/261 (2%)
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+KK++ + G+K I+ +KM +YC+VIR++AHTQ++ +K +QKKAH+MEIQ+NGG +
Sbjct: 1 SKKWQDELGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLK-QRQKKAHIMEIQINGGKIED 59
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KV++A E Q P+ VF +DEMID IGVTKGKGY+GV +RW +LPRKTH+GLRKVA
Sbjct: 60 KVNWAREHLENQFPLTRVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRKTHKGLRKVA 119
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEK 307
CIGAWHP+RVSFTVARAGQ GYHHRTEMNKKIY+LG+ ++A TE+D +EK
Sbjct: 120 CIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRLGQGIHTKDGKVIKNNASTEYDFSEK 179
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITPMGGFPHYG VN D+++IKGCC+GPKKRV+TLR+SL T R ALE+I LKFIDTSS
Sbjct: 180 SITPMGGFPHYGEVNNDFVMIKGCCMGPKKRVITLRKSLRVHTKRAALEKINLKFIDTSS 239
Query: 368 KFGHGRFQTTQEKAKYYGRLK 388
KFGHGRFQT +KA + G LK
Sbjct: 240 KFGHGRFQTPADKAAFMGVLK 260
>gi|284073162|gb|ADB77820.1| 60S ribosomal protein L3 [Mesostigma viride]
Length = 225
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/228 (71%), Positives = 193/228 (84%), Gaps = 3/228 (1%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
KFEH R GSLGFLP+KRA R RGKVK+FPKDD ++ LTAF+G+KAGMTHI+R+V+KPG
Sbjct: 1 KFEHARCGSLGFLPKKRAKRMRGKVKSFPKDDRTQKPHLTAFMGFKAGMTHILREVDKPG 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
SKLHKKETCEAVTIIE P +VVVGV GY KT GL+++ TVWA+HLN+EV+RRFYKNW K
Sbjct: 61 SKLHKKETCEAVTIIEVPAMVVVGVTGYAKTTGGLKTIGTVWAKHLNDEVKRRFYKNWYK 120
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
SKKKAFTKY KK E D K++Q LE++KKY +VIR+LAHTQ+RK+ LKQKKAHLMEI
Sbjct: 121 SKKKAFTKYAKKVEND---KELQESLERLKKYSSVIRILAHTQVRKVPNLKQKKAHLMEI 177
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
QVNGG V KVDFAY FEK + +DA+F ++EMIDIIGVTKGKGY+GV
Sbjct: 178 QVNGGEVPAKVDFAYDLFEKAVNVDAIFAQNEMIDIIGVTKGKGYQGV 225
>gi|284073164|gb|ADB77821.1| 60S ribosomal protein L3 [Ostreococcus tauri]
Length = 230
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/234 (72%), Positives = 201/234 (85%), Gaps = 4/234 (1%)
Query: 7 EHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
EH R+G+LGFLP+KR+ R RGKVK+FPKDD SKP LTAF+G+KAGMTH+VRDVEKPGSK
Sbjct: 1 EHARYGNLGFLPKKRSQRSRGKVKSFPKDDASKPPHLTAFMGFKAGMTHVVRDVEKPGSK 60
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
+HKKE C+AVTIIE P LVVVG+VGYV+TP+GLR TVWA+HLN+E+RRRFYKNW KSK
Sbjct: 61 MHKKEQCDAVTIIECPELVVVGLVGYVRTPKGLRGKKTVWAEHLNDEIRRRFYKNWFKSK 120
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
KKAFTKY K Y +KD LE++KK C VIRV+AHTQ+RK+KGLKQKKAH+MEIQV
Sbjct: 121 KKAFTKYAKNYTNGSIEKD----LEELKKSCDVIRVIAHTQVRKVKGLKQKKAHIMEIQV 176
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
NGG A KVDF + FEK +P+D+VFQ+DEMID+IGVTKGKG++GVVTRWGVTR
Sbjct: 177 NGGDAAAKVDFGFALFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTR 230
>gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 340 bits (871), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 170/293 (58%), Positives = 211/293 (72%), Gaps = 23/293 (7%)
Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
F K KKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QK
Sbjct: 27 FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQK 85
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW
Sbjct: 86 KAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWH 145
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES-- 295
+LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 146 TKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLE 205
Query: 296 --------------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGP 335
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP
Sbjct: 206 VAKAEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGP 265
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+KRV+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 266 RKRVITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 318
>gi|379072552|gb|AFC92908.1| ribosomal protein L3, partial [Pipa carvalhoi]
Length = 255
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 166/257 (64%), Positives = 207/257 (80%), Gaps = 8/257 (3%)
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTKY KK + ++GKK ++ MKKYC VIRV+AHTQ+R + L+QKK+HLMEIQ
Sbjct: 1 KKKAFTKYCKK-QDEEGKKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEIQ 58
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
VNGG+VA+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY+GV +RW +LPRKT
Sbjct: 59 VNGGTVAEKVDWAREKLEQQVLIGGVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKT 118
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAM 299
HRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A
Sbjct: 119 HRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNAS 178
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
T++D ++K I P+GGF HYG V D++++KGC +G KKRV+TLR+SLL QTSR ALE+I
Sbjct: 179 TDYDLSDKSINPLGGFVHYGEVKNDFVMLKGCVIGTKKRVLTLRKSLLVQTSRRALEKID 238
Query: 360 LKFIDTSSKFGHGRFQT 376
LKFIDT+SKFGHGRFQT
Sbjct: 239 LKFIDTTSKFGHGRFQT 255
>gi|429963937|gb|ELA45935.1| hypothetical protein VCUG_02577 [Vavraia culicis 'floridensis']
Length = 385
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 250/393 (63%), Gaps = 15/393 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS RK+E PRHGSL + P++RA + R A P+D P+ LT+FL YKAGMTHI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPKRRAKQIRQPSPAPPRDCPTDKPHLTSFLAYKAGMTHILRIT 60
Query: 61 EKPG----SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRR 116
+ ++ +KE +AV+I+E P + V G+ Y K RGL ++++E +
Sbjct: 61 TRKSNDKKAREIRKEVVDAVSILEAPEMRVYGIRLYAKGVRGLVLKEEYVTKNMSECLLA 120
Query: 117 RFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCT---VIRVLAHTQIRKMKG 173
R + + +S K + K ++ +I AQ EK Y T V++VL HT+I +K
Sbjct: 121 RMVRRYHRSGLKK--NFKTKENAEENVNEIGAQFEKY--YGTSGVVVKVLVHTKINMIK- 175
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L KKAH++E+QVNGG+V KV +A F K + I VF + E+I I GVTKGKG+ GVV
Sbjct: 176 LDSKKAHVLEVQVNGGTVEDKVQYALSIFNKDVKIGEVFDEQELISICGVTKGKGFTGVV 235
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 293
R+GV LPRK+++G+RKVACIGAWHPA V TVARAGQ G RT MNKK+ K+G A Q
Sbjct: 236 KRFGVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGSFKRTLMNKKVLKIGNAMQ 295
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
S TEFD T K I PMGGF +YG+V DYL++KG CVGP KRV+TL +S +
Sbjct: 296 ---SVQTEFDLTNKTINPMGGFINYGMVKNDYLMVKGPCVGPVKRVITLCKSYSETRKLR 352
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
+E I +KFIDTSSK GHGRFQT EKA YY +
Sbjct: 353 NVESIDIKFIDTSSKMGHGRFQTVGEKASYYSK 385
>gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/292 (57%), Positives = 210/292 (71%), Gaps = 23/292 (7%)
Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
F K KKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QK
Sbjct: 27 FIKIGANPKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQK 85
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
KAH+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW
Sbjct: 86 KAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWH 145
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES-- 295
+LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 146 TKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLE 205
Query: 296 --------------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGP 335
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP
Sbjct: 206 VAKAEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGP 265
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
+KRV+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G L
Sbjct: 266 RKRVITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPL 317
>gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 329
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/285 (58%), Positives = 209/285 (73%), Gaps = 23/285 (8%)
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
KKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH+MEIQ
Sbjct: 36 KKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAHIMEIQ 94
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
VNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +LPRKT
Sbjct: 95 VNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKT 154
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES---------- 295
H+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 155 HKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAK 214
Query: 296 ------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KRV+TLR
Sbjct: 215 DDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKRVITLR 274
Query: 344 QSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 275 KTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 319
>gi|188572498|gb|ACD65155.1| putative 60S ribosomal protein RPL3 [Phoronis muelleri]
Length = 223
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 156/224 (69%), Positives = 191/224 (85%), Gaps = 1/224 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSL FLP+KR+ RHRGK KAFPKDD SKP LTAFLGYKAGM+HIVRDV
Sbjct: 1 MSHRKFSAPRHGSLAFLPKKRSVRHRGKCKAFPKDDSSKPVHLTAFLGYKAGMSHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK +KKE EAVTI+ETPP++ VGVVGY++TP+GLR+ TVWA+HL+EE RRRFYK
Sbjct: 61 DRPGSKANKKEVVEAVTIVETPPMIAVGVVGYIETPKGLRTFKTVWAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ DDGK+ I+ L KMKKYC V+RV+AHTQ++ +K +QKKAH
Sbjct: 121 NWYKSKKKAFTKYGKKWKDDDGKQAIEKDLNKMKKYCKVVRVIAHTQMKLLKK-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 224
+MEIQ+NGG+VAQKVD+A E+++P+ +VF DEMID+IGVT
Sbjct: 180 IMEIQLNGGTVAQKVDWAREHLEQKLPVKSVFAXDEMIDVIGVT 223
>gi|388493378|gb|AFK34755.1| unknown [Lotus japonicus]
Length = 173
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 156/173 (90%), Positives = 167/173 (96%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH
Sbjct: 1 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 60
Query: 277 HRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPK 336
HRTE+NKKIY+LGKA ESHSA+TEFDRTEK+ITPMGGFPHYG+V +D+L+IKG CVGPK
Sbjct: 61 HRTELNKKIYRLGKAGDESHSAITEFDRTEKEITPMGGFPHYGIVKDDFLMIKGGCVGPK 120
Query: 337 KRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KRVVTLRQSLL QTSR+ALEEIKLKFIDTSSKFGHGRFQ+TQEK K+YGRLKA
Sbjct: 121 KRVVTLRQSLLTQTSRVALEEIKLKFIDTSSKFGHGRFQSTQEKQKFYGRLKA 173
>gi|324523353|gb|ADY48234.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 264
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 156/236 (66%), Positives = 196/236 (83%), Gaps = 2/236 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR+V
Sbjct: 4 MSHRKFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREV 63
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSK++KKE EAVTI+ETPP+V+VG+VGY+ TPRG R TVWA+HL+E+ RRRFYK
Sbjct: 64 DKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYK 123
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IRV+AHTQ++ MK ++KKAH
Sbjct: 124 NWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQMKVMK-HREKKAH 182
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 236
+MEIQVNGG+V +KVD+A EKQ+ +D+VF +DEMID IGVTKG Y G +W
Sbjct: 183 IMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGT-YHGDPGQW 237
>gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens]
gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
Length = 251
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 158/242 (65%), Positives = 197/242 (81%), Gaps = 7/242 (2%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
MKKYC VIRV+AHTQ+R + L+QKKAHLMEIQVNGG+VA+K+D+A E+Q+P++ VF
Sbjct: 1 MKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVF 59
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
+DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ
Sbjct: 60 GQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQ 119
Query: 273 NGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYL 326
GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+GGF HYG V D++
Sbjct: 120 KGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV 179
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 180 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGP 239
Query: 387 LK 388
LK
Sbjct: 240 LK 241
>gi|355709847|gb|EHH31311.1| 60S ribosomal protein L3-like protein, partial [Macaca mulatta]
Length = 284
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/268 (58%), Positives = 201/268 (75%), Gaps = 8/268 (2%)
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLME 183
KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ H K+ +QKKAH+ME
Sbjct: 2 KSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHQM--KLLPFRQKKAHIME 59
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
IQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +LPR
Sbjct: 60 IQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPR 119
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HS 297
KTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ ++
Sbjct: 120 KTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVKNN 179
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A T +D T K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR A+E
Sbjct: 180 ASTSYDVTAKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRQAVEN 239
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
I+LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 240 IELKFIDTTSKFGHGRFQTAEEKRAFMG 267
>gi|334362360|gb|AEG78379.1| 60S ribosomal protein L3 [Epinephelus coioides]
Length = 261
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/252 (61%), Positives = 197/252 (78%), Gaps = 7/252 (2%)
Query: 143 KKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFF 202
+K ++ MKKYC VIRV+AHTQ+R + L+QKK+HLME+Q+NGGS++ KVD+A
Sbjct: 1 EKQLEKDFASMKKYCQVIRVIAHTQMRLLP-LRQKKSHLMEVQLNGGSISDKVDWAREKL 59
Query: 203 EKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPAR 262
E+ +P+ VF +DEMID+IG+TKG GY+GV +RW +LPRKTHRGLRKVACIGAWHPAR
Sbjct: 60 EQAVPVSNVFNQDEMIDVIGITKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR 119
Query: 263 VSFTVARAGQNGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFP 316
V+F+VARAGQ GYHHRTE+NKKIYK+G+ ++A TE+D + K I P+GGF
Sbjct: 120 VAFSVARAGQKGYHHRTEINKKIYKIGQGYHTKDGKLVKNNASTEYDLSNKSINPLGGFV 179
Query: 317 HYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQT 376
HYG V D++++KGC VG KKRV+TLR+SLL QTSR ALE+I LKFIDT+SKFGHGRFQT
Sbjct: 180 HYGDVTNDFVMVKGCVVGTKKRVLTLRKSLLVQTSRRALEKIDLKFIDTTSKFGHGRFQT 239
Query: 377 TQEKAKYYGRLK 388
+EK + G LK
Sbjct: 240 VEEKKAFMGPLK 251
>gi|440493542|gb|ELQ75998.1| 60S ribosomal protein L3 [Trachipleistophora hominis]
Length = 384
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 250/394 (63%), Gaps = 18/394 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS RK+E PRHGSL + P+KRA + R A P D+P+ LT+FL YKAGMTHI+R
Sbjct: 1 MSCRKYEAPRHGSLAYCPKKRAKQIRQPAAAAPPDNPADKPHLTSFLAYKAGMTHILRIT 60
Query: 61 EKPG----SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRR 116
+ ++ +KE +AV+++E P + V G+ Y + RGL ++ +E +
Sbjct: 61 TRKSNDKKAREIRKEVVDAVSVLEAPAMRVYGIRVYTRGVRGLVLADEYVTKNKSECLLA 120
Query: 117 RFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC----TVIRVLAHTQIRKMK 172
R + + +S A K + + D++A+ EK YC +++VL HT+I +K
Sbjct: 121 RMVRRYHRS---ALKKNAGRENVQEDLNDVRARFEK---YCATSNVLVKVLMHTKIETLK 174
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L KKAH++E+QVNGGSVA KV +A I I VF + E+I I GVTKGKG+ GV
Sbjct: 175 -LDSKKAHVLEVQVNGGSVADKVQYALSVLNTDISIGEVFNEQELISICGVTKGKGFTGV 233
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
V R+GV LPRK+++G+RKVACIGAWHPA V TVARAGQ G RT +NKK+ K+G A+
Sbjct: 234 VKRFGVRILPRKSNKGIRKVACIGAWHPAGVLRTVARAGQMGCFKRTLINKKVLKIGNAT 293
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
Q S TEFD T+K I P+GGF +YG+V DYL++KG CVGP KRVVTL +S
Sbjct: 294 Q---SVQTEFDLTDKTINPLGGFVNYGMVKNDYLMVKGPCVGPVKRVVTLCKSYTGSRKL 350
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
E+I +KFIDTSSK GHGRFQT +EKA YY +
Sbjct: 351 RNTEDIDIKFIDTSSKMGHGRFQTVEEKAAYYSK 384
>gi|55391486|gb|AAH85243.1| Rpl3l protein, partial [Mus musculus]
Length = 281
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 200/265 (75%), Gaps = 7/265 (2%)
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
KKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+MEIQ+
Sbjct: 1 KKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQL 59
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
NGG+VA+KV + EKQ+P+ +VF + E+ID+I VTKG+G +GV +RW +LPRKTH
Sbjct: 60 NGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTH 119
Query: 247 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMT 300
+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ ++A T
Sbjct: 120 KGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNAST 179
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+L
Sbjct: 180 SYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRALENIEL 239
Query: 361 KFIDTSSKFGHGRFQTTQEKAKYYG 385
KFIDT+SKFGHG FQT QEK + G
Sbjct: 240 KFIDTTSKFGHGCFQTAQEKRAFMG 264
>gi|355717191|gb|AES05853.1| ribosomal protein L3-like protein [Mustela putorius furo]
Length = 280
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 200/264 (75%), Gaps = 7/264 (2%)
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
KAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+ K+ +QKKAH+MEIQ+N
Sbjct: 1 KAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLN 59
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
GG+VA+K +A EKQI + +VF + E+ID+I VTKG+G +GV +RW +LPRKTH+
Sbjct: 60 GGTVAEKGAWAQARLEKQISVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHK 119
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------HSAMTE 301
GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G+ + ++A T
Sbjct: 120 GLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVRNNASTS 179
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
+D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR+SLL SR ALE I+LK
Sbjct: 180 YDVTDKSITPLGGFPHYGEVNNDFVMLKGCIAGTKKRVITLRKSLLVHHSRRALENIELK 239
Query: 362 FIDTSSKFGHGRFQTTQEKAKYYG 385
FIDT+SKFGHGRFQT QEK + G
Sbjct: 240 FIDTTSKFGHGRFQTAQEKRVFMG 263
>gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 183/223 (82%), Gaps = 2/223 (0%)
Query: 165 HTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVT 224
HTQ+ K+K L QKKAH++E+QVNGGSV+ KV+F FEK++PI +VF KDEM+DIIGVT
Sbjct: 2 HTQVSKVK-LTQKKAHIVEVQVNGGSVSDKVEFCQSLFEKEVPISSVFDKDEMVDIIGVT 60
Query: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 284
KG G V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYHHR E+NKK
Sbjct: 61 KGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYHHRVEINKK 120
Query: 285 IYKLGKASQES-HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
IY++GKA +E ++A D T+K ITPMGGFPHYG VNED++++KG GPKKRV+TLR
Sbjct: 121 IYRIGKALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGPKKRVITLR 180
Query: 344 QSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
+SLL QTSR ALE+I LKFIDTSSK+GHGRFQT EK KYYGR
Sbjct: 181 KSLLPQTSRNALEKIDLKFIDTSSKYGHGRFQTADEKRKYYGR 223
>gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 327
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/277 (57%), Positives = 201/277 (72%), Gaps = 23/277 (8%)
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKK H+MEIQVNGG+++Q
Sbjct: 42 SRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKTHIMEIQVNGGTISQ 100
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 101 KVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 160
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES------------------ 295
CIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 161 CIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVL 220
Query: 296 ----HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC+GP+KRV+TLR++L+ Q
Sbjct: 221 PKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCCMGPRKRVITLRKTLIPQIK 280
Query: 352 RLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+ E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 281 PRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 317
>gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar]
Length = 251
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/242 (62%), Positives = 193/242 (79%), Gaps = 7/242 (2%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
MKKYC V+R++AHTQ+R + L+QKK+HLME+Q+NGGS++ KVD+A E+ IPI VF
Sbjct: 1 MKKYCQVVRIIAHTQMRLLP-LRQKKSHLMEVQLNGGSISDKVDWARERLEQSIPITNVF 59
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
+DEMID+IGVTKG GY+GV +RW +LPRKTHRGLRKVACIGAWHP+RV+F+VARAGQ
Sbjct: 60 TQDEMIDVIGVTKGHGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPSRVAFSVARAGQ 119
Query: 273 NGYHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYL 326
GYHHRTE+NKKIYK+G+ ++A TE+D + K ITP+GGF HYG V D++
Sbjct: 120 KGYHHRTEINKKIYKIGQGYHTKDGKLVKNNAATEYDLSNKSITPLGGFVHYGEVTNDFV 179
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
++KGC +G KKRV+TLR+SLL Q+SR A E+I LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 180 MLKGCTIGVKKRVLTLRKSLLVQSSRRATEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGP 239
Query: 387 LK 388
LK
Sbjct: 240 LK 241
>gi|269859601|ref|XP_002649525.1| 60S ribosomal protein L3 [Enterocytozoon bieneusi H348]
gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 329
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 233/340 (68%), Gaps = 20/340 (5%)
Query: 53 MTHIVRDVE-KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLN 111
MTH++R E + +K+ KE +AVTIIETPP+VV GVVGY T +GL C + A++L+
Sbjct: 1 MTHVIRTKEVRAKNKIQTKEILDAVTIIETPPIVVHGVVGYKNTVKGLERTCIILARNLS 60
Query: 112 EEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKY--CTVIRVLAHTQIR 169
E+V RR +K KA+ K YE D +K+++ + + + +IR++ ++Q+R
Sbjct: 61 EDVIRRMFK-------KAYIPGIK-YE--DLRKNVEYTEDDVNELRKSEIIRLICNSQVR 110
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
+K +KQKK+H+MEIQV GGS+ KV + EK+I ++ VF K E +D IGVTKGKG+
Sbjct: 111 AIKSIKQKKSHIMEIQVGGGSIDDKVSYGISHLEKEIKVNNVFSKSEFLDTIGVTKGKGF 170
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
+GVV RWG T LPRKT++G+RKVACIGA+HP+RV ++VARAGQ G+H RT+ N +Y +G
Sbjct: 171 QGVVKRWGTTILPRKTNKGIRKVACIGAFHPSRVMYSVARAGQVGFHRRTQQNLLVYDIG 230
Query: 290 KASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
Q T+FD T K I PMGGFPHYG V DY+++KGC GP KRVVTLR+ + ++
Sbjct: 231 NGKQ---PIQTDFDLTVKTINPMGGFPHYGQVTNDYIMLKGCVTGPCKRVVTLRKPVHER 287
Query: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
A + + +KF+DTSSK G GRFQT++EK ++G KA
Sbjct: 288 ----ACKNVSIKFVDTSSKIGKGRFQTSEEKRAFFGISKA 323
>gi|358339475|dbj|GAA47534.1| 60S ribosomal protein L3 [Clonorchis sinensis]
Length = 276
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/276 (58%), Positives = 191/276 (69%), Gaps = 50/276 (18%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF P+KR+ R RGK KAFPKD S P LTAFLGYKAGMTHIVR+V++PGSK+HK+E
Sbjct: 1 MGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFLGYKAGMTHIVREVDRPGSKVHKREIV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
E VTI+E PP+V+VG+VGY T RGLR+ TVWA+HL EE RRRFYK+WCKSK
Sbjct: 61 EPVTILECPPMVIVGLVGYAPTARGLRTFKTVWAEHLTEECRRRFYKDWCKSK------- 113
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
KKAH+MEIQVNGG+V+Q
Sbjct: 114 -------------------------------------------KKAHIMEIQVNGGTVSQ 130
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
KVD+ FEKQIPI VF +DEMID+IGVTKGKG++GV +RW +LPRKTH+GLRKVA
Sbjct: 131 KVDWIRQHFEKQIPIVNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVA 190
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
CIG+WHPARV TVARAGQ GY HRTE+NKKIY++G
Sbjct: 191 CIGSWHPARVGSTVARAGQKGYFHRTELNKKIYRIG 226
>gi|392349059|ref|XP_003750279.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Rattus norvegicus]
Length = 358
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/394 (44%), Positives = 240/394 (60%), Gaps = 52/394 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS+R F PRHGSLGF P+K + H GKVK FPKDD SKP LT FL +KA MTHI++ V
Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++P SK++KKE E V I+ETPP+VV+G+VGY++ PRGL + V+A+H++ + ++ FYK
Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW + ++G H +R+MK KAH
Sbjct: 121 NW--------------HLXEEG---------------------LHQILREMK-----KAH 140
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQV G + ++ + ++ VF DE+ID+I TKG GY+GV +
Sbjct: 141 LMEIQVMG-HCGXEARLSW-----REAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKK 194
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LP KTHRGL KVAC+GAWHPARV+F+VA+ GQ GYHH TE NKKI K+G+
Sbjct: 195 LPXKTHRGLPKVACVGAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQGYLIKDGKLI 254
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+ ++K I +GGF HYG V D++ +KGC V KK +T+ + LL QT + A
Sbjct: 255 KNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTKKXTLTICKYLLVQTIQWA 314
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
L++I K DT+ K GHG FQTT+ K + G LK
Sbjct: 315 LKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLK 348
>gi|392341252|ref|XP_003754289.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Rattus norvegicus]
Length = 358
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/394 (44%), Positives = 239/394 (60%), Gaps = 52/394 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS+R F PRHGSLGF P+K + H GKVK FPKDD SKP LT FL +KA MTHI++ V
Sbjct: 1 MSYRNFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++P SK++KKE E V I+ETPP+VV+G+VGY++ PRGL + V+A+H+ + ++ FYK
Sbjct: 61 DRPESKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHIGGKSKKCFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW + ++G H +R+MK KAH
Sbjct: 121 NW--------------HIXEEG---------------------LHQILREMK-----KAH 140
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
LMEIQV G + ++ + ++ VF DE+ID+I TKG GY+GV +
Sbjct: 141 LMEIQVMG-HCGXEARLSW-----REAVNQVFGXDEIIDVIKETKGNGYKGVTRVXHTKK 194
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQE 294
LP KTHRGL KVAC+GAWHPARV+F+VA+ GQ GYHH TE NKKI K+G+
Sbjct: 195 LPXKTHRGLPKVACVGAWHPARVTFSVAQVGQKGYHHXTEXNKKICKIGQGYLIKDGKLI 254
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
++A TE+ ++K I +GGF HYG V D++ +KGC V KK +T+ + LL QT + A
Sbjct: 255 KNNAPTEYHLSDKSINLLGGFVHYGEVTNDFIRLKGCAVRTKKXTLTICKYLLVQTIQWA 314
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
L++I K DT+ K GHG FQTT+ K + G LK
Sbjct: 315 LKKIDPKLNDTTYKVGHGCFQTTEGKRAFIGPLK 348
>gi|345802423|ref|XP_547185.3| PREDICTED: ribosomal protein L3-like [Canis lupus familiaris]
Length = 255
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/239 (61%), Positives = 188/239 (78%), Gaps = 7/239 (2%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
MKKYC VIRV+ HTQ+ K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF
Sbjct: 1 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVF 59
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
++E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ
Sbjct: 60 SQNEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 119
Query: 273 NGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYL 326
GYHHRTE+NKKIY++G+ ++A T +D T+K ITP+GGFPHYG VN D++
Sbjct: 120 KGYHHRTELNKKIYRIGRGLHMEEGKVVKNNAATSYDVTDKSITPLGGFPHYGEVNNDFV 179
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHGRFQT QEK + G
Sbjct: 180 MLKGCIAGTKKRVITLRKSLLVHHSRRALENIELKFIDTTSKFGHGRFQTAQEKRAFMG 238
>gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians]
Length = 254
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 151/240 (62%), Positives = 189/240 (78%), Gaps = 8/240 (3%)
Query: 155 KYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQK 214
KYC VIR AHTQ + +K +QKKAH+MEIQVNGG+++QKVD+A E +P+ +VF
Sbjct: 9 KYCKVIR-YAHTQTKLLK-KRQKKAHIMEIQVNGGTISQKVDWAREKMESSVPVGSVFAM 66
Query: 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 274
DE IDIIGVTKGKG +GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ G
Sbjct: 67 DENIDIIGVTKGKGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKG 126
Query: 275 YHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLI 328
YHHRTE+NKKIY++G+ + ++A T+FD +EK+ITPMGGFPHYG VN D+++I
Sbjct: 127 YHHRTEINKKIYRMGEGTHTKDGKLVKNNASTDFDPSEKNITPMGGFPHYGEVNNDFVMI 186
Query: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KGC +GPKKRV+TLR+SLL + +E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 187 KGCTMGPKKRVLTLRKSLLPSFKKKQMEKINLKFIDTASKFGHGRFQTFEEKNNFMGPLK 246
>gi|284073160|gb|ADB77819.1| 60S ribosomal protein L3 [Klebsormidium flaccidum]
Length = 204
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 179/204 (87%), Gaps = 1/204 (0%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
FEH RHGSLGFLP+KRA R RGKVK++ KDDPSK +L AFLGYKAGMTHI+RDV+KPGS
Sbjct: 1 FEHARHGSLGFLPKKRAKRIRGKVKSWAKDDPSKAPQLQAFLGYKAGMTHIMRDVDKPGS 60
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
KLHKKETCEAVTI+ETPP+V+VGVVGY+KTPRGLRSL TVWAQHL+E V+RRFYK + +S
Sbjct: 61 KLHKKETCEAVTIVETPPMVIVGVVGYIKTPRGLRSLATVWAQHLDESVKRRFYKRFGQS 120
Query: 126 KKKAFTKYTK-KYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
KKKAFTKY K KY +GKK + + LE++KKYC+V+RVLAHTQ++ +KG+ QKKAHLME+
Sbjct: 121 KKKAFTKYVKSKYGDGEGKKGVDSDLERIKKYCSVVRVLAHTQVKLIKGIGQKKAHLMEV 180
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPI 208
Q+NGGSVA KVDFA +FEK++ +
Sbjct: 181 QINGGSVADKVDFAVKYFEKKVGV 204
>gi|124783060|gb|ABN14901.1| ribosomal protein L3, partial [Taenia asiatica]
Length = 224
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/225 (66%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR+ R RGK KAFPKD S P LTAF+G+KAGMTH+VRDV
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRSRRIRGKCKAFPKDRRSLPPHLTAFMGFKAGMTHVVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HKKE E VTI+E PP+V+VG+VGY+ T RGLR+ T+WA+HL+EE RRRFYK
Sbjct: 61 DRPGSKVHKKEIIEPVTILECPPMVIVGIVGYIPTARGLRTFKTIWAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
++CKSK+KAFTK +KK+ + G I ++KMKKYC+VIRV+AHTQ+R MK +QKKAH
Sbjct: 121 DFCKSKRKAFTKASKKWADEAGLAAINNDIKKMKKYCSVIRVIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTK 225
+MEIQVNGG+VAQKVD+A EKQ+P+ VF +DEMID+IGVTK
Sbjct: 180 IMEIQVNGGTVAQKVDWAREHLEKQVPVANVFAQDEMIDVIGVTK 224
>gi|226480250|emb|CAX78789.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 228
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/227 (65%), Positives = 183/227 (80%), Gaps = 1/227 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGK 227
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGK
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGK 226
>gi|217069808|gb|ACJ83264.1| unknown [Medicago truncatula]
Length = 177
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/177 (87%), Positives = 171/177 (96%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA+RHRGKVKAFPKDDP+KP +LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCE VTIIETPP+VVVGVVGYVKTPRGLR+L TVW QHL+EE++RRFYK
Sbjct: 61 EKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
NWCKSKKKAF+KY+K+YE+D+GKK+IQ QLEK+KKY TVIRVLAHTQIRKMKGLKQK
Sbjct: 121 NWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQK 177
>gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus]
Length = 255
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/239 (61%), Positives = 186/239 (77%), Gaps = 7/239 (2%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
MKKYC VIRV+ HTQ+ K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF
Sbjct: 1 MKKYCKVIRVIVHTQM-KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVF 59
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
+ E+ID+I VTKG+G +GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ
Sbjct: 60 SQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQ 119
Query: 273 NGYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYL 326
GYHHRTE+NKKIY++G+ ++A T +D T+K ITP+GGFPHYG VN D++
Sbjct: 120 KGYHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFV 179
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
++KGC G KKRV+TLR+SLL SR ALE I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 180 MLKGCIAGTKKRVITLRKSLLVHHSRRALENIELKFIDTTSKFGHGCFQTAQEKRAFMG 238
>gi|56541782|emb|CAI30273.1| hypothetical protein [Pongo abelii]
Length = 202
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 176/198 (88%), Gaps = 1/198 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+R + L+QKKAH
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFA 198
LMEIQVNGG+VA+K+D+A
Sbjct: 180 LMEIQVNGGTVAEKLDWA 197
>gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
Length = 219
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
GL KKAHLMEIQVNGGS+A KV++A FEK + +VF++DE ID+I VTKG G+EGV
Sbjct: 2 GLSHKKAHLMEIQVNGGSIADKVEYAQNLFEKPFEVSSVFEQDENIDVIAVTKGHGFEGV 61
Query: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
RWG +LPRKTH+GLRKVACIGAWHP++V F+VARAGQ+GYHHRTE+NKKIY++G S
Sbjct: 62 THRWGTKKLPRKTHKGLRKVACIGAWHPSKVMFSVARAGQSGYHHRTELNKKIYRIGSGS 121
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
E +A TE D ++K ITPMGGFPHYG+V D+L++KG G KKRV+T+R+SL+ TSR
Sbjct: 122 DEG-NASTEHDISKKPITPMGGFPHYGIVKNDFLMLKGSIPGTKKRVITIRKSLMVHTSR 180
Query: 353 LALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LE++ LKFIDTSSKFGHG FQT +EKA + G LKA
Sbjct: 181 RDLEKVDLKFIDTSSKFGHGSFQTPEEKAAFLGTLKA 217
>gi|343459071|gb|AEM37694.1| ribosomal protein L3 [Epinephelus bruneus]
Length = 236
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 177/221 (80%), Gaps = 6/221 (2%)
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L+QKK+HLME+Q+NGGS++ KVD+A E+ +P++ VF +DEMID+IG+TKG GY+GV
Sbjct: 6 LRQKKSHLMEVQLNGGSISDKVDWAREKLEQAVPVNNVFTQDEMIDVIGITKGHGYKGVT 65
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 293
+RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 66 SRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQGYH 125
Query: 294 E------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLL 347
++A TE+D + K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL
Sbjct: 126 TKDGKLVKNNASTEYDLSNKSINPLGGFVHYGDVTNDFVMVKGCVVGTKKRVLTLRKSLL 185
Query: 348 KQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
QTSR ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 186 VQTSRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 226
>gi|358443180|gb|AEU11836.1| control protein HCTL036 [Eueides isabella]
Length = 217
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPP+V
Sbjct: 1 GKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ +KM +YC+VIRV+AHTQ++ +K +QKKAH+MEIQVNGG++ KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
P+D+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|358443186|gb|AEU11839.1| control protein HCTL036 [Heliconius aoede]
Length = 217
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPP+V
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW KSKKKAFTK +KK++ + G+K I
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKSKKKAFTKSSKKWQDELGRKSI 120
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ +KM +YC+VIRV+AHTQ++ +K +QKKAH+MEIQVNGG++ KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
P+D+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFTQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|358443188|gb|AEU11840.1| control protein HCTL036 [Heliconius burneyi]
gi|358443190|gb|AEU11841.1| control protein HCTL036 [Heliconius doris]
gi|358443192|gb|AEU11842.1| control protein HCTL036 [Heliconius xanthocles]
gi|358443196|gb|AEU11844.1| control protein HCTL036 [Heliconius hortense]
gi|358443198|gb|AEU11845.1| control protein HCTL036 [Heliconius hewitsoni]
gi|358443202|gb|AEU11847.1| control protein HCTL036 [Heliconius sara]
gi|358443204|gb|AEU11848.1| control protein HCTL036 [Heliconius demeter]
gi|358443206|gb|AEU11849.1| control protein HCTL036 [Heliconius charithonia]
Length = 217
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPP+V
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ +KM +YC+VIRV+AHTQ++ +K +QKKAH+MEIQVNGG++ KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVIRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
P+D+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|358443184|gb|AEU11838.1| control protein HCTL036 [Heliconius hecale]
Length = 217
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPP+V
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK +KK++ + G+K I
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSI 120
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ +KM +YC+V+RV+AHTQ++ +K +QKKAH+MEIQVNGG++ KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
P+D+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|166952267|gb|ABZ04216.1| ribosomal protein rpl3 [Lineus viridis]
Length = 208
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query: 3 HRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
HRKF PRHGSLGFLP+KR+ RHRGKVKAFPKDD +KPC LTAFLGYKAGMTH+VR+ ++
Sbjct: 1 HRKFSAPRHGSLGFLPKKRSKRHRGKVKAFPKDDRTKPCHLTAFLGYKAGMTHLVREADR 60
Query: 63 PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNW 122
PGSK++KKE EAVTI+ETPP++VVG VGYV+TP+GLR+ T++A+HL EE RRRFYKNW
Sbjct: 61 PGSKINKKEIVEAVTIVETPPMIVVGCVGYVETPKGLRTFKTIFAEHLGEECRRRFYKNW 120
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+SKKKAFTKY+KK++ + GKK I+ +KKYC VIRV+AHTQ++ MK +QKKAH+M
Sbjct: 121 YRSKKKAFTKYSKKWQDEAGKKAIECDFRLIKKYCKVIRVIAHTQMKLMKK-RQKKAHIM 179
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAV 211
EIQVNGG+V+QKV+F EK+I I+ V
Sbjct: 180 EIQVNGGTVSQKVNFVREHMEKKISINTV 208
>gi|358443200|gb|AEU11846.1| control protein HCTL036 [Heliconius ismenius]
Length = 217
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 27 GKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVV 86
GKVKAFPKDD SKP LTAF+GYKAGMTH+VR+ ++PGSK++KKE EAVT+IETPP+V
Sbjct: 1 GKVKAFPKDDSSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTVIETPPMVC 60
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
VGVVGY++TP GLR+L TVWA+H++E+ RRRFYKNW K KKKAFTK KK++ + G+K I
Sbjct: 61 VGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWYKCKKKAFTKSNKKWQDELGRKSI 120
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQI 206
+ +KM +YC+V+RV+AHTQ++ +K +QKKAH+MEIQVNGG++ KV +A EK I
Sbjct: 121 EKDFKKMIRYCSVVRVIAHTQMKLLKQ-RQKKAHIMEIQVNGGNIEDKVKWAREHLEKPI 179
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
P+D+VF +DEMID IGVTKGKGY+GV +RW +LPRK
Sbjct: 180 PVDSVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLPRK 217
>gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3, partial [Ascaris suum]
Length = 222
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 171/210 (81%), Gaps = 3/210 (1%)
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
MEIQVNGG+V +KVD+A EKQ+ +D+VF +DEMID IGVTKGKG++GV +RW +L
Sbjct: 1 MEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKL 60
Query: 242 PRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA---SQESHSA 298
PRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYHHRTE+NKKIY+LGK+ + +
Sbjct: 61 PRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYHHRTEVNKKIYRLGKSCLTEEGKRNG 120
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE+D TEK I PMGGFPHYG+VN+D+++I+GCCVG KKR +TLR+SL+ QT R A E+I
Sbjct: 121 GTEYDITEKSINPMGGFPHYGLVNQDFVMIRGCCVGSKKRPITLRKSLIVQTKRFAHEKI 180
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
LK+IDTSSK GHGRFQT EK + G+LK
Sbjct: 181 NLKWIDTSSKLGHGRFQTHAEKRAFMGKLK 210
>gi|226475930|emb|CAX72055.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 217
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 174/218 (79%), Gaps = 1/218 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMI 218
+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMI
Sbjct: 180 IMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMI 217
>gi|224105031|ref|XP_002333867.1| predicted protein [Populus trichocarpa]
gi|222838758|gb|EEE77109.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/152 (90%), Positives = 147/152 (96%)
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTE+NKKIYKLGK QESH
Sbjct: 1 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHC 60
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
A+TE+DRTEKDITP+GGFPHYGVV EDYL+IKGCCVGPKKRVVTLRQSLLKQTSR+A+EE
Sbjct: 61 AVTEYDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKRVVTLRQSLLKQTSRVAMEE 120
Query: 358 IKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
IKLKFIDTSSKFGHGRFQTT+EKAK+YGRLK
Sbjct: 121 IKLKFIDTSSKFGHGRFQTTEEKAKFYGRLKT 152
>gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 252
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/236 (60%), Positives = 174/236 (73%), Gaps = 22/236 (9%)
Query: 175 KQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVT 234
+QKKAH+MEIQVNGG+++QKVD+ FEKQIP+ VF +DEMID+IGVTKGKG++GV +
Sbjct: 7 RQKKAHIMEIQVNGGTISQKVDWIRQHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTS 66
Query: 235 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 294
RW +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRTE+NKKIY++G Q
Sbjct: 67 RWHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRTELNKKIYRIGMGLQA 126
Query: 295 S----------------------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCC 332
+A TEFD T K+ITP+GGFPHYG V DY++IKGCC
Sbjct: 127 QLEVAKAEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPHYGEVRNDYVMIKGCC 186
Query: 333 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+GP+KRV+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT EK G LK
Sbjct: 187 MGPRKRVITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTRAEKQAIMGPLK 242
>gi|284073166|gb|ADB77822.1| 60S ribosomal protein L3 [Phyllodictyon orientale]
Length = 236
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/239 (68%), Positives = 189/239 (79%), Gaps = 3/239 (1%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKFEH R GSLGFLP+KR R RG+VK+FPKDDPSKP LTAF+G+KAGMTHIVRDV+
Sbjct: 1 SHRKFEHARCGSLGFLPKKRCRRGRGRVKSFPKDDPSKPPHLTAFMGFKAGMTHIVRDVD 60
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
KPGSK+HKKE CE VTI+E PP+VVVGVVGY T RG R++ WA H+N+ +RRRFYKN
Sbjct: 61 KPGSKVHKKEVCEPVTIVECPPMVVVGVVGYATTHRGQRTIGCAWAAHINDTLRRRFYKN 120
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W ++KKKAF K+ KY DDG K I AQLE +KK TVIRVLAHTQ M L KKAHL
Sbjct: 121 WYRAKKKAFKKHATKY--DDGAKTIMAQLEHLKKEATVIRVLAHTQ-PDMVRLGIKKAHL 177
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+EIQVNGG+ KVDFAY FEK+I + +F KDEMID I +TKG+G +GVVTRWGVTR
Sbjct: 178 IEIQVNGGTAPDKVDFAYNLFEKEIRVGTIFGKDEMIDTIAITKGRGTQGVVTRWGVTR 236
>gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus]
gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus]
gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus]
gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus]
gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus]
gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus]
Length = 240
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/222 (59%), Positives = 171/222 (77%), Gaps = 6/222 (2%)
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
K+ +QKKAH+MEIQ+NGG+VA+KV + EKQ+P+ +VF + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGV 61
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 290 KASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
+ ++A T +D T+K ITP+GGFPHYG VN D++++KGC G KKRV+TLR
Sbjct: 122 RGLHMEDGKMVRNNASTSYDVTDKSITPLGGFPHYGEVNNDFIMLKGCIAGTKKRVITLR 181
Query: 344 QSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYG 385
+SLL SR ALE I+LKFIDT+SKFGHG FQT QEK + G
Sbjct: 182 KSLLVHHSRRALENIELKFIDTTSKFGHGCFQTAQEKRAFMG 223
>gi|414587237|tpg|DAA37808.1| TPA: hypothetical protein ZEAMMB73_880497, partial [Zea mays]
Length = 162
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/151 (87%), Positives = 142/151 (94%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYK
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLE 151
NWCKSKKKAFTKY KYE D GKK+IQ QLE
Sbjct: 121 NWCKSKKKAFTKYALKYENDAGKKEIQLQLE 151
>gi|376337862|gb|AFB33487.1| hypothetical protein 2_6618_01, partial [Abies alba]
gi|376337864|gb|AFB33488.1| hypothetical protein 2_6618_01, partial [Abies alba]
gi|376337866|gb|AFB33489.1| hypothetical protein 2_6618_01, partial [Abies alba]
Length = 141
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/141 (90%), Positives = 138/141 (97%)
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 264
Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
FTVARAGQNGYHHRTEMNKKIYK+GKA QESH+AMTEFDRTEKDITPMGGFPHYG+V +D
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKAGQESHNAMTEFDRTEKDITPMGGFPHYGIVKDD 120
Query: 325 YLLIKGCCVGPKKRVVTLRQS 345
Y++I+GCCVG KKRVVTLRQS
Sbjct: 121 YIMIRGCCVGTKKRVVTLRQS 141
>gi|376337876|gb|AFB33494.1| hypothetical protein 2_6618_01, partial [Pinus cembra]
Length = 141
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 128/141 (90%), Positives = 138/141 (97%)
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 264
Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
FTVARAGQNGYHHRTEMNKKIYK+GK+ QESH+AMTEFDRTEKDITPMGGFPHYGVV +D
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHNAMTEFDRTEKDITPMGGFPHYGVVKDD 120
Query: 325 YLLIKGCCVGPKKRVVTLRQS 345
Y++I+GCCVG KKRVVTLRQS
Sbjct: 121 YIMIRGCCVGTKKRVVTLRQS 141
>gi|295646729|gb|ADG23115.1| 60S ribosomal protein L3 [Rhizoplaca chrysoleuca]
Length = 180
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/182 (73%), Positives = 158/182 (86%), Gaps = 2/182 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRASRHRGKVK+FPKD+P +P LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRASRHRGKVKSFPKDNPKEPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PG+KLHKKE EAVT+IETPP++VVG+VGY++TPRGLRSL TVWA+HL++EV+RRFYK
Sbjct: 61 DRPGAKLHKKEIVEAVTVIETPPMMVVGIVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK+ D G K I +LE++KKYCTV+RVLAH Q+ K LKQKKAH
Sbjct: 121 NWYKSKKKAFTKYAKKHAEDSG-KPINRELERIKKYCTVVRVLAHHQVSKT-PLKQKKAH 178
Query: 181 LM 182
LM
Sbjct: 179 LM 180
>gi|361068061|gb|AEW08342.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|376337878|gb|AFB33495.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|376337880|gb|AFB33496.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|376337882|gb|AFB33497.1| hypothetical protein 2_6618_01, partial [Pinus mugo]
gi|383162934|gb|AFG64168.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162936|gb|AFG64169.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162938|gb|AFG64170.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162940|gb|AFG64171.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162942|gb|AFG64172.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162944|gb|AFG64173.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162946|gb|AFG64174.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162948|gb|AFG64175.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162950|gb|AFG64176.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162952|gb|AFG64177.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162954|gb|AFG64178.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162956|gb|AFG64179.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162958|gb|AFG64180.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162960|gb|AFG64181.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
gi|383162962|gb|AFG64182.1| Pinus taeda anonymous locus 2_6618_01 genomic sequence
Length = 141
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/141 (90%), Positives = 137/141 (97%)
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 264
Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
FTVARAGQNGYHHRTEMNKKIYK+GK+ QESH AMTEFDRTEKDITPMGGFPHYGVV +D
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKSDQESHKAMTEFDRTEKDITPMGGFPHYGVVKDD 120
Query: 325 YLLIKGCCVGPKKRVVTLRQS 345
Y++I+GCC+G KKRVVTLRQS
Sbjct: 121 YIMIRGCCMGTKKRVVTLRQS 141
>gi|284073152|gb|ADB77815.1| 60S ribosomal protein L3 [Bryopsis sp. EE4]
Length = 217
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 165/220 (75%), Gaps = 5/220 (2%)
Query: 24 RHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPP 83
R +GK+K+FPKDD S+P LT F+GYKAG THIVR+V++P SKLHKKETCE VTI+E PP
Sbjct: 1 RGKGKIKSFPKDDASQPPHLTGFMGYKAGSTHIVREVDRPNSKLHKKETCETVTIVECPP 60
Query: 84 LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGK 143
++VV +GYV T G S TVWAQHL +E++RRFYK W S+++AF Y KKY+ DG
Sbjct: 61 MIVVAAIGYVSTANGPVSKYTVWAQHLTDEMKRRFYKRWHTSQRRAFCNYAKKYQ--DGS 118
Query: 144 KDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLK--QKKAHLMEIQVNGGSVAQKVDFAYGF 201
+I+ L KMK C IR+LAHTQI K LK QKK H MEIQVNGG+V KVDFAY
Sbjct: 119 TEIEDTLRKMKDECVSIRILAHTQISKTP-LKRFQKKGHCMEIQVNGGTVPDKVDFAYKL 177
Query: 202 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
FEK + +D+VFQ +EMID I VTKG G EGVVTRWGVTRL
Sbjct: 178 FEKGVSVDSVFQPNEMIDTIAVTKGCGTEGVVTRWGVTRL 217
>gi|160550199|gb|ABX44804.1| putative 60S ribosomal protein RPL3 [Flustra foliacea]
Length = 185
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/186 (70%), Positives = 158/186 (84%), Gaps = 1/186 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHG+LGF+P+KR+ RHRGKVK+FP DDP KP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGNLGFIPKKRSKRHRGKVKSFPSDDPRKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSK++KKE EAVTIIETPPLVVVGV GY++TPRGLR+L T+WA+HL+EE RRRFYK
Sbjct: 61 NRPGSKVNKKEIVEAVTIIETPPLVVVGVTGYIETPRGLRTLGTIWAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW +KKKAFTKY KK++ +DGKK I+ K+ K+CT+IRVL HTQ+ K+ +QKKA+
Sbjct: 121 NWYHAKKKAFTKYAKKWQDEDGKKVIERDFNKLSKHCTIIRVLCHTQM-KLLNQRQKKAN 179
Query: 181 LMEIQV 186
LMEIQV
Sbjct: 180 LMEIQV 185
>gi|379994229|gb|AFD22741.1| ribosomal protein L3, partial [Collodictyon triciliatum]
Length = 209
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
Query: 193 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 252
+KVDFA FEK I + VF ++E+ID + VTKG GY+GV++RWGVT+LPRKTH+GLRKV
Sbjct: 1 EKVDFALSLFEKPIAVGTVFAQNELIDTMAVTKGHGYKGVISRWGVTKLPRKTHKGLRKV 60
Query: 253 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPM 312
ACIGAWHPARV++TV RAGQ G+ HRTE NKKIY++G + ++ +A TE D T K ITPM
Sbjct: 61 ACIGAWHPARVAWTVPRAGQKGFFHRTETNKKIYRVG-SGEDKQNATTEADGTVKTITPM 119
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHG 372
GGFPHYG V D+L++KGC GPKKRVVTLR+SL T R ALE+I LKFIDTSSKFGHG
Sbjct: 120 GGFPHYGPVRNDFLIVKGCVTGPKKRVVTLRKSLRTPTKRWALEQINLKFIDTSSKFGHG 179
Query: 373 RFQTTQEKAKYYG 385
RFQTT+EK K+YG
Sbjct: 180 RFQTTEEKRKFYG 192
>gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans]
gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans]
Length = 370
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 225/383 (58%), Gaps = 25/383 (6%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPR GSLGFLP+KR++R K + + ++ F K TH++R
Sbjct: 1 MSHRKFEHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRIC 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ---HLNEEVRRR 117
SK ++ + VT++E PP+ VVG+ Y + L L T+ Q +L++
Sbjct: 61 NIVSSKSYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTIKLQRGLNLDQSKDIS 120
Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
F + FT +T L+ + K+ + R L T I+ +K+K
Sbjct: 121 F-------DSQFFTNFT-------------YSLQFIIKHSVIFRFLCCTFIKTNSMIKKK 160
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
+ E + GGS K++F K+I I+++F ++++ID IG+TKG G +GVV+RWG
Sbjct: 161 --YFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFHENDIIDAIGITKGHGTKGVVSRWG 218
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
+TRLPRKTHRGLRKVACIG W P+RV++T++RAGQ GYH RT NKKIYK+G S+
Sbjct: 219 ITRLPRKTHRGLRKVACIGPWTPSRVAWTISRAGQKGYHKRTLFNKKIYKIGSEENFSYY 278
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
+ + D K + MGGF +G +N DYL+IKG G KR + LR+++ + S + E+
Sbjct: 279 SNSLSDSIVKSVNCMGGFKKFGFINNDYLIIKGSMTGSSKRPILLRKNIKNKISSVITEK 338
Query: 358 IKLKFIDTSSKFGHGRFQTTQEK 380
I LK++DTSSK GHGR++++ +K
Sbjct: 339 IILKYVDTSSKRGHGRYESSADK 361
>gi|376337868|gb|AFB33490.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337870|gb|AFB33491.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337872|gb|AFB33492.1| hypothetical protein 2_6618_01, partial [Larix decidua]
gi|376337874|gb|AFB33493.1| hypothetical protein 2_6618_01, partial [Larix decidua]
Length = 141
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 125/141 (88%), Positives = 136/141 (96%)
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 264
Q+PIDA+FQKDEMID+IGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS
Sbjct: 1 QVPIDALFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 60
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
FTVARAGQNGYHHRTEMNKKIYK+GK +ESH AMTEFDRTEKDITPMGGFPHYG+V +D
Sbjct: 61 FTVARAGQNGYHHRTEMNKKIYKIGKIDEESHKAMTEFDRTEKDITPMGGFPHYGIVKDD 120
Query: 325 YLLIKGCCVGPKKRVVTLRQS 345
Y++I+GCC+G KKRVVTLRQS
Sbjct: 121 YIMIRGCCMGTKKRVVTLRQS 141
>gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like,
partial [Ailuropoda melanoleuca]
Length = 355
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/389 (42%), Positives = 230/389 (59%), Gaps = 72/389 (18%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHGSLGFLP+K +S H G+ +FPKDD SKP LTAFLGYKAGMTHIV +V
Sbjct: 5 ISHRKFSIPRHGSLGFLPQKCSSWHHGRXTSFPKDDSSKPIHLTAFLGYKAGMTHIVXEV 64
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+PGSK+ KKE E VTI+E P + VVG +GY +T +GL +L T++A+H++++ +R FYK
Sbjct: 65 SRPGSKVKKKEIVEDVTIVEAPSM-VVGTMGYEETIQGLCTLKTIFAEHIHDKCKRHFYK 123
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT-QIRKMKGLKQKKA 179
NW KS KKAF KY K++ +DGK+ ++ M+ + + H + K KG K+ +
Sbjct: 124 NWGKS-KKAFNKYC-KWQDNDGKQQLEKDFNSMRYGQIIHDEMIHVISVTKGKGYKEVTS 181
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
H + K++P
Sbjct: 182 H--------------------WHTKKLPC------------------------------- 190
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
KTH+GL KV CIGAWHPA+V+F++A AGQ GYHH TE+NKKIYK+G++ +
Sbjct: 191 ----KTHQGLCKVGCIGAWHPAQVAFSMAWAGQKGYHHCTEINKKIYKIGQSYLIKDGKL 246
Query: 300 TEFDRT-EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
+ + + + D+T + D+++ KGC + KK+V+TL + LL Q R AL EI
Sbjct: 247 IKNNASADYDLT----------MTNDFVMHKGCVI-TKKQVLTLHKLLLVQIKRQAL-EI 294
Query: 359 KLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
LKFIDT+SKFGH FQT ++K ++ G L
Sbjct: 295 DLKFIDTTSKFGHDXFQTVEDKKEFMGPL 323
>gi|225006193|dbj|BAH28892.1| ribosomal protein L3 [Polypedilum vanderplanki]
Length = 204
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGS+ F P+KRA RHRGKVKAFPKDDP+KP LT F+ YKAGMTHIVR+ +
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRAQRHRGKVKAFPKDDPTKPVHLTCFISYKAGMTHIVREAD 61
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PGSK++KKE EAVTI+ETPP+VVVG VGY++TP G R+LC VWAQHL+EE RRRFYKN
Sbjct: 62 RPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPHGPRALCNVWAQHLSEECRRRFYKN 121
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHL 181
W SKKKAFTK +KK+ D GKK I+ +KM +YC IR++ H+QIR +K QKKAH+
Sbjct: 122 WYSSKKKAFTKASKKWTDDLGKKTIEDNFKKMIRYCKYIRIIVHSQIRLIKQ-GQKKAHI 180
Query: 182 MEIQVNGGSVAQKVDFA 198
MEIQ+NGG++ KV +
Sbjct: 181 MEIQLNGGTIEDKVQWV 197
>gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris]
Length = 207
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/202 (63%), Positives = 159/202 (78%), Gaps = 6/202 (2%)
Query: 175 KQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVT 234
+QKKAH+MEIQ+NGGSV KV + EK I + VF +DEM+D +GVTKGKG++GV +
Sbjct: 6 RQKKAHIMEIQLNGGSVEDKVKWVRENLEKPIQVCNVFGQDEMVDCVGVTKGKGFKGVTS 65
Query: 235 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 294
RW +LPRKTH+GLRKV CIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 66 RWHTKKLPRKTHKGLRKVXCIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGVHT 125
Query: 295 ------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK 348
++A TE+D T+K ITPMGGFPHYG VN D+++IKGCC+G KKR++TLR+SLL+
Sbjct: 126 KDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLR 185
Query: 349 QTSRLALEEIKLKFIDTSSKFG 370
T R ALE+IKLKFIDTSSK G
Sbjct: 186 HTKRSALEQIKLKFIDTSSKMG 207
>gi|414587225|tpg|DAA37796.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 239
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 128/146 (87%), Positives = 138/146 (94%)
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
KT RGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GKA QE+H A TEFD
Sbjct: 94 KTPRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQETHDASTEFD 153
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
RTEKDITPMGGFPHYG+V DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI
Sbjct: 154 RTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 213
Query: 364 DTSSKFGHGRFQTTQEKAKYYGRLKA 389
DTSSKFGHGRFQTT EK +++G+LKA
Sbjct: 214 DTSSKFGHGRFQTTDEKQRFFGKLKA 239
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 101/109 (92%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQH 109
EKPGSKLHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR + + A H
Sbjct: 61 EKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRKVACIGAWH 109
>gi|149065895|gb|EDM15768.1| ribosomal protein L3, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 155/178 (87%), Gaps = 1/178 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKK
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMR-LLPLRQKK 177
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 176 KKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 228
>gi|84998984|ref|XP_954213.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305211|emb|CAI73536.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 203
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 160/197 (81%), Gaps = 4/197 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLP+KR+ HR K+++FPKDD +KP LTAF+GYKAGMTH+V +V
Sbjct: 1 MSHRKFERPRSGSLGFLPKKRSRTHRAKIRSFPKDDITKPPHLTAFIGYKAGMTHVVTEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSKLHKKE EAVTI+ETPP++VVG+VGYV+TPRGL+ L TVWA HL++E+RRRFYK
Sbjct: 61 DRPGSKLHKKEIVEAVTIVETPPMIVVGLVGYVETPRGLKVLGTVWAGHLSDELRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KKY +G ++ +L+++K Y TVIR L HTQ K L +KAH
Sbjct: 121 NWYKSKKKAFTKYAKKYVETNG---MELELKRLKNYSTVIRALLHTQPSKT-SLSLRKAH 176
Query: 181 LMEIQVNGGSVAQKVDF 197
L+E+Q+NGG++ QKV
Sbjct: 177 LLEVQINGGTIDQKVSI 193
>gi|224095129|ref|XP_002195484.1| PREDICTED: 60S ribosomal protein L3-like [Taeniopygia guttata]
Length = 177
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 149/168 (88%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V+VG+VGYV+TPRGLRS T++A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFKTIFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI 168
NW KSKKKAFTKY KK++ +DGKK ++ MKKYC VIRV+AHTQ+
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVMAHTQV 168
>gi|148672668|gb|EDL04615.1| mCG11520, isoform CRA_a [Mus musculus]
Length = 238
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/178 (71%), Positives = 154/178 (86%), Gaps = 1/178 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDD SKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
NW KSKKKAFTKY KK++ D GKK ++ MKKYC VIR++AHTQ+R + L+QKK
Sbjct: 121 NWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMR-LLPLRQKK 177
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 176 KKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 228
>gi|68065494|ref|XP_674730.1| ribosomal protein L3 [Plasmodium berghei strain ANKA]
gi|56493491|emb|CAH94107.1| ribosomal protein L3, putative [Plasmodium berghei]
Length = 225
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 167/231 (72%), Gaps = 6/231 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLHKKE EA TI+E P+VVVG+VGY +TP+GL+ L VWA H+++E RRR+YK
Sbjct: 61 DKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS KKAFTK +T K +++KYCT++R + HTQ K L+ KKAH
Sbjct: 121 NWYKSDKKAFTKCLNIPDTTKEK-----LYNRIEKYCTILRAICHTQPSKTP-LRLKKAH 174
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
+MEIQ+NGG + K++F EK IP+ VF +EMID+I VTKG G +G
Sbjct: 175 IMEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGTKG 225
>gi|383132709|gb|AFG47248.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
Length = 143
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/139 (87%), Positives = 135/139 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 65 EKPGSKLHKKETCEAVTVIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124
Query: 121 NWCKSKKKAFTKYTKKYET 139
NW ++KKKAFTKY KKY++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143
>gi|361067623|gb|AEW08123.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
gi|383132710|gb|AFG47249.1| Pinus taeda anonymous locus 2_207_02 genomic sequence
Length = 143
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 121/139 (87%), Positives = 135/139 (97%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKRA RHRGKVK+FP+DDPSKPC+LTAFLGYKAGMTHIVR+V
Sbjct: 5 MSHRKFEHPRHGSLGFLPRKRARRHRGKVKSFPRDDPSKPCKLTAFLGYKAGMTHIVREV 64
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKLHKKETCEAVT+IETPP+V+VGVVGY+KTPRGLR+L TVWAQHL+EEVRRRFYK
Sbjct: 65 EKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLNTVWAQHLSEEVRRRFYK 124
Query: 121 NWCKSKKKAFTKYTKKYET 139
NW ++KKKAFTKY KKY++
Sbjct: 125 NWYRAKKKAFTKYAKKYDS 143
>gi|156376964|ref|XP_001630628.1| predicted protein [Nematostella vectensis]
gi|156217652|gb|EDO38565.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 145/171 (84%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR RHRGKVK+FPKDD + P LTAF+G+KAGMTHI+R+V
Sbjct: 1 MSHRKFEAPRHGSLGFLPRKRCKRHRGKVKSFPKDDNTLPPHLTAFIGFKAGMTHILREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
EKPGSKL+KKE EAVTIIETPP++VVGVVGY++TPRG+R L T+WA+HL+EE +RRFYK
Sbjct: 61 EKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLKTIWAEHLSEECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
NWC SKKKAFTK +K++ DDGKK I+ MKKYC VIRV+ HTQ K+
Sbjct: 121 NWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVICHTQNAKL 171
>gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana]
Length = 194
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/180 (67%), Positives = 144/180 (80%), Gaps = 6/180 (3%)
Query: 215 DEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNG 274
DE ID+IG TKGKGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ G
Sbjct: 1 DENIDVIGTTKGKGYKGVTSRWHTRKLPRKTHKGLRKVACIGAWHPSRVKFTVARAGQKG 60
Query: 275 YHHRTEMNKKIYKLGKASQE------SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLI 328
YHHRTEMNKKIY++G ++A TE+D +EK ITPMGGFPHYG VN D+++I
Sbjct: 61 YHHRTEMNKKIYRIGAGIHTKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMI 120
Query: 329 KGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
KGCCVG KKRV+TLR+SL+ QT R ALE+I LKFIDT+SKFGHGRFQT +KA + G K
Sbjct: 121 KGCCVGSKKRVLTLRKSLVPQTKRSALEKITLKFIDTASKFGHGRFQTAADKAAFMGPTK 180
>gi|188572405|gb|ACD65109.1| putative 60S ribosomal protein RPL3 [Novocrania anomala]
Length = 191
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 131/192 (68%), Positives = 167/192 (86%), Gaps = 1/192 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLP+KR+ RHRGK+KAFPKDDPSKP +TAF+GYKAGM+HIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPKKRSKRHRGKIKAFPKDDPSKPVHMTAFIGYKAGMSHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK +KKE EAVTI+E+PP++VVGVVGY++TPRGLR T++A+HL+EE RRRFYK
Sbjct: 61 DRPGSKTNKKEVVEAVTIVESPPVIVVGVVGYIETPRGLRPFKTIFAEHLSEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW K+KKKAFTKY KK++ +DGKKDI+ +M+KYC VIRV+ HTQI+ +K +QKKAH
Sbjct: 121 NWYKAKKKAFTKYAKKWQDEDGKKDIEKDFAQMRKYCKVIRVVVHTQIKVLKK-RQKKAH 179
Query: 181 LMEIQVNGGSVA 192
++EI +NGG++A
Sbjct: 180 ILEIPLNGGTIA 191
>gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/171 (73%), Positives = 141/171 (82%), Gaps = 1/171 (0%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
M+DIIGVTKG G V TRWGVTRL RKTHRGLRKVACIGAWHPARV F V RAGQ GYH
Sbjct: 1 MVDIIGVTKGHGNTSVTTRWGVTRLARKTHRGLRKVACIGAWHPARVQFQVPRAGQMGYH 60
Query: 277 HRTEMNKKIYKLGKASQES-HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGP 335
HR E+NKKIY++GKA +E ++A D T+K ITPMGGFPHYG VNED++++KG GP
Sbjct: 61 HRVEINKKIYRIGKALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGP 120
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
KKRV+TLR+SLL QTSR ALE+I LKFIDTSSK+GHGRFQT EK KYYGR
Sbjct: 121 KKRVITLRKSLLPQTSRNALEKIDLKFIDTSSKYGHGRFQTADEKRKYYGR 171
>gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e, partial [Diaphorina citri]
Length = 201
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%), Gaps = 6/178 (3%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MID IGVTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1 MIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60
Query: 277 HRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKG 330
HRTE+NKKIY++G ++A T++D TEK ITPMGGFPHYG VN D+L+IKG
Sbjct: 61 HRTELNKKIYRMGAGIHTKDGKVIKNNASTDYDLTEKSITPMGGFPHYGEVNNDFLMIKG 120
Query: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
CC+GPKKRV+TLR+SLL T R+ALE+I LKFIDTS+KFGHGRFQT +K + G LK
Sbjct: 121 CCMGPKKRVITLRKSLLVHTKRVALEKINLKFIDTSAKFGHGRFQTPADKLAFMGYLK 178
>gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum]
Length = 193
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 141/178 (79%), Gaps = 6/178 (3%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MID IGVTKG+GY+GV +RW +LPRKTH+GLRKVACIGAWHP+RV FTVARAGQ GYH
Sbjct: 1 MIDCIGVTKGRGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVQFTVARAGQKGYH 60
Query: 277 HRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKG 330
HRTE+NKKIY++G ++A TE+D TEK ITPMGGFPHYG VN D+L+IKG
Sbjct: 61 HRTEINKKIYRIGLGIHTKDGKVIKNNASTEYDLTEKTITPMGGFPHYGEVNNDFLMIKG 120
Query: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
CCVGPKKRV+T +SLL T R ALE I LKFIDTSSKFGHGRFQT +KA + G LK
Sbjct: 121 CCVGPKKRVITFCKSLLVHTKRAALESINLKFIDTSSKFGHGRFQTVADKAAFMGPLK 178
>gi|414587233|tpg|DAA37804.1| TPA: hypothetical protein ZEAMMB73_880497 [Zea mays]
Length = 137
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 118/134 (88%), Positives = 128/134 (95%)
Query: 171 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 230
MKGLKQKKAHLMEIQVNGG++A KVD+ Y FFEK++P+DAVFQKDEMIDIIGVTKGKGYE
Sbjct: 1 MKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYE 60
Query: 231 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK
Sbjct: 61 GVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGK 120
Query: 291 ASQESHSAMTEFDR 304
A QE+H A TEFDR
Sbjct: 121 AGQETHDASTEFDR 134
>gi|226480234|emb|CAX78781.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 215
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGF P+KR R RGK KAFP+D S P LTAF+GYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFTPKKRCRRIRGKCKAFPRDRRSLPPHLTAFMGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK+HK+E E VTI+E PP+V+VG+VGY T +GLR+ TVWA+HL EE RRRFYK
Sbjct: 61 DRPGSKVHKREVVEPVTIMECPPMVIVGMVGYAPTAKGLRTFKTVWAEHLTEECRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+WCKSKKKAFTK ++K+ + G I L+K+KKYCTV+R +AHTQ+R MK +QKKAH
Sbjct: 121 DWCKSKKKAFTKASRKWADEAGLALINRDLKKIKKYCTVVRAIAHTQMRLMKH-RQKKAH 179
Query: 181 LMEIQVNGGSVAQK 194
+MEIQVN G +K
Sbjct: 180 IMEIQVNVGLFHKK 193
>gi|6683575|dbj|BAA89259.1| ribosomal protein L3 [Bombyx mori]
Length = 171
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 146/169 (86%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTIIETPP+V VGVVGY++TP GLR+L TVWA+H++E+ RRRFYK
Sbjct: 61 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIR 169
NW K KKKAFTK +KK++ + G+K I+ +KM +YC+V+RV+AHTQ++
Sbjct: 121 NWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMK 169
>gi|71416007|ref|XP_810050.1| ribosomal protein L13 [Trypanosoma cruzi strain CL Brener]
gi|70874525|gb|EAN88199.1| ribosomal protein L13, putative [Trypanosoma cruzi]
Length = 221
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 165/221 (74%), Gaps = 2/221 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+V++FPKDDPS+ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRVRSFPKDDPSQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP G +++ TVWA H + E RRRFYK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG--LKQKK 178
NW +S + AFTK + T +G+ L+ K +IRV+AHTQ+RK++ + KK
Sbjct: 121 NWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAHTQLRKLRNNRVGVKK 180
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMID 219
AH+ EIQ+NGG++A+K++ A EK++ ID++FQ+ E D
Sbjct: 181 AHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCD 221
>gi|324520529|gb|ADY47657.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 193
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/164 (68%), Positives = 141/164 (85%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
KF PRHGS+GF P+KR+ RHRGKVKAFPKDDP+KP LTAF+G+KAGMTHIVR+V+KPG
Sbjct: 10 KFSAPRHGSMGFTPKKRSRRHRGKVKAFPKDDPTKPIHLTAFIGFKAGMTHIVREVDKPG 69
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
SK++KKE EAVTI+ETPP+V+VG+VGY+ TPRG R TVWA+HL+E+ RRRFYKNW
Sbjct: 70 SKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFKTVWAEHLSEDCRRRFYKNWHT 129
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI 168
SKKKAF K+ KK++ +DG+K I++ L KMKKYC+ IRV+AHTQ+
Sbjct: 130 SKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVIAHTQV 173
>gi|402869396|ref|XP_003898748.1| PREDICTED: 60S ribosomal protein L3-like [Papio anubis]
Length = 327
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSKKKAFTKY KK++ +DGKK ++ MKK HT +R + +
Sbjct: 121 NWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKSKINTN---HTNVRTRTQIASTRKP 177
Query: 181 LMEIQVNGGSVAQ 193
+I + G +++
Sbjct: 178 THQILLKAGVLSK 190
>gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis]
Length = 178
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 137/168 (81%), Gaps = 6/168 (3%)
Query: 227 KGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIY 286
KGY+GV +RW +LPRKTH+GLRKVACIGAWHP+RVSFTVARAGQ GYHHRTE+NKKIY
Sbjct: 1 KGYKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEVNKKIY 60
Query: 287 KLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVV 340
++G ++A TE+D TEK ITPMGGFPHYG VN D+++IKGCC+GPKKR++
Sbjct: 61 RIGAGIHTKDGKVIKNNASTEYDLTEKSITPMGGFPHYGEVNNDFIMIKGCCMGPKKRII 120
Query: 341 TLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
TLR+SLL T R+ALE+I LKFIDT+SKFGHGRFQT +KA + G LK
Sbjct: 121 TLRKSLLVHTKRVALEKINLKFIDTASKFGHGRFQTADDKAAFMGPLK 168
>gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 173
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
M+D++GVTKG G +GVV+R+GVTRLPRKTHRGLRKVACIG+WHPARV F V R GQ GYH
Sbjct: 1 MLDVLGVTKGHGVKGVVSRYGVTRLPRKTHRGLRKVACIGSWHPARVQFQVPRHGQKGYH 60
Query: 277 HRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPK 336
RTE NKKIY++G + + + T+ D TEK ITPMGGFPHYGVV ED+L++KGC G K
Sbjct: 61 KRTERNKKIYRIGLGNCNRNGS-TDSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPGTK 119
Query: 337 KRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
KRV+TLR++LL QTSR +L E+ LKFIDTSSK+GHGRFQT+ EK +YG LK
Sbjct: 120 KRVITLRKTLLPQTSRNSLSEVNLKFIDTSSKWGHGRFQTSDEKKSFYGPLKT 172
>gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum]
Length = 132
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/132 (84%), Positives = 121/132 (91%)
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 236
KKAHLMEIQVNGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIGVTKGKGY TRW
Sbjct: 1 KKAHLMEIQVNGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKGYRRCRTRW 60
Query: 237 GVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
GVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKK+YK+GK QE+H
Sbjct: 61 GVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKVGQETH 120
Query: 297 SAMTEFDRTEKD 308
A TEFDRTEKD
Sbjct: 121 DASTEFDRTEKD 132
>gi|324516200|gb|ADY46457.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 204
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 159/236 (67%), Gaps = 44/236 (18%)
Query: 153 MKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVF 212
MKKYC+ IRV+AHTQ++ MK ++KKAH+MEIQVNGG+V +KVD+A EKQ+ +D+VF
Sbjct: 1 MKKYCSKIRVIAHTQMKVMKH-REKKAHIMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVF 59
Query: 213 QKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQ 272
+DEMID IGVTKGKG++GV +RW +LPRKTH+GLRK +
Sbjct: 60 AQDEMIDCIGVTKGKGFKGVTSRWHTKKLPRKTHKGLRK-------------------KR 100
Query: 273 NGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCC 332
NG TE+D TEK I PMGGFPHYG+VN+D+++I+GCC
Sbjct: 101 NGG------------------------TEYDITEKSINPMGGFPHYGLVNQDFVMIRGCC 136
Query: 333 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
VG KKR +TLR+SL+ QT R A E+I LK+IDTSSK GHGRFQT EK + G+LK
Sbjct: 137 VGSKKRPITLRKSLIVQTKRFAHEKINLKWIDTSSKLGHGRFQTHAEKRAFMGKLK 192
>gi|355749943|gb|EHH54281.1| hypothetical protein EGM_15087 [Macaca fascicularis]
Length = 201
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 156/198 (78%), Gaps = 2/198 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M+HRKF PRHGSL FL +K +S+H GKVK+FPKDDPSK LTAFLGYKAGMT IV++V
Sbjct: 1 MAHRKFSAPRHGSLSFLTQKHSSKHHGKVKSFPKDDPSKLVHLTAFLGYKAGMTKIVQEV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VV+G+VGYV+TP GL++ V A+H+++ +R FYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVMGIVGYVQTPPGLQTFKIVLAEHISDASKRHFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KS +KAFTKY KK + +DGKK ++ MKKY VIR +A+TQ+ + L Q KAH
Sbjct: 121 NWHKS-EKAFTKYCKKCQDEDGKKHLEKDFGSMKKYRQVIRGIAYTQMCLLP-LCQNKAH 178
Query: 181 LMEIQVNGGSVAQKVDFA 198
LMEIQV G++A+K+D+A
Sbjct: 179 LMEIQVKVGTMARKLDWA 196
>gi|326437340|gb|EGD82910.1| ribosomal protein L3 isoform a [Salpingoeca sp. ATCC 50818]
Length = 235
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLP+KR HRG+V++FP+D+ LTAF+GYKAGMTHIVR++
Sbjct: 1 MSHRKFRAPRHGSLGFLPKKRTKHHRGRVRSFPRDNKEDKPHLTAFIGYKAGMTHIVREM 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ GSK HKKE EAVT++ETPP+V VG+VGYV+TPRGLR L TV+A +++E RRFYK
Sbjct: 61 DRTGSKAHKKEVVEAVTVVETPPMVGVGIVGYVETPRGLRQLTTVFAGNMSETCMRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ KSKKK F+KY + +T++GKK+ + QL ++ KYCTVIRV+AHT+I + L+QK+AH
Sbjct: 121 NYVKSKKKQFSKYFARLKTEEGKKNFEDQLRRLAKYCTVIRVIAHTKIDVL-NLRQKRAH 179
Query: 181 LMEIQVNGGSVAQKVD 196
+MEIQVNGG+ + D
Sbjct: 180 IMEIQVNGGTPRGETD 195
>gi|296109263|ref|YP_003616212.1| 50S ribosomal protein L3 [methanocaldococcus infernus ME]
gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
Length = 333
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 209/367 (56%), Gaps = 41/367 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K+ PR GSLGF PRKRA R +++++P +D RL AF YKAGMTH + +
Sbjct: 2 KYHTPRRGSLGFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMTHGLIKEDNQK 58
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWC 123
S +E +T++E PP+ V G+ Y + R L +L +WA +L++E+ R+
Sbjct: 59 SPRAGQEVFTPMTVLEAPPINVFGIRVYGRNERNYLTTLTEIWADNLDKELSRKI----- 113
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLME 183
K KK E +K ++ L+++K +RVL HT K+ L +KK ++E
Sbjct: 114 --------KLPKKEE----RKGVEY-LDEIKDKIEDVRVLVHTN-PKLTCLPKKKPEILE 159
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
I++ G + +++++A KQ+ I VFQ+ E++D IGVTKGKG++GVV RWGV PR
Sbjct: 160 IRIGGKDLEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPR 219
Query: 244 KTHR-GL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R G+ R V IG W P + +TV R GQ GYH RTE NK+I K+G +E
Sbjct: 220 KHRRQGVGRHVGSIGPWQPKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEE------- 272
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
ITP GGFPHYGV+ +Y+++KG GP+KR++ LR ++ + + + EI
Sbjct: 273 -------ITPEGGFPHYGVIKNNYVILKGSVQGPQKRLIVLRSAIRPEEPLIKVPEI--T 323
Query: 362 FIDTSSK 368
+I T+ K
Sbjct: 324 YISTTPK 330
>gi|389853117|ref|YP_006355351.1| 50S ribosomal protein L3 [Pyrococcus sp. ST04]
gi|388250423|gb|AFK23276.1| rplC, large subunit ribosomal protein L3 [Pyrococcus sp. ST04]
Length = 361
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 206/377 (54%), Gaps = 32/377 (8%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---------NEEVR 115
+ KE VTIIETPPL V G+ Y + GL + V N++V
Sbjct: 60 LT-NGKEIFVPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFKLDNYPVKPNKKVE 118
Query: 116 RRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQ--IRKM 171
FYK ++ K Y + ++ + QLE M K ++ R L TQ I K+
Sbjct: 119 MTFYKLL----RRRIATLPKDYTQEQFEQKL-GQLEDMIKEGEIVEVRALVSTQPWIIKL 173
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
K KK +ME + G SV +K ++ K++ +D V ++ E++D+I VTKGKG +G
Sbjct: 174 K----KKPEVMEYAIGGTSVEEKFNYIKERLGKELRVDEVLKEGELLDVIAVTKGKGTQG 229
Query: 232 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G
Sbjct: 230 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIG-- 287
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
H+ E + E +ITP GGFPHYG+V D+++I G GP KR++ +R ++
Sbjct: 288 ----HNGKLELNGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGPVKRIIRVRPAIRPPKK 343
Query: 352 RLALEEIKLKFIDTSSK 368
+ ++ ++ ++ SK
Sbjct: 344 KPPVQRPQITYVSVESK 360
>gi|432111882|gb|ELK34924.1| 60S ribosomal protein L3 [Myotis davidii]
Length = 231
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 159/238 (66%), Gaps = 37/238 (15%)
Query: 157 CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDE 216
C VIRV+AHTQ+R + L QKK HLMEIQ DE
Sbjct: 15 CQVIRVIAHTQMRLLP-LHQKKVHLMEIQ-----------------------------DE 44
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MID+IGVTKGKGY+GV +RW +LP KTHRG +KVACI AWHPA+V+F+VA+AGQ GYH
Sbjct: 45 MIDLIGVTKGKGYKGVTSRWHTKKLPHKTHRGPQKVACIQAWHPAQVAFSVAQAGQKGYH 104
Query: 277 HRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKG 330
TE+N KIY++G+ + ++A T++ ++K I P+GGF +G V D++++KG
Sbjct: 105 PHTEIN-KIYRIGQGYLIKDSKLIKNNASTDYGLSDKSINPLGGFVCHGEVTNDFVMLKG 163
Query: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
C VG KKR++TLR+SLL QT R ALE+ LKF+DT+SKFGHGRFQ +EK + G LK
Sbjct: 164 CVVGTKKRMLTLRKSLLMQTKRWALEKTDLKFMDTTSKFGHGRFQIVEEKKAFMGPLK 221
>gi|312137075|ref|YP_004004412.1| 50S ribosomal protein L3 [Methanothermus fervidus DSM 2088]
gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
Length = 333
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 182/344 (52%), Gaps = 34/344 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRASR ++K++P+ K L A GYK GMTH++ K
Sbjct: 3 KHHRPRRGSLAFSPRKRASRETPRIKSWPE---IKDTCLLAAAGYKVGMTHVMAIDNKKN 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E VTIIETPPL V+G+ Y +T RGL++L V A L E++ RR
Sbjct: 60 SPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLADDLKEDLERRINLPKNY 119
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K KA K +E+ K Y +RVL HT R + G+ +KK + E
Sbjct: 120 DKDKALDK-----------------IEENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFEC 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
+ G +K+++A K + I +F + E +D I VTKGKG++G V RWG+ K
Sbjct: 163 GLGGKDPQEKLEYALELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAK 222
Query: 245 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
T R R + +G W P+R + V +AGQ GYH RTE NK I K+G +
Sbjct: 223 TARSGKGRHIGSLGPWTPSRTMWRVPQAGQTGYHRRTEYNKMIMKIGTS----------- 271
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
D EK I P GGF YG+V DYLL+KG GP KR++ LR+++
Sbjct: 272 DEVEK-INPKGGFIRYGLVRNDYLLVKGSVPGPTKRLIMLRKAI 314
>gi|408381922|ref|ZP_11179469.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
gi|407815370|gb|EKF85955.1| 50S ribosomal protein L3P [Methanobacterium formicicum DSM 3637]
Length = 336
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 194/366 (53%), Gaps = 39/366 (10%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GS+ F PRKRA+R + ++P +++P L F GYK GMTH+ + S
Sbjct: 6 QPRKGSVAFSPRKRAARESPTISSWPEREEPG----LLGFPGYKVGMTHVTQLDNTKNSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
E VT++ETPP+VV+G+ Y +T RGL+++ V A +E+++R+
Sbjct: 62 TEGMEISTPVTVVETPPIVVMGIRAYTRTSRGLKAMTDVLASEFDEDLKRKI-------- 113
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
+Y+++ ++ L+K+ + IR L HT+ R M + +KK LME +
Sbjct: 114 -----SVPAEYDSEAQLASLKENLDKVVE----IRALIHTKPR-MASVPKKKPELMECGI 163
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G SV K+D+A G K+I VF E D I VTKGKG++GV+ RWGV K
Sbjct: 164 GGNSVEDKLDYAAGVLGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYGKAA 223
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R V IG W PAR +TV AGQ GYH RTE NKKI K+G+A Q
Sbjct: 224 RSSKARVVGSIGPWTPARTMWTVPMAGQMGYHQRTEFNKKILKIGEAEQAD--------- 274
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
++ P GGF YG+V +YLL+KG GP KR+V LR++ +I +I
Sbjct: 275 ---EVNPKGGFVKYGLVKNNYLLLKGSLPGPSKRLVMLRKASRPHGKHDDAPQI--SYIS 329
Query: 365 TSSKFG 370
T+SK G
Sbjct: 330 TASKQG 335
>gi|288560108|ref|YP_003423594.1| 50S ribosomal protein L3 [Methanobrevibacter ruminantium M1]
gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
Length = 336
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 198/366 (54%), Gaps = 39/366 (10%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 66
PR GS+ F PRKR ++ ++KA+P ++ K L GYKAGMTH +V D +K S
Sbjct: 6 QPRKGSVAFSPRKRVAKETPRIKAWPSNEEPK---LLGLAGYKAGMTHAMVVDNDK-NSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
H E VT++E PPLV++G+ Y KT GL+++ V A +L+EE+ R+
Sbjct: 62 SHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITEVIADNLDEELSRKI-------- 113
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
K Y+ + IQ LEK ++ +RVL HT KM + +KK + E +
Sbjct: 114 -----TLPKDYDQSEAIAKIQDALEKTEE----VRVLVHTN-PKMASVPKKKPEIFECAL 163
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G S +K+++A G ++I +F + + +D I TKGKG +GVV RW + K
Sbjct: 164 GGSSAEEKLNYALGILGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRIQYGKAM 223
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R V IG W P R +TVA+AGQ GYH RTE NKK+ K+G S E D
Sbjct: 224 RSGKGRHVGSIGPWSPERTMWTVAQAGQMGYHKRTEFNKKVIKIGDVS--------EVDA 275
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
+ P GGF YG+V DY+L+KG GP KR+V LRQ++ + + A ++ +I
Sbjct: 276 ----VNPAGGFIRYGLVKNDYVLVKGSVPGPTKRLVILRQAIRPKKADDAAPQV--NYIS 329
Query: 365 TSSKFG 370
T+SK G
Sbjct: 330 TASKQG 335
>gi|294866225|ref|XP_002764639.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239864270|gb|EEQ97356.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 182
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 134/181 (74%), Gaps = 9/181 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR H+GKVK+FPKDD SKPC LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKSFPKDDQSKPCHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KPGSKLH+KE EAVT++E PP+V VG VGYV+TP GLR+L TVWA+HL++EVRRRFYK
Sbjct: 61 DKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALTTVWAKHLSDEVRRRFYK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW SK KK ++ + + ++ V+R + HTQ+ K+K L QK
Sbjct: 121 NWYHSK--------KKLSASTKRRTMTLRSSGVRSTARVVRAIMHTQVSKVK-LTQKTPT 171
Query: 181 L 181
L
Sbjct: 172 L 172
>gi|337283644|ref|YP_004623118.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
gi|334899578|gb|AEH23846.1| 50S ribosomal protein L3P [Pyrococcus yayanosii CH1]
Length = 359
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 205/371 (55%), Gaps = 22/371 (5%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLGFTPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---NEEVRRRFYKN 121
+ KE VTI+ETPPL V GV Y + GL + V N ++ K
Sbjct: 60 LT-NGKEIFMPVTIVETPPLRVFGVRAYRQGYLGLETATEVIVPDFTLDNYVTKKGKQKT 118
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQ--IRKMKGLKQK 177
+ + ++ K Y DD ++ + +LE + K ++ R L TQ I K+K K
Sbjct: 119 FYELLRRRIATLPKNYTEDDFQQKL-GELEDLIKEGEIVEVRALVSTQPWIIKLK----K 173
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
K +ME + G SV +K ++ K++ + V ++ E++D+I VTKGKG +GV+ RWG
Sbjct: 174 KPEVMEYAIGGTSVEEKFNYIKERLGKELRVKDVLKEGELLDVIAVTKGKGTQGVIKRWG 233
Query: 238 VTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
V K +G RKVA IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ +
Sbjct: 234 VKLRAHKDSKGRRKVASIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK---- 289
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++
Sbjct: 290 --LVLDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQR 347
Query: 358 IKLKFIDTSSK 368
++ ++ SK
Sbjct: 348 PQITYVSVESK 358
>gi|333911089|ref|YP_004484822.1| 50S ribosomal protein L3 [Methanotorris igneus Kol 5]
gi|333751678|gb|AEF96757.1| ribosomal protein L3 [Methanotorris igneus Kol 5]
Length = 335
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 197/369 (53%), Gaps = 39/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R +++++P +D RL AF YKAGM+H + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPRIRSWPDEDK---VRLQAFPVYKAGMSHALVKENNPN 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +E +TI+E P + V + Y K RGL++L VWA L++E+ R+
Sbjct: 61 SPNANQEVFTPITILEAPDINVFAIRVYGKDTRGLKTLTEVWADELDKELARKI------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K K ++ D +L+ + +RVL HT K+ L +KK ++EI
Sbjct: 115 ---KTLPKKEERKTVD--------ELDNLIDKIADVRVLVHTN-PKLTCLPKKKPEVLEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G + +++++A K++ I VF + E +D I +TKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIQERLNYAKEILGKKVSITDVFSEGEFVDTIAITKGKGFQGQVKRWGVKIQFGK 222
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R V IG W P RV +TV GQ GYH RTE NK+I K+G +E
Sbjct: 223 HQRKGVGRHVGSIGPWTPKRVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ +Y+++KG GP KR+V LR ++ R L EI +
Sbjct: 275 ------ITPKGGFLHYGVIRNNYVVVKGSVPGPAKRLVVLRSAIRPVEDRFGLPEI--TY 326
Query: 363 IDTSSKFGH 371
I T+SK G+
Sbjct: 327 ISTTSKQGN 335
>gi|256810689|ref|YP_003128058.1| 50S ribosomal protein L3P [Methanocaldococcus fervens AG86]
gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
Length = 335
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 202/368 (54%), Gaps = 41/368 (11%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
PR GSL F PRKRA R +++++P++D RL AF YKAGMTH + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDN---VRLQAFPVYKAGMTHAFIKEDNPKS 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
+E VT++E PP+ V + Y + R L +L VWA +L++E+ R+
Sbjct: 62 PNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI------ 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K KK E +K ++ LE +K +RVL HT K+ L +KK ++EI
Sbjct: 116 -------KLPKKEE----RKTVE-DLEAIKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G + +++++A KQ+ I VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R V IG W P V +TV GQ GYH RTE NK+I K+G +E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ +Y+++KG GP KR++ LR ++ Q + + EI +
Sbjct: 275 ------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRSAIRPQEPLVKVPEI--TY 326
Query: 363 IDTSSKFG 370
I T+SK G
Sbjct: 327 ISTTSKQG 334
>gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus]
Length = 180
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/170 (63%), Positives = 135/170 (79%), Gaps = 6/170 (3%)
Query: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKK 284
KGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPARV+F+VARAGQ GYH+RTE+NKK
Sbjct: 1 KGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHYRTEINKK 60
Query: 285 IYKL--GKASQES----HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
IYK+ G ++ ++A T++D ++K I P+GGF HYG V D++++KGC VG KKR
Sbjct: 61 IYKICQGHLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGAKKR 120
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
V+TL +SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 121 VLTLCKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGSLK 170
>gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster]
Length = 208
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 133/166 (80%), Gaps = 1/166 (0%)
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLME 183
KSKKKAFTK +KK+ D GKK I+ KM +YC VIRV+AH+QIR +K +QKKAH+ME
Sbjct: 24 KSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQ-RQKKAHVME 82
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
IQ+NGGS+ KV +A EK I + VF +DEMID +GVTKGKG++GV +RW +LPR
Sbjct: 83 IQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPR 142
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
KTH+GLRKVACIGAWHP+RVS TVARAGQ GYHHRTE+NKKIY++G
Sbjct: 143 KTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 188
>gi|432328989|ref|YP_007247133.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
gi|432135698|gb|AGB04967.1| archaeal ribosomal protein L3 [Aciduliprofundum sp. MAR08-339]
Length = 340
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 194/363 (53%), Gaps = 29/363 (7%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
HPR GS+ + PRKRA+ +++ +P D R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPVPRIRTWP--DIEDGPRIQGFAGYKAGMTHVFTVDWRKHTTT 63
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
+E VT+IE PP+ V GV Y +T GLRS+ VW ++L+ E+ RRF
Sbjct: 64 AGQEIWTPVTVIEVPPMKVAGVRFYERTIYGLRSIGEVWDENLDRELSRRF--------- 114
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
K+Y + I+ +E IR++ HTQ R + G+ +K +MEI+V
Sbjct: 115 ----PLPKEYSEEVALSRIKGDIED-------IRLIVHTQPRLVSGIPKKAPDIMEIRVG 163
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
GG+V ++ D+A K+I + + +D++ +TKGKG++G V R+GV L +K +
Sbjct: 164 GGTVEERKDYALNLLGKEIKFSDFKSEGKFVDVVAITKGKGFQGHVKRFGVKLLHQKNRK 223
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEK 307
R + +G WHP V +TV +AGQ GYH RTE NK+I K +E+ +
Sbjct: 224 HRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIIKYVDFVEENGER-----KLAM 278
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
DITP GGFPHYG V Y+LI G GP KR++ R + + +E I++ ++ S
Sbjct: 279 DITPEGGFPHYGEVRNPYVLIHGSVPGPAKRLIRFRDPVRQVLE--DVESIEITYVSLQS 336
Query: 368 KFG 370
K G
Sbjct: 337 KQG 339
>gi|409096184|ref|ZP_11216208.1| 50S ribosomal protein L3P [Thermococcus zilligii AN1]
Length = 346
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 195/367 (53%), Gaps = 35/367 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K++ +P+D R+ F GYKAGMTHI+ + PG
Sbjct: 7 PRRGSLAYSPRKRARSIVPKIRNWPEDSE---VRMLGFAGYKAGMTHILMIDDNPGLT-K 62
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KE VTI+E PPL V G+ Y + GL + VW LN+ VRRR
Sbjct: 63 GKEIFAPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHKLNDHVRRRI---------- 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTV-----IRVLAHTQIRKMKGLKQKKAHLME 183
K D ++ QA+L +++ +R+L HTQ + GLK KK +ME
Sbjct: 113 ------KTLPKDYSEEAFQARLGQLEDLVNEGEVVDVRLLVHTQ-PWLIGLK-KKPEVME 164
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
+ G +A K ++A ++I V + E++D++ VTKGKG +G V RWGV
Sbjct: 165 YAIGGNDIAAKFEYAKERIGREIRASEVLHEGELLDVVAVTKGKGTQGPVKRWGVKIQFH 224
Query: 244 KTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R V +G WHPARV +TV +AGQ G+HHRTE+NK++ +G+ +
Sbjct: 225 KAQRAGKGRHVGNLGPWHPARVMWTVPQAGQTGFHHRTELNKRLIAIGE------NGKLN 278
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
D E +ITP GGFPHYG+V D+L+I+G G KR++ +R ++ + +E ++
Sbjct: 279 LDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPAKKPPVERPQIT 338
Query: 362 FIDTSSK 368
+I SK
Sbjct: 339 YISRESK 345
>gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 202
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 133/190 (70%), Gaps = 22/190 (11%)
Query: 220 IIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRT 279
I VTKGKG++GV +RW +LPRKTH+GLRKVACIGAWHPARV+ +VARAGQ GY HRT
Sbjct: 2 FIDVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVARSVARAGQKGYFHRT 61
Query: 280 EMNKKIYKLGKASQES----------------------HSAMTEFDRTEKDITPMGGFPH 317
E+NKKIY++G Q +A TEFD T K+ITP+GGFPH
Sbjct: 62 ELNKKIYRIGMGLQAQLEVAKAEAAKDDRDKNVLPKPKGNASTEFDLTAKNITPIGGFPH 121
Query: 318 YGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTT 377
YG V DY++IKGCC+GP+KRV+TLR++L+ Q + E+I LKFIDTSSKFGHGRFQT
Sbjct: 122 YGEVRNDYVMIKGCCMGPRKRVITLRKTLIPQIKPRSKEKIVLKFIDTSSKFGHGRFQTR 181
Query: 378 QEKAKYYGRL 387
EK G L
Sbjct: 182 AEKQAIMGPL 191
>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
Length = 329
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/367 (36%), Positives = 198/367 (53%), Gaps = 44/367 (11%)
Query: 7 EH-PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
EH PR GSLGF PRKRAS +++A+P+ RL F GYK GMTH+V ++ S
Sbjct: 3 EHRPRRGSLGFSPRKRASSIVPRIRAWPE---CSETRLLGFAGYKVGMTHVVMVDDRKNS 59
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
+ +E VT+IETPP+ V G+ Y KTP G++ VW+ L+ + RR
Sbjct: 60 LTYGEEIVVPVTVIETPPMKVAGIRVYRKTPYGMQIAGEVWSSDLDNFLGRRL------Q 113
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
K K E DD + +RV+ +TQ + G+ +K +ME +
Sbjct: 114 LPKKSPDVEKLKEIDDAAE---------------VRVITYTQPYLITGIPKKVPDVMEHK 158
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
V GG V+ +D+A K+I + V+ + +ID++ +TKGKG++G V RWGV L K
Sbjct: 159 V-GGDVSSALDYAIEKLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKH 217
Query: 246 HRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R+V C+G W+P + +TV +AGQ G+H RTE NK+I K+G+ E
Sbjct: 218 ARSSKHRRVGCLGPWNPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSE--------- 268
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
+TP GGFPHYGVV DY+LI G G KR++ +R ++ + + + I L ++
Sbjct: 269 -----VTPNGGFPHYGVVRSDYVLISGSVPGSVKRLIRMRDAI--RPPQAEFDGINLIYV 321
Query: 364 DTSSKFG 370
T+SK G
Sbjct: 322 STTSKQG 328
>gi|341582063|ref|YP_004762555.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
gi|340809721|gb|AEK72878.1| 50S ribosomal protein L3P [Thermococcus sp. 4557]
Length = 347
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 197/368 (53%), Gaps = 28/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA ++K +PKD R+ F GYKAGMTH++ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRARSIVPRIKKWPKDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VTI+E PPL V G+ Y + GL + VW LN+ V+RR
Sbjct: 60 LT-KGKEIFMPVTIVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDHVKRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQIRKMKGLKQKKAHLM 182
K Y+ + K + AQLE++ + ++ R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYDEEAFKAKL-AQLEELIESGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E + G V K D+A K++ V + E++DII VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDIIAVTKGKGTQGPVKRWGVKIQF 223
Query: 243 RKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R + +G WHP RV +TV AGQ G+HHRTE NK++ +G+ + +
Sbjct: 224 HKAQRAGKARHIGNLGPWHPTRVMWTVPLAGQMGFHHRTEFNKRLIAIGE-----NGVLK 278
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D+ E +ITP GGFPHYGV+ D+L+I+G G KR++ +R ++ R +E ++
Sbjct: 279 LGDKKEIEITPKGGFPHYGVIRSDFLMIQGTVPGAFKRIIRVRPAIRAPKKRPPVERPQI 338
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 339 TYVSRESK 346
>gi|339247731|ref|XP_003375499.1| putative ribosomal protein L3 [Trichinella spiralis]
gi|316971139|gb|EFV54965.1| putative ribosomal protein L3 [Trichinella spiralis]
Length = 180
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 139/169 (82%), Gaps = 7/169 (4%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+SHRKF PRHG +GFLP+KR+ RHRGKVK+FPKDDP KP LTAF+GYKAGMTHIVR+V
Sbjct: 17 VSHRKFSAPRHGHVGFLPKKRSKRHRGKVKSFPKDDPQKPVHLTAFIGYKAGMTHIVREV 76
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVG--VVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
+KPGSK++KK+ EAVT++ETPP+V+VG VVGY++TP+GLR+ T+WA+HL+++ +RR+
Sbjct: 77 DKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRAFKTIWAEHLSDDCKRRY 136
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQ 167
K ++KAFTK +KK++ + G K+IQ +M KYC VIRV+AHTQ
Sbjct: 137 -----KCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHTQ 180
>gi|289597193|ref|YP_003483889.1| 50S ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 198/365 (54%), Gaps = 33/365 (9%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
HPR GS+ + PRKRA+ +++ +P+ D P R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
+E VT+IE PP+ V GV Y +T GL+S+ VW ++L++E+ RRF
Sbjct: 62 TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRF------- 114
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
K+Y D LE++K IR++ HTQ R + G+ +K +MEI+
Sbjct: 115 ------PLPKEYSKDKA-------LERIKGDIEDIRLIVHTQPRLVSGVPKKAPDIMEIR 161
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
V GG++ + ++A K+I + +D+I +TKGKG++G V R+GV L +K
Sbjct: 162 VGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKN 221
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
+ R + +G WHP V +TV +AGQ GYH RTE NK+I K +E+ R
Sbjct: 222 RKHRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEK-----RL 276
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
DITP GGFPHYG V Y+LI G GP KR++ R ++QT +E I++ ++
Sbjct: 277 AIDITPKGGFPHYGEVKNAYVLIHGSVPGPAKRLIRFRDP-VRQTLE-DVEGIEITYVSL 334
Query: 366 SSKFG 370
SK G
Sbjct: 335 ESKQG 339
>gi|432102535|gb|ELK30106.1| 60S ribosomal protein L3-like protein [Myotis davidii]
Length = 227
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 145/217 (66%), Gaps = 38/217 (17%)
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
K+ +QKKAH+MEIQ+NGG+VA+KV +A EKQ+P+ +VF + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGI 61
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 290 KASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
+ + ++A T +D T+K ITP+
Sbjct: 122 RGFHKEDGKVVKNNASTSYDLTDKSITPL------------------------------- 150
Query: 344 QSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEK 380
SLL SR ALE I+LKFIDT+SKFGHGRFQT QEK
Sbjct: 151 -SLLVHHSRRALENIELKFIDTTSKFGHGRFQTAQEK 186
>gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3]
gi|259709743|sp|C5A286.1|RL3_THEGJ RecName: Full=50S ribosomal protein L3P
gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3]
Length = 346
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 193/368 (52%), Gaps = 29/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA ++K +PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VTI+E PPL V G+ Y + GL + VW LN+ V+RR
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQIRKMKGLKQKKAHLM 182
K Y +D K + QLE + ++ R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYGEEDFKAKL-GQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E + G V K ++A K+I V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQF 223
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ +
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------L 277
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ E DITP GGFPHYG++ D+L+I+G G KR++ +R ++ + +E ++
Sbjct: 278 VLNGNEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKRIIRVRPAIKPPKKKPPVERPQI 337
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 338 TYVSRESK 345
>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
gi|1710558|sp|P54014.1|RL3_METJA RecName: Full=50S ribosomal protein L3P
gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
2661]
Length = 335
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 200/368 (54%), Gaps = 41/368 (11%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
PR GSL F PRKRA R +++++P++D RL AF YKAGM+H + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPKS 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
+E +TI+E PP+ V + Y + R L +L VWA +L++E+ R+
Sbjct: 62 PNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI------ 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K + +K ++ LE +K +RVL HT K+ L +KK ++EI
Sbjct: 116 -----------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G + +++++A KQ+ I VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R V IG W P V ++V GQ GYH RTE NK+I K+G E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ +Y+++KG GP KR++ LR+++ Q + + EI +
Sbjct: 275 ------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TY 326
Query: 363 IDTSSKFG 370
I T+SK G
Sbjct: 327 ISTTSKQG 334
>gi|410722182|ref|ZP_11361491.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
MBC34]
gi|410597418|gb|EKQ52037.1| archaeal ribosomal protein L3 [Methanobacterium sp. Maddingley
MBC34]
Length = 336
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 194/369 (52%), Gaps = 45/369 (12%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFP-KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GS+ F PRKRA+R ++ ++P +++P L F GYK GMTH+ + S
Sbjct: 6 QPRKGSVAFSPRKRAARESPRISSWPEREEPG----LLGFPGYKVGMTHVTQMDNTKNSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
E VT++ETPP+VV+G+ Y +T RG++++ V A ++E+++R+
Sbjct: 62 TEGMEISTPVTVVETPPIVVMGIRAYTQTSRGIKAMTDVLAAEMDEDLKRKI-------- 113
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKK---YCTVIRVLAHTQIRKMKGLKQKKAHLME 183
+Y D +AQL +K+ IR L HT+ R M + +KK L+E
Sbjct: 114 -SIPVEY-----------DSEAQLASLKEKMDQVVEIRALIHTKPR-MASVPKKKPELLE 160
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
+ G SV K+++A K+I VF E D I VTKGKG++GV+ RWGV
Sbjct: 161 CGIGGNSVEDKLEYAASVLGKEINPADVFADGEHTDAIAVTKGKGFQGVIKRWGVRIQYG 220
Query: 244 KTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R V IG W PAR +TV AGQ GYH RTE NKKI K+G+A Q
Sbjct: 221 KAARSSKGRHVGSIGPWSPARTMWTVPMAGQMGYHQRTEYNKKILKIGEAEQAD------ 274
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
++ P GGF YG+V +YLL+KG GP KR+V LR+++ +I
Sbjct: 275 ------EVNPKGGFVKYGIVKNNYLLLKGSLPGPSKRLVMLRKAMRPHGKHDDAPQI--S 326
Query: 362 FIDTSSKFG 370
+I T+SK G
Sbjct: 327 YISTASKQG 335
>gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
Length = 346
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 199/368 (54%), Gaps = 29/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA +++ +P+++ RL F GYKAGMTHI+ ++PG
Sbjct: 3 KISKPRRGSLAYSPRKRAKSIVPRIRKWPQEEE---VRLLGFAGYKAGMTHILMIDDRPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VTI+ETPP+VV G+ Y + GL + VW +LN +++RR
Sbjct: 60 LT-KGKEIFMPVTIVETPPMVVFGIRAYKQGYLGLETATEVWIPNLNPDLKRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQIRKMKGLKQKKAHLM 182
K Y+ ++ + +LE + K ++ R L HTQ R +K +KK +M
Sbjct: 113 ------KTLPKNYDEGAFQQKL-GELEDLVKSGEIVEVRALVHTQPRLIK--LKKKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E V G SV K + K+I V ++ E++D+I VTKGKG +G V RWG+
Sbjct: 164 EYAVGGKSVEDKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWGIKIQF 223
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ +
Sbjct: 224 HKAQRAGKGRHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE------NGFL 277
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E + + +ITP GGFPHYG+V D+L+I G G KR+V +R ++ + +E ++
Sbjct: 278 ELNGNKIEITPKGGFPHYGIVRSDFLMIAGSVPGAIKRIVRVRPAIRPPAKKPPVERPQI 337
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 338 TYVSRESK 345
>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
Length = 362
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 200/377 (53%), Gaps = 31/377 (8%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
+ KE VTIIETPPL + GV Y + GL + V + N+
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRIFGVRAYRQGYLGLETATEVIVPDFELD-------NYVP 111
Query: 125 SKK---KAFTKY----------TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
SKK + FT Y K Y +D ++ + LE M K ++ V A +
Sbjct: 112 SKKGRGRKFTFYQFLGRRIATLPKDYTQEDFEQKL-GTLEDMIKEGEIVEVRALVSTQPW 170
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
+KK +ME + G SV +K ++ K+I + V ++ E++D+I VTKGKG +G
Sbjct: 171 VIKLKKKPEVMEYAIGGTSVEEKFNYIKERLGKEIRVGEVLKEGELLDVIAVTKGKGTQG 230
Query: 232 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+
Sbjct: 231 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGEN 290
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
+ D E +ITP GGFPHYG+V D+++I G GP KR++ +R ++
Sbjct: 291 GK------LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGPVKRIIRVRPAIRPPKK 344
Query: 352 RLALEEIKLKFIDTSSK 368
+ ++ ++ ++ SK
Sbjct: 345 KPPVQRPQITYVSVESK 361
>gi|432102534|gb|ELK30105.1| 60S ribosomal protein L3-like protein [Myotis davidii]
Length = 271
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 135/167 (80%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHG LGFLP KR+ RHRGKVK +P+DDPS+P LTAFLGYKAGMTH +R+V
Sbjct: 45 SHRKFSAPRHGHLGFLPHKRSRRHRGKVKTWPRDDPSRPVHLTAFLGYKAGMTHTLREVH 104
Query: 62 KPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKN 121
+PG K+ K+E EAVTI+ETPPLVVVGVVGYV TPRGLRS T++A+HL++E RRRFYK+
Sbjct: 105 RPGLKISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKD 164
Query: 122 WCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI 168
W KSKKKAFTK K++ DGKK +Q MKKYC VIRV+ HTQ+
Sbjct: 165 WHKSKKKAFTKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQV 211
>gi|223477993|ref|YP_002582389.1| 50S ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
gi|214033219|gb|EEB74047.1| LSU ribosomal protein L3e (L3p) [Thermococcus sp. AM4]
Length = 346
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 193/368 (52%), Gaps = 29/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA ++K +PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KVHRPRRGSLAFSPRKRARSVVPRIKKWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VTI+E PPL V G+ Y + GL + VW LN+ V+RR
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHELNDNVKRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQIRKMKGLKQKKAHLM 182
K Y +D K + QLE + ++ R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYGEEDFKAKL-GQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E + G V K D+A K++ V + E++D+I VTKGKG +G V RWG+
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIKVQF 223
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ +
Sbjct: 224 HKAQRAGKGRHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGE------NGKL 277
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
+ E +ITP GGFPHYGV+ D+L+I+G G KR++ +R ++ + +E ++
Sbjct: 278 ILNGNEIEITPKGGFPHYGVIRSDFLMIEGSVPGAFKRIIRVRPAIRPPKKKPPVERPQI 337
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 338 TYVSRESK 345
>gi|336121494|ref|YP_004576269.1| 50S ribosomal protein L3 [Methanothermococcus okinawensis IH1]
gi|334856015|gb|AEH06491.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
Length = 333
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 134/372 (36%), Positives = 196/372 (52%), Gaps = 47/372 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R K++++P D+ RL AF YKAG TH + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPKIRSWPNDEK---VRLQAFPVYKAGTTHALVKENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +++ VT++E P + V G+ Y KT +GL++L VWA++L++E+ R+
Sbjct: 61 SPNAEQDVFTPVTVLEAPDITVAGIRVYEKTTKGLKTLTEVWAENLDKELNRKITT---- 116
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI---RVLAHTQIRKMKGLKQKKAHL 181
K+ +A +EK+ + I R + HT K L +KK +
Sbjct: 117 ------------------PKEPKANIEKLDEVADKIAEVRAIVHTN-PKNTNLPKKKPEI 157
Query: 182 MEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TR 240
+EI++ G ++++K+ +A K + I+ VF E ID I +TKGKG++G V RWG+ +
Sbjct: 158 IEIRIGGNNISEKLAYAKEILGKTLSINDVFTDGEFIDTIAITKGKGFQGPVKRWGIKIQ 217
Query: 241 LPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ ++G+ R IG W P RV +TV AGQ GYH RTE NK+I K+G +E
Sbjct: 218 FGKHRNKGVGRHTGSIGPWTPKRVMWTVPMAGQMGYHQRTEYNKRILKIGNNGEE----- 272
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
I P GGF HYG V +Y+L+KG GP KR+V LR ++ R L EI
Sbjct: 273 ---------IVPKGGFLHYGDVKNNYVLVKGSVQGPAKRMVVLRGAIRCPEDRFGLPEI- 322
Query: 360 LKFIDTSSKFGH 371
+I SK G+
Sbjct: 323 -TYISKESKQGN 333
>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
gi|166233157|sp|A6VHD2.1|RL3_METM7 RecName: Full=50S ribosomal protein L3P
gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
Length = 334
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 196/369 (53%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L+ ++ R+
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDNDLGRKL------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K +K D + A LEK T +RV+ HT K G+ +KK ++EI
Sbjct: 115 ----TLVKKEEKKTADA----LDAVLEK----ATEVRVIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AY 325
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 326 ISTESKQGN 334
>gi|209732596|gb|ACI67167.1| 60S ribosomal protein L3 [Salmo salar]
Length = 251
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%), Gaps = 5/171 (2%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGVVGYVETPRGLRSFKTIFAEHISDECKRRFYR 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDI-----QAQLEKMKKYCTVIRVLAHT 166
NW KSKKKAFTKY KK++ D+GKK + + + K T +R H+
Sbjct: 121 NWYKSKKKAFTKYCKKWQDDEGKKQLVKNNAATEYDLSNKSITPLRGFVHS 171
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 74/100 (74%)
Query: 289 GKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK 348
GK ++A TE+D + K ITP+ GF H G V D++++KGC +G KKRV+TLR+SLL
Sbjct: 142 GKKQLVKNNAATEYDLSNKSITPLRGFVHSGEVTNDFVMLKGCTIGVKKRVLTLRKSLLV 201
Query: 349 QTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
Q+SR A E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 202 QSSRRATEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 241
>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
Length = 337
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 195/366 (53%), Gaps = 38/366 (10%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GS+ F PRKRA+R +VK++P+ D+P L A GYKAGMTH++ + S
Sbjct: 6 QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
E VTI+E PPL V+ V Y KT RGL++L V A E++RR+
Sbjct: 62 TEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKTLGEVLATETKEDLRRK--------- 112
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
T + Y+ + + I++ +E Y +RV+ HT R + + +KK + E +
Sbjct: 113 ---LTPPAEDYDQEAAIERIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFECGL 164
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G + +K ++A G K + +F + +D I VTKGKG++G V RWG+ K
Sbjct: 165 GGKTPEEKFEYALGILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAA 224
Query: 247 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R + +G W P+R +TV +AGQ GYH RTE NK+I K+G AS+
Sbjct: 225 RSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEADQ-------- 276
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
+ P GGF YG+V DY+++KG GP KR+V LR+++ + + E ++ +I
Sbjct: 277 ----VNPSGGFVRYGLVRNDYVMVKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYIS 330
Query: 365 TSSKFG 370
T+SK G
Sbjct: 331 TASKQG 336
>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
gi|9910844|sp|Q9UWG2.1|RL3_METVA RecName: Full=50S ribosomal protein L3P
gi|166233160|sp|A6UQJ0.1|RL3_METVS RecName: Full=50S ribosomal protein L3P
gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
Length = 334
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 197/369 (53%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLVENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ ++E+ R+
Sbjct: 61 SPNNGQEVFSPVTVLETPEITVAGIRAYGKTTKGLKALTEVWAKQQDKELGRKLT----- 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
TKK E + + A LEK +RV+ HT K G+ +KK ++EI
Sbjct: 116 --------VTKKEEIKT-VESLDAVLEK----TVDLRVIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
+V G SVA+K+ +A K + I+ VF+ E ID + VTKGKG++G V RWGV + +
Sbjct: 162 RVGGSSVAEKLAYAKDILGKTLSINDVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R+ IG W P RV +TV AGQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRQTGSIGPWRPKRVMWTVPLAGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR ++ + L E+ +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGAVRPAEDKFGLPEV--TY 325
Query: 363 IDTSSKFGH 371
I SK G+
Sbjct: 326 ISKESKQGN 334
>gi|374635578|ref|ZP_09707174.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
gi|373561880|gb|EHP88105.1| ribosomal protein L3 [Methanotorris formicicus Mc-S-70]
Length = 335
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 193/369 (52%), Gaps = 39/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R +++++P++D RL AF YKAGM+H + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPRIRSWPEEDK---VRLQAFPVYKAGMSHALVKENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +E +TI+E P + V G+ Y K RGL++L VWA L+EE+ R+
Sbjct: 61 SPNANQEVFTPITILEAPDINVFGIRVYGKDTRGLKTLTEVWADELDEELARKI------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K +K +L+ + +RVL HT K L +KK ++EI
Sbjct: 115 -----------KTLPKKEEKKTVEELDSLVDKIVDVRVLVHTN-PKNTTLPKKKPEVLEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
++ G + +++++A K++ I VF + E +D I VTKGKG++G V RWGV K
Sbjct: 163 RIGGKDIQERLNYAKEILGKKLSITDVFSEGEFVDAIAVTKGKGFQGQVKRWGVKIQFGK 222
Query: 245 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R R V IG W P R+ +TV GQ GYH RTE NK+I K+G + +E
Sbjct: 223 HQRKSVGRHVGSIGPWTPKRIMWTVPMPGQMGYHQRTEYNKRILKIGNSGEE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGVV +Y+++KG GP KR+V LR ++ L EI +
Sbjct: 275 ------ITPKGGFLHYGVVRNNYVVVKGSVPGPAKRLVVLRSAIRPVEDEFGLPEI--TY 326
Query: 363 IDTSSKFGH 371
I T+SK G+
Sbjct: 327 ISTTSKQGN 335
>gi|284162460|ref|YP_003401083.1| 50S ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
Length = 332
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/370 (35%), Positives = 195/370 (52%), Gaps = 44/370 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K+ PR GSL F PRKRA +++++P D +P +L F GYKAGMTH++ ++
Sbjct: 2 KYSRPRRGSLAFSPRKRAKDVIPRIRSWP-DYEGEP-KLLGFAGYKAGMTHVIMIDDRKN 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT++E PP+ V G+ Y T GL+ VW L+E + RR
Sbjct: 60 SPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMYGLQIAKEVWTTELDEHLSRRL------ 113
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLM 182
KK TD +E +K + +R++ +TQ + G+ K +M
Sbjct: 114 -------PLPKKINTD---------VESLKNVENIAEVRLITYTQPYLITGVPSKTPDVM 157
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E +V G + +D+A K+I + VFQ+ ID+I +TKGKG++G V RWGV L
Sbjct: 158 EYKVGGSDINAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGVITLD 217
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R+V +G W P RV +TV +AGQ G+H RTE NK+I K+G+ +E
Sbjct: 218 AKHARSSKHRRVGTLGPWTPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEE------ 271
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
ITP GGF HYGV+ DY+L+ G GP KR++ +R ++ + R E I +
Sbjct: 272 --------ITPEGGFVHYGVIRSDYVLVSGSVPGPVKRLIRMRDAI--RPPRYTYEGINV 321
Query: 361 KFIDTSSKFG 370
+I T SK G
Sbjct: 322 VYISTKSKQG 331
>gi|289191591|ref|YP_003457532.1| 50S ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
Length = 335
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 200/368 (54%), Gaps = 41/368 (11%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
PR GSL F PRKRA R +++++P+++ RL AF YKAGM+H + P S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPEEET---VRLQAFPVYKAGMSHAFIKEDNPKS 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
+E +TI+E PP+ V + Y + R L +L VWA +L++E+ R+
Sbjct: 62 PNAGQEIFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI------ 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K + +K ++ LE +K +RVL HT K+ L +KK ++EI
Sbjct: 116 -----------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G + +++++A KQ+ I VFQ+ E++D IGVTKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGK 222
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R V IG W P V ++V GQ GYH RTE NK+I K+G E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ +Y+++KG GP KR++ LR+++ Q + + EI +
Sbjct: 275 ------ITPKGGFLHYGVIRNNYVVLKGSVQGPAKRLIVLRRAIRPQEPLIKVPEI--TY 326
Query: 363 IDTSSKFG 370
I T+SK G
Sbjct: 327 ISTTSKQG 334
>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|448294699|ref|ZP_21484778.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|445586376|gb|ELY40658.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
Length = 337
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 197/368 (53%), Gaps = 43/368 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR RA+ + ++P DD +P L F GYKAGM+H+V ++ S L
Sbjct: 7 PRKGSLGFGPRTRATSEVPRFNSWPDDD-GQPA-LQGFAGYKAGMSHVVMVNDEANSPLE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y +T G++ VWA+ ++E+ R
Sbjct: 65 GTEQTVPVTIVETPPMRAVALRAYEQTAYGMQPRGEVWAEEFDDELDRAL---------- 114
Query: 129 AFTKYTKKYETD-DGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
E D + D++ LE+ K +RV+ HT ++G+ +KK +ME +V
Sbjct: 115 -----DLPSEADPSARDDLETALEEGK--VDDLRVITHTSPASLRGVPKKKPDVMETRVG 167
Query: 188 GGSVAQKVDFAYGFFEKQIPIDA--VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GGS+A++ +FA+G ++ +A VF+ E +D+ GVTKGKG +G V RWGV + K
Sbjct: 168 GGSLAERAEFAFGLLDEGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKH 227
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 228 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLALGE------------- 274
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKF 362
E D+ P GG +YG V+ Y LIKG GP KRV+ R ++ RL E +++
Sbjct: 275 --EDDVNPDGGLVNYGEVSGPYTLIKGSLPGPDKRVLRFRPAIRPNDQPRLDPE---VRY 329
Query: 363 IDTSSKFG 370
+ TSS G
Sbjct: 330 VSTSSNQG 337
>gi|340624855|ref|YP_004743308.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
gi|339905123|gb|AEK20565.1| 50S ribosomal protein L3P [Methanococcus maripaludis X1]
Length = 334
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 196/369 (53%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +E VT++ETP + V G+ Y KT +GL++L VWA+ L+ ++ R+
Sbjct: 61 SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKLT----- 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
KK E KK + A L+ + + T +R + HT K G+ +KK ++EI
Sbjct: 116 --------LAKKEE----KKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
+V G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RVGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR S+ + L EI +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEI--AY 325
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 326 ISTESKQGN 334
>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
gi|74553576|sp|Q6LX10.1|RL3_METMP RecName: Full=50S ribosomal protein L3P
gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
Length = 334
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 196/369 (53%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +E VT++ETP + V G+ Y KT +GL++L VWA+ L+ ++ R+
Sbjct: 61 SPNSSQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKLT----- 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
KK E KK + A L+ + + T +R + HT K G+ +KK ++EI
Sbjct: 116 --------LAKKEE----KKTVDA-LDAVLEKATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR S+ + L EI +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEI--AY 325
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 326 ISTESKQGN 334
>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
gi|9910846|sp|Q9V1T5.1|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
gi|380741085|tpe|CCE69719.1| TPA: 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
Length = 361
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 202/370 (54%), Gaps = 18/370 (4%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWA------QHLNEEVRRRF 118
+ KE VTIIETPPL V G+ Y + GL + V +++++ + R
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETATEVIVPDFELDNYVSKKAKGRK 118
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
+ + K++ T K Y DD ++ + LE M K ++ V A + +KK
Sbjct: 119 FTFYQLLKRRIAT-LPKNYTKDDFEQKL-GNLEDMIKEGEIVEVRALVATQPWVIKLKKK 176
Query: 179 AHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
+ME + G SV +K ++ K++ + V ++ E++D+I VTKGKG +G V RWG+
Sbjct: 177 PEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQGPVKRWGI 236
Query: 239 TRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+ +
Sbjct: 237 KLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGENGK----- 291
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
D E +ITP GGFPHYG+V D+++I G G KR++ +R ++ + ++
Sbjct: 292 -LVIDGNEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKKKPPVQRP 350
Query: 359 KLKFIDTSSK 368
++ ++ SK
Sbjct: 351 QITYVSVESK 360
>gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 198/365 (54%), Gaps = 33/365 (9%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
HPR GS+ + PRKRA+ +++ +P+ D P R+ F GYKAGMTH+ + +
Sbjct: 6 HPRRGSMAYYPRKRAASPIPRIRTWPEIEDGP----RIQGFAGYKAGMTHVFTIDWRKHT 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
+E VT+IE PP+ V GV Y +T GL+S+ VW ++L++E+ RRF
Sbjct: 62 TTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGEVWDENLDKELARRF------- 114
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
K+Y D LE++K IR++ HTQ + + G+ +K +MEI+
Sbjct: 115 ------PLPKEYSKDKA-------LERIKGDIEDIRLIVHTQPKLVSGVPKKAPDIMEIR 161
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
V GG++ + ++A K+I + +D+I +TKGKG++G V R+GV L +K
Sbjct: 162 VGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQKN 221
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
+ R + +G WHP V +TV +AGQ GYH RTE NK+I K +E+ +
Sbjct: 222 RKHRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEK-----KL 276
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
DITP GGF HYG V +Y+LI G GP KR+V R ++QT +E I++ ++
Sbjct: 277 AIDITPKGGFLHYGEVKNEYVLIHGSVPGPAKRLVRFRDP-VRQTLE-DVEGIEITYVSL 334
Query: 366 SSKFG 370
SK G
Sbjct: 335 ESKQG 339
>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
gi|226730533|sp|A9A9B8.1|RL3_METM6 RecName: Full=50S ribosomal protein L3P
gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
Length = 334
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 195/369 (52%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKSRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L+ ++ R+
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKL------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K +K D + A LEK T +R + HT K G+ +KK ++EI
Sbjct: 115 ----TLVKKEEKKTADA----LDAVLEK----ATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AY 325
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 326 ISTESKQGN 334
>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
gi|166233156|sp|A4FVY2.1|RL3_METM5 RecName: Full=50S ribosomal protein L3P
gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
Length = 334
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 195/369 (52%), Gaps = 40/369 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + K++++P D K L AF YKAG TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKKLVPKIRSWPAD---KKVGLQAFPVYKAGTTHALLIENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT++ETP + V G+ Y KT +GL++L VWA+ L+ ++ R+
Sbjct: 61 SPNNGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKL------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K +K D + A +EK T +R + HT K G+ +KK ++EI
Sbjct: 115 ----TLAKKEEKKTADA----LDAVVEK----ATEVRAIVHTN-PKTTGIPKKKPEVVEI 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G SVA+++ +A K + I VF+ E+ID + +TKGKG++G V RWG+ + +
Sbjct: 162 RIGGSSVAERLAYAKEILGKTLAIGDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGK 221
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV +TV GQ G+H RTE NK+I KLG E
Sbjct: 222 HQRKGVGRHTGSIGPWRPRRVMWTVPLPGQMGFHQRTEYNKRILKLGSEGAE-------- 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YG V Y+++KG GP KR+V LR S+ + L E+ +
Sbjct: 274 ------ITPKGGFLNYGAVKNGYVVVKGTVQGPAKRLVVLRGSVRAAEDKFGLPEV--AY 325
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 326 ISTESKQGN 334
>gi|261403779|ref|YP_003248003.1| 50S ribosomal protein L3P [Methanocaldococcus vulcanius M7]
gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
Length = 335
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 197/368 (53%), Gaps = 41/368 (11%)
Query: 6 FEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGS 65
PR GSL F PRKRA R +++++P ++ RL AF YKAGM+H + S
Sbjct: 5 INRPRRGSLAFSPRKRAKRPVPRIRSWPDEEA---VRLQAFPVYKAGMSHAFIKEDNQKS 61
Query: 66 KLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCK 124
+E +TI+E PP+ V + Y + R L +L VWA +L++E+ R+
Sbjct: 62 PKAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI------ 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K ++ DD LE +K +RVL HT K+ L +KK ++EI
Sbjct: 116 ----NLPKKEERKTVDD--------LEAIKDKIEDVRVLVHTN-PKLTCLPKKKPEILEI 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G + +++++A KQ+ I VFQ+ E+ D IG+TKGKG++G V RWGV + +
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGK 222
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R V IG W P + +TV GQ GYH RTE NK+I K+G +E
Sbjct: 223 HARKGVGRHVGSIGPWQPKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEE-------- 274
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ +Y+++KG GP KR++ LR+++ + + + EI +
Sbjct: 275 ------ITPKGGFLHYGVIKNNYVVLKGSVQGPAKRLIVLRRAIRPEEPLIKVPEI--TY 326
Query: 363 IDTSSKFG 370
I T+SK G
Sbjct: 327 ISTTSKQG 334
>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
gi|6094075|sp|O59418.1|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
horikoshii OT3]
Length = 362
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 198/377 (52%), Gaps = 31/377 (8%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRKGSLAFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
+ KE VTIIETPPL V G+ Y + GL + V N+
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAGEVIVPDFE-------LDNYTP 111
Query: 125 SKKKAFTKYT-------------KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
SKK K+T K Y ++ ++ + A LE M K ++ V A +
Sbjct: 112 SKKGKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGA-LEDMIKEGEIVEVRALVSTQPW 170
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
+KK +ME + G SV +K ++ K+I + V ++ E++D+I VTKGKG +G
Sbjct: 171 VIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELLDVIAVTKGKGTQG 230
Query: 232 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+
Sbjct: 231 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGEN 290
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
+ D E +ITP GGFPHYG+V D+++I G G KR++ +R ++
Sbjct: 291 GK------LVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKRIIRVRPAIRPPKK 344
Query: 352 RLALEEIKLKFIDTSSK 368
+ ++ ++ ++ SK
Sbjct: 345 KPPVQRPQITYVSVESK 361
>gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1]
gi|226730581|sp|B6YSL3.1|RL3_THEON RecName: Full=50S ribosomal protein L3P
gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1]
Length = 347
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 195/371 (52%), Gaps = 34/371 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA +++ +PKD R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPKDSE---VRMLGFAGYKAGMTHILMIDDRPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VT++E PPL V G+ Y + GL + VW LN+ V+RR
Sbjct: 60 LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVKRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV-----IRVLAHTQIRKMKGLKQKKA 179
K D ++ QA+L +++ +R+L HTQ +K +KK
Sbjct: 113 ----------KTLPKDYNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKP 160
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+ME + G V K D+A K++ V + E++D+I VTKGKG +G V RWG+
Sbjct: 161 EVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGIK 220
Query: 240 RLPRKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
K R R V +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ +
Sbjct: 221 IQFHKAQRAGKGRHVGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGE-----NG 275
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
+ ++ E +ITP GGFPHYG++ D+L+I+G G KR++ +R ++ + +E
Sbjct: 276 KLKLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKRIIRVRPAIRPPKKKPPVER 335
Query: 358 IKLKFIDTSSK 368
++ +I SK
Sbjct: 336 PQITYISRESK 346
>gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1]
gi|73917495|sp|Q5JDJ0.1|RL3_PYRKO RecName: Full=50S ribosomal protein L3P
gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1]
Length = 346
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 193/368 (52%), Gaps = 29/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA +++++PKD R+ F GYKAGMTHI+ + PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRSWPKDSE---VRMLGFAGYKAGMTHILMIDDSPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VTI+E PPL V G+ Y + GL + VW L++ V RR
Sbjct: 60 LT-KGKEIFVPVTIVEVPPLFVYGIRAYKQGYLGLETATEVWFHDLHKNVARRIKTLPKN 118
Query: 125 SKKKAFTKYTKKYE--TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
++AF + E +DG+ +R+L HTQ + GLK KK +M
Sbjct: 119 YNEEAFQAKLGQLEDLVNDGE-------------IADVRLLVHTQ-PWLIGLK-KKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E + G V K D+A K++ V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKRWGVKVQF 223
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R + +G WHPARV +TV +AGQ G+HHRTE NK++ +G+ +
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK------L 277
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D E +ITP GGFPHYG+V D+L+I+G G KR++ +R ++ + +E ++
Sbjct: 278 VLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKRIIRVRPAIRPPKKKPPVERPQI 337
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 338 TYVSRESK 345
>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
Length = 337
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 187/345 (54%), Gaps = 42/345 (12%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
PR GS+ F PRKRA++ KV+++P+ + S C L F GYK GMTH+ S
Sbjct: 6 QPRSGSMAFSPRKRAAKETPKVRSWPETEES--C-LLGFPGYKVGMTHVTMLDNVKNSPT 62
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
E VTI+ETPP+VV+GV Y K RGL++L V A+ L+E++ R+
Sbjct: 63 SGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLNDVMAKDLDEDLTRKI--------- 113
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKAHLMEI 184
K Y D++A+L++MK+ IRVL HT+ R G+ +KK ++E
Sbjct: 114 ----TLPKDY-------DVEAKLDEMKEQLDEVEDIRVLLHTKPRLASGIPKKKPEIIEC 162
Query: 185 QVNGGSVAQKVDFAYGFFEKQI-PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
+ G SV K +FA K++ P D+ F E +D I VTKGKG++G V R+GV
Sbjct: 163 GIGGKSVEDKFEFARSLLGKEVNPADS-FSDGEHVDTIAVTKGKGFQGPVKRFGVRIQYG 221
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R V IG W PAR +TVA AGQ GYH RTE NKKI ++ SQ
Sbjct: 222 KAARSSKARHVGSIGPWTPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQVD------ 275
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
++ P GGF YG++ Y++IKG GP KR+V LR+++
Sbjct: 276 ------EVNPKGGFVKYGLIKNGYVMIKGSIPGPSKRLVILRKAV 314
>gi|297619637|ref|YP_003707742.1| 50S ribosomal protein L3 [Methanococcus voltae A3]
gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
Length = 333
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 199/369 (53%), Gaps = 41/369 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R K++++P D+ RL A+ YKAG+TH + P
Sbjct: 4 KKNRPRRGSLAFSPRKRAKRIVPKIRSWPVDEK---VRLQAYPVYKAGVTHALYVENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S ++E VT++ETP + + G+ Y K GL+ L VWA L++E+ R+
Sbjct: 61 SPNAEQEVASPVTVLETPNITIAGIRVYKKDTNGLKVLTEVWAPELDQELARKL------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
T K+ ++ D L+ + +RV+ +T I K + +KK ++EI
Sbjct: 115 ------TVAKKELKSVD-------TLDSLINEIVDVRVIVYT-IPKETAIAKKKPEVVEI 160
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
+V G SV +++++A G +++ I+ VF+ E+ID + VTKGKG++G V RWG+ + +
Sbjct: 161 RVGGSSVDERLNYAKGILGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGK 220
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
+G+ R IG W P RV ++V GQ G+H RTE NK+I+K+G E
Sbjct: 221 HQRKGVGRHTGSIGPWRPRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTE-------- 272
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
+TP GGF +YGV+ Y+L+KG GP KR+V +R ++ + L EI +
Sbjct: 273 ------VTPKGGFLNYGVLKNGYVLVKGTVQGPAKRLVMIRGAIRAPVDKFGLPEI--TY 324
Query: 363 IDTSSKFGH 371
I T SK G+
Sbjct: 325 ISTESKQGN 333
>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP6]
gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP6]
Length = 334
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 179/340 (52%), Gaps = 37/340 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA +++++ ++D R+ F GYKAGMTH++ ++P S
Sbjct: 7 PRRGSLAYSPRKRAKSEVPRIRSWLEEDK---ARIAGFAGYKAGMTHVMMIDDRPRSLTE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++E PP+ VV V Y GLR +WA++L+ E+ R
Sbjct: 64 GMEISTPVTVLEVPPMNVVAVRAYESYNGGLRPAGELWAENLSPELSR------------ 111
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A T K T G L + +RVL HT + G+ +K +ME+ +NG
Sbjct: 112 AMTVPKKTRGTAPG------DLVALGDDIADVRVLVHTNPTLVSGIPKKVPEIMEMPING 165
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
GS+ ++ FA +Q+PI +VF+ +++D VTKGKG +G V RWG+ RK R
Sbjct: 166 GSMNDRLSFAQTLLGQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAMAKRKHART 225
Query: 249 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+R V +G WHPA +S+ V + GQ GYH RTE NK++ +G +
Sbjct: 226 GKVRHVGNLGPWHPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSK------------ 273
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
ITP GGFP YGV+ Y+LIKG GP KR+V +R ++
Sbjct: 274 --ITPDGGFPGYGVIKNQYILIKGSVPGPIKRLVRMRHAM 311
>gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
gi|259709744|sp|C6A159.1|RL3_THESM RecName: Full=50S ribosomal protein L3P
gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
Length = 359
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 197/374 (52%), Gaps = 28/374 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
+ PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG
Sbjct: 3 RISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59
Query: 65 SKLHK-KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
L K KE VTI+E PPL+V G+ Y + GL + V E N+
Sbjct: 60 --LTKGKEIFVPVTIVEAPPLMVYGIRAYKRGYFGLETATEVIVPDFKLE-------NYP 110
Query: 124 KSKKKAFTKY---------TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGL 174
+ K T Y K T++ + +LE + K V+ + A +
Sbjct: 111 SKRAKNVTFYKLLERRIKTLPKNYTEEVFQQKLGELEDLVKTGEVVELRALVATQPWLAR 170
Query: 175 KQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVT 234
+KK +ME V G S+ +K ++ K+I + + Q+ E++DI+ VTKGKG +G V
Sbjct: 171 IKKKPEVMEYAVGGTSIEEKFNYIKEKLGKEIRVGEILQEGELLDIVAVTKGKGTQGPVK 230
Query: 235 RWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 294
RWGV K +G RKVA IG WHPARV +TV RAGQ G+HHRTE NK++ ++G+ +
Sbjct: 231 RWGVKLTSHKDSKGRRKVATIGPWHPARVMWTVPRAGQMGFHHRTEFNKRLLRIGENGKL 290
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
+ + + +ITP GGFPHYGVV D+++I G G KR++ +R ++ R
Sbjct: 291 T------LNGEKIEITPNGGFPHYGVVKNDFIMIAGTIPGAIKRIIRMRPAVRPPAKRPP 344
Query: 355 LEEIKLKFIDTSSK 368
E ++ +I SK
Sbjct: 345 AEAPQITYISRESK 358
>gi|390960794|ref|YP_006424628.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
gi|390519102|gb|AFL94834.1| 50S ribosomal protein L3P [Thermococcus sp. CL1]
Length = 347
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 195/368 (52%), Gaps = 28/368 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA +++ +P+D R+ F GYKAGMTH++ ++PG
Sbjct: 3 KIHRPRRGSLAYSPRKRAKSIVPRIRKWPQDSE---VRMLGFAGYKAGMTHVLMIDDRPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
KE VT++E PPL V G+ Y + GL + VW LN+ VRRR
Sbjct: 60 LT-KGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETATEVWFHELNDYVRRRI------ 112
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVI--RVLAHTQIRKMKGLKQKKAHLM 182
K Y+ + K + QLE + ++ R+L HTQ +K +KK +M
Sbjct: 113 ------KTLPKNYDEEAFKAKL-GQLEDLVNDGEIVDVRLLVHTQPWLIK--LKKKPEVM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E + G V K D+A K++ V + E++D+I VTKGKG +G V RWGV
Sbjct: 164 EYAIGGDDVRAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRWGVKIQF 223
Query: 243 RKTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K R R + +G WHP RV +TV +AGQ G+HHRTE NK++ +G+ + +
Sbjct: 224 HKAQRAGKGRHIGNLGPWHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGE-----NGKLK 278
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
++ E +ITP GGFPHYG++ D+L+I+G G KR++ +R ++ + +E ++
Sbjct: 279 LDEKNEIEITPKGGFPHYGIIRSDFLMIQGTVPGSFKRIIRVRPAIRPPKKKPPVERPQI 338
Query: 361 KFIDTSSK 368
++ SK
Sbjct: 339 TYVSRESK 346
>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 358
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 200/375 (53%), Gaps = 37/375 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+G+ PRKRA+R G++ ++P+ D S R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRANRQYGRISSWPESD-SAEIRVQGFAGWKAGMTHLLVRDNNPNSSSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW-----------AQHLNEEVRRR 117
++E +AVT++E PP+ V+ V GY TP G+++ W + N+ R
Sbjct: 66 QQEVRKAVTVVEAPPMSVLAVRGYRMTPYGMQTAGEAWFNSDSGPEGLSPRLANQSRGER 125
Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKK--YCTVIRVLAHTQIRKMKGLK 175
+ K K+A ++ G+ A LE +++ C V R++ TQ +K +
Sbjct: 126 DAEEGRKPSKRAGRIPSR------GEGSPDAALEALREVDLCEV-RLIVSTQPALVKSVS 178
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
K +ME+ + GG A K+D+A I +D V++ + ID++GVTKGKG++G + R
Sbjct: 179 SKTPEIMEVALAGGDNASKLDWAEERLGGAITLDDVYETGQEIDVVGVTKGKGWQGAIKR 238
Query: 236 WGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQES 295
WG+ L K + R+ +G + V T+ +AGQ GYH+RTE+NK+I ++
Sbjct: 239 WGIKLLSHKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHNRTELNKRILRVSNPE--- 295
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
E DITP GGF +YG V Y++I+G GP KR++ R ++ R A
Sbjct: 296 ----------ESDITPSGGFLNYGEVTNPYMIIQGSLPGPSKRILRFRDAI---RPRPAK 342
Query: 356 EEIKLKFIDTSSKFG 370
E+ + ++ TSSK G
Sbjct: 343 PEVDITYVSTSSKQG 357
>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
gi|3914742|sp|O28354.1|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
Length = 331
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 41/368 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K+ PR GSL F PRKRA +++A+P+ D R+ F GYKAGMTH+V ++
Sbjct: 2 KYHRPRRGSLAFSPRKRAKSIVPRIRAWPECDR---VRMQGFAGYKAGMTHVVMIDDRKN 58
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S + +E VT+IETPP+ V V Y KT G++ VW+ +L++ + RR N K
Sbjct: 59 SPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAAEVWSNNLDDFLDRRL--NLPK 116
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
+ D++ ++ + +RV+ +TQ + G+ +K +ME
Sbjct: 117 K-----------------EPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDVMEH 159
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
++ GG+V + +D+A K+I + VF + +ID+I VTKGKG++G V RWGV L K
Sbjct: 160 RI-GGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLDAK 218
Query: 245 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R R+V +G W+P V +TV +AGQ G+H RTE NK++ K+G+ +E
Sbjct: 219 HARSSKHRRVGNLGPWNPHHVRWTVPQAGQMGFHQRTEYNKRLIKIGENGEE-------- 270
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ Y+L+ G GP KR++ +R ++ + + + + + +
Sbjct: 271 ------ITPKGGFLHYGVIRTQYVLVTGSVPGPVKRLIRMRDAI--RPPKAHFDGVNIVY 322
Query: 363 IDTSSKFG 370
+ T+SK G
Sbjct: 323 VSTTSKQG 330
>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
gi|397652527|ref|YP_006493108.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
gi|42559663|sp|Q8TZZ8.1|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
gi|428697961|pdb|3J21|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (50s Ribosomal Proteins)
gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
gi|393190118|gb|AFN04816.1| 50S ribosomal protein L3P [Pyrococcus furiosus COM1]
Length = 365
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 199/377 (52%), Gaps = 28/377 (7%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSLGF PRKRA +++++PK+ R+ F GYKAGMTHI+ ++PG
Sbjct: 3 KVHRPRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHL---NEEVRRR---- 117
+ KE VTIIETPPL V G+ Y GL + V N + R
Sbjct: 60 LT-NGKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKP 118
Query: 118 -----FYKNWCKSKKKAFTKYTKK-YETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
FYK + YT++ +E G QLE M K ++ V A +
Sbjct: 119 KPKMTFYKLLERRIATLPKNYTQEMFEQKLG------QLEDMIKEGEIVDVRAIVATQPW 172
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
+KK +ME + G SV +K ++ K++ + V ++ E++D+I VTKGKG +G
Sbjct: 173 VIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQG 232
Query: 232 VVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
V RWG+ K +G RKV IG WHPARV +TV AGQ G+HHRTE+NK++ +G+
Sbjct: 233 PVKRWGIKLRAHKDSKGRRKVGSIGPWHPARVMWTVPMAGQMGFHHRTELNKRLIAIGE- 291
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
+ + + TE +ITP GGFPHYG+V D+++I G G KR++ +R ++
Sbjct: 292 ----NGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGSVPGAIKRIIRVRPAIRPPKK 347
Query: 352 RLALEEIKLKFIDTSSK 368
+ ++ ++ ++ SK
Sbjct: 348 KPPVQRPQITYVSVESK 364
>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
DSM 2375]
gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
gi|166233159|sp|A5UL89.1|RL3_METS3 RecName: Full=50S ribosomal protein L3P
gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
gi|222434618|gb|EEE41783.1| archaeal ribosomal protein L3 [Methanobrevibacter smithii DSM 2375]
gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
Length = 336
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 193/366 (52%), Gaps = 39/366 (10%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTH-IVRDVEKPGSK 66
PR GS+ F PRKRA++ ++K++P++D K L GYK GMTH +V D +K S
Sbjct: 6 QPRKGSVAFSPRKRAAKETPRIKSWPQNDEPK---LLGLAGYKVGMTHALVTDSDK-NSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
+ + VT++E PP+VV+G+ Y KT RGL+ + V A +L+EE+ R+
Sbjct: 62 TNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITEVLADNLDEELSRKI-------- 113
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
K+Y + IQ L+K + I+VL HT K+ + +KK + E +
Sbjct: 114 -----SLPKEYNKSEAIAKIQGVLDKTED----IKVLVHTN-PKVTSVPKKKPDIFECGI 163
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G + +K++ A ++ + + + +D I TKGKG++GVV RWG+ K
Sbjct: 164 GGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQYGKAV 223
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R V IG W P+R +TVA+AGQ GYH RTE NKKI K+ A E D+
Sbjct: 224 RAGKGRHVGSIGPWTPSRTMWTVAQAGQMGYHKRTEFNKKILKIASAD--------EVDQ 275
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
I P GGF YG+V DY+L+KG GP KR+V LRQ + + +I +I
Sbjct: 276 ----INPDGGFVKYGLVKNDYVLVKGSLPGPSKRLVILRQPIRPNNKSEDMPQI--NYIS 329
Query: 365 TSSKFG 370
T SK G
Sbjct: 330 TKSKQG 335
>gi|288931510|ref|YP_003435570.1| 50S ribosomal protein L3 [Ferroglobus placidus DSM 10642]
gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
Length = 329
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 199/369 (53%), Gaps = 45/369 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKP 63
K+ PR GSLGF PRKRAS +++++P D+P RL F GYKAGMTH++ ++
Sbjct: 2 KYHRPRRGSLGFSPRKRASSIIPRIRSWPDCDEP----RLLGFAGYKAGMTHVIMIDDRK 57
Query: 64 GSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
S + +E VT++ETPP+ V+G+ Y KT GL+ VW ++ + RR
Sbjct: 58 NSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGEVWTDEVDSYLSRRL----- 112
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLME 183
+ KK D K+I E +RV+ +TQ + G+ +K +ME
Sbjct: 113 --------QIPKKKGDVDKLKEIDDIAE--------VRVITYTQPYLITGVPKKVPDVME 156
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
+V GG V +++A K++ ++ VF++ ID++ +TKGKG++G V RWGV L
Sbjct: 157 QKV-GGDVEAALNYAIEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITLDA 215
Query: 244 KTHRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R+V +G WHP RV +TV +AGQ G+H RTE NK+I K+G +
Sbjct: 216 KHARSSKHRRVGTLGPWHPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGE-------- 267
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLK 361
DI P GGF HYG+V DY+L+ G G KR+V +R ++ + + E + +
Sbjct: 268 ------DINPEGGFLHYGLVRSDYVLVSGSVPGSVKRLVRMRDAI--RPPQAVYEGVNIL 319
Query: 362 FIDTSSKFG 370
+I +SK G
Sbjct: 320 YISRASKQG 328
>gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 188
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 132/178 (74%), Gaps = 6/178 (3%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MI++ GVTKGKGY+GV +RW +LPRKTHRGL KVACIGAWH AR +F+VA A Q GYH
Sbjct: 1 MINVTGVTKGKGYKGVTSRWHTKKLPRKTHRGLPKVACIGAWHLARKAFSVAWARQKGYH 60
Query: 277 HRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKG 330
HRTE+NKKIYK+G+ ++ T++D ++K I P+GGF HY V D++++KG
Sbjct: 61 HRTEINKKIYKIGQGYLIKDGKLLKNNTSTDYDLSDKSINPLGGFVHYREVTNDFVMLKG 120
Query: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
C VG KK+V+TLR+SLL QT R ALE+I LKFIDT+SKF H RFQ +EK + G LK
Sbjct: 121 CMVGTKKQVLTLRKSLLVQTKRWALEKIDLKFIDTTSKFSHCRFQRVEEKKAFMGPLK 178
>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122720|sp|O26110.1|RL3_METTH RecName: Full=50S ribosomal protein L3P
gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 337
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 193/366 (52%), Gaps = 38/366 (10%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPK-DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GS+ F PRKRA+R +VK++P+ D+P L A GYKAGMTH++ + S
Sbjct: 6 QPRKGSVAFSPRKRAARETPRVKSWPQVDEPG----LLALAGYKAGMTHVMMVDNQKNSP 61
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
E VTI+E PPL V+ V Y KT RGL++L V A +++RR+
Sbjct: 62 TEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEVLATETKDDLRRK--------- 112
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
T Y+ + + I++ +E Y +RV+ HT R + + +KK + E +
Sbjct: 113 ---LTPPADDYDQEAAIEKIRSNME----YVADVRVIVHTNPR-LASVPKKKPEVFECGL 164
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G + +K ++A K + +F + +D I VTKGKG++G V RWG+ K
Sbjct: 165 GGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQYGKAA 224
Query: 247 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R + +G W P+R +TV +AGQ GYH RTE NK+I K+G AS+
Sbjct: 225 RSSKGRHIGSLGPWTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEADL-------- 276
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
+ P GGF YG+V DY++IKG GP KR+V LR+++ + + E ++ +I
Sbjct: 277 ----VNPDGGFVRYGLVRNDYVMIKGSVPGPTKRLVVLRKAI--RAAGKQEEAPQINYIS 330
Query: 365 TSSKFG 370
T+SK G
Sbjct: 331 TASKQG 336
>gi|356871227|emb|CCC86742.1| ribosomal subunit, partial [Millerozyma miso]
Length = 150
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L QKKAHL EIQVNGGS++ KVD+A FEK + +D+VF+++EM+D I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMVDAIAVTKGHGFEGVT 61
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 293
RWG +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N KIY++G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKIYRIGSGDD 121
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVV 321
ES+ A TEFDRT+K I PMGGF YG V
Sbjct: 122 ESNGA-TEFDRTKKTINPMGGFVRYGEV 148
>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
Length = 337
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 193/364 (53%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL F PRKRA H + +++P+ + +P +L F GYK GMTH++ + S
Sbjct: 7 PRRGSLAFSPRKRAKSHIPRFRSWPEAE-GEP-KLQGFAGYKVGMTHVIMIDDAKNSLTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETP + + + Y TP G +++ W+ +L+ ++ RR
Sbjct: 65 GAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISEAWSANLDGDIGRRI---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K K Y T+ +++ + +E+ K + IRV+ +T + G+ +KKA +ME V+G
Sbjct: 115 ---KTPKNYNTEKSLENMASLVEEGK--VSEIRVITYTIPSSVSGIPKKKADIMETAVSG 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 247
V K ++A ++ I +F + +ID+ +T+G G EG V RWG+ K R
Sbjct: 170 SDVKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQLAKNKHSRQ 229
Query: 248 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
LR+V +G W+P VS+ V + GQ GYH RTE NK+I K+ E
Sbjct: 230 SSLRQVGTLGPWNPPHVSWRVPQMGQAGYHQRTEYNKRILKVSSDVDE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
+ P GGF +YG+V DY+L+KG GP KR++ LR+ +TS A+ E +L I+T
Sbjct: 278 --VNPAGGFVNYGLVGGDYILVKGTVPGPSKRLIRLREPTRPKTS--AVGEPQLMHINTQ 333
Query: 367 SKFG 370
S+ G
Sbjct: 334 SRQG 337
>gi|356871225|emb|CCC86741.1| ribosomal subunit, partial [Millerozyma farinosa]
Length = 150
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L QKKAHL EIQVNGGS++ KVD+A FEK + +D+VF+++EMID I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVT 61
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 293
RWG +LPRKTHRGLRKVACIGAWHPA V +TV RAGQNGYHHRT +N K+Y++G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWTVPRAGQNGYHHRTSINHKVYRVGSGED 121
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVV 321
ES+ A TEFDRT+K I PMGGF YG V
Sbjct: 122 ESNGA-TEFDRTKKTINPMGGFVRYGEV 148
>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
gi|109893528|sp|Q3IMY8.1|RL3_NATPD RecName: Full=50S ribosomal protein L3P
gi|76558922|emb|CAI50518.1| 50S ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
Length = 336
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 193/367 (52%), Gaps = 42/367 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PR RA+ + ++P DD +P L F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVAINDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+E VT++ETPP+ V V Y TP G R L VW ++E++ R
Sbjct: 65 GQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTEVWTDEVHEDLERSL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D + DI+ L+ + +RV+ HT + + +K+ +ME +V G
Sbjct: 115 ----SVPEEQSGDIEGDIRTALD--EGALADVRVITHTVPGALSSVPKKEPDVMETRVGG 168
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS++ +VDFA + + + VF+ E D+ G+TKGKG +G V RWGV + K
Sbjct: 169 GSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHA 228
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDLG--------------- 273
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
+ D++P GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 274 -DDDVSPDGGFVNYGEVDGPYALVKGSVPGPDKRLVRFRPAVRPGDQPRLDPE---VRYV 329
Query: 364 DTSSKFG 370
T+S G
Sbjct: 330 STASNQG 336
>gi|134035929|gb|ABO47804.1| ribosomal protein L3 [Omphisa fuscidentalis]
Length = 135
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 118/134 (88%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PRHGS+GF P+KR+ RHRGKVKAFPKDDPSKP LTAF+GYKAGMTH+VR+ ++PGSK++
Sbjct: 2 PRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKIN 61
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KKE EAVTIIETPP+V VGVVGY++TP GLR+L T+WA+H++E+ RRRFYKNW K KKK
Sbjct: 62 KKEIVEAVTIIETPPMVAVGVVGYIETPHGLRALLTIWAEHMSEDCRRRFYKNWYKCKKK 121
Query: 129 AFTKYTKKYETDDG 142
AFTK +KK++ + G
Sbjct: 122 AFTKASKKWQDELG 135
>gi|356871217|emb|CCC86737.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871219|emb|CCC86738.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871221|emb|CCC86739.1| ribosomal subunit, partial [Millerozyma farinosa]
gi|356871223|emb|CCC86740.1| ribosomal subunit, partial [Millerozyma farinosa]
Length = 150
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/148 (66%), Positives = 117/148 (79%), Gaps = 1/148 (0%)
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
L QKKAHL EIQVNGGS++ KVD+A FEK + +D+VF+++EMID I VTKG G+EGV
Sbjct: 2 LSQKKAHLAEIQVNGGSISDKVDWAKEHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVT 61
Query: 234 TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 293
RWG +LPRKTHRGLRKVACIGAWHPA V ++V RAGQNGYHHRT +N K+Y++G
Sbjct: 62 HRWGTKKLPRKTHRGLRKVACIGAWHPANVQWSVPRAGQNGYHHRTSINHKVYRVGSGED 121
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVV 321
ES+ A TEFDRT+K I PMGGF YG V
Sbjct: 122 ESNGA-TEFDRTKKTINPMGGFVRYGEV 148
>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
gi|109893523|sp|Q2NFV6.1|RL3_METST RecName: Full=50S ribosomal protein L3P
gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
Length = 337
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 138/370 (37%), Positives = 196/370 (52%), Gaps = 46/370 (12%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
PR GS+ F PRKR +R +V +P+ D + L AF GYK GMTH+ + GS
Sbjct: 6 QPRKGSVAFSPRKRVARETPRVSTWPELDEAG---LLAFAGYKVGMTHVTALDSRKGSPT 62
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ-HLNEEVRRRFYKNWCKSK 126
E VTI+E PPLVV+G+ Y KT GL++L V A +L++E+ R+
Sbjct: 63 ENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKTLTDVIANDNLDDELSRKI-------- 114
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKY---CTVIRVLAHTQIRKMKGLKQKKAHLME 183
+ K+ DI+A++E+++ IRVL HT+ K+ + +KK ++E
Sbjct: 115 --SVPKF----------DDIEAKIEELRNKIDDIDEIRVLIHTK-PKLTSVPKKKPEVLE 161
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLP 242
+ G SV K+++A K+I VFQ+ E D I TKGKG +G V R+GV +
Sbjct: 162 FGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPVKRFGVRIQYG 221
Query: 243 RKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
+ G+ R V IG W P R +TVA GQ GYH RTE NKK+ K+G
Sbjct: 222 KAARSGIERHVGSIGPWTPNRTMWTVAMQGQMGYHKRTEYNKKLLKIG------------ 269
Query: 302 FDRTEKD-ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
D +E D I P GGF YG V +Y+L+KG GP KR+V LR+ + + ++ EI
Sbjct: 270 -DESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSKRLVVLRKGVRNASKQVTAPEI-- 326
Query: 361 KFIDTSSKFG 370
+I T+SK G
Sbjct: 327 SYISTTSKQG 336
>gi|448618114|ref|ZP_21666459.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
gi|445747669|gb|ELZ99124.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
Length = 338
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 193/370 (52%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPDDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ +S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++K + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPAELKNVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA E+ + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVEEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGD--------- 277
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
D + GGF +YG V+ Y LIKG GP KR++ R ++ RL E +
Sbjct: 278 ------DASVEGGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+F+ T+S G
Sbjct: 329 RFVSTASNQG 338
>gi|119580724|gb|EAW60320.1| ribosomal protein L3, isoform CRA_i [Homo sapiens]
gi|194387408|dbj|BAG60068.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/122 (77%), Positives = 113/122 (92%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+SRHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP+VVVG+VGYV+TPRGLR+ TV+A+H+++E +RRFYK
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYK 120
Query: 121 NW 122
NW
Sbjct: 121 NW 122
>gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 358
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 192/368 (52%), Gaps = 23/368 (6%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+G+ PRKRA R G++ ++P D S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQ------HLNEEVRRRFYKNW 122
++E +AVT++E PP+ V+ + GY TP G+++ WA L +
Sbjct: 66 RQEVRKAVTVVEAPPMCVLAIRGYRMTPYGMQTAGEAWADVDGGPDGLTPRFANQSRGEH 125
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+ + + +K + + +G A IR++ TQ +K + K +M
Sbjct: 126 DRDEGRKPSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALVKSVTSKTPEIM 185
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E+ + GG + K+++A I +D V+Q + ID++GVTKGKG++G + RWG+ L
Sbjct: 186 EVALVGGDNSSKMEWARERLGGTISLDDVYQTGQEIDVVGVTKGKGWQGSIKRWGIKLLS 245
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
K + R+ +G + V T+ +AGQ GYH RTE+NK+I ++
Sbjct: 246 HKNSKRRRQGGNMGDFGTRYVRKTIRQAGQVGYHQRTELNKRILRISNPE---------- 295
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
E DITP GGF +YG V Y++I+G GP KR++ R+++ SR E+ + +
Sbjct: 296 ---ESDITPAGGFLNYGEVTNPYMIIQGSLPGPAKRMLRFREAI---RSRPTKPEVDITY 349
Query: 363 IDTSSKFG 370
+ TSSK G
Sbjct: 350 VSTSSKQG 357
>gi|448611747|ref|ZP_21662177.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
gi|445742508|gb|ELZ94002.1| 50S ribosomal protein L3P [Haloferax mucosum ATCC BAA-1512]
Length = 338
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 192/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ +S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFES 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++K + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELKNVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+ + S
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEASVE---- 282
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
GGF +YG V+ Y L+KG GP KR++ R ++ RL E +
Sbjct: 283 -----------GGFVNYGEVDGSYALVKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+F+ T+S G
Sbjct: 329 RFVSTASNQG 338
>gi|347524198|ref|YP_004781768.1| 50S ribosomal protein L3 [Pyrolobus fumarii 1A]
gi|343461080|gb|AEM39516.1| ribosomal protein L3 [Pyrolobus fumarii 1A]
Length = 346
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 206/379 (54%), Gaps = 41/379 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK PR GSLG PRKRASR K++++P+ KP L AFL YKAGMTH+
Sbjct: 1 MGARKKHAPRRGSLGLRPRKRASRLIPKIRSWPEVKSEKPLPL-AFLAYKAGMTHVFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPR-GLRSLCTVWAQHLNEEVRRRFY 119
++PGS KE VTI+E PP+VV+ V Y P GL +L WA+ E++ +++
Sbjct: 60 DRPGSTTEGKEIFVPVTILEAPPMVVLAVRVYGYDPNIGLYTLTEAWAR--PEDLVQQYN 117
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
+ + K F D ++ ++ ++E++ +R++A TQ R + GL +KK
Sbjct: 118 LDIYRVLPKTF-------RVPDPEQQLK-KIEELLPKVYDVRIIAATQPRLVGGLSKKKP 169
Query: 180 HLMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI++ GGS + ++ +A K + VFQ+ +++D+I VTKGKG++GV+ R+GV
Sbjct: 170 DLIEIKIGGGSGIEERFQYAASILGKTFTVRDVFQEGQLVDVIAVTKGKGFQGVIKRFGV 229
Query: 239 TRLPR--KTHRGLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAS 292
LP+ K +G R++ IGA P V + GQ G+H RTE NK+I K+G
Sbjct: 230 KELPKWHKHRKGSRRIGARSPGIGAISP------VPQPGQMGFHRRTEYNKRILKIGDNG 283
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
E +TP GGF HYG+V Y+++ G GP KR + LR + + +
Sbjct: 284 WE--------------VTPAGGFLHYGIVRSTYVMLAGSVPGPAKRPIVLRHPV--RPTW 327
Query: 353 LALEEIKLKFIDTSSKFGH 371
++ +I +SK G+
Sbjct: 328 TPPGPPRITYISLASKQGN 346
>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
gi|166233154|sp|A6UV68.1|RL3_META3 RecName: Full=50S ribosomal protein L3P
gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
Length = 333
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 194/369 (52%), Gaps = 41/369 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R K++++P+ + +L AF YKAG TH + P
Sbjct: 4 KRNRPRRGSLAFSPRKRAKRPVPKIRSWPERET---VKLLAFPVYKAGTTHALYKENNPK 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S ++ VT++E P + + G+ Y K +GL++L VWA ++E+ R+
Sbjct: 61 SPNADQDVFTPVTVMEAPDITIAGIRAYGKDTKGLKALTEVWADSFDKELGRKIN---LP 117
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
+ KA T+ +L+++ +R + HT K L +KK ++EI
Sbjct: 118 KEPKANTE----------------KLDEVADKIVEVRAIVHTN-PKDTNLPKKKPEIIEI 160
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPR 243
++ G +++ + +A K++ I+ VF E ID + +TKGKG++G V RWG+ + +
Sbjct: 161 KIGGKNISDIIAYAKDIIGKKLSINDVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGK 220
Query: 244 KTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
++G+ R IG W P R+ +TV AGQ G+H RTE NK+I K+G+ E
Sbjct: 221 HQNKGVGRHTGSIGPWTPKRIMWTVPMAGQVGFHQRTEYNKRILKIGENGSE-------- 272
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
I P GGF +YGVV +Y+L+KG GP KR+V LR+++ + L E L +
Sbjct: 273 ------IVPKGGFLNYGVVKNNYVLVKGSVQGPAKRMVVLREAIRNPEDKFGLPE--LTY 324
Query: 363 IDTSSKFGH 371
+ T SK G+
Sbjct: 325 VSTESKQGN 333
>gi|448411357|ref|ZP_21575822.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
gi|445670545|gb|ELZ23144.1| 50S ribosomal protein L3P [Halosimplex carlsbadense 2-9-1]
Length = 349
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 190/377 (50%), Gaps = 41/377 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR RA+ + ++P DD +P L F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRTRAASETPRFNSWPDDD-GQPG-LQGFAGYKAGMTHVVLINDEPDSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPPL V + Y TP G R L VWA + E+ R
Sbjct: 65 GMEETVPVTVIETPPLRAVALRAYEDTPYGQRPLTEVWADEFHGELDRTLDVPEDHDADA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + + +E D +RV+ HT + G+ +KK +ME +V G
Sbjct: 125 AEEQIRQAHEAGD---------------LGDVRVITHTVPTDIAGVPRKKPEVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS++ ++DF + + + VF+ E D+ VTKGKG +G V RWGV + K
Sbjct: 170 GSLSDRLDFGLDLVAEGGEHSMTDVFRAGEYADVAAVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGT------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D T GGF +YG V+ Y L+KG GP +RVV R ++ RL E ++++
Sbjct: 278 ---DATVEGGFVNYGEVDGPYTLVKGSVPGPDQRVVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DT-SSKFGHGRFQTTQE 379
T S++ G G TTQE
Sbjct: 332 STQSNQGGRGTAATTQE 348
>gi|225706934|gb|ACO09313.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 143
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 115/131 (87%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGSLGFLPRKR+ RHRGKVK+FPKDDPSKP LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFSAPRHGSLGFLPRKRSRRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVTI+ETPP++VVGVVGYV+TPRGLRS T++A+H+++E +RRFY+
Sbjct: 61 DRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFKTIFAEHVSDECKRRFYR 120
Query: 121 NWCKSKKKAFT 131
N ++A T
Sbjct: 121 NCSSQAQRALT 131
>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
Length = 338
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 189/366 (51%), Gaps = 38/366 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDSD-GQPS-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW ++E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTEVWGSEFHDELDRTL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D + +++A +E +RV+ HT +K + +K+ +ME +V G
Sbjct: 115 ---NVPENHDADAAEDELRAAIEAGD--VADLRVITHTVPSDLKNVPKKRPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS++ + DFA E + I VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GSISDRADFALELLEDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG + S
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEASVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
GGF +YG V+ Y LIKG GP KR+V R + ++ T + L+ +++++
Sbjct: 283 --------GGFVNYGEVDGPYALIKGSVPGPNKRLVRFRPA-VRPTDQPRLDP-EVRYVS 332
Query: 365 TSSKFG 370
T S G
Sbjct: 333 TESNQG 338
>gi|429190344|ref|YP_007176022.1| 50S ribosomal protein L3 [Natronobacterium gregoryi SP2]
gi|448326256|ref|ZP_21515623.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
gi|429134562|gb|AFZ71573.1| archaeal ribosomal protein L3 [Natronobacterium gregoryi SP2]
gi|445612913|gb|ELY66630.1| 50S ribosomal protein L3P [Natronobacterium gregoryi SP2]
Length = 339
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 190/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDQANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP GL + VW +E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGLNPVTEVWTDEFADELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y++D + +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGR--VDDVRVITHTVPSEVPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDF + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFGLELLVDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGNGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP+KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|333987679|ref|YP_004520286.1| 50S ribosomal protein L3 [Methanobacterium sp. SWAN-1]
gi|333825823|gb|AEG18485.1| ribosomal protein L3 [Methanobacterium sp. SWAN-1]
Length = 336
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 193/368 (52%), Gaps = 43/368 (11%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
PR GS+ F PRKRA+ ++ A+P+ + + C L F GYK GMTHI + S
Sbjct: 6 QPRKGSVAFSPRKRAASETPRITAWPETEEA--C-LLGFPGYKVGMTHITMLDSRKSSPT 62
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFY---KNWCK 124
E VTI+E PP+VV+G+ Y + RGL++L + A L+E+++R +N +
Sbjct: 63 EGMEISTPVTILEAPPIVVMGIRAYRQDTRGLKTLADILANDLDEDLQRTISLPKENDLE 122
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
+K K F EKM + IRVL HT+ R + + +KK ++E
Sbjct: 123 AKLKDFK-------------------EKMDEIVD-IRVLVHTKPR-LASVPKKKPEILEC 161
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
V G +VA+K+D+A K++ VF E D I +TKGKG++G V R+G+ K
Sbjct: 162 GVGGKTVAEKLDYAVSVLGKELNPSDVFADGEHTDSIAITKGKGFQGPVKRFGIRIQYGK 221
Query: 245 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R R V IG W+P+R +TVA AGQ GYH RTE NKKI K+G A E
Sbjct: 222 AARSSKERHVGSIGPWNPSRTMWTVAMAGQMGYHKRTEFNKKILKIGGAD--------EV 273
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
D + P GGF YG+V Y ++KG GP KR+V LR+++ + +I +
Sbjct: 274 DA----VNPDGGFVKYGLVKNGYFIVKGSVPGPSKRLVMLRKAIRPHGKHDDVPQI--SY 327
Query: 363 IDTSSKFG 370
I T+SK G
Sbjct: 328 ISTASKQG 335
>gi|448704116|ref|ZP_21700597.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
gi|445796505|gb|EMA47009.1| 50S ribosomal protein L3P [Halobiforma nitratireducens JCM 10879]
Length = 339
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRAS + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G+ + VW +E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFADELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y++D + +++ LE+ + +R + HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDSDAAEDELRGLLEEGR--VDDVRAITHTVPSEVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDF E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFGLDLLENGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGNGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP+KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3 [Aeropyrum pernix K1]
gi|6685859|sp|Q9YFM2.1|RL3_AERPE RecName: Full=50S ribosomal protein L3P
gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
Length = 344
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 203/378 (53%), Gaps = 43/378 (11%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK PR GSLGF PRKRASR +VK +P+ D KP L AFLGY+AGMTH+
Sbjct: 1 MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVD 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRSLCTVWAQHLNE-EVRRRF 118
++PG KE VTI+ETPP+ V V Y P RG SL WAQ E E++RR
Sbjct: 60 DRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRI 119
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
++TD K ++ +L+K + +R++A +Q + GL +KK
Sbjct: 120 -------------STLGSFDTDKMLKSLEERLDKAED----VRLIAASQPKLAGGLSKKK 162
Query: 179 AHLMEIQVNGGS-VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
L+EI+V G S V + D+A I ++ VF++ +++D+I VTKGKG++GV+ RWG
Sbjct: 163 PDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWG 222
Query: 238 VTRLPR--KTHRGLRKVACIGAWHPARVSF-TVARAGQNGYHHRTEMNKKIYKLGKASQE 294
V LPR K +G R+ IGA R +F +AGQ G+H RTE NK+I +
Sbjct: 223 VKELPRWHKHRKGSRR---IGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMI------ 273
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL--LKQTSR 352
D +TP GGF YGVV ++++ G G KR + +R ++ + +
Sbjct: 274 --------DDDGYKVTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLK 325
Query: 353 LALEEIKLKFIDTSSKFG 370
L + + ++ +I +SK G
Sbjct: 326 LGVRKPEITYISLASKQG 343
>gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 358
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 194/368 (52%), Gaps = 23/368 (6%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+G+ PRKRA R G++ ++P D S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PRRGSMGYSPRKRAIRQYGRISSWPDSDSSE-VRVQGFAGWKAGMTHVLVRDNNPHSPSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLN--EEVRRRFYKNW---- 122
++E +AVT++E PP+ V+ + GY T G+++ WA + + RF
Sbjct: 66 RQEVRKAVTVVEAPPMCVLAIRGYRMTSYGMQTAGEAWADADGGPDGLMPRFANQSQGEH 125
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+ + + +K + + +G A IR++ TQ +K + K +M
Sbjct: 126 DRDEGRKPSKRGGRIPSRNGNSPDAAMESLQNADLCEIRLIVSTQPALVKSVPSKTPEIM 185
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E+ + GG + K+++A +I +D V+Q + ID++G+TKGKG++G + RWG+ L
Sbjct: 186 EVALVGGDNSSKLEWAREKLGGEISLDDVYQTGQEIDVVGITKGKGWQGSIKRWGIKLLS 245
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
K + R+ +G + V T+ +AGQ GYH RTE+NK+I ++
Sbjct: 246 HKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHQRTELNKRILRISNPE---------- 295
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
E DITP GGF +YG V Y++I+G GP KR++ R+++ SR E+ + +
Sbjct: 296 ---ESDITPAGGFLNYGEVTNPYMIIQGSLPGPAKRMLRFREAI---RSRPTKPEVDVTY 349
Query: 363 IDTSSKFG 370
+ TSSK G
Sbjct: 350 VSTSSKQG 357
>gi|448565515|ref|ZP_21636382.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
gi|448583470|ref|ZP_21646826.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
gi|445715259|gb|ELZ67015.1| 50S ribosomal protein L3P [Haloferax prahovense DSM 18310]
gi|445729699|gb|ELZ81294.1| 50S ribosomal protein L3P [Haloferax gibbonsii ATCC 33959]
Length = 338
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 189/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKR ++ ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRVTKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VW ++E+ R +N S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWTDEFHDELDRVLDLPAENTFDS 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPAELANVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+ + S
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEASVE---- 282
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
GGF +YG V+ Y LIKG GP KR++ R ++ RL E +
Sbjct: 283 -----------GGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|433420037|ref|ZP_20405423.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
gi|448545986|ref|ZP_21626313.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
gi|448548060|ref|ZP_21627404.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
gi|448557083|ref|ZP_21632518.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
gi|448569070|ref|ZP_21638482.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
gi|448600511|ref|ZP_21656007.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
gi|432199294|gb|ELK55485.1| 50S ribosomal protein L3P [Haloferax sp. BAB2207]
gi|445703332|gb|ELZ55263.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-646]
gi|445714762|gb|ELZ66520.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-645]
gi|445714952|gb|ELZ66709.1| 50S ribosomal protein L3P [Haloferax sp. ATCC BAA-644]
gi|445725220|gb|ELZ76845.1| 50S ribosomal protein L3P [Haloferax lucentense DSM 14919]
gi|445735228|gb|ELZ86780.1| 50S ribosomal protein L3P [Haloferax alexandrinus JCM 10717]
Length = 338
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 190/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGD--------- 277
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
D + GGF +YG V+ Y LIKG GP KR++ R ++ RL E +
Sbjct: 278 ------DASVEGGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|448606195|ref|ZP_21658774.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
gi|448623080|ref|ZP_21669729.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
gi|445739612|gb|ELZ91119.1| 50S ribosomal protein L3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445753588|gb|EMA05005.1| 50S ribosomal protein L3P [Haloferax denitrificans ATCC 35960]
Length = 338
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 190/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGD--------- 277
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
D + GGF +YG V+ Y LIKG GP KR++ R ++ RL E +
Sbjct: 278 ------DASVDGGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|375083294|ref|ZP_09730320.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
gi|374742025|gb|EHR78437.1| 50S ribosomal protein L3P [Thermococcus litoralis DSM 5473]
Length = 361
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 194/377 (51%), Gaps = 32/377 (8%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA +++ +P++ + R+ F GYKAGMTH++ + PG
Sbjct: 3 KISRPRRGSLAYSPRKRAKSIVPRIRKWPQE---QEVRMLGFAGYKAGMTHVLMIDDAPG 59
Query: 65 SKLHK-KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
L K KE VTI+E PPL+V GV Y + GL + V E N+
Sbjct: 60 --LTKGKEIFVPVTIVEAPPLIVYGVRAYKQGYLGLETATEVIVPDFKLE-------NYP 110
Query: 124 KSKKKAFTKY----------TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKG 173
K K T Y K Y + ++ + +LE + K ++ V A +
Sbjct: 111 SKKAKNVTFYKLLERRIKTLPKNYNEETFQQKL-GELEDLVKSGEIVEVRALVATQPWLA 169
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
+KK +ME V G SV +K + K++ V ++ E++DI+ VTKGKG +G V
Sbjct: 170 RIKKKPEVMEYAVGGTSVEEKFAYIKERLGKELRASEVLKEGELLDIVAVTKGKGTQGPV 229
Query: 234 TRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
RWG+ K R R V +G WHPARV +TV +AGQ G+HHRTE NK++ ++G+
Sbjct: 230 KRWGIKIQFHKAQRAGKARHVGNLGPWHPARVMWTVPQAGQMGFHHRTEFNKRLLRIGE- 288
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
+ + D E +ITP GGFPHYG+V D+L+I G G KR++ +R ++
Sbjct: 289 -----NGKLKLDGEEIEITPKGGFPHYGIVRNDFLMIAGTIPGAIKRIIRVRPAIRPPAK 343
Query: 352 RLALEEIKLKFIDTSSK 368
+ +E ++ ++ SK
Sbjct: 344 KPPVEAPQITYVSRESK 360
>gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2]
gi|448290689|ref|ZP_21481835.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2]
gi|445578060|gb|ELY32475.1| 50S ribosomal protein L3P [Haloferax volcanii DS2]
Length = 338
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 190/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAVKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPHE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ S
Sbjct: 65 GMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTEVWAGEFHDELDRVLDLPAEDTFDS 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
A + + E DD +RV+ HT ++ + +KK +ME +
Sbjct: 125 DADALREAVEAGEVDD------------------LRVITHTVPSELANVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGD--------- 277
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
D + GGF +YG V+ Y LIKG GP KR++ R ++ RL E +
Sbjct: 278 ------DASVEGGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 342
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 31/364 (8%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GS+ F PRKRA R G+VK++P + + ++ F GYKAGM+H++ E PGS
Sbjct: 7 PKRGSMAFGPRKRARRQTGRVKSWPSNGNGE-VKIQGFAGYKAGMSHVLIRDENPGSPSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+E +AVTI+ETPPL ++G+ GY +T G ++ WA EE+ +
Sbjct: 66 GQEIRKAVTIVETPPLQILGIRGYHQTYYGKQTAGEAWAS--GEEI---------AEAQP 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKK--YCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
+ T D ++ I A E +K C V R++ TQ K+K + K ++ME+ +
Sbjct: 115 NLVRRVPARNTHDTEEHITALKEMAEKGQLCEV-RLIVSTQPSKVKSIPTKTPNIMELGL 173
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
NG + ++ +A + + + VF +D+I VTKGKG++G + RWG+ L K
Sbjct: 174 NGSDITSRIAWAEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIKRWGIKLLSHKNS 233
Query: 247 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+ R+ +G + V T+ +AGQ GYH RTE NKK+ ++ E
Sbjct: 234 KRRRQGGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKKVIRISSPD-------------E 280
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
++TP GGF YG V DY++++G GP KR++ R+S+ R + + + ++ TS
Sbjct: 281 DEVTPDGGFLRYGEVTNDYIIVQGSLPGPSKRLLRFRESV---RPRKTQDPVDITYVSTS 337
Query: 367 SKFG 370
SK G
Sbjct: 338 SKQG 341
>gi|448392361|ref|ZP_21567135.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
gi|445664451|gb|ELZ17160.1| 50S ribosomal protein L3P [Haloterrigena salina JCM 13891]
Length = 339
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 191/367 (52%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y +TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD + +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGR--VDDVRVITHTVPSEIPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +VDFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|448338134|ref|ZP_21527186.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
gi|445623309|gb|ELY76731.1| 50S ribosomal protein L3P [Natrinema pallidum DSM 3751]
Length = 339
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+Y+TD +++ E+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVGDRVDFALEIIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|284165492|ref|YP_003403771.1| 50S ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
Length = 339
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 191/367 (52%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y +TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD + +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDTDAAEDELRGLLEQGR--VDDVRVITHTVPSEIPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++DFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRIDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|190895944|gb|ACE96485.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895946|gb|ACE96486.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895948|gb|ACE96487.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895950|gb|ACE96488.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895952|gb|ACE96489.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895954|gb|ACE96490.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895958|gb|ACE96492.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895960|gb|ACE96493.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895962|gb|ACE96494.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895964|gb|ACE96495.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895966|gb|ACE96496.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895968|gb|ACE96497.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895970|gb|ACE96498.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895972|gb|ACE96499.1| casein kinase II regulatory subunit [Populus tremula]
gi|190895974|gb|ACE96500.1| casein kinase II regulatory subunit [Populus tremula]
Length = 99
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/99 (95%), Positives = 99/99 (100%)
Query: 162 VLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
VLAHTQIRKMKGLKQKKAHLMEIQVNGG++AQKVDFAYGFFEKQ+PIDAVFQKDEMID+I
Sbjct: 1 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVI 60
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 260
GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 61 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99
>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
gi|42559672|sp|Q8ZW52.1|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
Length = 338
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 185/350 (52%), Gaps = 45/350 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE +AVT+++ PPL V G Y P R++ VWA L
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVWGFRLYTLDPTNGYKRAVAEVWASEL------------ 110
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
K+ + T K D+ QL+K++++ V +R L TQ + G+ +K
Sbjct: 111 --------PKFLHRVLTLPEKLDVDKQLKKVEEFRDVAVDVRALVATQ-PHLSGIGKKTP 161
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI + G SV ++++FA K + VF +++D+I VTKGKGY+GV+ R+GV
Sbjct: 162 ELLEIPIGGVPSVDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVIKRFGV 221
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA V FT R GQ G+H RTE NK++ K+G+ E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE-- 278
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
ITP GFPHYGVV Y+LI+G G +KR+V LR +
Sbjct: 279 ------------ITPKSGFPHYGVVKGPYILIQGSVPGARKRLVVLRHPV 316
>gi|448345585|ref|ZP_21534474.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
gi|445633518|gb|ELY86705.1| 50S ribosomal protein L3P [Natrinema altunense JCM 12890]
Length = 339
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+Y+TD +++ E+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVDFALEIIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|397773843|ref|YP_006541389.1| ribosomal protein L3 [Natrinema sp. J7-2]
gi|448341390|ref|ZP_21530351.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
gi|397682936|gb|AFO57313.1| ribosomal protein L3 [Natrinema sp. J7-2]
gi|445628072|gb|ELY81383.1| 50S ribosomal protein L3P [Natrinema gari JCM 14663]
Length = 339
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 190/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+Y+TD +++ E+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDEYDTDAATDELRGLQEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVDFALETIEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|82408380|gb|ABB73034.1| ribosomal protein L3 [Mytilus edulis]
Length = 160
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 134/156 (85%), Gaps = 1/156 (0%)
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
LTAF+GYKAGM+HIVR+V++PGSK HKKE EAVTI+E PP++VVGVVGY++TP GLR+
Sbjct: 6 LTAFIGYKAGMSHIVREVDRPGSKSHKKEIVEAVTILEAPPMMVVGVVGYIETPSGLRAF 65
Query: 103 CTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRV 162
T++A+HL+EE +RRFYKNW +SKKKAF+K KK++ + GKK+I+ KMKKYC VIRV
Sbjct: 66 KTIFAEHLSEECKRRFYKNWYRSKKKAFSKSAKKWQDEAGKKEIERDFNKMKKYCRVIRV 125
Query: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 198
LAHTQ + MK +QKKAH+MEIQVNGG+++QKVD+A
Sbjct: 126 LAHTQTKLMKK-RQKKAHIMEIQVNGGTISQKVDWA 160
>gi|448302866|ref|ZP_21492816.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593873|gb|ELY48040.1| 50S ribosomal protein L3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 339
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFAPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDVDAATDELRGYLEEGR--VDDVRVITHTVPGEIPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDFA E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSLDERVDFALETVEDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|313125790|ref|YP_004036060.1| 50S ribosomal protein L3 [Halogeometricum borinquense DSM 11551]
gi|448285629|ref|ZP_21476870.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
gi|445576265|gb|ELY30722.1| 50S ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
Length = 338
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 186/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+ + PR+RA++ +++++P DD S L F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMAYSPRQRAAKEVPRIRSWPDDDGS--PGLQGFAGYKAGMTQVMMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V V Y TP G + L VWA E + R
Sbjct: 65 GMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTEVWASEFVENLDRTLD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D D++A +E + IRV+ HT MK + +KK +ME +V G
Sbjct: 116 --LPSEDTFEED--ADDLRAAVEAGE--VDDIRVITHTVPASMKNIPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++ DFA E+ + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GSLQERSDFALDLVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D T GGF YG V+ Y L+KG GP KR++ R ++ RL E ++F+
Sbjct: 278 ---DATVDGGFVGYGEVDGPYALVKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---VRFV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|389848017|ref|YP_006350256.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
gi|388245323|gb|AFK20269.1| 50S ribosomal protein L3P [Haloferax mediterranei ATCC 33500]
Length = 327
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 189/365 (51%), Gaps = 46/365 (12%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF PRKRA + ++K++P DD S L F GYKAGMTH++ ++ S E
Sbjct: 1 MGFSPRKRAVKEVPRIKSWPDDDGS--PALQGFAGYKAGMTHVMMVNDEADSPREGMEES 58
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKSKKKAF 130
VT++ETPP+ V + Y +TP G++ VWA ++E+ R ++ +S A
Sbjct: 59 VPVTVVETPPMRAVALRAYEQTPYGMKPKTEVWASEFHDELDRVLDLPAEDTFESDADAL 118
Query: 131 TKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS 190
+ + E DD +RV+ HT ++K + +KK +ME +V GGS
Sbjct: 119 REAVEAGEVDD------------------LRVITHTVPAELKNVPKKKPDVMETRVGGGS 160
Query: 191 VAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
+ ++ DFA E+ + + VF+ E +D GVTKGKG +G V RWGV + K R
Sbjct: 161 MVERADFALDLVEEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKGKHARQ 220
Query: 249 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+
Sbjct: 221 GWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGD-------------- 266
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFIDT 365
D + GGF +YG V+ Y LIKG GP KR++ R ++ RL E ++F+ T
Sbjct: 267 -DASVEGGFVNYGEVDGSYALIKGSLPGPNKRLLRFRPAIRPNDQPRLDPE---VRFVST 322
Query: 366 SSKFG 370
+S G
Sbjct: 323 ASNQG 327
>gi|448309694|ref|ZP_21499550.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
gi|445589551|gb|ELY43781.1| 50S ribosomal protein L3P [Natronorubrum bangense JCM 10635]
Length = 339
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRVYEDTPYGMKPLTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDVDAATDELRGYLEEGR--IDDVRVITHTVPGEVPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDFA E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSIEERVDFALETVEDGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
gi|42559662|sp|Q8TY90.1|RL3_METKA RecName: Full=50S ribosomal protein L3P
gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
Length = 361
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 184/338 (54%), Gaps = 39/338 (11%)
Query: 13 SLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKET 72
SL F PRKRASR +++++P ++ R+ F GYKAGMTH + + P S +E
Sbjct: 16 SLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPNSPTEGEEI 72
Query: 73 CEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTK 132
VTI++ PP+ V + Y TP G R + WA+ + EE+ + FT
Sbjct: 73 SVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAE-IPEEL----------EMDRVFTV 121
Query: 133 YTKKYETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS 190
DG+ ++E++ V IRV+ TQ +K G+ +KK +ME ++ G
Sbjct: 122 ------PKDGEAGDLDKIEELVDEGIVEEIRVIVATQPKKA-GVPKKKPDVMEYRIGGKD 174
Query: 191 VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL- 249
V ++ ++A ++I VF + E++D+ +TKGKG++GVV RWGVT RKT R
Sbjct: 175 VRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTIQDRKTQRKQK 234
Query: 250 -RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
R + IG P+RV +TV AGQ GYH RTE NK+I K+G+ +E
Sbjct: 235 GRHIGSIGPITPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEE-------------- 280
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+TP GGF +YGVV DY++I G GPKKR++ +R ++
Sbjct: 281 VTPRGGFVNYGVVRGDYIMIHGTVPGPKKRLIRVRPAV 318
>gi|448362304|ref|ZP_21550915.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
gi|445648825|gb|ELZ01773.1| 50S ribosomal protein L3P [Natrialba asiatica DSM 12278]
Length = 340
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 188/368 (51%), Gaps = 40/368 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD +++ LE+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGR--VDDVRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
SV +VD+A E + ++ +F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 SSVEDRVDYALELLEDGGGEHVMNDMFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA----------- 279
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D T GGF +YG V+ ++LIKG GP+KR+V R ++ RL E +++
Sbjct: 280 ----DATVDGGFINYGEVDGPHVLIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRY 332
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 333 VSTASNQG 340
>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 332
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 188/349 (53%), Gaps = 31/349 (8%)
Query: 10 RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
RHGSL + PRKRA+ + +++P+ KP L AF GYK GM H++ ++PG
Sbjct: 4 RHGSLQYYPRKRAATQKALFRSYPELSVDKPT-LVAFPGYKVGMVHVLLKEDRPGKLNLG 62
Query: 70 KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
++ A T+IETPP+ +VG Y + GL+ L T L E KK
Sbjct: 63 QQITLASTVIETPPIEIVGFRAYKEGYYGLKPLTTA----LRIE------------KKDP 106
Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189
++ E D + ++LE K + IR+L++T+ + G+ +KK MEI V GG
Sbjct: 107 ISRTLTIGEGVDNFNEALSKLEGAK--VSEIRILSYTR-PDLAGIHKKKPEFMEIPVKGG 163
Query: 190 SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249
+ ++++FA Q+ +D+VF+ +++D+ VTKG G++GVV R+G+ L K +G
Sbjct: 164 EMEERIEFAKSLVGSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLRHKAGKGR 223
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDI 309
+V +G+ HP V++ V RAGQ GYH RTE NK+I +G + + + D+
Sbjct: 224 WRVGSLGSRHPPYVTWRVPRAGQTGYHKRTEYNKRILMMG-----------DLTKGDLDL 272
Query: 310 TPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
+P GGF +YG++ Y+L+ G GP KR V +R + + L EI
Sbjct: 273 SPKGGFKNYGILRSQYILLSGSVPGPAKRFVFIRHPIRPSYAELPAPEI 321
>gi|448350181|ref|ZP_21539000.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
gi|445637688|gb|ELY90836.1| 50S ribosomal protein L3P [Natrialba taiwanensis DSM 12281]
Length = 340
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 187/368 (50%), Gaps = 40/368 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD +++ LE+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASADELRGFLEEGR--VDDVRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
SV +VD+ E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 SSVEDRVDYTLELLEDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA----------- 279
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D T GGF +YG V+ ++LIKG GP+KR+V R ++ RL E +++
Sbjct: 280 ----DATVDGGFINYGEVDGPHVLIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRY 332
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 333 VSTASNQG 340
>gi|452206448|ref|YP_007486570.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
gi|452082548|emb|CCQ35806.1| 50S ribosomal protein L3 [Natronomonas moolapensis 8.8.11]
Length = 336
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 187/367 (50%), Gaps = 42/367 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PR RA+ + ++P DD +P L F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSMGFSPRSRAASEVPRFNSWP-DDEGQPG-LQGFAGYKAGMSHVVTINDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+E VT++ETPP+ V V Y TP G R L +W ++E++ R ++
Sbjct: 65 GQEETVPVTVVETPPMRAVAVRAYEDTPYGTRPLTELWTDEVHEDLGRALS---VPDEQS 121
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ + D G +RV+ HT + + +K+ +ME +V G
Sbjct: 122 GGAESQIREALDSGA-------------LADVRVITHTLPSGLSSVPKKEPDVMETRVGG 168
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G++ +++FA+ + + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 169 GALGDRLEFAFDLVDDGGEHAATDVFRAGQYADVAGITKGKGTQGPVKRWGVQKRKGKHA 228
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDLG--------------- 273
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
+ D+TP GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 274 -DDDVTPDGGFVNYGEVDGSYALVKGSVPGPDKRLVRFRPAVRPADQPRLDPE---VRYV 329
Query: 364 DTSSKFG 370
T+S G
Sbjct: 330 STASNQG 336
>gi|190895956|gb|ACE96491.1| casein kinase II regulatory subunit [Populus tremula]
Length = 99
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/99 (94%), Positives = 98/99 (98%)
Query: 162 VLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
VLAHTQIRKMKGLKQKKAHLMEIQVNGG++AQKVDF YGFFEKQ+PIDAVFQKDEMID+I
Sbjct: 1 VLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFGYGFFEKQVPIDAVFQKDEMIDVI 60
Query: 222 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 260
GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP
Sbjct: 61 GVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP 99
>gi|448323163|ref|ZP_21512627.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
gi|445600349|gb|ELY54362.1| 50S ribosomal protein L3P [Natronococcus amylolyticus DSM 10524]
Length = 339
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 185/367 (50%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RAS + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D + +++ LE + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDADTAEDELRELLEDGR--VDDVRVITHTVPSAVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDFA + ++ F+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFALELIADGGEHVMNDTFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR+V R ++ RL E ++F+
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRFV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 338
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 190/363 (52%), Gaps = 33/363 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GS+GF PRKRA+R G+VK++P+ D S R+ F G+KAGMTH++ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETD-SDEVRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E +AVT++E PP+ V+ V GY TP G ++ WA K
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---------------SADKLS 110
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKY-CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
+ + + D A L+K+++ +R++ +Q K+ + K +ME+ +
Sbjct: 111 DVIPSLPRRIPERKEHDANAHLDKLRESDLAEVRLIVSSQPDKVSAVGSKSPEIMEMGLT 170
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
GG + ++D+A +++ I+ VF+ ID+IGVTKG G +GVV R+GV L K +
Sbjct: 171 GGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRFGVKLLSHKNSK 230
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEK 307
R++ +G + V T+ +AGQ GYH RTE NK+I ++ A +E E
Sbjct: 231 RRRQIGNMGDFGTGYVRKTIRQAGQTGYHQRTEYNKRILRI--AGEE-----------ES 277
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
ITP GGF HYG V Y++I+G GP KR++ R + R + + ++ T+S
Sbjct: 278 QITPAGGFLHYGEVKNHYMIIQGSLPGPAKRLIRFRDA---ARPRREQPPVDITYVSTAS 334
Query: 368 KFG 370
K G
Sbjct: 335 KQG 337
>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
gi|42559677|sp|Q975I1.1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
gi|15621424|dbj|BAB65419.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
Length = 343
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 200/377 (53%), Gaps = 41/377 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKRAS +++P ++P +L F+GYK GM+HI
Sbjct: 1 MGHRKLASPRRGSAGVRPRKRASEILPTPRSWPTIQSNEP-KLLGFVGYKVGMSHIFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+KP S + KE V++IETPP++ + + YV P+G + T + ++E++ +
Sbjct: 60 DKPTSPNYGKEIYVPVSVIETPPVIPLAIRAYVMGPKGEPTTLTEYWGDISEDLLKLI-- 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKD-IQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
+++ T+ E GK D I +L + +RVL TQ + + L +KK
Sbjct: 118 -----QQRKVTRLKIDKEKMKGKLDEINNKLNDI----LYLRVLIATQPKLVPSLGKKKP 168
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++E+QV GG + ++++ K + + VF++ ++IDIIGVTKGKG++GVV R+GV
Sbjct: 169 EIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVV 228
Query: 240 RLPR--KTHRGLRKVACIGAWHPARVSFT----VARAGQNGYHHRTEMNKKIYKLGKASQ 293
LPR K +G RKV G SF+ V + GQ GYH RTE NK+I K+
Sbjct: 229 ELPRWHKHRKGSRKVGARGP------SFSTPSYVPQPGQMGYHRRTEYNKRILKISDDPN 282
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
E I P GGF +YG+V YL+I+G +G KKR + LR + + S +
Sbjct: 283 E--------------INPKGGFVNYGIVRNTYLIIEGSIIGAKKRPLFLRYPI--RPSWI 326
Query: 354 ALEEIKLKFIDTSSKFG 370
K+ +++ S+ G
Sbjct: 327 PQSAPKITYVNLYSQQG 343
>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
gi|212288410|sp|A1RVG3.1|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
Length = 342
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 189/371 (50%), Gaps = 45/371 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 8 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVEDRPT 66
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE +AVT+++ PPL + G Y P RS+ VWA L +RR
Sbjct: 67 SPLYGKEVVKAVTVLDAPPLFIWGFRLYTLDPTNGYKRSIAEVWAPELPAYLRRVL---- 122
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
T K D+ Q++K++++ V +R L TQ + G+ +K
Sbjct: 123 ----------------TLPEKVDVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTP 165
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI + G SV +++ FA K + VF +++D+I VTKGKGY+GV+ R+GV
Sbjct: 166 ELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGV 225
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA V FT R GQ G+H RTE NK+I K+G E
Sbjct: 226 TILPRWHKHRKGHRRTGTIGPQAPA-VMFTQPRPGQMGFHQRTEYNKRIIKIGDNGAE-- 282
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
ITP GF HYGVV Y+LI+G G +KR+V LR +
Sbjct: 283 ------------ITPKSGFLHYGVVKGPYILIQGTVPGARKRLVVLRYPVRPPKKAPPAA 330
Query: 357 EIKLKFIDTSS 367
E ++ +I + S
Sbjct: 331 EPQVVWISSQS 341
>gi|354610537|ref|ZP_09028493.1| ribosomal protein L3 [Halobacterium sp. DL1]
gi|353195357|gb|EHB60859.1| ribosomal protein L3 [Halobacterium sp. DL1]
Length = 324
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 177/362 (48%), Gaps = 43/362 (11%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF PRKRA + ++P DD L F GYKAGMTH+V +K S ET
Sbjct: 1 MGFSPRKRAESEVPRFNSWPADDGQ--VGLQGFAGYKAGMTHVVLVDDKANSPSEGMETS 58
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
VT++ETPP+ V Y TP G + L VWA ++E++ R T+
Sbjct: 59 VPVTVVETPPMRAAAVRVYEDTPYGKKPLTEVWADDVHEDLDRALSVPQSGGDTDELTEM 118
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+ + D IRV+ HT + + +K+ +ME +V GGS+ +
Sbjct: 119 LENEDVAD------------------IRVITHTVPGDLSSIPKKEPDIMETRVGGGSLQE 160
Query: 194 KVDFAYGFFEKQI--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--L 249
+ DFA E VF+ E DI GVTKGKG +G V RWGV + K R
Sbjct: 161 RADFAAELLEDGGVHEFGDVFRAGEFTDIAGVTKGKGTQGPVKRWGVQKRKGKHARQGWR 220
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDI 309
R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+ D+
Sbjct: 221 RRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDFGEGD---------------DV 265
Query: 310 TPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFIDTSSK 368
GGFP+YG V+ Y L+KG GP KR+V R ++ ++ RL E ++++ T+S
Sbjct: 266 NAAGGFPNYGEVDGSYTLVKGSVPGPDKRLVRFRPAVRPSESPRLDPE---VRYVSTASN 322
Query: 369 FG 370
G
Sbjct: 323 QG 324
>gi|24645875|ref|NP_731547.1| ribosomal protein L3, isoform D [Drosophila melanogaster]
gi|23170972|gb|AAF54612.2| ribosomal protein L3, isoform D [Drosophila melanogaster]
Length = 161
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 108/126 (85%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKSK 126
NW S+
Sbjct: 121 NWYVSE 126
>gi|448578201|ref|ZP_21643636.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
gi|445726742|gb|ELZ78358.1| 50S ribosomal protein L3P [Haloferax larsenii JCM 13917]
Length = 338
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA++ ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V V Y +T G++ VWA ++E+ R ++ +
Sbjct: 65 GMEEAVPVTVVETPPMRAVAVRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
+A + + E DD +RV+ HT +K + +KK +ME +
Sbjct: 125 DAEALREAVEAGEVDD------------------LRVITHTVPAGLKNVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSLVERADFALELVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+ + +
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPTVD---- 282
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
GGF +YG V+ Y L+KG GP KR++ R ++ RL E +
Sbjct: 283 -----------GGFVNYGEVDGHYALVKGSLPGPNKRLLRFRPAVRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|448463230|ref|ZP_21598008.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
gi|445817225|gb|EMA67101.1| 50S ribosomal protein L3P [Halorubrum kocurii JCM 14978]
Length = 338
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 189/367 (51%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT++ETPP+ V + Y +TP G + + VWA +EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D +++A L++ +RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEED--ADELRALLDE--GAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDF + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ DY LIKG GP KR++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGDYALIKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|448671480|ref|ZP_21687419.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
gi|445766083|gb|EMA17220.1| 50S ribosomal protein L3P [Haloarcula amylolytica JCM 13557]
Length = 338
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 185/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D ++ ++ LE +R++ HT + + +KK +ME +V G
Sbjct: 115 ---DVPEDHDPDAAEEQVRDALEAGD--LGDVRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|379003041|ref|YP_005258713.1| 50S ribosomal protein L3 [Pyrobaculum oguniense TE7]
gi|375158494|gb|AFA38106.1| archaeal ribosomal protein L3 [Pyrobaculum oguniense TE7]
Length = 338
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 182/347 (52%), Gaps = 45/347 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDANLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE +AVT+++ PPL V G Y P LRS VWA L + + R
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL---- 118
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
T K D+ Q++++++Y V +R L TQ + G+ +K
Sbjct: 119 ----------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQ-PHLSGIGKKTP 161
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI + G ++ +++ FA K + VF +++D+I VTKGKG++GVV R+GV
Sbjct: 162 ELLEIPIGGVPNIDERIKFATSLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGV 221
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE-- 278
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
ITP GFPHYGV+ Y+LI+G G +KR+V LR
Sbjct: 279 ------------ITPKSGFPHYGVIKGPYILIQGSMPGARKRLVVLR 313
>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
gi|212288409|sp|A3MWI4.1|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
Length = 338
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 193/368 (52%), Gaps = 39/368 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPT-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE +AVT+++ PPL V V Y P G + ++ W ++RR
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLYVAAVRLYTLDPTNGYKVAVGEAWVSEPPADLRR------ 116
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+K++T+ K ++A LE+ + +RVL TQ R + G+ +K ++
Sbjct: 117 -------VLTLPEKFDTE---KQLKA-LEEYRDVAVDVRVLVATQPR-LSGIGKKTPEVL 164
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI V G S+ ++++FA K + VF +++D+I VTKGKGY+GVV R+GVT L
Sbjct: 165 EIPVGGVPSIDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTIL 224
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
PR K +G R+ IG PA + FT R GQ G+H RTE NK+I K+G E
Sbjct: 225 PRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRILKIGDNGAE----- 278
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
ITP GFPHYGV+ Y+L++G G +KR+V LR + E +
Sbjct: 279 ---------ITPKSGFPHYGVIKGPYILLQGSVPGARKRLVVLRYPVRPPKKAPPAAEPQ 329
Query: 360 LKFIDTSS 367
+ ++ + S
Sbjct: 330 VVWVSSQS 337
>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Methanoregula boonei 6A8]
gi|166233155|sp|A7I5N9.1|RL3_METB6 RecName: Full=50S ribosomal protein L3P
gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
Length = 337
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 181/368 (49%), Gaps = 35/368 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA K K++P+ S L F GYK GMTH++ +
Sbjct: 3 KINRPRRGSLAFSPRKRAQSPIPKYKSWPEH--SGAPALLGFAGYKVGMTHVLMVDDHKD 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S KE VTIIE P + V + Y K G +L +WA+ L+ ++ RR
Sbjct: 61 SPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTEIWAEPLDSQLSRRVTS---- 116
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K Y++ KK L I LA+TQ M G+ +K LMEI
Sbjct: 117 ---------PKNYDSTAAKKKYSDALAA--GLVAEIYALAYTQPATMSGVPKKVPDLMEI 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
+V GG +A++ ++A+G K+I + V + DI +T GKG +G V RWGVT RK
Sbjct: 166 KVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVTLRKRK 225
Query: 245 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
G R V +G W+P V + V ++GQ GY RTE NK+I K+G+ E
Sbjct: 226 HSVGGKERHVGTLGPWNPHHVRWEVPQSGQMGYQQRTEFNKRILKIGENGAE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF +YGV+ Y++IKG GP KR++ +R ++ + + ++F
Sbjct: 278 ------ITPAGGFLNYGVIRNAYVVIKGSIPGPAKRLIRIRPAI--RQGEHVVRSPAIQF 329
Query: 363 IDTSSKFG 370
+ SK G
Sbjct: 330 VSVQSKQG 337
>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
gi|212288408|sp|A4WMH5.1|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
Length = 338
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 182/347 (52%), Gaps = 45/347 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPDVNLGKPA-LLGFAAYKAGMLHAVVVDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE +AVT+++ PPL V G Y P LRS VWA L + + R
Sbjct: 63 SPLYGKEVVKAVTVLDAPPLFVWGFRLYTLDPTNGYLRSAAEVWAGELPKHLSRVL---- 118
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
T K D+ Q++++++Y V +R L TQ + G+ +K
Sbjct: 119 ----------------TLPEKVDVDKQMKQVEEYRDVAVEVRALVATQ-PHLSGIGKKTP 161
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI + G ++ +++ FA K + VF +++D+I VTKGKG++GVV R+GV
Sbjct: 162 ELLEIPIGGVPNIDERIKFAISLLGKTVSPKDVFSPGQLVDVIAVTKGKGWQGVVKRFGV 221
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE-- 278
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
ITP GFPHYGV+ Y+LI+G G +KR+V LR
Sbjct: 279 ------------ITPKSGFPHYGVIKGPYILIQGSLPGARKRLVVLR 313
>gi|336477161|ref|YP_004616302.1| 50S ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
gi|335930542|gb|AEH61083.1| ribosomal protein L3 [Methanosalsum zhilinae DSM 4017]
Length = 337
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 169/344 (49%), Gaps = 33/344 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA H K +++P+ + +L F GYK GMTH++
Sbjct: 3 KGHRPRRGSLAFSPRKRAKSHIAKFRSWPES--AGEPKLQDFAGYKVGMTHVIMIDNVKN 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E TIIETP + V + Y + G + + WA L+E + R N C
Sbjct: 61 SLTEGTEISVPATIIETPAIRVAAIRAYAEDVYGKKPVYEAWASDLDESLSR----NIC- 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K Y T + I +E+ T IRV +T + + G+ +KK LME
Sbjct: 116 --------LPKDYSTQNALDKISGLIEEGN--ATDIRVATYTLPKNITGIPKKKPDLMET 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
++G V K ++A ++ I +F ++D+ +T GKG +G V RWG+ K
Sbjct: 166 SISGNDVRAKFEYASSILGNEVEISDIFDSGNLVDVASITTGKGTQGPVKRWGIQMAKHK 225
Query: 245 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R LR+V +G W PA VS+ V + GQ GYH RTE NK+I K+ + E
Sbjct: 226 HSRAGSLRQVGTLGPWRPAHVSWRVPQMGQMGYHQRTEYNKRILKMSSDADE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ P GGF +YG+V+ Y+L+KG GP KR+V LR+ +
Sbjct: 278 ------VNPDGGFINYGLVSNSYILVKGSIPGPSKRLVRLREPV 315
>gi|336252440|ref|YP_004595547.1| 50S ribosomal protein L3 [Halopiger xanaduensis SH-6]
gi|335336429|gb|AEH35668.1| ribosomal protein L3 [Halopiger xanaduensis SH-6]
Length = 339
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRAS + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDQSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y T G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTAYGKQPVTEVWTDEFVSELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D + +++ LE+ + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDPDAAEDELRGLLEEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G+V ++VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GAVEERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFINYGEVDGPHALIKGSLPGPEQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 358
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 200/370 (54%), Gaps = 27/370 (7%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GS+GF PRKRA R G++ ++P+ + S+ R+ F G+KAGMTH++ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLN--EEVRRRFY------K 120
+E +AVT++E PP+ V+ V GY TP G+++ +WA + + + RF +
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ + +K A K + +G + A +R++ TQ +K + K
Sbjct: 126 DIEEGRKPA--KRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPV 183
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ME+ + GG K+++A+ +I ID V++ + +D++G+TKGKG++GV+ R+GV
Sbjct: 184 IMEVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGKGWQGVIKRFGVKL 243
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L K + R++ +G + V T+ +AGQ GYH RTE+NK+I ++
Sbjct: 244 LSHKNSKRRRQIGNMGDFGTGYVRKTIRQAGQMGYHKRTELNKRILRISNPG-------- 295
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
E D+TP GGF HYG V Y++++G GP KR++ R + T+ + ++ L
Sbjct: 296 -----ESDVTPAGGFLHYGEVTNPYMVLEGSLPGPAKRLLRFRDPVRPHTN---VFDVDL 347
Query: 361 KFIDTSSKFG 370
++ TSSK G
Sbjct: 348 TYVSTSSKQG 357
>gi|448441449|ref|ZP_21589112.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
gi|445688858|gb|ELZ41105.1| 50S ribosomal protein L3P [Halorubrum saccharovorum DSM 1137]
Length = 338
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 188/367 (51%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y +TP G + + VWA +EE+ R
Sbjct: 65 GMEESVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D +++A L++ +RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEED--ADELRALLDE--DAVDDVRVITHTVPSELSNVPKKKPDIMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDF + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ DY LIKG GP KR++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGDYALIKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|222480857|ref|YP_002567094.1| 50S ribosomal protein L3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
Length = 338
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 189/367 (51%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT++ETPP+ V + Y +TP G + + VWA +EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D +++A L++ +RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEED--ADELRALLDE--GAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDF + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP KR++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDKRLIRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
Length = 338
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 184/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA+ + ++P DD +P + F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP GLR L VW +E++ R
Sbjct: 65 GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ + D + I+ L+ + +R++ HT + + + K +ME +V G
Sbjct: 115 ---DLPAEQDRDGAEAQIRDALDAGR--LGDVRLITHTVPGDLPSVPKNKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+A +++ + + VF+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSLADRLEHGLELVADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGD-------------- 275
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
E D+TP GGF +YG V +Y LIKG GP R+V LR ++ RL E ++++
Sbjct: 276 -EDDVTPDGGFVNYGEVEGNYALIKGSIPGPDSRLVRLRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|448311980|ref|ZP_21501733.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603601|gb|ELY57563.1| 50S ribosomal protein L3P [Natronolimnobius innermongolicus JCM
12255]
Length = 339
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 189/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWP-DDEGQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVSLRAYEDTPYGKQPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ + +++++ L + + +RV+ HT + + +KK +ME +V G
Sbjct: 113 TLDLPGDDYDAEAAEEELRNLLAEGR--IDDVRVITHTVPGSVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVGERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R++ R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPEQRLIRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|448592779|ref|ZP_21651826.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
gi|445730805|gb|ELZ82392.1| 50S ribosomal protein L3P [Haloferax elongans ATCC BAA-1513]
Length = 338
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 191/370 (51%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA++ ++K++P DD S L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSMGFSPRKRATKEVPRIKSWPSDDGS--PALQGFAGYKAGMTHVMMVNDEADSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ + + Y +T G++ VWA ++E+ R ++ +
Sbjct: 65 GMEEAVPVTVVETPPMRAIALRAYEQTSYGMKPKTEVWASEFHDELDRVLDLPAEDTFEE 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
+A + + E DD +RV+ HT +K + +KK +ME +
Sbjct: 125 DAEALREAVEAGEVDD------------------LRVITHTVPAGLKNVPKKKPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++ DFA + + + VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSLVERADFALELVGEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG+ + +
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDEPTVD---- 282
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
GGF +YG V+ Y L+KG GP KR++ R ++ RL E +
Sbjct: 283 -----------GGFVNYGEVDGHYALVKGSLPGPNKRLLRFRPAVRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|448630850|ref|ZP_21673305.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
gi|445755224|gb|EMA06614.1| 50S ribosomal protein L3P [Haloarcula vallismortis ATCC 29715]
Length = 338
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +RV+ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRVITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGSYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|448399310|ref|ZP_21570612.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
gi|445669217|gb|ELZ21830.1| 50S ribosomal protein L3P [Haloterrigena limicola JCM 13563]
Length = 339
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 188/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ L VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVSLRAYEDTPYGMKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A T + ++G+ D +RV+ HT ++ + +KK +ME +V G
Sbjct: 125 AATDELRGLH-EEGRVDD-------------VRVITHTVPSEVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDFA E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFALELLEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP+KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|448329359|ref|ZP_21518659.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
gi|445614098|gb|ELY67779.1| 50S ribosomal protein L3P [Natrinema versiforme JCM 10478]
Length = 339
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 188/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGMKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD + +++ LE+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDASEDELRGLLEEGR--VDDVRVITHTVPGDVPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +V+FA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDDRVEFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|433638933|ref|YP_007284693.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
gi|433290737|gb|AGB16560.1| archaeal ribosomal protein L3 [Halovivax ruber XH-70]
Length = 340
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 187/372 (50%), Gaps = 48/372 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + +++P DD +P L F GYKAGMTH+V + S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF----YKNWCK 124
ET VTI+ETPP+ + + Y ++P G + + VWA L++E+ R
Sbjct: 65 GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
+ FT + DD +R + +T +++ + + K +ME
Sbjct: 125 AAADEFTAALEAGRVDD------------------VRAITYTTPDEIQSVPKTKPDVMET 166
Query: 185 QVNGGSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
++ GGSV +V+F E + ++ VF+ E +D GVTKGKG +G V RWGV +
Sbjct: 167 RIGGGSVDDRVEFGLDLLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKR 226
Query: 242 PRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 227 KGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGA------- 279
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEI 358
D T GGF +YG V+ + LIKG GP +R++ R ++ RL E
Sbjct: 280 --------DATVDGGFVNYGEVDGPHALIKGSLPGPSQRLIRFRPAIRPGDQPRLDPE-- 329
Query: 359 KLKFIDTSSKFG 370
++F+ T+S G
Sbjct: 330 -VRFVSTASNQG 340
>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
Length = 338
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +R++ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVPFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|448460077|ref|ZP_21596997.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
gi|445807795|gb|EMA57876.1| 50S ribosomal protein L3P [Halorubrum lipolyticum DSM 21995]
Length = 338
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 189/367 (51%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT++ETPP+ V + Y +TP G + + VWA +EE+ R
Sbjct: 65 GMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D +++A L++ +RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEED--ADELRALLDE--GAVDDVRVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDF + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP KR++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT]
gi|121693633|sp|A0B9X0.1|RL3_METTP RecName: Full=50S ribosomal protein L3P
gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT]
Length = 335
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 195/364 (53%), Gaps = 38/364 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL F PRKRA +++++ D+ + + F GYKAGMTH++ ++P S
Sbjct: 7 PRRGSLAFSPRKRAKSEVPRIRSWVADERAG---MAGFAGYKAGMTHVIMIDDRPRSLTE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++E PP+ V + Y G+R +WA++L++++ R
Sbjct: 64 GMEISVPVTVVEVPPMSVAALRVYEPYNGGIRPAGELWAENLSQDLER------------ 111
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A T K +DI+++++++ C IRVLAHT R + G+ +K +MEI V G
Sbjct: 112 AIT--IPKARRGASLEDIESRVDEL---CE-IRVLAHTNPRLLTGVPKKVPDIMEIPVTG 165
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
SV +++ A G Q+ + +F E ID+ VTKGKG +G V RWG+ RK R
Sbjct: 166 RSVEEQLKAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRT 225
Query: 249 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
LR V +G WHPAR+S+ V + GQ GYH RTE NK+I +G
Sbjct: 226 GKLRHVGNLGPWHPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNGT------------- 272
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
DITP GGF YGVV +Y+LIKG GP KR+V +R++ ++ + A + ++ ++
Sbjct: 273 -DITPDGGFVGYGVVRNEYMLIKGSVPGPVKRLVRMRRA-IRPGAAFAPKAPQILYVSKE 330
Query: 367 SKFG 370
SK G
Sbjct: 331 SKQG 334
>gi|448377806|ref|ZP_21560502.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
gi|445655750|gb|ELZ08595.1| 50S ribosomal protein L3P [Halovivax asiaticus JCM 14624]
Length = 340
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 191/369 (51%), Gaps = 42/369 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + +++P DD +P L F GYKAGMTH+V + S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFRSWPDDD-GQPT-LQGFAGYKAGMTHVVTVDDAANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-YKNWCKSKK 127
ET VTI+ETPP+ + + Y ++P G + + VWA L++E+ R +
Sbjct: 65 GMETTVPVTIVETPPMAIAALRAYEESPYGQQPVAEVWADELDDELERTLDLPGDDYDRD 124
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
A ++T D+G+ D +R + +T +++ + + K +ME ++
Sbjct: 125 AAADEFTAAL--DEGRVDD-------------VRAITYTTPGEIQSVPKTKPDVMETRIG 169
Query: 188 GGSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
GGSV +V+F E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 170 GGSVDDRVEFGLDLLEADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGK 229
Query: 245 THRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 230 HARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLLAIGDGA---------- 279
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLK 361
D T GGF +YG V+ + LIKG GP +R++ R ++ RL E ++
Sbjct: 280 -----DATVDGGFVNYGEVDGPHALIKGSLPGPSQRLIRFRPAIRPGDQPRLDPE---VR 331
Query: 362 FIDTSSKFG 370
F+ T+S G
Sbjct: 332 FVSTASNQG 340
>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Pyrobaculum neutrophilum V24Sta]
gi|212288414|sp|B1YD88.1|RL3_THENV RecName: Full=50S ribosomal protein L3P
gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Pyrobaculum neutrophilum V24Sta]
Length = 338
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 179/347 (51%), Gaps = 45/347 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P+ + KP L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPA-LLGFAAYKAGMLHAVVVEDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE VT+++ PPL + G Y P RS+ VWA L +RR
Sbjct: 63 SPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSIAEVWAPELPAYIRRVL---- 118
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
T K D+ Q++K++++ V +R L TQ + G+ +K
Sbjct: 119 ----------------TLPEKADVDKQMKKVEEFKDVAVDVRALVATQ-PHLSGIGKKTP 161
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI + G SV +++ FA K + VF +++D+I VTKGKGY+GV+ R+GV
Sbjct: 162 ELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGV 221
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRVVKIGDNGAE-- 278
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
ITP GF HYGV+ Y+LI+G G KKR+V LR
Sbjct: 279 ------------ITPKSGFLHYGVIRGPYILIQGTVPGAKKRLVVLR 313
>gi|320542629|ref|NP_731550.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
gi|318068758|gb|AAF54611.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
Length = 138
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/125 (71%), Positives = 107/125 (85%), Gaps = 1/125 (0%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKF PRHGS+ F P+KR++RHRGKVKAFPKDD SKP LT F+GYKAGMTHIVR+
Sbjct: 1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREA 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE EAVT++ETPP++VVG VGY++TP GLR+L VWAQHL+EE RRRFYK
Sbjct: 61 DRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYK 120
Query: 121 NWCKS 125
N C S
Sbjct: 121 N-CSS 124
>gi|448685260|ref|ZP_21693252.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
gi|445781871|gb|EMA32722.1| 50S ribosomal protein L3P [Haloarcula japonica DSM 6131]
Length = 338
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +R++ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
Length = 337
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 184/364 (50%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K ++P + +P + GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPSYN-GEPA-FQGYAGYKVGMTHVIMIDDHKNSPSE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KE VT+IE PP+ V+ + Y G ++ VW+++++E + R
Sbjct: 65 GKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAEVWSENIDESISR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
T+ KK+ ++ K+ I +E + T I + +TQ ++ G+ +K LMEI++ G
Sbjct: 113 -ATQIPKKHNAEEQKEKILKGIED--GFVTDIFAIMYTQPEQLTGVPKKVPELMEIRIAG 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G ++ ++DF +++ I+ V + ID+ VT GKG +G V RWG+ RK RG
Sbjct: 170 GDLSTRLDFGISKLGEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQVRKRKHSRG 229
Query: 249 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+K + +G W P V + V + GQ GY RTE NK+I ++G +E
Sbjct: 230 KKKRHIGNLGPWTPHHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
I P GGF HYG+V Y+LIKG GP KR++ +R ++ + E + F+ T
Sbjct: 278 --INPDGGFLHYGLVRGKYVLIKGSIPGPTKRLIRIRPAI--RQGEHVFREPSINFVSTM 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
gi|344212413|ref|YP_004796733.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
gi|448636987|ref|ZP_21675435.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
gi|57015335|sp|P20279.5|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
AltName: Full=Hmal3
gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-hpmn And Cca-phe-cap-bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596375|pdb|3CD6|B Chain B, Co-cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc-puromycin
gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|374977943|pdb|4ADX|B Chain B, The Cryo-Em Structure Of The Archaeal 50s Ribosomal
Subunit In Complex With Initiation Factor 6
gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
gi|343783768|gb|AEM57745.1| 50S ribosomal protein L3P [Haloarcula hispanica ATCC 33960]
gi|445765293|gb|EMA16432.1| 50S ribosomal protein L3P [Haloarcula sinaiiensis ATCC 33800]
Length = 338
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +R++ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|352682917|ref|YP_004893441.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
gi|350275716|emb|CCC82363.1| 50S ribosomal protein L3p [Thermoproteus tenax Kra 1]
Length = 339
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/347 (35%), Positives = 179/347 (51%), Gaps = 38/347 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRAS +V+ +P KP L F YK GM H V +K
Sbjct: 4 KIHRPRRGSMGVYPRKRASDIVPRVRTWPDPQLGKPS-LLGFAAYKVGMIHAVLVEDKQT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
S L KE +A T++E PPL ++ + Y P G R S+ VW + +V R
Sbjct: 63 SPLFGKEIVKAATVLEAPPLKILAIRLYSLDPTNGYRKSIGEVWTPEIPRDVAR------ 116
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
K Y +D K L+++K +R L TQ R + G+ +K L+
Sbjct: 117 ------VVKTLPKSYNLEDRLK----LLDQLKPAAVEVRALVSTQPR-LAGIGKKTPELL 165
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI + G S+ +++ + K++ I VF + ++ID+IG+TKGKG++GV+ R+GVT L
Sbjct: 166 EIPIGGVASIDERIKYGLEILGKEVKIADVFSEGKLIDVIGITKGKGWQGVIKRFGVTIL 225
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
PR K +G R+ IG PA + FT R GQ G+H R+E NK+I K+G E
Sbjct: 226 PRWHKHRKGHRRTGTIGPQSPA-LMFTQPRPGQMGFHQRSEYNKRILKIGSNPAE----- 279
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
I P GG+PHYG+V DY+++ G GP KR++ LR +
Sbjct: 280 ---------INPRGGWPHYGLVKTDYVILAGSVQGPPKRLIVLRHPV 317
>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219000|pdb|1KD1|D Chain D, Co-crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312235|pdb|3G71|B Chain B, Co-crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
gi|392311507|pdb|3OW2|B Chain B, Crystal Structure Of Enhanced Macrolide Bound To 50s
Ribosomal Subunit
Length = 337
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 185/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 113
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 114 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 168
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 169 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 228
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 281
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 282 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 330
Query: 364 DTSSKFG 370
S G
Sbjct: 331 SNESNQG 337
>gi|448648021|ref|ZP_21679499.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
gi|445775891|gb|EMA26886.1| 50S ribosomal protein L3P [Haloarcula californiae ATCC 33799]
Length = 338
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 180/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +R++ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDLVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|335437513|ref|ZP_08560289.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
gi|334895861|gb|EGM34024.1| 50S ribosomal protein L3P [Halorhabdus tiamatea SARL4B]
Length = 338
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 183/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA+ + ++P DD +P + F GYKAGM+H+V ++P S
Sbjct: 7 PRKGSLGYGPRTRATSETPRFNSWP-DDEGQPG-VQGFAGYKAGMSHVVVINDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP GLR L VW +E++ R
Sbjct: 65 GMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTEVWTDEFHEDLDRAI---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ + D + I+ L+ + +R++ HT + + + K +ME +V G
Sbjct: 115 ---DLPAEQDRDGAEAQIRDALDAGR--LGDVRLITHTVPGDLPSVPKNKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+A +++ + + VF+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSLADRLEHGLELVADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGD-------------- 275
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
E D+TP GGF +YG V Y LIKG GP R+V LR ++ RL E ++++
Sbjct: 276 -EDDVTPEGGFVNYGEVEGHYALIKGSLPGPDGRLVRLRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|448681421|ref|ZP_21691554.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
gi|445767954|gb|EMA19047.1| 50S ribosomal protein L3P [Haloarcula argentinensis DSM 12282]
Length = 338
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 7 PRKGSMGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHDPDA 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + +E D +R++ HT + + +KK +ME +V G
Sbjct: 125 AEEQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 170 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 282
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
GGF +YG V+ Y L+KG GP KR+V R ++ RL E ++++
Sbjct: 283 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
S G
Sbjct: 332 SNESNQG 338
>gi|448386089|ref|ZP_21564297.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
gi|445655987|gb|ELZ08829.1| 50S ribosomal protein L3P [Haloterrigena thermotolerans DSM 11522]
Length = 339
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 188/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D + +++ L + + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLSEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|332796528|ref|YP_004458028.1| 50S ribosomal protein L3 [Acidianus hospitalis W1]
gi|332694263|gb|AEE93730.1| ribosomal protein L3 [Acidianus hospitalis W1]
Length = 361
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 194/374 (51%), Gaps = 39/374 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
+ HRK PR GS GF PRKRA +++P+ S P L F+GYK GMTH+
Sbjct: 23 LGHRKLASPRRGSSGFRPRKRAEELLPTPRSWPRISSSNPI-LLGFVGYKVGMTHVYYIN 81
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWAQHLNEEVRRRFY 119
+ GS + KE VT+IETPP++ + + Y+ +G + T W L +E+ R+
Sbjct: 82 DIKGSSEYGKEVFTPVTVIETPPIIPIALRAYILGSKGEPEVLTDYWTPELPQEITRKIK 141
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
K K ++ K I++ L + +R + TQ + + L +KK
Sbjct: 142 S--LKVNKDKLNEFLDK---------IKSNLNNI----LYLRAIIATQPKLVPALGKKKP 186
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++EIQV GG + ++++ K + + +F++ +++DIIGVTKGKG++GV+ R+ V
Sbjct: 187 EIVEIQVGGGDTSAQLNYLLDILGKPVNVTDIFKEGQLVDIIGVTKGKGFQGVIKRYSVM 246
Query: 240 RLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESH 296
LPR K +G RKV G P+ + + V + GQ G+H RTE NK+I K+ QE
Sbjct: 247 ELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQLGFHRRTEYNKRILKISTNPQE-- 301
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
I P GGF YG+V Y+LI+G +G +KR + LR + + + E
Sbjct: 302 ------------INPAGGFVKYGLVKNPYILIQGSTIGVRKRPLFLRYPI--RPYEVPAE 347
Query: 357 EIKLKFIDTSSKFG 370
K+ +ID SSK G
Sbjct: 348 APKITYIDLSSKQG 361
>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 337
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 187/366 (51%), Gaps = 38/366 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT+IETPP+ V + Y TP G R L VW + E+ R
Sbjct: 64 GMETV-PVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTL---------- 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D ++ I+ E +R++ HT + + +KK +ME +V G
Sbjct: 113 ---DVPEDHDPDAAEEQIRDAHEAGD--LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 167
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 168 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 227
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 228 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 280
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
GGF +YG V+ Y L+KG GP KR+V + ++ + L+ +++++
Sbjct: 281 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVPFFRPAVRPNDQPRLDP-EVRYVS 331
Query: 365 TSSKFG 370
S G
Sbjct: 332 NESNQG 337
>gi|448369939|ref|ZP_21556392.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
gi|445650379|gb|ELZ03303.1| 50S ribosomal protein L3P [Natrialba aegyptia DSM 13077]
Length = 340
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 186/368 (50%), Gaps = 40/368 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDRVLDLPGDDYDTD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + + ++G+ D +RV+ HT + + +KK +ME +V G
Sbjct: 125 AAADELRGF-LEEGRVDD-------------VRVITHTVPGDIPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GSV +VD+A E + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDYALELLEDGGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA----------- 279
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D T GGF +YG V+ ++LIKG GP+KR+V R ++ RL E +++
Sbjct: 280 ----DATVDGGFINYGEVDGPHVLIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRY 332
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 333 VSTASNQG 340
>gi|435848748|ref|YP_007310998.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
gi|433675016|gb|AGB39208.1| LSU ribosomal protein L3P [Natronococcus occultus SP4]
Length = 339
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 184/367 (50%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RAS + ++P DD +P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDEANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTGEFVPELDRVLDLPGDDYDAD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + Y +DG+ +RV+ HT ++ + +KK +ME +V G
Sbjct: 125 AAEDELRGY-LEDGR-------------IADVRVITHTVPSEVPSIPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDFALELLADGGEHVMNDVFRAGEYLDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR++ R ++ RL E ++F+
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPDKRLLRFRPAIRPGDQPRLDPE---VRFV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. Large Subunit. The Coordinates For The Small
Subunit Are In The Pdb Entry 1yl4.
gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400
gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400.
gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
Ribosome In Complex With Trnas And Mrna With A Stop
Codon In The A-Site. This File Contains The 50s Subunit
From A Crystal Structure Of The Ribosome In Complex With
Trnas And Mrna With A Stop Codon In The A-Site And Is
Described In Remark 400
Length = 338
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 182/366 (49%), Gaps = 37/366 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKR++ + ++P DD +P + F GYKAGMTH+V ++P S
Sbjct: 6 PRKGSLGFGPRKRSTSETPRFNSWPSDD-GQPG-VQGFAGYKAGMTHVVLVNDEPNSPRE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETPP+ V + Y TP G R L VW + E+ R +
Sbjct: 64 GMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLSDRLDHALDI 123
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ +E D +R++ HT + + +KK +ME +V G
Sbjct: 124 VEDQIRDAHEAGD---------------LGDLRLITHTVPDAVPSVPKKKPDVMETRVGG 168
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K
Sbjct: 169 GSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHA 228
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + +
Sbjct: 229 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTVD------- 281
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
GGF +YG V+ Y L+KG GP KR+V + ++ + L+ +++++
Sbjct: 282 --------GGFVNYGEVDGPYTLVKGSVPGPDKRLVPFFRPAVRPNDQPRLDP-EVRYVS 332
Query: 365 TSSKFG 370
S G
Sbjct: 333 NESNQG 338
>gi|433590194|ref|YP_007279690.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
gi|448332400|ref|ZP_21521644.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
gi|433304974|gb|AGB30786.1| archaeal ribosomal protein L3 [Natrinema pellirubrum DSM 15624]
gi|445627504|gb|ELY80828.1| 50S ribosomal protein L3P [Natrinema pellirubrum DSM 15624]
Length = 339
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 188/367 (51%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRA+ + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRATSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPITEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+ D + +++ L + + +RV+ HT ++ + +KK +ME +V G
Sbjct: 113 VLDIPGDDYDVDAAEDELRGLLAEGR--VDDVRVITHTVPTEIPSVPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSIEERVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGEGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP++R+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPQQRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens]
Length = 188
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 129/178 (72%), Gaps = 6/178 (3%)
Query: 217 MIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYH 276
MIDIIGVTKGKGY+GV + W +LP KTHRGL KVA IGAWHP V+F++A AGQ G H
Sbjct: 1 MIDIIGVTKGKGYKGVTSCWHTKKLPHKTHRGLCKVAWIGAWHPDHVAFSMACAGQKGDH 60
Query: 277 HRTEMNKKIYKL--GKASQES----HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKG 330
H TE+NKKI K+ G +++S ++A T++D ++K I +GGF HYG V + +++KG
Sbjct: 61 HHTEINKKICKIDQGYLTEDSKPIKNNASTDYDLSDKSIDLLGGFVHYGEVTNNSVMLKG 120
Query: 331 CCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
C VG KKRV+ L SLL QT R ALE+ LKF DT+SKFG+GRFQT +EK + G L+
Sbjct: 121 CVVGTKKRVLILCTSLLVQTRRWALEKTDLKFTDTTSKFGYGRFQTMEEKKAFMGPLE 178
>gi|448475310|ref|ZP_21603028.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
gi|445816781|gb|EMA66668.1| 50S ribosomal protein L3P [Halorubrum aidingense JCM 13560]
Length = 338
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 187/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA R +++++P DD P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGYGPRTRADREVPRIRSWPDDD-GAPA-LQGFAGYKAGMTHVVMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y +TP G++ + VWA +EE+ R
Sbjct: 65 GMEESVPVTVVETPPMYAVALRAYEQTPYGMKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D ++++A L+ RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEED--AEELRALLDDDVVDDV--RVITHTVPSELANVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS ++VDF + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSFEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP KR++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T+S G
Sbjct: 332 STASNQG 338
>gi|448415419|ref|ZP_21578219.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
gi|445681077|gb|ELZ33518.1| 50S ribosomal protein L3P [Halosarcina pallida JCM 14848]
Length = 338
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 183/370 (49%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+G+ PR RA++ ++K++P DD S L F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGYGPRTRATKEVPRIKSWPDDDGS--PALQGFAGYKAGMTQVMMVNDESNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V + Y TP G + L VWA +E + R ++
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGTKPLTEVWASEFDENLDRALDLPSEDTFDD 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
+ E DD +RV+ HT MK + +KK +ME +
Sbjct: 125 DADDLRSALEAGEVDD------------------VRVITHTVPAGMKNIPKKKPDIMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ +VDFA + + + VF+ E +D+ GVTKGKG +G V RWGV +
Sbjct: 167 VGGGSLDDRVDFALDLVGEGGEHAMSDVFRAGEYMDVAGVTKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G + S
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQLGQTGYHQRTELNKRLVDIGDGDEASVD---- 282
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
GG+ YG V+ + L+KG GP KR++ R ++ RL E +
Sbjct: 283 -----------GGYVGYGEVDGPHALVKGSLPGPDKRLLRFRPAIRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+F+ T+S G
Sbjct: 329 RFVSTASNQG 338
>gi|448352597|ref|ZP_21541379.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
gi|445642159|gb|ELY95229.1| 50S ribosomal protein L3P [Natrialba hulunbeirensis JCM 10989]
Length = 340
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 190/368 (51%), Gaps = 40/368 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RAS + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD +++ LE+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDAAADELRGLLEEGR--VDDVRVITHTVPGDVPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GSV ++VD+A E+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDYALELVEEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA----------- 279
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D T GGF +YG V+ ++LIKG GP KR+V R ++ RL E +++
Sbjct: 280 ----DATVDGGFVNYGEVDGPHVLIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRY 332
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 333 VSTASNQG 340
>gi|289579898|ref|YP_003478364.1| 50S ribosomal protein L3 [Natrialba magadii ATCC 43099]
gi|448281138|ref|ZP_21472446.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
gi|448358804|ref|ZP_21547478.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
gi|445579462|gb|ELY33856.1| 50S ribosomal protein L3P [Natrialba magadii ATCC 43099]
gi|445644484|gb|ELY97497.1| 50S ribosomal protein L3P [Natrialba chahannaoensis JCM 10990]
Length = 340
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 190/368 (51%), Gaps = 40/368 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RAS + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKSNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGKQPVTEVWTDEFVPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y+TD +++ LE+ + +RV+ HT + + +KK +ME +V G
Sbjct: 113 VLDLPGDDYDTDAAADELRGLLEEGR--VDDVRVITHTVPGDVPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK---QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GSV ++VD+A E+ + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERVDYALELVEEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKH 230
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA----------- 279
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D T GGF +YG V+ ++LIKG GP KR+V R ++ RL E +++
Sbjct: 280 ----DATVDGGFVNYGEVDGPHVLIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRY 332
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 333 VSTASNQG 340
>gi|448315112|ref|ZP_21504765.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
gi|445612371|gb|ELY66097.1| 50S ribosomal protein L3P [Natronococcus jeotgali DSM 18795]
Length = 339
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 184/367 (50%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RAS + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRASSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G + L VW E+ R
Sbjct: 65 GMEETVPVTIVETPPMRAVALRAYEDTPYGKKPLTEVWTDEFVPELDRVLDLPGDDYDAD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + Y +DG+ +RV+ HT ++ + +KK +ME +V G
Sbjct: 125 AAEDELRGY-LEDGR-------------IADVRVITHTVPSEVPSIPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++++FA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEERLEFALEVLADGGEHVLNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR++ R ++ RL E ++F+
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPDKRLLRFRPAIRPGDQPRLDPE---VRFV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c]
gi|254803682|sp|B8GKD3.1|RL3_METPE RecName: Full=50S ribosomal protein L3P
gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c]
Length = 337
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 179/364 (49%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K ++P D +P L +F GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYHSWPARD-GEPI-LQSFAGYKVGMTHVIMVDDHKNSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
K+ VTIIE PP+ V + Y G R+L VW + L+ + RR
Sbjct: 65 GKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEVWTEQLSTLLGRRI---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
KKY + G K + + T + L +TQ + G+ +K LME+ + G
Sbjct: 115 ---TLPKKYSEEAGFKALSEAVAA--GTVTELHALMYTQPDTLTGVPKKVPELMEVCIGG 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G++ QKV+FA ++ + V E D+ +T GKG +G V RWG+ RK RG
Sbjct: 170 GTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIMLRKRKHSRG 229
Query: 249 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+K + +G W+P V + V + GQ GY RT+ NK+I K+G+
Sbjct: 230 GKKRHIGNLGPWNPHHVRWQVPQMGQMGYQQRTDFNKRILKIGENG-------------- 275
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
DITP GGF HYG++ Y++IKG GP KR++ +R ++ K + I +F+ T
Sbjct: 276 TDITPAGGFLHYGLLRNPYVMIKGSVPGPVKRLIRIRPAVRKGEHHARVPAI--EFVSTQ 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|409731024|ref|ZP_11272574.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
gi|448724782|ref|ZP_21707287.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
gi|445784991|gb|EMA35787.1| 50S ribosomal protein L3P [Halococcus hamelinensis 100A6]
Length = 336
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 182/369 (49%), Gaps = 45/369 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+G+ PRKRAS + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSMGYSPRKRASSEVARFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y +TP GLR L W + ++ R
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHADLDRAL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKK-YCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
+ DG+ D +A E ++ + IR + HT M + +KK +ME ++
Sbjct: 115 ---------DVPDGESDPEAFEEAVQDGDVSEIRAITHTVPGGMANIPKKKPDVMETRIG 165
Query: 188 GGSVAQKVDFAYGFFE--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GG V ++V+F + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 166 GGDVTERVEFGLDLIAGGGEHNMTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKH 225
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G
Sbjct: 226 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQMGYHQRTELNKRLVSVGDGD----------- 274
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKF 362
D + GGF YG V+ Y L+KG GP +R+V R ++ RL E +++
Sbjct: 275 ----DASAEGGFVGYGEVDGPYALVKGSLPGPDQRLVRFRPAIRPGDQPRLDPE---VRY 327
Query: 363 IDTSSKFGH 371
+ T+S G
Sbjct: 328 VSTASNQGQ 336
>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
gi|121685298|sp|Q0W1Y9.1|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [Methanocella arvoryzae MRE50]
Length = 337
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 41/367 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GSLG+ PR RA + K++ + + D P ++ F+G+KAGM+HIV ++P S
Sbjct: 7 PRRGSLGYSPRVRARSQKPKMRNWAELGDQP----KIQGFVGFKAGMSHIVMVDDRPHSA 62
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
E VTI+E P + V G+ Y +P G + + W L
Sbjct: 63 TEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLK--------------M 108
Query: 127 KKAFTKYTKK-YETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
++ T K Y+TD+ I A+L K K +RV+ T ++ G+ +K LME +
Sbjct: 109 LESLTHLPKNGYKTDEQLAKI-AELVK-KGVVADLRVMTVTLTSEVSGIPKKVPELMENR 166
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
+ GG +A++ +FA K + I VF E++D+ +TKG G +G V RWG+ RK
Sbjct: 167 IAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGIATQKRKH 226
Query: 246 HRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R +K V +G W+P R+ + V + GQ GYH RTE NK+I K+G ++E
Sbjct: 227 ARTGKKRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEE--------- 277
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
ITP GGF HYG++ DY+++KG GP KR+V +R ++ + + + ++ ++
Sbjct: 278 -----ITPAGGFLHYGLIRNDYIMLKGSIPGPVKRMVRIRPAV--RPKNMPKQAPEITYL 330
Query: 364 DTSSKFG 370
T SK G
Sbjct: 331 STQSKMG 337
>gi|448298465|ref|ZP_21488494.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
gi|445591661|gb|ELY45862.1| 50S ribosomal protein L3P [Natronorubrum tibetense GA33]
Length = 339
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 184/367 (50%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR+RA+ + ++P DD +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRQRATSEVPRFNSWPDDD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G++ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEATPYGMKPVTEVWTDEFVTELDRVLDVPGDDYDAD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A + Y ++G+ D +RV+ HT + + +KK +ME +V G
Sbjct: 125 AAEDELRGY-LEEGRVDD-------------VRVITHTVPGSIPSMPKKKPDVMETRVGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV +VDFA + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVEDRVDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPNKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
gi|259709736|sp|C3N5S7.1|RL3_SULIA RecName: Full=50S ribosomal protein L3P
gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/380 (33%), Positives = 202/380 (53%), Gaps = 39/380 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
+ P S + KE VT++E PP++ + + Y +G ++ T W+ Q L+ R
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
R + ++ K SKKK K+ K + I++ L+++ R+L TQ RK+
Sbjct: 120 IRSFSSFLKNDESKKKFEEKFGSKLDL------IKSNLDRI----VYFRLLVATQPRKIP 169
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV
Sbjct: 170 SLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGV 229
Query: 233 VTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G
Sbjct: 230 IKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD 287
Query: 291 ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQT 350
K+I P GGF YG+V Y+L++G +G KKR + LR+++ +
Sbjct: 288 --------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV--RP 331
Query: 351 SRLALEEIKLKFIDTSSKFG 370
S + K+ +++ SK G
Sbjct: 332 SYVFENAPKITYVNLLSKQG 351
>gi|374325726|ref|YP_005083926.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
gi|356640995|gb|AET31674.1| 50S ribosomal protein L3P [Pyrobaculum sp. 1860]
Length = 338
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 189/371 (50%), Gaps = 45/371 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRA+ +V+ +P + +P L F YKAGM H V ++P
Sbjct: 4 KINRPRRGSMGVYPRKRAADIVPRVRNWPDVNLGRPT-LLGFAAYKAGMVHAVVVDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG--LRSLCTVWAQHLNEEVRRRFYKNW 122
S L+ KE AVT+++ PPL V GV Y P R++ VW+ L
Sbjct: 63 SPLYGKEVVRAVTVLDAPPLYVWGVRLYTLDPANGYRRAVAEVWSAEL------------ 110
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV---IRVLAHTQIRKMKGLKQKKA 179
KY + T K D++ Q++K++++ V +R L Q + G+ +K
Sbjct: 111 --------PKYLHRVLTLPEKVDVEKQMKKLEEFRDVAVDVRALVAMQ-PHLSGIGKKTP 161
Query: 180 HLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV 238
L+EI V G S+ +++ +A K + VF +++D+I VTKGKGY+GVV R+GV
Sbjct: 162 ELLEIPVGGVPSIDERIKYAVSLLGKTVSPKDVFTAGQLVDVIAVTKGKGYQGVVKRFGV 221
Query: 239 TRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESH 296
T LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G+ E
Sbjct: 222 TILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRLLKIGENGAE-- 278
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
ITP GF HYGVV Y+L++G G +KR+V LR +
Sbjct: 279 ------------ITPKSGFLHYGVVKGPYILVQGSVPGARKRLVVLRYPVRPPRKAPPAA 326
Query: 357 EIKLKFIDTSS 367
E ++ ++ + S
Sbjct: 327 EPQVVWVSSQS 337
>gi|386001185|ref|YP_005919484.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
gi|357209241|gb|AET63861.1| 50S ribosomal protein L3P [Methanosaeta harundinacea 6Ac]
Length = 297
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 34/318 (10%)
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSL 102
+ F GYKAGMTHI+ +KP S E VTI+ETPPL + + Y K G+R+
Sbjct: 1 MDGFAGYKAGMTHIIMIDDKPNSLTEGMEISVPVTILETPPLSIAALRVYEKYNGGVRAA 60
Query: 103 CTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRV 162
W+ L+ + R K+K+ A +I A +E M++ +R+
Sbjct: 61 GEAWSDKLDPSLARSI--TVPKNKRGAAID------------EIGAIIEDMEE----LRL 102
Query: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIG 222
+AHT + + G+ +K LMEIQVNGG++A + + A +PI ++F +ID+
Sbjct: 103 IAHTNPKLLTGVPKKNPDLMEIQVNGGNIANQFELAKSLLGSSVPISSIFSPGSIIDVSA 162
Query: 223 VTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTE 280
+TKGKG +G V RWG+ RK RG R + +G W+P V +TV GQ GYH RTE
Sbjct: 163 ITKGKGVQGPVKRWGINLQKRKHSRGGKRRHIGNLGPWNPHHVRWTVPLLGQMGYHQRTE 222
Query: 281 MNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVV 340
NK++ +G ITP GGFP YG++ +Y ++ G GP KR+V
Sbjct: 223 FNKRVLAIGSDGGA--------------ITPDGGFPGYGIIRGEYAILSGSVPGPSKRLV 268
Query: 341 TLRQSLLKQTSRLALEEI 358
+R ++ + + L ++
Sbjct: 269 RMRSAVRAKDADLKTPQV 286
>gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus]
Length = 867
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 126/169 (74%), Gaps = 6/169 (3%)
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G+VA+K+D+A P++ VF + EMID++G+TKGKGY+GV +RW + PRKTH+G
Sbjct: 327 GTVAEKLDWAREAAGAAGPLNQVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPPRKTHQG 386
Query: 249 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEF 302
LRKVACIGAW PA V+F+VARAGQ GYHH+TE NKKIYK+G+ ++A T++
Sbjct: 387 LRKVACIGAWLPAHVAFSVARAGQKGYHHQTETNKKIYKIGQGYLIKDGKLTKNNASTDY 446
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
D +++ I P+GGF HYG V D+L+++GC VG KKRV+TLR+SLL+ +
Sbjct: 447 DLSDRSINPLGGFVHYGEVTNDFLMLEGCVVGTKKRVLTLRKSLLEPDA 495
>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
gi|449066624|ref|YP_007433706.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
gi|449068898|ref|YP_007435979.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363364|sp|Q4JB40.1|RL3_SULAC RecName: Full=50S ribosomal protein L3P
gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
gi|449035132|gb|AGE70558.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius N8]
gi|449037406|gb|AGE72831.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius Ron12/I]
Length = 342
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 197/374 (52%), Gaps = 36/374 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKRA K +P + +P +L F+GYKAGMTH+
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRADEILPTPKNWPLVNLKEP-KLLGFIGYKAGMTHVYMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFY 119
+KP S + KE VTI+E+PP++ + + Y +G L L WA EE ++
Sbjct: 60 DKPTSPNYGKEVYTPVTIVESPPILGLALRAYHIDSKGELSVLVDYWANF--EEGSLKYL 117
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
K S K +K +K + IQ L + T +R+L TQ + L +K+
Sbjct: 118 KRKITSLKVDSSKMKEKLDL------IQKNLNNI----TYMRLLVSTQPWLVPSLGKKRP 167
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++EIQ+ GGS+ ++++ KQIP+ VF++ ++ DIIGVTKGKG++GV+ R+ V
Sbjct: 168 EIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVV 227
Query: 240 RLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESH 296
PR K +G RK IGA P+ + + V + GQ G+H RTE NK+I K+G E
Sbjct: 228 EFPRWHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNE-- 282
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
I P GG +YG+V YL+I+G +G +KR + LR + S +
Sbjct: 283 ------------INPAGGIVNYGLVKNTYLVIEGSVLGSRKRPLFLRYPIRPSWSPESAP 330
Query: 357 EIKLKFIDTSSKFG 370
K+ +++ +S+ G
Sbjct: 331 --KITYVNLASQQG 342
>gi|408404337|ref|YP_006862320.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
gi|408364933|gb|AFU58663.1| 50S ribosomal protein L3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 332
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 185/363 (50%), Gaps = 33/363 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK+ PR GS+ F PR RA +V+ +P+ K L F G+KAG H++
Sbjct: 1 MGHRKYSAPRRGSVAFRPRARARSLEARVRTWPQLAAEK-SSLLGFAGFKAGCIHVLTID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ + K+ T+I TPP+ V+G+ GY K G ++ V+A+ L +E+ R+F
Sbjct: 60 DREKTPNFGKQLLNPATVIVTPPIRVIGIRGYKKDIYGQHAIFDVYAKDLPKELSRKFD- 118
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
KS +AF A+ E M + I + + GL QK
Sbjct: 119 --AKSSDEAF-----------------AKAEGMLGSASAIMAIVAVSPNSI-GLSQKTPF 158
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E+ V+G + D+ +++ + +FQ + ID+ G+T+GKG EG VTR+G+ R
Sbjct: 159 VFEMAVSGKDAKSQYDYVKSVLGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTRFGIKR 218
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R V +G PA V +TVAR GQ G+H RTE NK+I + ++ ++
Sbjct: 219 KQHKSRKSVRAVGTLGPISPAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNS-- 276
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
I P GGF H+G+V DY++++G G KR++ +RQ ++ S+ LE L
Sbjct: 277 --------INPSGGFKHFGLVKGDYIIVRGSVPGVPKRLIKMRQP-IRNVSKKVLEPKVL 327
Query: 361 KFI 363
+ +
Sbjct: 328 EVV 330
>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
Length = 338
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 181/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA+ + ++P DD L F GYKAGMTH+ ++P S
Sbjct: 7 PRKGSLGYGPRTRAANETPRFNSWPSDDGQ--AGLQGFAGYKAGMTHVTLVNDEPNSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V V Y TP G R L VW + E+ R
Sbjct: 65 GMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTEVWTDEFHSELDRAL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ ++ D ++ ++ L+ +RV+ HT ++ + +KK +ME +V G
Sbjct: 115 ---DLPEGHDADAAEEQVRDALDAGD--IADVRVVTHTVPDELANVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS++ + + A + + ++ VF+ E DI VTKGKG +G V RWGV + K
Sbjct: 170 GSLSDRFEHALELVDDGGEHAMNDVFRAGEYADIAAVTKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ Y L+KG GP +R+V R ++ RL E ++F+
Sbjct: 278 ---DASVDGGFVNYGEVDGPYTLVKGSVPGPDQRLVRFRPAVRPNDQPRLDPE---VRFV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STQSNQG 338
>gi|70927424|ref|XP_736100.1| ribosomal protein L3 [Plasmodium chabaudi chabaudi]
gi|56510349|emb|CAH85528.1| ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
Length = 155
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 120/161 (74%), Gaps = 6/161 (3%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSLGFLPRKR R RGK+++FPKD+ TAF+GYK+GM+HIVR+V
Sbjct: 1 MSHRKFERPRHGSLGFLPRKRCKRLRGKIRSFPKDNKELAPHFTAFMGYKSGMSHIVREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
+ PGSKLHKKE EA TI+E P+VVVG+VGY +TP+GL+ L VWA H+++E RRR+YK
Sbjct: 61 D-PGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLTAVWANHVSDEFRRRYYK 119
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR 161
NW KS KKAFTK E K ++++KYCT++R
Sbjct: 120 NWYKSDKKAFTKCLNIPEATKEK-----LYDRIEKYCTILR 155
>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
gi|212288253|sp|A8MB75.1|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
Length = 347
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 184/347 (53%), Gaps = 36/347 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+ + PRKRAS +++ +P D KP L F+GYKAGM H+ ++
Sbjct: 4 KIHRPRRGSMAYYPRKRASDIVPRIRNWPVIDLGKPT-LLGFVGYKAGMVHVTVVDDRKT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP--RGLRSLCTVWAQHLNEEVRRRFYKNW 122
S KE +AVT++ETPPL VVG+ Y P L S+ W ++ EVR+ +
Sbjct: 63 SPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSVGEAWV-NIPNEVRKYIARR- 120
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+K++TD D+Q L+ + I+V+A TQ K G+ +K ++
Sbjct: 121 -------IPTLPEKFDTDKALADLQGLLDS----VSYIKVIAMTQPYK-AGVGKKTPEVL 168
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI V G ++ ++ +A G K++ VF+ +++D+IGVTKGKG +GV+ R+GV L
Sbjct: 169 EIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKRFGVKEL 228
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
PR K +G R+ +G PA V +T R GQ G+H RTE NK+I K+ E
Sbjct: 229 PRWHKHRKGSRRTGTVGP-KPA-VMYTQPRMGQMGFHRRTEYNKRILKISDNGSE----- 281
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
ITP GGF HYG+V Y+LI+G G KR++ R +
Sbjct: 282 ---------ITPKGGFKHYGIVRSGYMLIEGSTPGVVKRLIAFRYPI 319
>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
gi|42559661|sp|Q8TRU7.1|RL3_METAC RecName: Full=50S ribosomal protein L3P
gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
Length = 337
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 186/364 (51%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDTKNSLTQ 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETP + V + Y + G +++ VWA L+ E++RR ++ +
Sbjct: 65 GMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEVWAADLDPELKRRIPIPAAGNQAE 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
A K E +G+ + +R + +T + + G+ +K +ME ++
Sbjct: 125 ALENIGKLIE--EGR-------------VSDVRAVIYTLPKSLTGVPKKVPDIMESGISA 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 247
+ K +++ + + VF+ ++D +T GKG +G V RWG+ + K R
Sbjct: 170 RDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQLMKGKHSRQ 229
Query: 248 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
LR+V +GA++P+RVS+ V + GQ GYH RTE NK+I K+G +E
Sbjct: 230 GSLRQVGTLGAFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
+TP GGF +YG+V DY+LIKG GP KR++ LR + + + L E + +I
Sbjct: 278 --VTPEGGFINYGLVRGDYILIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRE 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|432332011|ref|YP_007250154.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
gi|432138720|gb|AGB03647.1| archaeal ribosomal protein L3 [Methanoregula formicicum SMSP]
Length = 337
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 176/368 (47%), Gaps = 35/368 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA H K +++P + P L F GYK GMTH+V +
Sbjct: 3 KINRPRRGSLAFSPRKRAKSHIPKYQSWPSVE-GAPI-LQGFAGYKVGMTHVVMVDDHKS 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S KE VT+IE P + V + Y K G + +WA+ L+ + RR
Sbjct: 61 SPTEGKEIMVPVTVIEVPAMKVAAIRAYSKDTYGKHAFTELWAEQLDGVLGRRI------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K+Y+ D K + I LA+TQ M G+ +K LMEI
Sbjct: 115 -------NLPKEYDRDAAVKKFSDAVAA--GTVAEIYALAYTQPASMSGVPKKVPDLMEI 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
+V G + + +FA G K++ + V Q DI +T GKG +G V RWGV RK
Sbjct: 166 KVGGADIKKLFEFAQGLLGKEVGLSNVIQTGAYADITAITTGKGTQGAVKRWGVALRKRK 225
Query: 245 THRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
G +K V +G W+P + + V + GQ GY RTE NK+I K+ + + E
Sbjct: 226 HAVGGKKRHVGTLGPWNPHHIRWEVPQIGQLGYQQRTEFNKRILKVSENASE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYGV+ Y+L+KG GP KR++ +R ++ + + + I +F
Sbjct: 278 ------ITPAGGFLHYGVLKNPYVLVKGSIPGPVKRLIRIRPAIRQGEHVVRMPTI--QF 329
Query: 363 IDTSSKFG 370
+ SK G
Sbjct: 330 VSVQSKQG 337
>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
gi|385773363|ref|YP_005645929.1| 50S ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
gi|385776001|ref|YP_005648569.1| 50S ribosomal protein L3 [Sulfolobus islandicus REY15A]
gi|259709737|sp|C4KHF6.1|RL3_SULIK RecName: Full=50S ribosomal protein L3P
gi|259709739|sp|C3MVH8.1|RL3_SULIM RecName: Full=50S ribosomal protein L3P
gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
Length = 351
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 201/380 (52%), Gaps = 39/380 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
+ P S + KE VT++E PP++ + + Y +G ++ T W+ Q L+ R
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
+ ++ K SKKK K+ K + I++ L+++ R+L TQ RK+
Sbjct: 120 IHSFSSFLKNDESKKKFEEKFGSKLDL------IKSNLDRI----VYFRLLVATQPRKIP 169
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV
Sbjct: 170 SLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGV 229
Query: 233 VTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G
Sbjct: 230 IKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD 287
Query: 291 ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQT 350
K+I P GGF YG+V Y+L++G +G KKR + LR+++ +
Sbjct: 288 --------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV--RP 331
Query: 351 SRLALEEIKLKFIDTSSKFG 370
S + K+ +++ SK G
Sbjct: 332 SYVFENAPKITYVNLLSKQG 351
>gi|383625045|ref|ZP_09949451.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
gi|448697501|ref|ZP_21698541.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
gi|445781454|gb|EMA32310.1| 50S ribosomal protein L3P [Halobiforma lacisalsi AJ5]
Length = 339
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 186/367 (50%), Gaps = 39/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PRKRAS + ++P D +P L F GYKAGMTH+V +K S
Sbjct: 7 PRKGSLGFGPRKRASSEVPRFNSWPDTD-GQPT-LQGFAGYKAGMTHVVMVDDKANSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTI+ETPP+ V + Y TP G+ + VW E+ R
Sbjct: 65 GMEQTVPVTIVETPPMRAVALRAYEDTPYGMNPVTEVWTDEFAPELDR------------ 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
Y++D +++ LE + +R + HT ++ + +KK +ME ++ G
Sbjct: 113 VLDLPGDDYDSDAAADELRGLLENGR--VDDVRAITHTVPSEVPSVPKKKPDVMETRIGG 170
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GSV ++VDF + ++ VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 171 GSVDERVDFGLELLGDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHA 230
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ +
Sbjct: 231 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDMGEGA------------ 278
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D T GGF +YG V+ + LIKG GP+KR+V R ++ RL E ++++
Sbjct: 279 ---DATVDGGFVNYGEVDGPHALIKGSLPGPEKRLVRFRPAIRPGDQPRLDPE---VRYV 332
Query: 364 DTSSKFG 370
T+S G
Sbjct: 333 STASNQG 339
>gi|435852138|ref|YP_007313724.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
15978]
gi|433662768|gb|AGB50194.1| archaeal ribosomal protein L3 [Methanomethylovorans hollandica DSM
15978]
Length = 337
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 187/368 (50%), Gaps = 35/368 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA + +++P D ++ F GYK GMTH+V +
Sbjct: 3 KGHRPRRGSLAFSPRKRAQSPIPRYRSWPVSDAG--IKIQDFAGYKVGMTHVVIIDDTKN 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E VT+IETP + V + Y K G R+L W + L+ + +
Sbjct: 61 SLTEGLEITVPVTVIETPAIRVAAIRAYGKDTVGERALAEAWTKELDTSLAQTI------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K K++T+ I+ + + K + IRV+ +T + + G+ +K A +ME
Sbjct: 115 -------KVPLKHDTNAALGKIEQLMNEGK--VSDIRVVTYTLPKSITGVPKKNADIMET 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
++G + K ++A K++ I VF+ ++D+ +T GKG +G V RWG+ K
Sbjct: 166 GISGANSKDKYEYAKSILGKEVRISDVFKGGSLVDVAAITIGKGTQGPVKRWGIMLQKGK 225
Query: 245 THR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R LR++ +G + PA V++ V + GQ G+H RTE NK+I+K+G +E
Sbjct: 226 HSRQGSLRQIGTLGPFRPAHVNWRVPQMGQTGFHQRTECNKRIFKIGTNPEE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
I P+GGF ++G+V DY+LIKG GP KR++ LR+ + S A+ E ++
Sbjct: 278 ------INPVGGFTNFGLVRNDYVLIKGSVPGPSKRLIRLREPTRARVS--AMGEPQIVH 329
Query: 363 IDTSSKFG 370
I T SK G
Sbjct: 330 ISTQSKQG 337
>gi|68011480|ref|XP_671157.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487082|emb|CAH93715.1| hypothetical protein PB000142.00.0 [Plasmodium berghei]
Length = 139
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/135 (66%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
CIGAWHPARV F V R GQ GY HRTE NKKIY++G ++ ++A T+ D TEK ITPMG
Sbjct: 1 CIGAWHPARVQFQVPRHGQKGYFHRTERNKKIYRIG-LKKDKNNASTDADITEKKITPMG 59
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGR 373
GFPHYGVVNED++L+KGC G KKR +TLR++L+ Q SR AL ++ LKFIDTSSK GHGR
Sbjct: 60 GFPHYGVVNEDFILLKGCISGTKKRPITLRKTLVPQVSRDALSQVSLKFIDTSSKLGHGR 119
Query: 374 FQTTQEKAKYYGRLK 388
FQT++EK KYYG LK
Sbjct: 120 FQTSEEKIKYYGPLK 134
>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
gi|284997894|ref|YP_003419661.1| 50S ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
gi|259709738|sp|C3MQ59.1|RL3_SULIL RecName: Full=50S ribosomal protein L3P
gi|259709740|sp|C3NHA9.1|RL3_SULIN RecName: Full=50S ribosomal protein L3P
gi|259709741|sp|C3NEE3.1|RL3_SULIY RecName: Full=50S ribosomal protein L3P
gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
Length = 351
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 203/381 (53%), Gaps = 41/381 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GM+H+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSPNP-KLLGFVGYKVGMSHVFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWAQHLNE--EVRRR 117
+ P S + KE VT++E PP++ + + Y +G ++ T W+ + ++ RR
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVITEYWSPSSLQFLDITRR 119
Query: 118 ------FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKM 171
F KN +SKKK K+ K + I++ L+++ + R+L TQ RK+
Sbjct: 120 IHSLSSFLKN-DESKKKFEEKFGSKLDL------IKSNLDRIVYF----RLLVATQPRKI 168
Query: 172 KGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEG 231
L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ G
Sbjct: 169 PSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAG 228
Query: 232 VVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
V+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G
Sbjct: 229 VIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIG 286
Query: 290 KASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
K+I P GGF YG+V Y+L++G +G KKR + LR+++ +
Sbjct: 287 D--------------DPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRPIFLREAV--R 330
Query: 350 TSRLALEEIKLKFIDTSSKFG 370
S + K+ +++ SK G
Sbjct: 331 PSYVFENAPKITYVNLLSKQG 351
>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
Length = 334
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 181/340 (53%), Gaps = 37/340 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS + PRKRA +V+ +P++ F GYK GM H++ S +
Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+E A T+IE PPL VV V Y KTP G ++LC VWA+ L +++ R F
Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K + Y + KK LE++K + +RVLA TQ R + GL +KK L+EI V G
Sbjct: 113 PLPK-DQSYHEEQLKK-----LEEVKSRVSEVRVLAATQPR-LSGLGKKKPELIEIAV-G 164
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTH 246
G + + A K + I VF++ + ID+I VTKGKG++G V R+GV +PR K
Sbjct: 165 GPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMPRWHKHR 224
Query: 247 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+G ++ +G PA + F GQ G+H RTE NK+I K+G A +
Sbjct: 225 KGHSRIGSVGPQKPA-IMFYTPFPGQLGFHQRTEYNKRILKVGDAE------------SL 271
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
K+I P GG+PHYG+V +++++G G KR+V LR ++
Sbjct: 272 KEINPPGGWPHYGLVRSQFIIVEGSVPGAVKRLVRLRHAI 311
>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
Length = 337
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 184/366 (50%), Gaps = 39/366 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P GSL + PRKRA H K +++P D + +L F GYK GMTH++ + S
Sbjct: 7 PNRGSLAYSPRKRAKSHIPKFRSWPNLDGN--PKLQDFAGYKVGMTHVIMIDDTKNSVTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E T++ETP + V + Y + G + + WA L+ +V R+
Sbjct: 65 GAEISVPATVVETPDIGVASIRAYKDSEYGKKPVAEAWATDLDADVLRKV---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTV--IRVLAHTQIRKMKGLKQKKAHLMEIQV 186
K + D +K ++ ++E + TV +RV+ +T + G+ +KK+ +ME V
Sbjct: 115 ------KSPDNHDTEKSLE-KMESLIDDGTVKDLRVVTYTLPSNLTGVPKKKSDIMETGV 167
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
+G + +K ++A +I I VF ++DI +T GKG +G V RWG+ K +
Sbjct: 168 SGSDMKEKFEYAKSILGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQIAKHKHN 227
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R+V +G WHPA +S+ V + GQ GYH RTE NK+I K+ E
Sbjct: 228 RAGSARQVGTLGPWHPAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSE---------- 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
I P GGF +YG+V +Y+LIKG GP KR+V R + + S + +E ++ ++
Sbjct: 278 ----INPDGGFLNYGLVRGNYVLIKGSVPGPSKRLVRFRDPIRSKVS--STKEPQIVHLN 331
Query: 365 TSSKFG 370
T SK G
Sbjct: 332 TQSKQG 337
>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
Length = 330
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 183/366 (50%), Gaps = 46/366 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++P DD L AF GYKAGMTH+V +K +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQAFAGYKAGMTHVVLVDDKANAPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT+ ETPP+ V + Y TP G + L VWA +E + R ++
Sbjct: 65 GMETTVPVTV-ETPPMRAVRL--YEDTPYGKKPLTEVWADDTHESLDRTL----SVPTRR 117
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ + +T++ IRV+ HT G+ +K +ME +V G
Sbjct: 118 VTDELIEALDTEE---------------IADIRVITHTVPGDHAGVPKKNPDVMETRVGG 162
Query: 189 GSVAQKVDFAYGFFEKQI--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
G++A +++FA E VF+ E D G+TKGKG +G V RWGV + K
Sbjct: 163 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFADAAGITKGKGTQGPVKRWGVQKRKGKHA 222
Query: 247 RGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
R + R++ +G W+P+RV TV + GQ GYH RTE+NK++ + + S
Sbjct: 223 RHVARRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPS---------- 272
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFID 364
P GGFP+YG V+ Y L+KG GP++R+V R + ++ RL E ++++
Sbjct: 273 -----PDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRLGVRPNESPRLDPE---VRYVS 324
Query: 365 TSSKFG 370
T+S G
Sbjct: 325 TASNQG 330
>gi|383319753|ref|YP_005380594.1| 50S ribosomal protein L3 [Methanocella conradii HZ254]
gi|379321123|gb|AFD00076.1| LSU ribosomal protein L3P [Methanocella conradii HZ254]
Length = 341
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/375 (32%), Positives = 188/375 (50%), Gaps = 37/375 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH PR GSL + PR RA + K + + + + ++ + +G+KAGM+H++
Sbjct: 1 MSHP--HAPRRGSLAYSPRVRARSQKPKYRNW--AELGEQPKIQSLIGFKAGMSHVLMID 56
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++P S E VTIIE P + V G+ Y P G + + WA L + R
Sbjct: 57 DRPHSTTEGMEIAVPVTIIEAPAMHVAGIRAYDDGPYGKKVIAEAWASDLKDLAR----- 111
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ +K DG+ A L K K +R+L + + + G+ +K
Sbjct: 112 ---------LIRLPRKAVDTDGQLAKIAGLVKEGKVAD-LRLLTYVKTEDVSGIPKKVPE 161
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
L+E ++ GGS+ ++ + A KQ+ + +F E++D+ +TKGKG +G V RWG+
Sbjct: 162 LVENRIAGGSMDKRFELAKSLLGKQVKANDIFSPGELVDVSAITKGKGTQGPVKRWGIAI 221
Query: 241 LPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
RK R R V +G W+P R+ + V + GQ GYH RTE NK+I KLG ++E
Sbjct: 222 QKRKHARTGKRRHVGNLGPWNPHRIRWQVPQLGQTGYHQRTEYNKRIIKLGDKAEE---- 277
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
+TP GGF HYGV+ Y+++KG GP KR+V LR ++ + L +
Sbjct: 278 ----------VTPAGGFLHYGVLRNPYIVVKGSIPGPVKRMVRLRPAVRPKA--LPKQAP 325
Query: 359 KLKFIDTSSKFGHGR 373
++ +I T SK G R
Sbjct: 326 EITYISTESKQGARR 340
>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
gi|212288413|sp|A3DNA4.1|RL3_STAMF RecName: Full=50S ribosomal protein L3P
gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
Length = 395
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 218/418 (52%), Gaps = 72/418 (17%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP------------------KDDPSKPCR 42
M HRK+ PRHGSLG PRKRA++ +++++P K KP
Sbjct: 1 MGHRKYSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRS 101
L ++ YKAGM+H + ++P + KE VT+++ PP++++G+ GY P GL S
Sbjct: 60 LLGYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLS 119
Query: 102 LCTVW---AQHLNE-----------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
VW + L E ++ R++ K N K + ++Y K
Sbjct: 120 FGEVWRSPVEALKELYEKIYSDNPFINLGAKDIVRKYLKGLRKVNPGLVKPEPHSEYGFK 179
Query: 137 YETDDGKKDIQAQLEKMKKY-CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKV 195
+ ++ K+ +LE++K IRV+A T I + G+ +KK ++EI++ GG++++++
Sbjct: 180 FLENNWKE----KLERLKAAELADIRVIAST-IPVLSGIGKKKPEIIEIKIGGGTLSERI 234
Query: 196 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVA 253
D+A + +D VF++ + IDIIGVTKGKG++GV+ R+GV LPR K +G RK
Sbjct: 235 DYAEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK-- 292
Query: 254 CIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPM 312
IG+ P + + + GQ G+H RTE NK+I K+G E +TP
Sbjct: 293 -IGSRSPGFGTMSETPQPGQMGFHRRTEYNKRIIKIGINGWE--------------VTPK 337
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
GGF YG+V Y+++ G +GP+KR++ LR ++ S LE ++ + SK G
Sbjct: 338 GGFLGYGIVYGPYIMLHGSIIGPRKRLLVLRHP-IRPPSWYPLEAPQIIYYSHESKQG 394
>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
gi|384434237|ref|YP_005643595.1| 50S ribosomal protein L3 [Sulfolobus solfataricus 98/2]
gi|9910845|sp|Q9UXA8.1|RL3_SULSO RecName: Full=50S ribosomal protein L3P
gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
Length = 351
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 37/356 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+S + +P+ + P +L F+GYK GMTH+
Sbjct: 1 MGHRKLASPRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT-VWA----QHLNEEVR 115
+ P S + KE VT++E PP++ + + Y +G ++ T W+ Q L+ R
Sbjct: 60 DWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRR 119
Query: 116 RRFYKNWCK---SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMK 172
++ K SKKK ++ K + I++ L+++ + R+L TQ RK+
Sbjct: 120 IHSISSFLKDDESKKKFDERFNTKLDL------IKSNLDRIVYF----RLLVSTQPRKIP 169
Query: 173 GLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGV 232
L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV
Sbjct: 170 SLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGV 229
Query: 233 VTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G
Sbjct: 230 IKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGD 287
Query: 291 ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+E I P GGF YG+V Y+L++G +G KKR + LR+ +
Sbjct: 288 EPKE--------------INPAGGFVRYGIVRNTYVLLEGSILGSKKRPIFLREPV 329
>gi|399577346|ref|ZP_10771099.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
gi|399237729|gb|EJN58660.1| 50S ribosomal protein L3P [Halogranum salarium B-1]
Length = 327
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 185/362 (51%), Gaps = 40/362 (11%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+GF PRKRA+ +++++P DD P L F GYKAGMTH+V ++ S E
Sbjct: 1 MGFGPRKRAASEVPRIRSWP-DDEGSPA-LQGFAGYKAGMTHVVMVNDESNSPREGMEES 58
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
VT++ETPP+ V + Y T G + + VW +EE+ R
Sbjct: 59 VPVTVVETPPMRAVALRAYKDTAYGKKPVTEVWTTEFHEELDRTL-------------DL 105
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
+ D+ +++A L+ K +R++ HT + + +KK +ME +V GGS+ +
Sbjct: 106 PAESTFDEDADELRALLDDGK--VDDLRMITHTVPSALNNVPKKKPDVMETRVGGGSLDE 163
Query: 194 KVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--L 249
+ D+A E + +D VF+ E +D+ GVTKGKG +G V RWGV + K R
Sbjct: 164 RADYALELVEAGGEHSMDDVFRPGEYLDVSGVTKGKGTQGPVKRWGVQKRKGKHARQGWR 223
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDI 309
R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ D
Sbjct: 224 RRIGNLGPWNPSRVRSTVPQQGQMGYHQRTELNKRLIDVGEGD---------------DA 268
Query: 310 TPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFIDTSSK 368
+ GGF +YG V +Y LIKG GP KR++ R ++ RL E ++++ T+S
Sbjct: 269 SVDGGFVNYGEVTGNYALIKGSLPGPNKRLIRFRPAVRPNDQPRLDPE---VRYVSTASN 325
Query: 369 FG 370
G
Sbjct: 326 QG 327
>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
gi|121689445|sp|Q12ZV1.1|RL3_METBU RecName: Full=50S ribosomal protein L3P
gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
Length = 337
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 178/361 (49%), Gaps = 43/361 (11%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKR+ H + +++P+ D ++P +L F GYK GMTH++ +
Sbjct: 3 KGHRPRRGSLAYSPRKRSQSHIPRFRSWPESD-AEP-KLQGFAGYKVGMTHVIMIDDVKH 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E VTIIETP + V + Y K G ++ W L++++ RR K
Sbjct: 61 SLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAEAWTDVLDKDLSRRL-----K 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKY-----CTVIRVLAHTQIRKMKGLKQKKA 179
+ K D+ A LEK++ IR++ +T + G+ +K
Sbjct: 116 TAKNP---------------DVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVP 160
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+ME V+G V K ++A + I VF +++D+ +T G G +G V RWG+
Sbjct: 161 DVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGIN 220
Query: 240 RLPRKTHR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
+ K R LR+V +G W PA VS+ V +AGQ GYH RT+ NK+I K+ E
Sbjct: 221 LMKNKHSRQGSLRQVGTLGPWTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDE--- 277
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
+ P GGF +YG+V +Y+LIKG GP KR++ LR+ + S + +
Sbjct: 278 -----------VNPAGGFVNYGLVRGNYILIKGSVPGPSKRLIRLREPTRSKVSSIGEPQ 326
Query: 358 I 358
I
Sbjct: 327 I 327
>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
Length = 341
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 192/382 (50%), Gaps = 52/382 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPK--DDPSKPCRLTAFLGYKAGMTHIVR 58
MSH PR GSL + PR RA + K +++ + D P +L + +G+KAGM+H+V
Sbjct: 1 MSHP--HAPRRGSLAYSPRVRARSQKPKYRSWAELGDQP----KLQSLVGFKAGMSHVVM 54
Query: 59 DVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF 118
++P S E VTIIETP + V G+ Y P G L W
Sbjct: 55 VDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEAWV----------- 103
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYC-----TVIRVLAHTQIRKMKG 173
N K K F + K +TD AQL K+ +R+L + + ++ G
Sbjct: 104 --NDAKDLAKLF-RLPKSVDTD-------AQLAKVAGLVKDGKVAELRLLTYVKTEEVSG 153
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
+ +K L+E +V GGS+ ++ +FA KQ+ + +F E++D+ +TKGKG +G V
Sbjct: 154 IPKKVPELLENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPV 213
Query: 234 TRWGVTRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
RWG+ RK R +K V +G W+P RV + V + GQ GYH RTE NK+I KLG+
Sbjct: 214 KRWGIAIQKRKHARTGKKRHVGNLGPWNPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEK 273
Query: 292 SQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
++E +TP GGF HYGV+ Y+++KG GP KR+V +R ++ +
Sbjct: 274 AEE--------------VTPEGGFLHYGVLRNPYIVVKGSIPGPVKRMVRVRPAV--RPK 317
Query: 352 RLALEEIKLKFIDTSSKFGHGR 373
+ + ++ I SK G R
Sbjct: 318 NMPKQAPEVTHISKQSKQGSSR 339
>gi|448503712|ref|ZP_21613341.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
gi|445691913|gb|ELZ44096.1| 50S ribosomal protein L3P [Halorubrum coriense DSM 10284]
Length = 338
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 184/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRAESEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETP + V V Y TP G + + VWA +EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ +E D +++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 116 --LPAEETFEAD--ADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++VDFA + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERVDFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP +R++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDQRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|448489440|ref|ZP_21607663.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
gi|445694812|gb|ELZ46930.1| 50S ribosomal protein L3P [Halorubrum californiensis DSM 19288]
Length = 338
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 184/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETP + V V Y TP G + + VWA +EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRAL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ +E D +++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 115 -DLPAEETFEED--ADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++ DFA + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP +R++ LR ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDQRLLRLRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|410670351|ref|YP_006922722.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
gi|409169479|gb|AFV23354.1| 50S ribosomal protein L3P [Methanolobus psychrophilus R15]
Length = 337
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 182/368 (49%), Gaps = 35/368 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA H + ++P+ + +L F GYK GMTH++ +
Sbjct: 3 KGHRPRRGSLAYSPRKRAKSHIPRFNSWPES--AGEPKLQDFAGYKVGMTHVILVDDVKN 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E VT++ETP + V + Y G +++ W+ L+ + + +
Sbjct: 61 SLTEGMEISVPVTVVETPAVRVAAIRAYASDSYGGKAIAEAWSSDLDPSLGKTIH----- 115
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K TD + I + +E + I+V+ +T + + G+ +K + +ME
Sbjct: 116 --------LPKTATTDASLEKISSLIEN--GTVSDIKVVTYTLPKNLTGVPKKNSDIMET 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
V+G + + ++A +I I VF ID+ +T GKG +G V RWG++ + K
Sbjct: 166 AVSGSDLKARFEYAKSILGSEIKISDVFNNGTFIDVAAITIGKGTQGPVKRWGISMMKGK 225
Query: 245 THR--GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R LR++ +G +HPARV++ V + GQ GYH RT+ NK+I ++ E
Sbjct: 226 HSRQGSLRQIGTLGPFHPARVNWRVPQMGQMGYHQRTDFNKRILRVSTNGDE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
I P GGF +YG+V DY+LIKG GP KR+V LR + + S A+ E +L
Sbjct: 278 ------INPEGGFINYGLVRGDYILIKGSIPGPSKRLVRLRDPMRAKVS--AMGEPQLLH 329
Query: 363 IDTSSKFG 370
+ T S+ G
Sbjct: 330 VSTQSQQG 337
>gi|448426507|ref|ZP_21583356.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
gi|448452123|ref|ZP_21593143.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
gi|448484334|ref|ZP_21606041.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
gi|448508628|ref|ZP_21615579.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
gi|448517689|ref|ZP_21617263.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
gi|445679387|gb|ELZ31854.1| 50S ribosomal protein L3P [Halorubrum terrestre JCM 10247]
gi|445697254|gb|ELZ49324.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 9100]
gi|445705904|gb|ELZ57792.1| 50S ribosomal protein L3P [Halorubrum distributum JCM 10118]
gi|445809767|gb|EMA59805.1| 50S ribosomal protein L3P [Halorubrum litoreum JCM 13561]
gi|445820109|gb|EMA69938.1| 50S ribosomal protein L3P [Halorubrum arcis JCM 13916]
Length = 338
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 183/367 (49%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETP + V V Y TP G + + VWA +EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYENTPYGQKPVEEVWATEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+ +E D +++A L+ RV+ HT + + +KK +ME +V G
Sbjct: 116 --LPAEETFEED--ADELRALLDDDVVDDV--RVITHTAPSDLSNVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++ DFA VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVADGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP +R++ LR ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDQRLLRLRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|448436252|ref|ZP_21587053.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
gi|448535708|ref|ZP_21622228.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
gi|445682920|gb|ELZ35330.1| 50S ribosomal protein L3P [Halorubrum tebenquichense DSM 14210]
gi|445703209|gb|ELZ55144.1| 50S ribosomal protein L3P [Halorubrum hochstenium ATCC 700873]
Length = 338
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 185/367 (50%), Gaps = 40/367 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA +++++P+DD P L F GYKAGMTH++ ++ S
Sbjct: 7 PRKGSLGYGPRTRADSEVPRIRSWPEDD-GAPA-LQGFAGYKAGMTHVMMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETP + V V Y +TP G + + VW+ +EE+ R
Sbjct: 65 GMEEAVPVTVVETPQMYAVAVRAYEETPYGQKPVAEVWSGEFHEELDRALD--------- 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+E D ++++A L+ RV+ HT ++ + +KK +ME +V G
Sbjct: 116 --LPAEDTFEAD--AEELRALLDDDVVDDV--RVITHTAPSELSNVPKKKPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIP--IDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ ++ DFA + VF+ + D+ G+TKGKG +G V RWGV + K
Sbjct: 170 GSLEERADFALDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWGVQKRKGKHA 229
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 230 RQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD------------ 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKFI 363
D + GGF +YG V+ +Y LIKG GP +R++ R ++ RL E ++++
Sbjct: 278 ---DASVDGGFVNYGEVDGEYALIKGSLPGPDQRLLRFRPAIRPNDQPRLDPE---VRYV 331
Query: 364 DTSSKFG 370
T S G
Sbjct: 332 STESNQG 338
>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
Length = 341
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 193/374 (51%), Gaps = 37/374 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+ +++P + S P L F+GYKAGMTH+
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRSEDILPSPRSYPVLNSSSPVML-GFIGYKAGMTHVYMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFY 119
E S ++ KE VT+IETPP++V+ + Y +G S+ VW + + ++
Sbjct: 60 EDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMSIGEVWGDLSD---KSKYI 116
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
KS K +K +T+ K I++ L+ + + R+L TQ + L +K
Sbjct: 117 TRRIKSLK------IQKEKTEQQLKKIESNLDNI----SFFRLLVSTQPYLIPSLGKKTP 166
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
+ EIQ+ GG+ +++ + + VF + ++IDI+GVT G G++GV+ R+GV
Sbjct: 167 DIAEIQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIKRYGVQ 226
Query: 240 RLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESH 296
LPR K +G RKV G P+ + + V + GQ GYH RTE NK+I ++ +
Sbjct: 227 ELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQMGYHRRTEYNKRILRISDEINQ-- 281
Query: 297 SAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALE 356
I P GGF YG+V YLL++G +GP KR + LR + +++L +
Sbjct: 282 ------------INPKGGFVRYGLVRNTYLLVQGSTIGPIKRPLFLRYPIRPYSNQLPVP 329
Query: 357 EIKLKFIDTSSKFG 370
KL ++D +SK G
Sbjct: 330 --KLTYVDLNSKQG 341
>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
gi|42559655|sp|Q8PV50.1|RL3_METMA RecName: Full=50S ribosomal protein L3P
gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
Length = 337
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GSL F PRKRA H + +A+P + + +L +F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPKLQSFAGYKVGMTHVIMVDDIKNSLTQ 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT+IETP + V V Y + G +++ WA L+ E++RR ++ +
Sbjct: 65 GMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAE 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K E +G+ + IR + +T + + G+ +K +ME ++
Sbjct: 125 GLENIGKLIE--EGR-------------VSDIRAVTYTLPKSLTGVPKKVPDIMESGISA 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 247
+ K ++A + + VF+ ++D +T GKG +G V RWG+ K R
Sbjct: 170 KDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQ 229
Query: 248 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
LR++ +G+++P+RVS+ V + GQ GYH RTE NK+I K+G +E
Sbjct: 230 GSLRQIGTLGSFNPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
+TP GGF +YG+V DY+LIKG GP KR++ LR + + + L E + +I
Sbjct: 278 --VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRE 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|26245428|gb|AAN77574.1| ribosomal protein L3 [Fundulus heteroclitus]
Length = 154
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
Query: 75 AVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYT 134
AVTI+ETPP+VVVGVVGYV TPRGLRS T++++H+++E +RRFY+NW KSKKKAFTKY
Sbjct: 1 AVTIVETPPMVVVGVVGYVSTPRGLRSFKTIFSEHMSDECKRRFYRNWYKSKKKAFTKYC 60
Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQK 194
KK++ ++GKK ++ MKKYC V+RV+AHTQ+R + L+QKK+HLME+Q+NGG+++ K
Sbjct: 61 KKWQDEEGKKQLEKDFSAMKKYCQVVRVIAHTQMR-LLPLRQKKSHLMEVQLNGGTISDK 119
Query: 195 VDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
VD+A E+Q+ + AVF +DEMID+IGVTKG G+
Sbjct: 120 VDWAREKLEQQVAVSAVFSQDEMIDVIGVTKGHGW 154
>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
Length = 337
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 180/347 (51%), Gaps = 38/347 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GS+G PRKRAS +V+ +P + KP L F YK GM H V ++
Sbjct: 4 KINRPRRGSMGVYPRKRASDIVPRVRTWPDPNLGKPS-LLGFAAYKVGMLHAVVVEDRQT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
S L KE +A T++E PPL V+ Y P G R ++ VWA + ++V R
Sbjct: 63 SPLFGKEVVKAATVLEAPPLRVIAARLYTLDPTNGYRKAVGEVWAPEVPKDVYR------ 116
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
A +K++ + K I+A +K +R + TQ R + G+ +K ++
Sbjct: 117 ------AVKTLPEKFDLEAELKRIEA----VKGMAVDVRAIVATQPR-LAGIGKKTPEIL 165
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI + G SV ++ FA K++ I VF +++D++ +T+GKG++GV+ R+GV L
Sbjct: 166 EIPIGGVPSVEDRLKFALDMLGKEVRISDVFSAGQLVDVLAITRGKGWQGVIKRFGVKIL 225
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
PR K +G R+ IG PA + FT R GQ G+H RTE NK+I K+G E
Sbjct: 226 PRWHKHRKGHRRTGTIGPQSPA-LMFTQPRPGQMGFHQRTEYNKRILKIGNNPAE----- 279
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
I P GG+PHYG+V D+L++ G G +KR+V LR +
Sbjct: 280 ---------INPKGGWPHYGLVKSDFLVLSGSVPGVQKRLVVLRHPV 317
>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
gi|74567866|sp|Q6L1C7.1|RL3_PICTO RecName: Full=50S ribosomal protein L3P
gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
Length = 329
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 44/365 (12%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
H R GS+ + PR RA R +G ++++P+ + ++ AF GYK GMTHI + S
Sbjct: 6 HSRRGSMAYYPRVRAKRIQGDIRSWPEIEGQ--TKVQAFAGYKVGMTHIQMVDYRKNSVT 63
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
+ VT++E PPL V+ + Y + GL + WA++++++V RR K
Sbjct: 64 AGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEEWAENIDKDVLRRINK------- 116
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
++ K E D +R++ HT + + G+ K + EI++
Sbjct: 117 --INRHKKGIEVKD---------------VDDVRLMVHTNPQLVSGVPSKTPEIFEIRIG 159
Query: 188 GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR 247
G ++ ++ +A I + +D+I VTKGKG++GVV R+GV LPRK +
Sbjct: 160 GSTIENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRK 219
Query: 248 GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE- 306
R + +G WHP V TV +AGQ G+H RT N +I K FD +
Sbjct: 220 HRRMIGTLGPWHPDWVRNTVPQAGQVGFHQRTIHNIRIIK--------------FDTKDH 265
Query: 307 -KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
DI GGF +YG+V DY+L+ G GP KR++ +R + +R A+E I++ ++
Sbjct: 266 VDDINVKGGFLNYGIVRNDYVLLFGSVPGPAKRLIKMRDP--ARQTRPAVESIEVTYVSR 323
Query: 366 SSKFG 370
SK G
Sbjct: 324 ESKQG 328
>gi|345005655|ref|YP_004808508.1| 50S ribosomal protein L3 [halophilic archaeon DL31]
gi|344321281|gb|AEN06135.1| ribosomal protein L3 [halophilic archaeon DL31]
Length = 338
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 184/370 (49%), Gaps = 46/370 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLGF PR RA+ +++++P+D+ S P L F GYKAGMTH+V ++ S
Sbjct: 7 PRKGSLGFGPRTRAASEVPRIRSWPEDEGS-PA-LQGFAGYKAGMTHVVMVNDEEDSARE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF---YKNWCKS 125
E VT++ETPP+ V V Y T G + VW ++E+ R +N +
Sbjct: 65 GMEESVPVTVVETPPIRAVAVRAYEDTAYGKKPAAEVWTGEFHDELDRALDLPEENDFEG 124
Query: 126 KKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQ 185
++ DD +RV+ HT ++ + +K+ +ME +
Sbjct: 125 DADELRTLVEEGSVDD------------------LRVITHTTPSELANIPKKEPDVMETR 166
Query: 186 VNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
V GGS+ ++VDFA E + VF+ + +D G+TKGKG +G V RWGV +
Sbjct: 167 VGGGSLQERVDFALDLVEDGGEHEFGDVFRAGQYLDASGITKGKGTQGPVKRWGVQKRKG 226
Query: 244 KTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTE 301
K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G+
Sbjct: 227 KHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGD--------- 277
Query: 302 FDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKL 360
D + GGF +YG V+ Y L+KG GP +R++ R ++ RL E +
Sbjct: 278 ------DASVDGGFVNYGEVDGHYALVKGSLPGPDQRLLRFRGAVRPNDQPRLDPE---V 328
Query: 361 KFIDTSSKFG 370
+++ T+S G
Sbjct: 329 RYVSTASNQG 338
>gi|40641603|emb|CAE54281.1| putative ribosomal protein [Triticum aestivum]
Length = 98
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/96 (89%), Positives = 93/96 (96%)
Query: 163 LAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIG 222
+AHTQIRKMKGLKQKKAHLMEIQ+NGG++A KVD+ Y FFEK++PIDAVFQKDEMIDIIG
Sbjct: 1 IAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYSFFEKEVPIDAVFQKDEMIDIIG 60
Query: 223 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 258
VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW
Sbjct: 61 VTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW 96
>gi|448730377|ref|ZP_21712685.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
gi|445793545|gb|EMA44117.1| 50S ribosomal protein L3P [Halococcus saccharolyticus DSM 5350]
Length = 337
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 180/369 (48%), Gaps = 43/369 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR+RAS + ++P+ D +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP GLR L W + ++ R ++
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AF + + + D IR + HT +M + +K+ +ME ++ G
Sbjct: 125 AFREAISEADIGD------------------IRAITHTVPGEMANVPKKRPDVMETRIGG 166
Query: 189 GSVAQKVDFAYGFFE--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ +V+F + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 GSLDDRVEFGLELITGGGEHNLTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G + S
Sbjct: 227 RQGYRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDAGDGDEPSVD------- 279
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
GGF +YG ++ Y L+KG GP +R++ R ++ RL E ++++
Sbjct: 280 --------GGFVNYGEIDGPYALVKGSLPGPDQRLLRFRPAIRPGDQPRLDPE---VRYV 328
Query: 364 DTSSKFGHG 372
T+S G G
Sbjct: 329 STASNQGQG 337
>gi|374630590|ref|ZP_09702975.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
gi|373908703|gb|EHQ36807.1| LSU ribosomal protein L3P [Methanoplanus limicola DSM 2279]
Length = 337
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 178/364 (48%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K +++ ++ +P +L F GYK GMTHIV + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYQSW-QECAGEP-KLQGFAGYKVGMTHIVMVDDHKNSPSE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KE VTI+E PP+ + V Y K G + VWA L+ +++ R
Sbjct: 65 GKEIAVPVTIVEIPPIKAMAVRAYTKDTYGKKVFAEVWADELDGKLKDRI---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
KK ++ + I +E K I VL HTQ + G+ +K +ME++V G
Sbjct: 115 ---SIPKKNNAEENIQKINEAIEAGK--VIDIFVLVHTQPAMLTGVPKKVPDMMEMRVGG 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G + D A G F +++ ++ + + ID+ VT GKG G V RWG+ RK RG
Sbjct: 170 GDIKACFDHAIGLFGREVELEDIAGVGQYIDVTAVTTGKGTNGPVKRWGIPVRKRKHSRG 229
Query: 249 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+K + +G W P V + V + GQ GY RTE NK+I K+G +E
Sbjct: 230 KKKRHIGNLGPWTPHHVRWQVPQIGQMGYQQRTEFNKRILKVGDNPEE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
I P GGF HYG+V Y+ IKG GP KR++ +R ++ + + E + +I T
Sbjct: 278 --INPAGGFLHYGLVRGRYIAIKGSIPGPTKRLIRIRPAI--RQGEHVVREPSISYISTM 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
gi|212288407|sp|A2SPK3.1|RL3_METLZ RecName: Full=50S ribosomal protein L3P
gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
Length = 333
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/367 (33%), Positives = 186/367 (50%), Gaps = 44/367 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K +++P+ + +P L F GYKAGMTH++ + S
Sbjct: 6 PRAGSLAYYPRKRAKGIVPKYQSWPEYN-GQPM-LQGFAGYKAGMTHVIMIDDHKKSPTE 63
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
KE VT+IE P + V + YVK G L VWA++L E + R K+K
Sbjct: 64 GKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHPLTEVWAENL-EALSGRI----TKAKTN 118
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K T+K G + VL +T+ ++ G+ +K LMEI+V G
Sbjct: 119 NAAKATEKINAAIGD-------------VVEVMVLMYTKPTELTGVPKKVPDLMEIRVAG 165
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
GS ++ D+A + + ++ + + DI G+TKGKG++G V R+G+T RK R
Sbjct: 166 GSAQERFDYALSILGTDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGITLRKRKHART 225
Query: 249 --LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
R + +G W P V + V GQ G+ RTE NK+I K+G+ + E
Sbjct: 226 KKERHIGTLGPWTPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADE------------ 273
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK---LKFI 363
I P GGF HYG+V +Y+LIKG GP KR+V +R + +R+ ++I+ ++++
Sbjct: 274 --INPAGGFLHYGLVRNNYVLIKGSIPGPAKRLVRIRSA-----TRMGEQKIQAPVVEYV 326
Query: 364 DTSSKFG 370
SK G
Sbjct: 327 SLQSKQG 333
>gi|355571383|ref|ZP_09042635.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
gi|354825771|gb|EHF09993.1| ribosomal protein L3 [Methanolinea tarda NOBI-1]
Length = 337
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 181/370 (48%), Gaps = 39/370 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEK 62
K PR GSL F PRKRA + +++P + DP L F GYK GMTH++ +
Sbjct: 3 KINQPRKGSLAFSPRKRAKSPVPRYQSWPSYQGDPV----LQGFAGYKVGMTHVIMVDDH 58
Query: 63 PGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNW 122
S K+ VT++E PP+ V + Y + G L VWA L++ + +R
Sbjct: 59 KNSPTEGKDIMVPVTVVEIPPMKVAAIRAYSRDTYGRHPLTEVWAGELDKALGKRI---- 114
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
K+Y+ + ++ + K I + HT ++ G+ +K +M
Sbjct: 115 ---------TLPKEYDFSGAMEALKDAIAK--GVAEEIFAVMHTLPGQVSGVPKKVPEIM 163
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
EI+V GG+V Q+ +F G K++ + + Q DI VT GKG +G V RWG+
Sbjct: 164 EIRVAGGTVQQRFEFIAGLLGKEVHLKNIIQPGAYADITAVTTGKGTQGPVKRWGIKLRK 223
Query: 243 RKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
RK RG +K V +G W+P V + V + GQ G+ RTE NK+I K+G+ E
Sbjct: 224 RKHARGGKKRHVGNLGPWNPHHVRWQVPQMGQMGFQQRTEFNKRILKIGENGDE------ 277
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKL 360
I P GGF HYG++ Y+LIKG GP KR+V +R ++ + + + +
Sbjct: 278 --------ICPAGGFLHYGMLRNPYVLIKGSIPGPVKRLVRIRPAM--RQGEHVVRQPAI 327
Query: 361 KFIDTSSKFG 370
+F+ T SK G
Sbjct: 328 EFVSTESKQG 337
>gi|429216878|ref|YP_007174868.1| 50S ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
gi|429133407|gb|AFZ70419.1| archaeal ribosomal protein L3 [Caldisphaera lagunensis DSM 15908]
Length = 345
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 199/382 (52%), Gaps = 50/382 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK R GSLGF PR+RA ++K++P +P +L F+GYK GMTH+
Sbjct: 1 MGHRKKSAARRGSLGFYPRQRAVEFVPRIKSWPTLSIQEP-KLLGFIGYKVGMTHVFIIE 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYV-KTPRGLRSLCTVWAQHLNE-EVRRRF 118
+ G + KE VTI+ETPP+ V+ V GY +GL L W++ N+ E+ RR
Sbjct: 60 NRQGLPTYGKEVMRPVTIVETPPVYVLAVRGYAFDLNKGLYPLTEAWSKIPNDLELERRI 119
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKK 178
+++T+ K++Q ++K+ IRVL +Q + GL +KK
Sbjct: 120 -------------STLGEFDTEGSIKELQKSANELKE----IRVLIASQPKLTGGLSKKK 162
Query: 179 AHLMEIQVNGGS--VAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRW 236
++E++VN S V + +DFA +Q+ + VFQ ++ID++ V+KGKG++GV+ R
Sbjct: 163 PDVIEVKVNAPSNDVKKALDFAINKLGQQVTVKDVFQPGQVIDVLAVSKGKGWQGVIKRA 222
Query: 237 GVTRLPRKT-HR-GLRKVAC----IGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGK 290
G +LPR T HR G RK+ +G W + GQ G+H RT+ NK+I +G
Sbjct: 223 GAKQLPRWTKHRKGSRKIGARSHGLGTW------WENPSPGQLGFHRRTDYNKRILDIGD 276
Query: 291 ASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQT 350
+ +TP GGF +YG+V Y++++G G KR + LR +
Sbjct: 277 EGYK--------------VTPAGGFINYGIVKSSYIMLEGSIPGVVKRPIVLRYPIRPPV 322
Query: 351 SRLAL--EEIKLKFIDTSSKFG 370
L++ ++ ++ +I SSK G
Sbjct: 323 WYLSMGIKKPQITYISLSSKQG 344
>gi|448735135|ref|ZP_21717352.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
gi|445798748|gb|EMA49139.1| 50S ribosomal protein L3P [Halococcus salifodinae DSM 8989]
Length = 337
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 180/369 (48%), Gaps = 43/369 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR+RAS + ++P+ D +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRQRASSEVPRFGSWPEAD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP GLR L W + ++ R ++
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEDTPYGLRPLTETWTDEFHADLDRALDVPDGEADPD 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AF + + + D +R + HT +M + +KK +ME ++ G
Sbjct: 125 AFREAISEADIGD------------------VRAITHTVPGEMVNIPKKKPDVMETRIGG 166
Query: 189 GSVAQKVDFAYGFFE--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GS+ +V+F + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 GSLDDRVEFGLELITGGGEHNLTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 247 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ G + S
Sbjct: 227 RQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVDSGDGDEPSVD------- 279
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
GGF +YG ++ Y L+KG GP +R++ R ++ RL E ++++
Sbjct: 280 --------GGFVNYGEIDGPYALVKGSLPGPDQRLLRFRPAVRPGDQPRLDPE---VRYV 328
Query: 364 DTSSKFGHG 372
T+S G G
Sbjct: 329 STASNQGQG 337
>gi|448737862|ref|ZP_21719895.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
gi|445802824|gb|EMA53125.1| 50S ribosomal protein L3P [Halococcus thailandensis JCM 13552]
Length = 336
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 179/368 (48%), Gaps = 43/368 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y +TP GLR L W ++++ R +S
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGQSDPG 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AF + + E + IR + HT +M + +K+ +ME +V+G
Sbjct: 125 AFEEAVENNEIGE------------------IRAITHTVPGEMANVPKKRPDVMETRVSG 166
Query: 189 GSVAQKVDFAYGFFE--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
+ ++V+F + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 SDLDERVEFGLDLIAGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G
Sbjct: 227 RQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGD------------ 274
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D + GGF YG V+ Y L+KG GP +R++ R ++ RL E ++++
Sbjct: 275 ---DASAEGGFVGYGEVDGPYALVKGSLPGPDQRLLRFRPAIRPGDQPRLDPE---VRYV 328
Query: 364 DTSSKFGH 371
T+S G
Sbjct: 329 STASNQGQ 336
>gi|389860647|ref|YP_006362887.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
gi|388525551|gb|AFK50749.1| 50S ribosomal protein L3P [Thermogladius cellulolyticus 1633]
Length = 396
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 202/413 (48%), Gaps = 61/413 (14%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP-----------------KDDPSKPCRL 43
M HRK E PRHGSLG PRKRAS +V+ +P K + K L
Sbjct: 1 MGHRKLEAPRHGSLGVRPRKRASELSVRVRTWPAKTWIELLEERYGSEVEKLNVVKRPTL 60
Query: 44 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLC 103
AF YKAGMTH + ++P + L K VT ++ PP+VV+G+ YV L++
Sbjct: 61 LAFPVYKAGMTHAMVVEDRPHTPLTGKPVFTPVTALDAPPIVVLGLRTYVSENGSLKTYG 120
Query: 104 TVWAQHLNE--EVRRRFYKNWCKSKKKAFTKYTKKYET----------------DDGKKD 145
W +N EV +FYK+ K A +KY + + G K
Sbjct: 121 EAWRSPVNAVAEVFEKFYKDNPFFKDAATKDIVRKYLSGLRKVNHGLVKPDPSGEYGFKF 180
Query: 146 IQAQLE-KMKKYCT----VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYG 200
I+ E ++K+ T + ++ T I + G+ +KK + EI+V GG + + +A
Sbjct: 181 IETDYESRLKQILTGDVKAVSLIVST-IPVLSGIGKKKPEIFEIRVGGGKIDEITSYAEK 239
Query: 201 FFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAW 258
+ + VF + +++D+IGVTKGKG++GV+ R+GV LPR K +G RK IGA
Sbjct: 240 VTGGYVSVTDVFIEGQLVDVIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGAR 296
Query: 259 HPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPH 317
P + + +AGQ G+H RTE+NK+I K+G + E + P GGF H
Sbjct: 297 SPGFGTMSEPPQAGQTGFHRRTELNKRILKIGASGLE--------------VVPKGGFLH 342
Query: 318 YGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
YG++ Y+LI G +G KR + LR + + L ++ ++ SK G
Sbjct: 343 YGLIYGPYILIDGSVIGTVKRALLLRHPVRPPAGWIPLTPPQITYLSLESKQG 395
>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
Length = 342
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 185/366 (50%), Gaps = 38/366 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K P+ GS+ + PRKRA K + +P P KP L F+ YKAGM H V ++P
Sbjct: 4 KIHRPKRGSMAYYPRKRAESLVAKFRVWPDPRPGKPM-LLGFVAYKAGMAHAVFIDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
S + KE + VTI+++PP+ V+ Y P + L+ SL VW + +++ R+
Sbjct: 63 SPFYSKEVIKPVTILDSPPIKVIAFKAYTYDPWKNLKLSLGEVWMPDVPKDIARK----- 117
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+K+ ++ K I ++ T IR L TQ R + G+ +K L+
Sbjct: 118 -------IPTLPEKFNKEEMMKKILDNVD----VITEIRALVATQPR-LSGIGKKTPELL 165
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI + G + Q + +A K I + VF + + +D+ +TKGKG +GVV R+ V L
Sbjct: 166 EIPIGGVDDINQLIKYADSILGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKRFNVKIL 225
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
P+ K +G R++ IG +PA ++FT R GQ G H RTE NK+I K+G E
Sbjct: 226 PKWHKHRKGYRRIGAIGPQNPA-LAFTTPRPGQMGLHKRTEYNKRILKIGLNGAE----- 279
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
+TP GFPHYG+V Y+ ++G G KR+VTLR + + +++
Sbjct: 280 ---------VTPSSGFPHYGIVKGPYMALEGSVPGIVKRLVTLRFPVRPRPPTYPTGKVQ 330
Query: 360 LKFIDT 365
+ ++ T
Sbjct: 331 IVWLST 336
>gi|448726794|ref|ZP_21709186.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
gi|445793840|gb|EMA44411.1| 50S ribosomal protein L3P [Halococcus morrhuae DSM 1307]
Length = 336
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 117/368 (31%), Positives = 178/368 (48%), Gaps = 43/368 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ PR RA + ++P DD +P L F GYKAGM+H+V + S
Sbjct: 7 PRKGSLGYGPRTRAHSEVPRFGSWPDDD-GQPG-LQGFAGYKAGMSHVVMIDDAANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y +TP GLR L W ++++ R +S
Sbjct: 65 GMEQTVPVTVVETPPMRAVALRAYEQTPYGLRPLTETWTDEFHDDLDRALDVPDGESDPG 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
AF + + E + IR + HT +M + +K+ +ME +V G
Sbjct: 125 AFEEAVENNEIGE------------------IRAITHTVPGEMANVPKKRPDVMETRVGG 166
Query: 189 GSVAQKVDFAYGFFE--KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
+ ++V+F + + VF+ E +D GVTKGKG +G V RWGV + K
Sbjct: 167 SDLDERVEFGLDLIAGGGEHELTEVFRPGEYMDAAGVTKGKGTQGPVKRWGVQKRKGKHF 226
Query: 247 RGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G
Sbjct: 227 RQGYKRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLVSVGDGD------------ 274
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK-QTSRLALEEIKLKFI 363
D + GGF YG V+ Y L+KG GP +R++ R ++ RL E ++++
Sbjct: 275 ---DASAEGGFVGYGEVDGPYSLVKGSLPGPDQRLLRFRPAIRPGDQPRLDPE---VRYV 328
Query: 364 DTSSKFGH 371
T+S G
Sbjct: 329 STASNQGQ 336
>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
gi|109893522|sp|Q2FU91.1|RL3_METHJ RecName: Full=50S ribosomal protein L3P
gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
Length = 337
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 179/366 (48%), Gaps = 39/366 (10%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFP--KDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSK 66
PR GSL + PRKRA K A+P + +P+ L F GYK GMTH++ + S
Sbjct: 7 PRMGSLAYSPRKRAKSPVPKYHAWPAYQGEPA----LQGFAGYKVGMTHVIMVDDHAHSP 62
Query: 67 LHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
K+ VT+IE P + V + Y G L VWA ++E+ RR
Sbjct: 63 NEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTEVWADSFDKELSRRL-------- 114
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
+K Y+ ++ +K I+ LE K V L +T+ + G+ +K LME ++
Sbjct: 115 -----NLSKNYKREEAEKKIREALEADKIVDVV--ALTYTRPSVLTGVPKKVPDLMETRI 167
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
+GGS+ ++ ++ K I ++F+ + D+ +TKGKG +G V RWGV RK
Sbjct: 168 DGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVHLRKRKHS 227
Query: 247 RG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDR 304
RG R V +G W P V + V GQ GYH RTE NK++ K+G+ E
Sbjct: 228 RGKKERHVGTLGPWTPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAE---------- 277
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
ITP GGF +YG V Y+LIKG GP KR+V +R ++ + + E + FI
Sbjct: 278 ----ITPEGGFINYGEVRARYVLIKGSVPGPSKRLVRIRHAM--RLGEHKIREPTIGFIS 331
Query: 365 TSSKFG 370
SK G
Sbjct: 332 LESKQG 337
>gi|397780844|ref|YP_006545317.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
gi|396939346|emb|CCJ36601.1| 50S ribosomal protein L3P [Methanoculleus bourgensis MS2]
Length = 337
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 185/373 (49%), Gaps = 45/373 (12%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K+ PR GSL + PRKRA ++P+ + + F GYK GMTH+V +
Sbjct: 3 KYNRPRRGSLAYSPRKRAKSPVPGYGSWPEY--TGVPTVQGFAGYKVGMTHVVMVDDHKS 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S K+ VT++E PP+ V GV Y + G +L W L+EE+ RR
Sbjct: 61 SPTEGKDVMVPVTVVEVPPMRVAGVRAYCEDTYGKHALTEAWTTDLDEELSRRI------ 114
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKY-----CTVIRVLAHTQIRKMKGLKQKKA 179
T D A L+ ++K T + + +TQ + G+ +K
Sbjct: 115 --------------TIPKNHDTVAALDAIRKAIGEGRVTELYAITYTQPDALTGVPKKVP 160
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
LME+++ GGS+ ++++A G K+I I F+ E ID+ VT GKG EG V RWGV
Sbjct: 161 DLMEMRIAGGSLDDQIEYAAGILGKEIEITGNFEAGEYIDVTAVTTGKGTEGPVKRWGVQ 220
Query: 240 RLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHS 297
RK RG +K + +G WHP V + V + GQ GY RTE NK+I K+G
Sbjct: 221 VRKRKHSRGGKKRHIGNLGPWHPHHVRWQVPQIGQMGYQQRTEFNKRILKIG-------- 272
Query: 298 AMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
T D DITP GGF HYGVV Y+LIKG GP KR+V +R + ++Q + L
Sbjct: 273 --TNGD----DITPAGGFLHYGVVRGPYVLIKGSVPGPNKRLVRIRPA-IRQGEHI-LRT 324
Query: 358 IKLKFIDTSSKFG 370
+ F+ T SK G
Sbjct: 325 PAISFVSTESKQG 337
>gi|305662572|ref|YP_003858860.1| 50S ribosomal protein L3 [Ignisphaera aggregans DSM 17230]
gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
Length = 340
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 200/378 (52%), Gaps = 46/378 (12%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M+HRK P+ GSLG PRKRAS VK++P+ KP L F+GYK GMTH++
Sbjct: 1 MAHRKTHAPKRGSLGLRPRKRASEIIPTVKSWPEISLDKPLPL-GFIGYKVGMTHVIMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNE-EVRRRF 118
++PGS KE VTIIETPP++ + + Y K G L+ +W + E E+ RR
Sbjct: 60 DRPGSPTEGKEIFMPVTIIETPPIIPIALRTYTKDSLGYLKVFTDIWIEPPKELEIWRRV 119
Query: 119 YKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIR---VLAHTQIRKMKGLK 175
T + +DI+ ++E +++ +I+ ++ T + + GL
Sbjct: 120 V-------------------TYNPTRDIEKRIEMIERNIDIIKRVSIIVATNPKNVGGLS 160
Query: 176 QKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTR 235
+K + EI + G S+ ++ +AY K I I+ VF + IDIIGVTKGKG++GV+ R
Sbjct: 161 KKVPDIAEIAIGGSSINERFKYAYEVLGKPIHINQVFNVGQFIDIIGVTKGKGFQGVIKR 220
Query: 236 WGVTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKAS 292
+GV LPR K +G R+ IG+ P + + +AGQ G+H RTE NK+I +G
Sbjct: 221 FGVKELPRWHKHRKGSRR---IGSRSPTIGAMSETPQAGQMGFHRRTEYNKRILAMGDKG 277
Query: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352
+E ITP GGFPHYG+V +++++G +G KR + LR ++ S
Sbjct: 278 EE--------------ITPSGGFPHYGIVKSMWIMVQGSTIGVPKRPLILRWP-IRPPSW 322
Query: 353 LALEEIKLKFIDTSSKFG 370
+ +++I SK G
Sbjct: 323 IPKGAPLIRYISLESKIG 340
>gi|297527410|ref|YP_003669434.1| 50S ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
Length = 395
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/414 (32%), Positives = 208/414 (50%), Gaps = 64/414 (15%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP------------------KDDPSKPCR 42
M HRK PRHGSLG PRKRA++ +++++P K KP
Sbjct: 1 MGHRKHSAPRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEATDKGISPKPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRS 101
L + YKAGM+H + ++P + KE VTI++ PP++++G+ GY P GL S
Sbjct: 60 LLGYAAYKAGMSHAIIIDDRPHTFTSGKEIAVPVTILDAPPILILGIRGYKIHPMHGLLS 119
Query: 102 LCTVWAQHLN--EEVRRRFYKN--------------WCKSKKKAFTKYTKKYETDDG--- 142
VW + +EV + Y + + K +K K ++
Sbjct: 120 FGEVWRSPVEALKEVYEKIYSDNPFVNLGIKDVVRKYLKGLRKVNPGLVKPDPNNEYGFK 179
Query: 143 --KKDIQAQLEKMKKY-CTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAY 199
+ + + +L+++K IRV+A T I + G+ +KK ++EI+V GG++ ++ +A
Sbjct: 180 FLENNWEEKLQRLKAADLADIRVIAST-IPVLSGIGKKKPEIIEIKVGGGTLNDRIAYAE 238
Query: 200 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 257
I +D VF++ + IDIIGVTKGKG++GV+ R+GV LPR K +G RK IG+
Sbjct: 239 KLLGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRK---IGS 295
Query: 258 WHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFP 316
P + + + GQ G+H RTE NK+I K+G E ITP GGF
Sbjct: 296 RSPGFGTMSETPQPGQTGFHRRTEYNKRIIKIGVNGWE--------------ITPKGGFL 341
Query: 317 HYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
YG+V Y+++ G +GP+KR++ LR ++ LE +L + SK G
Sbjct: 342 GYGIVYGPYIMVYGSTIGPRKRLLVLRHP-IRPPLWYPLEAPQLIYYSHESKQG 394
>gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
gi|109893521|sp|Q46G95.1|RL3_METBF RecName: Full=50S ribosomal protein L3P
gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
Length = 337
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 172/352 (48%), Gaps = 33/352 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
P+ GSL F PRKRA H + +A+P + + RL F GYK GMTH++ + S
Sbjct: 7 PKRGSLAFSPRKRAKSHIPRFRAWP--EATGEPRLQGFAGYKVGMTHVIMVDDTKNSLTQ 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VTIIETP + V + Y + G +++ VWA L+ E++RR + +
Sbjct: 65 GMEISVPVTIIETPAIRVAAIRAYAEDTAGEKAIAEVWATDLDPELKRRIPVPKGDNMAE 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K E +GK + IR + +T + + G+ +K +ME ++
Sbjct: 125 TLGNIGKMIE--EGK-------------VSDIRAVTYTLPKSLTGVPKKTPDIMESGISA 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR- 247
+ K ++A + I VF+ +ID +T GKG +G RWG+ + K R
Sbjct: 170 RDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPAKRWGIQLMKGKHSRQ 229
Query: 248 -GLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
LR++ +G + RVS+ V + GQ GYH RTE NK+I K+G +E
Sbjct: 230 GSLRQIGTLGGFGLRRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
+TP GGF +YG+V DY+LIKG GP KR++ LR + + + L I
Sbjct: 278 --VTPEGGFINYGLVRGDYVLIKGSVPGPSKRLIRLRDPIRAKKADLGEPNI 327
>gi|414588496|tpg|DAA39067.1| TPA: hypothetical protein ZEAMMB73_537924, partial [Zea mays]
Length = 124
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/103 (82%), Positives = 94/103 (91%)
Query: 64 GSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWC 123
S+LHKKETCEAVTIIETPPLV+VG+V YVKTPRGLR+L +VWAQHL+EEVRRRFYKNWC
Sbjct: 22 SSELHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWC 81
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHT 166
KSKKKAFTKY KYE D GKK+IQ QLEKMKKY +VIRV+AHT
Sbjct: 82 KSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVIAHT 124
>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
Length = 396
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 205/417 (49%), Gaps = 69/417 (16%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
M HRK PRHGSLG PRKRA +VK +P+ ++P
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEAASQGVVARPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
L F YKAGMTH + ++P + + KE VTI++ PP+VV+GV Y+ G L++
Sbjct: 60 LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119
Query: 102 LCTVW-------AQHLNE-------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
W A+ E +V R++ N K + ++Y K
Sbjct: 120 KGEAWRSPYDAIAKAFEELYAGIPLIGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGFK 179
Query: 137 YETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVD 196
+ + + +++ + + +RV+A T I + G+ +KK ++E+++ GGS+ +++
Sbjct: 180 FVAESSESELR---DALSGEIADVRVIAST-IPVLSGIGKKKPEIIELKIGGGSIDERLK 235
Query: 197 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 254
+A G + VF + + +D+IGVTKGKG++GVV R+GV LPR K +G RK
Sbjct: 236 YAEGILGGYVRASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK--- 292
Query: 255 IGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
IGA P + + +AGQ G+H RTE NK+I K+G E IT G
Sbjct: 293 IGARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLE--------------ITIEG 338
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
GF HYG+V Y+++KG GP KR++ LR + L L K+ ++ SK G
Sbjct: 339 GFLHYGLVYGPYIMLKGTVFGPAKRMLILRHPIRPNLRWLPLSGPKIAYLSLESKQG 395
>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
Length = 342
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 187/371 (50%), Gaps = 38/371 (10%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K P+ GS+ + PRKRA + + +P P KP L F YKAGM H V ++P
Sbjct: 4 KIHRPKRGSMAYYPRKRAESLVARFRVWPDPHPGKPI-LLGFAAYKAGMAHAVVIDDRPT 62
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLR-SLCTVWAQHLNEEVRRRFYKNW 122
S + KE + VTI++ PP+ V+ Y P + L+ SL VW + +++ R+
Sbjct: 63 SPFYGKEVVKPVTILDAPPIKVIAFRAYTYDPWKNLKLSLGEVWMPDVPKDILRKI---- 118
Query: 123 CKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+K+ ++ K I ++ T +R + TQ R + G+ +K ++
Sbjct: 119 --------PVLPEKFNKEEMMKKILDNVD----VITEVRAIVATQPR-LSGIGKKTPEIL 165
Query: 183 EIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL 241
EI + G + Q + FA K I I+ VF + + +D+ +TKGKG++GVV R+ V L
Sbjct: 166 EIPIGGVDDMNQIIKFADSILGKDININDVFSEGQYVDVAAITKGKGWQGVVKRFNVKIL 225
Query: 242 PR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
P+ K +G R++ IG +PA ++FT R GQ G H RTE NK+I ++G E
Sbjct: 226 PKWHKHRKGYRRIGAIGPQNPA-LTFTTPRPGQMGLHKRTEYNKRILRIGMNGAE----- 279
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK 359
+TP GFPHYG++ Y++++G G KR+VTLR + + +++
Sbjct: 280 ---------VTPSSGFPHYGIIKGPYIVLEGTVPGVVKRLVTLRFPVRPRPPTYPTGKVQ 330
Query: 360 LKFIDTSSKFG 370
+ ++ T G
Sbjct: 331 IVWLSTQPLQG 341
>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
gi|172046889|sp|A4YCW6.1|RL3_METS5 RecName: Full=50S ribosomal protein L3P
gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
Length = 341
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 191/376 (50%), Gaps = 41/376 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR GS G PRKR+ +++P+ + P L F+GYK GMTHI
Sbjct: 1 MGHRKLSSPRRGSAGLRPRKRSEELLPSPRSYPEVNLPNPVTL-GFVGYKVGMTHIFMID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRS-LCTVWAQ--HLNEEVRRR 117
E S + KE VT++ETPP+ V+ + Y RG S + VW + + RR
Sbjct: 60 EDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHSVMGEVWGDLGDFGKFITRR 119
Query: 118 FYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
+KK + KDI++ LE + + R+L TQ + L +K
Sbjct: 120 IRGLKIDKEKK-----------EHQLKDIESNLESVSYF----RLLVSTQPHLIPALGKK 164
Query: 178 KAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 237
++E+Q+ GG+ ++++ + + VF++ +++DIIGVTKG G++GV+ R+G
Sbjct: 165 TPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRYG 224
Query: 238 VTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQE 294
V LPR K +G RKV G P+ + + V + GQ G+H RTE NK+I K+ +
Sbjct: 225 VQELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQMGFHRRTEYNKRILKISDDT-- 279
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
K I P GGF YG+V YLL++G +G KR + LR + +++L
Sbjct: 280 ------------KLINPKGGFVRYGLVKNTYLLVQGSTIGSIKRPLFLRYPIRPYSAQLP 327
Query: 355 LEEIKLKFIDTSSKFG 370
+ K+ ++D +SK G
Sbjct: 328 VP--KVTYVDVNSKQG 341
>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
Length = 395
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 205/414 (49%), Gaps = 64/414 (15%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFP-------------KDDP-----SKPCR 42
M HRK PR GSLG PRKRA +V+ +P KD SKP
Sbjct: 1 MGHRKLHAPRRGSLGVRPRKRAEELTPRVRTWPAKTWAELLLEKYGKDAEKHGVVSKPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGY-VKTPRGLRS 101
L F YKAGMTH + ++P + KE VTI++ PP+V++G+ Y V GL S
Sbjct: 60 LLGFAAYKAGMTHALMVEDRPNTPFTGKEVFTPVTILDAPPMVILGLRAYSVGEQGGLVS 119
Query: 102 LCTVW---AQHLNEEVRRRFYKNWCKSKK-----KAFTKYTKKYETDDGKKDIQAQL--- 150
L W + + + + KN +++ + + + +K K D +
Sbjct: 120 LGEAWRSPVEAVGKAYEEYYSKNPLLTERVDSVVRKYLQGLRKLNHGLVKPDPTGKYGFK 179
Query: 151 -------EKMKKYCT----VIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAY 199
E KK T +R LA T I + G +KK ++EI++ GG V + V +
Sbjct: 180 FVETNWEEAFKKVFTGNVVEVRALAST-IPVLSGFAKKKPEIVEIKIGGGKVEEIVKYGE 238
Query: 200 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGA 257
+ + VF + + ID+IGVTKGKG++GVV R+GV LPR K +G RK IG+
Sbjct: 239 SVLGGLVTVRDVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGARK---IGS 295
Query: 258 WHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFP 316
PA + + +AGQ G+H RT+ NK+I ++G F+ E +TP GGF
Sbjct: 296 RSPAFGTMSEPPQAGQTGFHRRTDYNKRILRIG------------FNGLE--VTPSGGFL 341
Query: 317 HYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
HYG+V YL++KG GP KR++ LR ++ + L LE K+ +++ SK G
Sbjct: 342 HYGLVYGPYLMLKGTVFGPAKRLLILRHP-VRPPTWLPLESPKITYLNLESKQG 394
>gi|390938993|ref|YP_006402731.1| 50S ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
gi|390192100|gb|AFL67156.1| ribosomal protein L3 [Desulfurococcus fermentans DSM 16532]
Length = 396
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 205/417 (49%), Gaps = 69/417 (16%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
M HRK PRHGSLG PRKRA +VK +P+ ++P
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVKRWPEKSWFDILVERLGNEATSQGVVARPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
L F YKAGMTH + ++P + + KE VTI++ PP+VV+GV Y+ G L++
Sbjct: 60 LLGFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGYLKT 119
Query: 102 LCTVW-------AQHLNE-------------EVRRRFYK-----NWCKSKKKAFTKYTKK 136
W A+ E +V R++ N K + ++Y K
Sbjct: 120 KGEAWRSPHDAVAKAFEELYAGIPLMGISVKDVVRKYLHGLRKVNHGLVKPEPSSEYGFK 179
Query: 137 YETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVD 196
+ + + +++ + + +RV+A T I + G+ +KK ++E+++ GGS+ +++
Sbjct: 180 FVAESSESELR---DALSGEIADVRVIAST-IPVLSGIGKKKPEIIELKIGGGSIDERLK 235
Query: 197 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 254
+A G + VF + + +D+IGVTKGKG++GVV R+GV LPR K +G RK
Sbjct: 236 YAEGILGGYVKASDVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK--- 292
Query: 255 IGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
IGA P + + +AGQ G+H RTE NK+I K+G E+ T G
Sbjct: 293 IGARSPGFGTMSEPPQAGQMGFHRRTEYNKRILKMGLNGLET--------------TIEG 338
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
GF HYG+V Y+++KG GP KR++ LR + L L K+ ++ SK G
Sbjct: 339 GFLHYGLVYGPYIMLKGTVFGPAKRMLILRHPIRPNLRWLPLSGPKIAYLSLESKQG 395
>gi|154343493|ref|XP_001567692.1| putative ribosomal protein L3, partial [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065024|emb|CAM43136.1| putative ribosomal protein L3, partial [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 131
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/131 (62%), Positives = 107/131 (81%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++PGSK++KKE E VTI+E PP+VVVG+VGY +TP GL+++ TVWA H + E RRR+YK
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGLKTMGTVWAHHTSVEFRRRYYK 120
Query: 121 NWCKSKKKAFT 131
NW +S + AF+
Sbjct: 121 NWKQSAQLAFS 131
>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
Length = 396
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 200/417 (47%), Gaps = 69/417 (16%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDD------------------PSKPCR 42
M HRK PRHGSLG PRKRA +V+ +P+ +KP
Sbjct: 1 MGHRKLHAPRHGSLGVRPRKRAEELTPRVRRWPEKSWFDIVVERLGSEAASRGIAAKPV- 59
Query: 43 LTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRS 101
L F YKAGMTH V ++P + + KE VTI++ PP+VV+GV YV G L++
Sbjct: 60 LLGFPVYKAGMTHAVVVEDRPNTPVSGKEVFTPVTILDAPPIVVLGVRTYVVGEDGYLKA 119
Query: 102 LCTVWAQHLN---------------------EEVRRRFYK----NWCKSKKKAFTKYTKK 136
W ++ + VR+ Y N K +Y K
Sbjct: 120 KGEAWRSPVDAVLKAYEELYAGNPLFNMNGRDVVRKYLYGLRRLNHGLVKPDPSGEYGFK 179
Query: 137 YETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVD 196
+ + G+K+++ E +RV+A T I G+ +KK ++E+++ GGS+ +++
Sbjct: 180 FIAESGEKEVK---EVFSGEVADVRVIAST-IPVFSGIGKKKPEIVELKIGGGSIDERLR 235
Query: 197 FAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVAC 254
+ + VF + + ID+IGVTKGKG++GVV R+GV LPR K +G RK
Sbjct: 236 YGESILGGYVKAADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRK--- 292
Query: 255 IGAWHPARVSFT-VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
IGA P + + +AGQ G+H RTE NK+I ++G E+ T G
Sbjct: 293 IGARSPGFGTMSEPPQAGQMGFHRRTEYNKRILRIGLNGLEA--------------TVEG 338
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
GF HYG+V YL++KG GP KR++ LR + L L ++ ++ SK G
Sbjct: 339 GFLHYGLVYGPYLMLKGTVFGPAKRMLILRHPVRPHLEWLPLSGPRIVYLSLESKQG 395
>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 348
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 188/364 (51%), Gaps = 24/364 (6%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+G+ PRKR R ++ ++P+ + S+ R+ F G+KAGMTHI+ P S +E
Sbjct: 1 MGYGPRKRTVRQYPRITSWPETEASE-VRVQGFAGWKAGMTHILMRDTNPKSTSAGQEVR 59
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
+AVT++E PP+ V+ V GY TP G ++ VW E F + +++ + +
Sbjct: 60 KAVTVVEAPPMTVLAVRGYRMTPYGKQTAGEVWTDVSEESPTNLFPRLANQTRGERDEEQ 119
Query: 134 TKKYETDDGK------KDIQAQLEKMKKY-CTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
+K G+ K ++ +++ + +R++ TQ ++ + K +ME+ +
Sbjct: 120 GRKPAKRGGRIPKRPSKPLEEAANSLRQQDLSEVRLIVCTQPESVRSVPSKTPEIMEMGL 179
Query: 187 NGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTH 246
GG + K+++A +I I+ V+ + +D++GVTKGKG++G + R+G+ L K
Sbjct: 180 TGGDIEAKLEWALERLGGEIGIEDVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLLSHKNS 239
Query: 247 RGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+ R+ +G + V T+ +AGQ GYH RTE+NKKI ++ E
Sbjct: 240 KRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKKILRISNPE-------------E 286
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
+ITP GGF +YG V Y++I+G GP KR++ R R E+ + ++ TS
Sbjct: 287 SEITPAGGFLNYGEVTNPYMIIQGSLPGPAKRLIRFRDPT---RPRKIPGEVDVTYVSTS 343
Query: 367 SKFG 370
SK G
Sbjct: 344 SKQG 347
>gi|444706378|gb|ELW47720.1| 60S ribosomal protein L3 [Tupaia chinensis]
Length = 197
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 117/152 (76%), Gaps = 2/152 (1%)
Query: 82 PPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDD 141
PP VV+G+VG+V+TPRGLR+ T+ A+ +++E +R FYKNW KSKK AFTKY K ++ D+
Sbjct: 2 PPTVVMGIVGHVETPRGLRTFRTLLAERISDECKRFFYKNWHKSKK-AFTKYCKNWQDDN 60
Query: 142 GKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGF 201
GKK ++ MK YC VIR++AHTQ+R + L QKKAHLMEIQVNGG+VA+K+D+
Sbjct: 61 GKKQVEKDFSSMKMYCQVIRIIAHTQMRLLP-LCQKKAHLMEIQVNGGTVAEKLDWVLEQ 119
Query: 202 FEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVV 233
E+++P++ VF +DEMID +GV KGKGY G +
Sbjct: 120 LEQRVPVNQVFGQDEMIDAMGVIKGKGYRGTI 151
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 350 TSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
T R ALE+I LKFI T+SK GHG FQ+ +EK + G LK
Sbjct: 150 TIRQALEKIDLKFIGTASKLGHGHFQSVEEKKAFMGPLK 188
>gi|395502503|ref|XP_003755619.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like
[Sarcophilus harrisii]
Length = 358
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 204/389 (52%), Gaps = 53/389 (13%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MS+ KF P+HG FLP+K ++ KDD K LT F+GYK +T I R+V
Sbjct: 1 MSYWKFFTPKHG---FLPQK--------IELKVKDDHIKLIHLTDFMGYKTDITXITREV 49
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ SK++KKE VTI+E ++++ T++A+ + K
Sbjct: 50 DRMDSKVNKKEVVWMVTIVEMSLMIII----------------TIFAELM--------MK 85
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
NW KSK+K Y K +E D KK ++ +KKYC VI + AHTQ+ + L+QKK
Sbjct: 86 NWHKSKEKXCKYYKKWWEV-DSKKXLKKNFNNIKKYCQVIXLAAHTQMLLLP-LRQKKPE 143
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+M+IQV V K+++ +Q+P VF +D+M DI VTK GY+ V + +
Sbjct: 144 IMKIQV---XVTDKLEWTCEXMGQQVP---VFGQDKMTDISEVTKINGYKDVASCCHTKK 197
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ------E 294
L KT +GL K+ C F++A+AGQ G + + +NKKI+K+G
Sbjct: 198 LSEKTLQGLHKLICTDFDTVTIXVFSLAQAGQMGCSYXSNINKKIHKIGXGYXIKFEKLI 257
Query: 295 SHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLA 354
+A T+ D ++K+I +GGF H V D ++ K C VG KK V+ L + LL T A
Sbjct: 258 KSNASTDXDLSDKNINHLGGFVHXSEVINDLIIQKVCVVGTKKHVLILXKFLLSXTKSHA 317
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
LE KFI +SKFGH +F +EK +
Sbjct: 318 LE----KFISITSKFGHXQFXNEEEKKSF 342
>gi|359416216|ref|ZP_09208568.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
gi|358033419|gb|EHK01972.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
Length = 323
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 172/340 (50%), Gaps = 37/340 (10%)
Query: 10 RHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHK 69
R GSL + P+ RA R + + D KP + GYK GMT ++R V+
Sbjct: 8 RSGSLAYKPKVRADRIYPDINTWEDTDELKPL---GYAGYKVGMTRVLR-VDDTEGATKG 63
Query: 70 KETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKA 129
+E + VTI+E PPL V G Y + P + E+V F + W +S K
Sbjct: 64 QEVADPVTILEAPPLRVYGARFYTEDP------------NSGEQV---FTEAWTESPSKE 108
Query: 130 FTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGG 189
+ T +G D + + + T +++L HTQ + GL +KK E+ + GG
Sbjct: 109 LQRATDI--PKEGNLDNMEKAKDNSESLTDVKLLVHTQPSRA-GLSKKKPANFELGL-GG 164
Query: 190 SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGL 249
SV + +++A K+I VF+ E D++ VTKGKG EG V R+G+ +L KT +
Sbjct: 165 SVEEILEYAEEMIGKEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQKKR 224
Query: 250 RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDI 309
RK +G WHP ++S+ + GQ G+++RTE+NK+I G+ +E +
Sbjct: 225 RKAGNVGPWHPDQLSWRIPLPGQQGFNNRTEINKRILDFGEDPEE--------------V 270
Query: 310 TPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQ 349
GGF +YG VN +Y+LIKG GP +R+V LR +L K
Sbjct: 271 QKEGGFKNYGEVNSNYILIKGSVPGPSERLVRLRTALRKD 310
>gi|449707707|gb|EMD47318.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 168
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 114/168 (67%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ +KL K E VTIIETPP+VV G VGY KT GL+ + V+A+H+ +E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQI 168
W K+ K F +T+KY K + Q+ +K C V+RV+AHTQ+
Sbjct: 121 KWYKNTKNQFAVHTEKYNDVKAKSKRERQIRLIKNRCDVVRVIAHTQM 168
>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484512|dbj|BAJ50166.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
Length = 320
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 171/343 (49%), Gaps = 42/343 (12%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK+ PRHGSL +LPR RA+ +VK +P + + F+GYK GMT +
Sbjct: 1 MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
P S E +A T++ PPL V+G+ Y L ++ W++ + E+V+RR
Sbjct: 56 NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
F E + D+ +R++ TQ R + K +
Sbjct: 113 ------NPTFRPMPSAEEIGQLEDDVDE-----------VRIVVATQPRLVGAGKAPR-- 153
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EI++ GG A+ ++ A K + + VF++ + +D+I VTKGKG++GVV R+GV+
Sbjct: 154 IAEIKI-GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSI 212
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L RK+ + R VA IG W+P V +TV R+GQ GYH RTE NK+I ++G
Sbjct: 213 LQRKSRKTRRGVAAIGPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIGD---------- 262
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLR 343
I P G+ +G+V DYL+++G G R + LR
Sbjct: 263 ----DPASINPKSGWHRFGLVKSDYLVLEGSVAGTPLRPLVLR 301
>gi|393796608|ref|ZP_10379972.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia BG20]
Length = 330
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 180/346 (52%), Gaps = 33/346 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK+ PR GS + PR RA +++ +P ++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ + K+ T++ TPP+ ++G+ GY K GL + V+A + + +
Sbjct: 60 DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
K+K+ A ++ + L ++K+ ++ V + GL+QKK +
Sbjct: 119 --LKNKEGAL-------------ENAEKILGRVKEIFAIVAVSP-----RAAGLEQKKPY 158
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V+GG V ++ K+I ID +F+ ID+ +TKGKG++GV+ R+GV +
Sbjct: 159 IFEALVSGGDVKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKK 218
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R+VA +G PA V ++V RAGQ G+H RTE +KKI +G
Sbjct: 219 KQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIGNT--------- 269
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ + I P GG+ H+G+V D++++KG G +R++ LR +
Sbjct: 270 --ENNQIKINPDGGYKHFGLVKGDFIILKGSVPGTYRRLIKLRSQI 313
>gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1]
gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1]
Length = 331
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 180/346 (52%), Gaps = 32/346 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK PR GSL + PR RA +++A+PK D +P ++ A G+KAG IV
Sbjct: 1 MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ K+ T++ TPP++++G+ GY K GL + V+A+ + + + +
Sbjct: 60 DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEI-- 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ K + ++ + + L+K+K+ ++ + GL+QKK +
Sbjct: 118 -------------SLKNKQENALDNAEKSLKKIKEIFAIVAISPSAA-----GLEQKKPY 159
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V+GG + ++ K+I ID +F+ +D+ +TKGKG++GV+ RW V +
Sbjct: 160 IFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKK 219
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R+V +G P V +TV RAGQ G+H R E +K+I +G T
Sbjct: 220 KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRVEYDKRIMIMGN---------T 270
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ D+ + I P GGF H+G+V D++++KG G +R++ LR +
Sbjct: 271 DDDKLK--INPDGGFKHFGLVKGDFIVLKGSVPGAYRRLIKLRSQI 314
>gi|407462403|ref|YP_006773720.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
gi|407046025|gb|AFS80778.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus koreensis AR1]
Length = 331
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 180/346 (52%), Gaps = 32/346 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK PR GSL + PR RA +++A+PK D +P ++ A G+KAG IV
Sbjct: 1 MGARKRHSPRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ K+ T++ TPP++++G+ GY K GL + V+A+ + + + +
Sbjct: 60 DREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKNIAKEI-- 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+ K + ++ + + L+K+K+ ++ V GL+QKK +
Sbjct: 118 -------------SLKNKQENALDNAEKSLKKIKEIFAIVAVSPSAA-----GLEQKKPY 159
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V+GG + ++ K+I ID +F+ +D+ +TKGKG++GV+ RW V +
Sbjct: 160 VFEASVSGGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKK 219
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R+V +G P V +TV RAGQ G+H R E +K+I +G T
Sbjct: 220 KQHKSRKTVREVGSLGPISPQSVMYTVPRAGQFGFHQRIEYDKRIMIMGN---------T 270
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
E D+ + I P GG+ H+G+V D++++KG G +R++ LR +
Sbjct: 271 EEDKLK--INPDGGYKHFGLVKGDFIILKGSVPGTYRRLIKLRSQI 314
>gi|340344791|ref|ZP_08667923.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519932|gb|EGP93655.1| 50S ribosomal protein L3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 330
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 33/346 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK+ PR GS + PR RA +++ +PK++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPKNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ + K+ T++ TPP+ ++GV GY K GL + V+A+ + + +
Sbjct: 60 DREKTPNAGKQLVSLGTVLVTPPVSILGVRGYSKDHYGLHAEFDVYAKEFPKNISKEI-- 117
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
N+ K+K+ A ++ + L ++K+ ++ V GL+QKK +
Sbjct: 118 NF-KNKEGAM-------------ENAEKILGRVKEIFAIVAVSPRDA-----GLEQKKPY 158
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V+GG + ++ K+I ID +F+ ID+ +TKGKG++GV+ R+GV +
Sbjct: 159 IFEALVSGGDIKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKK 218
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R+VA +G PA V ++V RAGQ G+H RTE +K+I +G
Sbjct: 219 KQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKRIMVIGNT--------- 269
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ + I P GG+ H+G+V D++++KG G +R++ LR +
Sbjct: 270 --ENNQIKINPDGGYKHFGLVKGDFIILKGSVPGTYRRLIKLRSQI 313
>gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 330
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 180/346 (52%), Gaps = 33/346 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK+ PR GS + PR RA +++ +P ++ +P ++ A G+KAG +V
Sbjct: 1 MGHRKYAQPRRGSAAYYPRGRAKSMEARIRTWPTNNSDEP-KILAHCGFKAGCVQLVTID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ + K+ T++ TPP+ ++G+ GY K GL + V+A + + +
Sbjct: 60 DRDKTPNAGKQLVSLGTVLVTPPVSILGIRGYSKDHYGLHAEFDVYANEFPKSISKEIN- 118
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
K+K+ A ++ + L ++K+ ++ V + GL+QKK +
Sbjct: 119 --LKNKEGAL-------------ENAEKILGRVKEIFAIVAVSP-----RAAGLEQKKPY 158
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V+GG + ++ K+I ID +F+ ID+ +TKGKG++GV+ R+GV +
Sbjct: 159 IFEALVSGGDIKKQFAHVKELLGKEIKIDQIFETGATIDVAAITKGKGWQGVIQRFGVKK 218
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R+VA +G PA V ++V RAGQ G+H RTE +KKI +G
Sbjct: 219 KQHKSRKTVREVASLGPISPASVMYSVPRAGQMGFHQRTEYDKKIMVIGNT--------- 269
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ + I P GG+ H+G+V D++++KG G +R++ LR +
Sbjct: 270 --ENNQIKINPDGGYKHFGLVKGDFIILKGSVPGTYRRLIKLRSQI 313
>gi|347970124|ref|XP_003436525.1| AGAP003556-PB [Anopheles gambiae str. PEST]
gi|333468789|gb|EGK97067.1| AGAP003556-PB [Anopheles gambiae str. PEST]
Length = 123
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 96/112 (85%), Gaps = 1/112 (0%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+ F P+KRASRH+G+VKAFPKDD SKP LTAFL YKAGMTHIVR+ ++PGSK++KKE
Sbjct: 1 MAFYPKKRASRHQGRVKAFPKDDASKPVHLTAFLAYKAGMTHIVREADRPGSKINKKEVV 60
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKS 125
EAVTI+ETPPLVVVG VGY++TP G R+LC VWAQHL+EE RRRFYKN C S
Sbjct: 61 EAVTILETPPLVVVGAVGYIETPFGPRALCNVWAQHLSEECRRRFYKN-CPS 111
>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
gi|42559695|sp|Q9HPD4.3|RL3_HALSA RecName: Full=50S ribosomal protein L3P
gi|226725182|sp|B0R656.1|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
gi|167727437|emb|CAP14225.1| 50S ribosomal protein L3 [Halobacterium salinarum R1]
Length = 335
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 180/368 (48%), Gaps = 45/368 (12%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA + ++P DD L F GYKAGMTH+V +K +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
ET VT++ETPP+ V Y TP G + L VWA +E + R
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHESLDRTL---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
D D +E + + IRV+ HT G+ +K +ME +V
Sbjct: 115 ---------SVPDEGGDTDELIEALDTEEIADIRVITHTVPGDTAGVPKKNPDVMETRVG 165
Query: 188 GGSVAQKVDFAYGFFEKQI--PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GG++A +++FA E VF+ E D G+TKGKG +G V RWGV + K
Sbjct: 166 GGTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKH 225
Query: 246 HRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
R R++ +G W+P+RV TV + GQ GYH RTE+NK++ + +
Sbjct: 226 ARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEP--------- 276
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL-LKQTSRLALEEIKLKF 362
TP GGFP+YG V+ Y L+KG GP++R+V R ++ ++ RL E +++
Sbjct: 277 ------TPDGGFPNYGEVDGPYTLVKGSVPGPEQRLVRFRPAVRPNESPRLDPE---VRY 327
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 328 VSTASNQG 335
>gi|385804241|ref|YP_005840641.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
gi|339729733|emb|CCC41011.1| 50S ribosomal protein L3 [Haloquadratum walsbyi C23]
Length = 338
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 42/368 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA +++++ +D P + F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP G + L VW + + + R + +
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
ET D +R++ HT M+ + +K +ME +V G
Sbjct: 125 DAAALRDDAETGD---------------IDDVRLITHTLPAGMRNIPKKTPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----P 242
G++ +V+F + I +F+ E +D GVTKGKG +G V R+GV +
Sbjct: 170 GTLTDRVEFGLNLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHA 229
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R+ +R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G ++ +
Sbjct: 230 RQGYR--RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGNEPTVD----- 282
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
GGF YG V+ Y LIKG GP +R++ R ++ + S + ++++
Sbjct: 283 ----------GGFVGYGEVDGPYALIKGSLPGPDQRLLRFRTAV--RPSDQPRLDPEVRY 330
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 331 VSTASNQG 338
>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
gi|42559579|sp|P60458.1|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
Length = 321
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 187/360 (51%), Gaps = 48/360 (13%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRASR ++K +PK + KP AF YK GMTH + ++ +
Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTILNI-------N 58
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+ VT++E P L+V+G Y K L+ + +++ L + V R+ K
Sbjct: 59 GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K Y ++ K+ ++ + + ++++ TQ K+K +K + +I + G
Sbjct: 111 -----LKNYNFEEKKEQFLSKADNADE----VKIIVSTQPWKIK--LKKTPEIFDIPIGG 159
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
V +K+++A K++ I+ VF++ + +D+I VTKGKG++GV+ R+ V R K+ +G
Sbjct: 160 SDVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQHKSEKG 219
Query: 249 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
+RKV IG+ P R+ TV GQ GYH RTE NK I K+G+
Sbjct: 220 VRKVGAIGSRGPGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEP----------------- 262
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSK 368
+ GG+ YG V +L+KG GP+KR++ LR+++ + +E I ++I S K
Sbjct: 263 LNVEGGWVRYGQVIGPTILLKGSVPGPRKRLIILREAIRPPRKQEKVEGI--EYISLSPK 320
>gi|3642669|gb|AAC36524.1| ribosomal protein L3, partial [Mus musculus]
Length = 117
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 96/108 (88%)
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
IQVNGG+VA+K+D+A E+Q+P++ VF +DEMID+IGVTKGKGY+GV +RW +LPR
Sbjct: 1 IQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPR 60
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA 291
KTHRGLRKVACIGAWHPARV+F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 61 KTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGQG 108
>gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790]
gi|121692171|sp|Q18GE9.1|RL3_HALWD RecName: Full=50S ribosomal protein L3P
gi|109626488|emb|CAJ52949.1| 50S ribosomal protein L3 [Haloquadratum walsbyi DSM 16790]
Length = 338
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 179/368 (48%), Gaps = 42/368 (11%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GS+GF PRKRA +++++ +D P + F GYKAGMT ++ ++ S
Sbjct: 7 PRKGSMGFSPRKRAESEVPRIRSWASND-GAPG-VQGFAGYKAGMTQVLMVNDEANSPRE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E VT++ETPP+ V + Y TP G + L VW + + + R + +
Sbjct: 65 GMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTEVWGREFDTSLERTLDLPNEDTFED 124
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
ET D +R++ HT M+ + +K +ME +V G
Sbjct: 125 DAAALRDDAETGD---------------IDDVRLITHTLPAGMRNIPKKTPDVMETRVGG 169
Query: 189 GSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRL----P 242
G++ +V+F + I +F+ E +D GVTKGKG +G V R+GV +
Sbjct: 170 GTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFGVQKRKGKHA 229
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R+ +R R++ +G W+P+RV TV + GQ GYH RTE+NK++ ++G + +
Sbjct: 230 RQGYR--RRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEPTVD----- 282
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
GGF YG V+ Y LIKG GP +R++ R ++ + S + ++++
Sbjct: 283 ----------GGFVGYGEVDGPYALIKGSLPGPDQRLLRFRTAV--RPSDQPRLDPEVRY 330
Query: 363 IDTSSKFG 370
+ T+S G
Sbjct: 331 VSTASNQG 338
>gi|374724264|gb|EHR76344.1| Ribosomal protein L3 [uncultured marine group II euryarchaeote]
Length = 336
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 185/367 (50%), Gaps = 35/367 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K HPR GS+ F PRKRA+R G VK++P D S+ R+ F G+KAGMTH++ P
Sbjct: 3 KKSHPRRGSMAFSPRKRANRPFGHVKSWPTTDASE-VRMQGFAGWKAGMTHVLSRDLNPR 61
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S +E VT++E P + ++GV GY TP G ++ WA
Sbjct: 62 SPSAGQEVRIPVTVVECPKMRILGVRGYAMTPYGKQAAGEAWAD--------------AA 107
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTV-IRVLAHTQIRKMKGLKQKKAHLME 183
+AF K+ + D + E + V +R++ TQ + G+ K +ME
Sbjct: 108 KIAEAFEDLFKRLPVRK-EHDAEKHFENLMNADLVEVRLICATQPHSVSGIPTKVPSVME 166
Query: 184 IQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR 243
+ ++GG++ ++++A EK + + DI+ +TKG G++GV+ R+G
Sbjct: 167 VGLDGGNIGDQLNYAK---EKLGEEYSXXXXXXLTDIVAITKGYGWQGVIKRFGGKLQSH 223
Query: 244 KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFD 303
K + R+ +GA+ V ++ + GQ GYH RTE NK+I ++ AS E HS
Sbjct: 224 KNSKKRRQHGNMGAFGDGYVRKSIRQGGQTGYHQRTEYNKRIMRI--ASTEDHS------ 275
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
ITP GGF HYG V DY+L+KG GP KR++ R + + S L ++ ++
Sbjct: 276 -----ITPAGGFLHYGEVKSDYILVKGSVPGPAKRLIRFRDAT--RGSDKTLHPFEITYV 328
Query: 364 DTSSKFG 370
T+SK G
Sbjct: 329 STASKQG 335
>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
Length = 319
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 182/352 (51%), Gaps = 42/352 (11%)
Query: 29 VKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVG 88
+K++P+ P L AFL YK GMTH+ ++PGS H +E VT++E PP+VV
Sbjct: 1 MKSWPEVQSENPLPL-AFLAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTA 59
Query: 89 VVGYVKTPR-GLRSLCTVWAQH--LNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKD 145
V Y P GL +L WAQ L E+ Y+ + + D K
Sbjct: 60 VRVYGYDPNIGLYTLSEAWAQPETLVEKYNLDIYR---------VVPRLRFPDPDKAVKK 110
Query: 146 IQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGS-VAQKVDFAYGFFEK 204
++ L+K+ +R++A TQ R + GL +KK L+EI++ GGS + + ++A
Sbjct: 111 LEGLLDKVYD----VRIIAATQPRLVGGLSKKKPDLLEIKIGGGSSIEDRFNYAVKLLGS 166
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPAR 262
++ + VF++ + +D+I VTKGKG++GV+ R+GV LPR K +G R + G PA
Sbjct: 167 ELKVSDVFREGQFVDVIAVTKGKGFQGVIKRFGVKELPRWHKHRKGSR--SGPGTRGPA- 223
Query: 263 VSFT---VARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYG 319
SF+ V + GQ G+H RTE NK+I K+G E ITP GGF HYG
Sbjct: 224 TSFSWSEVPQPGQMGFHRRTEYNKRILKIGDNGLE--------------ITPAGGFLHYG 269
Query: 320 VVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
+V Y+L+ G G KR + LR + + + K+ +I +SK G+
Sbjct: 270 IVRSTYILLAGSIPGTPKRPIVLRHPV--RPRWMPEAPPKITYISLASKQGN 319
>gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1]
gi|166233158|sp|A3CSZ7.1|RL3_METMJ RecName: Full=50S ribosomal protein L3P
gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1]
Length = 337
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 179/368 (48%), Gaps = 35/368 (9%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL + PRKRA + ++P+ P + F GYK GMTH++ +
Sbjct: 3 KINRPRRGSLAYSPRKRAKSPVPRYGSWPEYT-GAPA-VQGFAGYKVGMTHVIMVDDHKS 60
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S K+ VT++E PP+ V GV Y + G +L W L+EE+ RR N K
Sbjct: 61 SPTEGKDVMVPVTVVEVPPMRVAGVRAYGEDTYGKHALTEAWTTDLDEELSRRI--NVPK 118
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
+ A K +GK + + LA+T+ ++ G+ +K LME+
Sbjct: 119 NHDTAAALEAVKAAVGEGK-------------VSELYALAYTRPMELTGVPKKVPDLMEM 165
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
++ GGS+ ++ +A K+I I + E +D+ VT GKG EG V RWGV RK
Sbjct: 166 RIAGGSLEDQIAYAAEILGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRK 225
Query: 245 THRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
RG +K + +G WHP V + V + GQ GY RTE NK+I K+G E
Sbjct: 226 HSRGGKKRHIGNLGPWHPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDE-------- 277
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
ITP GGF HYG+V Y+LIKG GP KR+V +R ++ + + + F
Sbjct: 278 ------ITPAGGFLHYGLVRGPYVLIKGSVPGPNKRLVRIRSAI--RQGEHTVRTPAINF 329
Query: 363 IDTSSKFG 370
+ S+ G
Sbjct: 330 VSVQSQQG 337
>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3, partial [Candidatus
Caldiarchaeum subterraneum]
Length = 289
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 42/331 (12%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK+ PRHGSL +LPR RA+ +VK +P + + F+GYK GMT +
Sbjct: 1 MGRRKYSRPRHGSLAYLPRGRAASILPRVKHWPDGE-----GVLGFIGYKVGMTMVHYID 55
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
P S E +A T++ PPL V+G+ Y L ++ W++ + E+V+RR
Sbjct: 56 NTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGKYWSKEVPEDVKRR--- 112
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
F E + D+ +R++ TQ R + K +
Sbjct: 113 ------NPTFRPMPSAEEIGQLEDDVDE-----------VRIVVATQPRLVGAGKAPR-- 153
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ EI++ GG A+ ++ A K + + VF++ + +D+I VTKGKG++GVV R+GV+
Sbjct: 154 IAEIKI-GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSI 212
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
L RK+ + R VA IG W+P V +TV R+GQ GYH RTE NK+I ++G
Sbjct: 213 LQRKSRKTRRGVAAIGPWNPHYVMYTVPRSGQMGYHRRTEFNKRILRIGD---------- 262
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGC 331
I P G+ +G+V DYL+++G
Sbjct: 263 ----DPASINPKSGWHRFGLVKSDYLVLEGS 289
>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
Length = 358
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 197/383 (51%), Gaps = 37/383 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK E PR GS G PRKRA+ +V+++P D KP AFLGYK GMTH++
Sbjct: 1 MGARKKEAPRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMID 57
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTP-RGLRSLCTVW-------AQHLNE 112
++ +E VT+IETPP+VV+G Y P RG +L VW + L E
Sbjct: 58 DREHVDTAGQEIFVPVTVIETPPMVVLGARVYGYDPNRGRYALTEVWRNPSDTIKEKLGE 117
Query: 113 EVRRRFYKNWCKSKKKAFTKYT--KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRK 170
EV R++ K + K +E +K++ EK+ ++ +
Sbjct: 118 EVLRKYLLGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVVGVGLIMSSIPFLA--- 174
Query: 171 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 230
G+ +K ++E++V GGS + +++A G + + ++ V + + +D+IGVTKGKG++
Sbjct: 175 -GGVSKKAPDILEVKV-GGSPVEALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGKGFQ 232
Query: 231 GVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKL 288
GV+ R+GV LP+ K +G R+V +W S+ V + GQ GYH RT+ NK++
Sbjct: 233 GVIKRFGVKELPKWHKHRKGSRRVGA-RSWGKGTSSY-VPQPGQMGYHRRTDYNKRVL-- 288
Query: 289 GKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLK 348
M D ++ ++ GG+ HYG+V Y+++KG GP KR + +R ++
Sbjct: 289 ----------MISDDPSKINVE--GGWLHYGLVKSKYVVLKGSVFGPPKRPIIMRLP-VR 335
Query: 349 QTSRLALEEIKLKFIDTSSKFGH 371
+ + K+ +I SSK G+
Sbjct: 336 PPAWVPPGPPKITYISLSSKQGN 358
>gi|3914741|sp|Q29293.1|RL3_PIG RecName: Full=60S ribosomal protein L3
Length = 130
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 101/130 (77%), Gaps = 6/130 (4%)
Query: 205 QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVS 264
++P++ VF +DEMID+IGVTKGKGY+GV +RW +LPRKTHRGLRKVACIGAWHPAR +
Sbjct: 1 RVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARXA 60
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPMGGFPHY 318
F+VARAGQ GYHHRTE+NKKIYK+G+ ++ T++D ++K I P+G F HY
Sbjct: 61 FSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNXXTDYDLSDKSINPLGRFVHY 120
Query: 319 GVVNEDYLLI 328
G V D++++
Sbjct: 121 GEVTNDFVML 130
>gi|395644916|ref|ZP_10432776.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
gi|395441656|gb|EJG06413.1| ribosomal protein L3 [Methanofollis liminatans DSM 4140]
Length = 337
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 35/364 (9%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSL + PRKRA K +++P+ +P L GYK GMTH++ + S
Sbjct: 7 PRRGSLAYSPRKRAKSQVPKYQSWPEHK-GEPV-LQGIAGYKVGMTHVIMVDDHKSSPTE 64
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
+E VT++E P + V V YV G L VWA+ L+ + +R
Sbjct: 65 GREIMVPVTVVEVPKMRVAAVRAYVTDSYGRHPLTEVWAEELDPLLAKRV---------- 114
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
K+++ + +I+ +L + + I L +TQ G+ +K LME +++G
Sbjct: 115 ---TLPKEHDREAVLGEIRERLAAGQ--VSDIVALVYTQPAATTGVPKKVPELMETRIDG 169
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
S+ D A K+I ++ + + +D+ +TKGKG +G V RWG+ RK RG
Sbjct: 170 TSIEGCFDLATSLLGKEIDPLSLVSEGQYVDVTAITKGKGTQGAVKRWGIQVRKRKHSRG 229
Query: 249 LRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTE 306
+K + +G W+P V + V + GQ GY RTE NK+I K+G
Sbjct: 230 GKKRHIGNLGPWNPHHVRWQVPQMGQLGYQQRTEFNKRILKVGTDGPA------------ 277
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
I P GGF HYG+V Y++IKG GP KR++ +R ++ + A+ + ++
Sbjct: 278 --IVPEGGFLHYGIVRNSYIMIKGSIPGPAKRLIRIRPAI--RQGEHAIRAPAVNYVSLE 333
Query: 367 SKFG 370
SK G
Sbjct: 334 SKQG 337
>gi|218117235|emb|CAQ37747.1| 60S ribosomal protein L3 [Brachionus plicatilis]
Length = 130
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 98/121 (80%), Gaps = 1/121 (0%)
Query: 268 ARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLL 327
ARAGQ GYHHRTE+NKK+Y++G + +++ A TEFD EK ITPMGGFP YG+V +D+++
Sbjct: 1 ARAGQKGYHHRTEINKKVYRIGSGADKAN-AKTEFDPAEKSITPMGGFPQYGIVRQDFVM 59
Query: 328 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
+KGC VG KKR +TLR+SL+ QT R+A E+I LKFIDTSSKFGHGRFQT +EK + G +
Sbjct: 60 VKGCIVGTKKRPITLRKSLITQTKRVAFEKIALKFIDTSSKFGHGRFQTAEEKKSFMGPV 119
Query: 388 K 388
K
Sbjct: 120 K 120
>gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon]
Length = 315
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 162/344 (47%), Gaps = 55/344 (15%)
Query: 5 KFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPG 64
K PR GSL F PRKRA R ++ ++ + F GYKAGMTHI+
Sbjct: 3 KRHRPRRGSLAFTPRKRA---RSEICRIKRETIVDGGNIQGFAGYKAGMTHIILTDNVSH 59
Query: 65 SKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCK 124
S E VT+IETPP+ V G R YK+
Sbjct: 60 SMTKGMEIAIPVTVIETPPMRVEGF---------------------------RLYKSTHY 92
Query: 125 SKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEI 184
K+ Y + ++ K LE +R+++ T + + G+ +KK +ME
Sbjct: 93 GKQTVTEAYNDLSKIEELIKSNSTGLE--------LRMISSTLPKAVNGVPKKKQEVMET 144
Query: 185 QVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK 244
Q+ GG + + + +A K+I +F + + +D VTKGKG +G V RWG+T K
Sbjct: 145 QM-GGEIGKDLKYAKEMLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAK 203
Query: 245 THRGL--RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
R R V IG W P RV + V + GQ GY RTE NK+I K+G+ +E
Sbjct: 204 ARRSGKGRHVGAIGGWTPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEE-------- 255
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
ITP GGF +YG+V DY+L+KG GPKKR+V L +++
Sbjct: 256 ------ITPKGGFLNYGIVRNDYVLLKGSVPGPKKRLVRLSRAI 293
>gi|386876303|ref|ZP_10118425.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
BD31]
gi|386805879|gb|EIJ65376.1| ribosomal protein L3, partial [Candidatus Nitrosopumilus salaria
BD31]
Length = 296
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 171/330 (51%), Gaps = 35/330 (10%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK+ PR GSL + PR RA +++++PK + +P ++ A G+KAG +V
Sbjct: 1 MGARKYHQPRRGSLAYSPRIRAKSMEARIRSWPKLNSEEP-KILAHCGFKAGCVQLVTID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
++ K+ T++ TPP++++G+ GY K G + V+A+ + + + +
Sbjct: 60 DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHYGAHAEFDVYAEDIPKNIAKEITI 119
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
KN S + A + +L K+K+ ++ V + GL+QKK
Sbjct: 120 KNIEGSIENA-----------------EKRLGKIKEIFAIVAVSP-----RAAGLEQKKP 157
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++ E V+GG + ++ K+I ID +F+ +D+ +TKGKG++GV+ RWGV
Sbjct: 158 YIFEASVSGGDIQKQFTHVKELLGKEIKIDQIFETGATVDVAAITKGKGWQGVIQRWGVK 217
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ K+ + +R+V +G P V +TV RAGQ G+H RTE +K+I +G
Sbjct: 218 KKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQMGFHQRTEYDKRIMVMGNT-------- 269
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIK 329
D +E I P GG+ H+G+V D++++K
Sbjct: 270 ---DNSEMKINPDGGYKHFGLVKGDFIILK 296
>gi|407464763|ref|YP_006775645.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
gi|407047951|gb|AFS82703.1| 50S ribosomal protein L3P [Candidatus Nitrosopumilus sp. AR2]
Length = 331
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 180/359 (50%), Gaps = 34/359 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M RK PR GSL + PR RA +++A+P+ + ++ A G+KAG IV
Sbjct: 1 MGARKRHQPRRGSLAYSPRVRARSMEARIRAWPRLSATDEPKILAHCGFKAGCVQIVSID 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRF-Y 119
++ K+ T++ TPP++++G+ GY K G + V+A+ + + + +
Sbjct: 61 DRDKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGKHAEFDVYAEDIPKSIAKEITI 120
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
KN S + A +++L K+K+ ++ V + GL+ KK
Sbjct: 121 KNTAGSVENA-----------------ESRLRKIKEIYAIVAVSP-----RAAGLEMKKP 158
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
++ E V+GG + ++ K+I I+ +F+ +D+ +TKG G++GV+ RW V
Sbjct: 159 YIFEAMVSGGDIEKQFAHVKELLGKEIKIEQIFETGATVDVAAITKGHGWQGVMRRWNVK 218
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAM 299
+ K+ + +R+V +G P V +TV RAGQ G+H R E +K+I +G
Sbjct: 219 KKQHKSRKTVREVGSLGPISPQSVMYTVPRAGQTGFHQRVEYDKRIMIMGN--------- 269
Query: 300 TEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
TE D+ + I P GG+ H+G+V D++++KG G KR++ LR + ++A I
Sbjct: 270 TESDKIK--INPDGGYKHFGLVKGDFIILKGSVPGTYKRLIKLRTQIRNAPVKVAKPNI 326
>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
gi|42559678|sp|Q97BX7.1|RL3_THEVO RecName: Full=50S ribosomal protein L3P
gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
Length = 331
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 42/365 (11%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
H R GS+ + PR RA +++++P + S P ++ F G+K GMTH+ + S
Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
+ VT+IE PPL V+G+ Y + G + + W Q+L++E+
Sbjct: 64 AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVYEKWTQNLDKEL------------ 111
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
F K T E + + + + +R++ T+ + + G+ KK + E+++
Sbjct: 112 ---FKKITTFKEVKE---------KPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRI 159
Query: 187 NGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GG SV ++ ++A K I + + + +D++ VTKGKG+ G V R+GV LPRK
Sbjct: 160 GGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKN 219
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
+ R + +G WHP V TV +AGQ GY RT N ++ K K
Sbjct: 220 RKHRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKGEDAD---------- 269
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
I GGF HYG+V DY+L+ G GP KR++ +R ++ ++ +KL +I
Sbjct: 270 --TINVRGGFLHYGLVKNDYVLLFGSVPGPAKRLIKMRDPARQKVP--DIDNVKLDYISL 325
Query: 366 SSKFG 370
SK G
Sbjct: 326 ESKQG 330
>gi|147856396|emb|CAN82464.1| hypothetical protein VITISV_002661 [Vitis vinifera]
Length = 286
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/86 (89%), Positives = 82/86 (95%)
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
RTEKDITPMGGFPH GVV +DY+LIKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKLKFI
Sbjct: 201 RTEKDITPMGGFPHCGVVKDDYVLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFI 260
Query: 364 DTSSKFGHGRFQTTQEKAKYYGRLKA 389
DT+SKFGHGRF TTQEK K+YGRLKA
Sbjct: 261 DTASKFGHGRFPTTQEKQKFYGRLKA 286
>gi|119602067|gb|EAW81661.1| hCG22885, isoform CRA_b [Homo sapiens]
Length = 169
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 109/155 (70%), Gaps = 8/155 (5%)
Query: 241 LPRKTHRG-LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQ 293
LPR+ G + + H A + F+VARAGQ GYHHRTE+NKKIYK+G+
Sbjct: 6 LPRQEAEGPMSGSGELSVRHHA-IKFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKL 64
Query: 294 ESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRL 353
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R
Sbjct: 65 IKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRR 124
Query: 354 ALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 125 ALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPLK 159
>gi|118576052|ref|YP_875795.1| 50S ribosomal protein L3 [Cenarchaeum symbiosum A]
gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
Length = 328
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 170/358 (47%), Gaps = 35/358 (9%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRKF PR GSL + PR RA +++ +P+ +P RL A G+KAG IV
Sbjct: 1 MGHRKFSQPRRGSLAYSPRGRARSMEARIRGWPERQ-GEP-RLLAHAGFKAGCIQIVSID 58
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ + K+ T++ TPPL V+G+ GY K G V+A+ L EV
Sbjct: 59 DREHTPNAGKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPREV------ 112
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
K +G+ + + + + +L + + GL+QK+ +
Sbjct: 113 -------------AKYIVLRNGRLNAERAETMLGGTAEIYGILGVSP--RSAGLEQKRPY 157
Query: 181 LMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240
+ E V GGS+ ++ + K + V + +D+ +TKGKG++GV+ R G R
Sbjct: 158 IFEAPVRGGSMKERFAYLKDLLGKTVKASDVLEPGAGVDVAAITKGKGWQGVIQRMGAKR 217
Query: 241 LPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMT 300
K+ + +R++ +G P V +TV RAGQ G+H R E NK+I +G A ++
Sbjct: 218 KQHKSRKTVRELGSLGPISPQNVMYTVPRAGQMGFHQRIEYNKRIMAVGSAGEDD----- 272
Query: 301 EFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEI 358
I P GG+ H+G+V DY+++KG G +R+V LR + R + I
Sbjct: 273 -------AINPSGGYKHFGMVKGDYIVLKGSVPGTYRRLVKLRAQIRNAPKRTSKPNI 323
>gi|2982305|gb|AAC32138.1| 60S ribosomal protein L3 [Picea mariana]
Length = 86
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/86 (87%), Positives = 82/86 (95%)
Query: 304 RTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
RTEKDITPMGGFPHYGV+ +DY++I+GCCVG KKRVVTLRQSLLKQTSR ALEEIKLKFI
Sbjct: 1 RTEKDITPMGGFPHYGVLKDDYIMIRGCCVGTKKRVVTLRQSLLKQTSRTALEEIKLKFI 60
Query: 364 DTSSKFGHGRFQTTQEKAKYYGRLKA 389
DTSSKFGHGRFQTTQEKAK +G+LKA
Sbjct: 61 DTSSKFGHGRFQTTQEKAKIFGKLKA 86
>gi|215259693|gb|ACJ64338.1| 60S ribosomal protein L3 [Culex tarsalis]
Length = 143
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 92/121 (76%), Gaps = 6/121 (4%)
Query: 274 GYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLL 327
GYHHRTE+NKKIY++G +SA TE+D T+K ITPMGGFP YG +N+D+L+
Sbjct: 1 GYHHRTEINKKIYRIGAGIHTKDGKVVKNSAATEYDLTDKSITPMGGFPFYGEINQDFLM 60
Query: 328 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
IKGCC+G K+R++TLR+SLL T R +LE IKLKFIDTSSK GHGRFQT +K YYG L
Sbjct: 61 IKGCCIGAKRRIITLRKSLLTHTKRASLERIKLKFIDTSSKMGHGRFQTPADKKAYYGVL 120
Query: 388 K 388
K
Sbjct: 121 K 121
>gi|296082549|emb|CBI21554.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 81/85 (95%)
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
TEKDITPMGGFPH GVV +DY+LIKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKLKFID
Sbjct: 14 TEKDITPMGGFPHCGVVKDDYVLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFID 73
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLKA 389
T+SKFGHGRF TTQEK K+YGRLKA
Sbjct: 74 TASKFGHGRFPTTQEKQKFYGRLKA 98
>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
Length = 329
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 177/361 (49%), Gaps = 40/361 (11%)
Query: 17 LPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAV 76
+PRKR+S V ++P+ KP L F+GYKAGMTH + GS KE +
Sbjct: 1 MPRKRSSEFVPSVSSWPEVSAQKPT-LLGFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPI 59
Query: 77 TIIETPPLVVVGVVGY-VKTPRGLRSLCTVWAQH-LNEEVRRRFYKNWCKSKKKAFTKYT 134
T++E PP+ V+ V GY RGL ++ WA+ L+ E+ RR S AF
Sbjct: 60 TVLEAPPIFVLAVRGYGYDENRGLYTVGEAWARPPLDLELERRI------SAIGAF---- 109
Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN--GGSVA 192
+T K ++A L +K+ +RVL TQ + GL +K L+E++V G V
Sbjct: 110 ---DTQSMLKKLEASLSDIKE----VRVLVATQPKLTGGLSKKSPDLLEVKVASPGSDVK 162
Query: 193 QKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKV 252
D+A K + + VFQ M+D+I VTKGKG++G V R+GV LPR H+ +K
Sbjct: 163 AAFDYATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDVKRFGVKVLPR-WHKHRKKA 221
Query: 253 ACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITP 311
IGA H + + GQ G+H RTE NK+I + + +A TP
Sbjct: 222 RGIGARSHGKGTWWEIPNPGQLGFHRRTEYNKRILDI----TDDWAAY----------TP 267
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIK--LKFIDTSSKF 369
GGF HYG+ ++++G G KR + +R + L L +K + F+ SK
Sbjct: 268 AGGFLHYGIPRSTLVVLEGTIPGAVKRPIVMRYPVRPPRWYLKLGVVKPTITFVSLQSKQ 327
Query: 370 G 370
G
Sbjct: 328 G 328
>gi|225438469|ref|XP_002275287.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
Length = 110
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 81/85 (95%)
Query: 305 TEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFID 364
TEKDITPMGGFPH GVV +DY+LIKGCCVGPKKRVVTLRQSLLKQTSR+ALEEIKLKFID
Sbjct: 26 TEKDITPMGGFPHCGVVKDDYVLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFID 85
Query: 365 TSSKFGHGRFQTTQEKAKYYGRLKA 389
T+SKFGHGRF TTQEK K+YGRLKA
Sbjct: 86 TASKFGHGRFPTTQEKQKFYGRLKA 110
>gi|424812829|ref|ZP_18238069.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
gi|339757051|gb|EGQ40634.1| ribosomal protein L3 [Candidatus Nanosalinarum sp. J07AB56]
Length = 323
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 166/363 (45%), Gaps = 52/363 (14%)
Query: 9 PRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLH 68
PR GSLG+ P+ RA R + +P+ P F YKAGMT ++ V+
Sbjct: 7 PRSGSLGYKPKVRADRVYPDIDNWPEAGEPTPLD---FPAYKAGMTRVLH-VDDTEGATQ 62
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPR-GLRSLCTVWAQHLNEEVRRRFYKNWCKSKK 127
+E VT++E PP V G Y P G + + W + + E++R
Sbjct: 63 GQEVATPVTVLEAPPARVYGARFYTYDPNHGKQVMTEAWTESPSPELQR----------- 111
Query: 128 KAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVN 187
T K +G D + ++ +R+L HTQ Q H + N
Sbjct: 112 --ATDIPK-----NGNLDNIEEAKEETGEIDEVRLLVHTQ-------PQMTGHGHPVPAN 157
Query: 188 -----GGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
GG Q+++ A QI V + + D + VTKGKG EG V R GVT+L
Sbjct: 158 FETGLGGDTEQQLEAAENLIGTQISPQDVLDEGQYTDAVAVTKGKGMEGPVKRHGVTKLG 217
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
KT + RK +G WHP +S+ + GQ G+H+RTE+NK+I+ +G +
Sbjct: 218 HKTQKKRRKAGNVGPWHPDTLSWKIPLPGQEGFHNRTEINKRIFDIGDNPE--------- 268
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
R ++D GG+ HYG + Y+L+KG G KR+V LRQ + K + E+++
Sbjct: 269 -RAQRD----GGYKHYGELESGYILVKGSVPGTTKRLVRLRQPIRKDENP---GEVEVTH 320
Query: 363 IDT 365
IDT
Sbjct: 321 IDT 323
>gi|255710123|gb|ACU30881.1| 60S ribosomal protein L3 [Ochlerotatus triseriatus]
Length = 144
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 6/121 (4%)
Query: 274 GYHHRTEMNKKIYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLL 327
GYHHRTE+NKKIY++G +SA TE+D T+K ITPMGGFP YG +N D+L+
Sbjct: 2 GYHHRTEINKKIYRIGAGIHTKDGKVVKNSAATEYDLTDKTITPMGGFPLYGEINNDFLM 61
Query: 328 IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRL 387
+KGCC+G K+R++TLR+SLL T R +LE+I LKFIDTSSK GHGRFQT +K YYG L
Sbjct: 62 VKGCCIGAKRRIITLRKSLLVHTKRASLEQINLKFIDTSSKMGHGRFQTPADKRAYYGVL 121
Query: 388 K 388
K
Sbjct: 122 K 122
>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 350
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 30/368 (8%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+G+ PRKRA R ++ ++P+ D S+ R+ F G+KAGMTHI+ P L + +
Sbjct: 1 MGYSPRKRAVRQFPRISSWPESDASE-VRVQGFAGWKAGMTHILLRDTNPPLYLSQAGSQ 59
Query: 74 EAV-TIIETPPLVVVGVVGYVKTPR-GLRSLCTVW---AQHLNEEVRRRFYKNW-----C 123
E + E + V G + R GL++ VW +Q E + RF
Sbjct: 60 EGGHSRFEASRMSVRLGSGSSRLARYGLQTAGEVWTDISQGGPENLVPRFANQTRGERDI 119
Query: 124 KSKKKAFTKYTKKYETDDGKKDIQAQLEKMK-KYCTVIRVLAHTQIRKMKGLKQKKAHLM 182
+ +K + + +G + +A +E ++ + + +R++ TQ + + K +M
Sbjct: 120 EEGRKPAKRGGRIPSRSNGSQ--EASIESLRGQDLSEVRLIVSTQPNMVGSIPSKTPEIM 177
Query: 183 EIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP 242
E+ + GG K+D+A QI +D V+Q + +D++GVTKGKG++G + R+G+ L
Sbjct: 178 EVDLVGGDTEAKLDWAMERLGGQIGLDDVYQAGQEVDVVGVTKGKGWQGSIKRFGLKLLT 237
Query: 243 RKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEF 302
K + R+ +G + V T+ +AGQ GYH RTE+NK+I ++
Sbjct: 238 HKNSKRRRQGGNMGDFGTGYVRKTIRQAGQVGYHKRTELNKRILRISNPD---------- 287
Query: 303 DRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF 362
E +ITP GGF +YG V Y++++G GP KR++ R + R E+++ +
Sbjct: 288 ---ESEITPAGGFLNYGEVRNPYMIVQGSLPGPAKRLLRFRDPI---RPRKKDGEVEVTY 341
Query: 363 IDTSSKFG 370
+ TSSK G
Sbjct: 342 VSTSSKQG 349
>gi|149390973|gb|ABR25504.1| 60S ribosomal protein l3 [Oryza sativa Indica Group]
Length = 82
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/82 (89%), Positives = 78/82 (95%)
Query: 308 DITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 367
DITPMGGFPHYGVV DYL+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS
Sbjct: 1 DITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSS 60
Query: 368 KFGHGRFQTTQEKAKYYGRLKA 389
KFGHGRFQTT EK +++G+LKA
Sbjct: 61 KFGHGRFQTTDEKQRFFGKLKA 82
>gi|374633068|ref|ZP_09705435.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
gi|373524552|gb|EHP69429.1| archaeal ribosomal protein L3 [Metallosphaera yellowstonensis MK1]
Length = 299
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 171/332 (51%), Gaps = 40/332 (12%)
Query: 45 AFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCT 104
F+GYK GMTH+ E S + KE VT++ETPPL V+ + Y +G S+
Sbjct: 2 GFVGYKVGMTHVFMVDENKSSSTYGKEIYVPVTVLETPPLNVLAIRAYGLDSKGEHSVIA 61
Query: 105 VWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMK---KYCTVIR 161
L ++ N+ + + K +K + LEK+K + + +R
Sbjct: 62 EAWGDLGSQL------NYIQRRIKTLKLSNEK---------LAPALEKIKSSIESVSFLR 106
Query: 162 VLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDII 221
+L TQ + L +K ++E+Q+ GG + ++ +A K + + VF++ +++DII
Sbjct: 107 LLISTQPYLIPSLGKKTPDIVEVQIGGGDLKSQLQYAEKILGKTLSVTDVFKEGQLVDII 166
Query: 222 GVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFT-VARAGQNGYHHR 278
GVTKG G++GV+ R+GV LPR K +G RKV G P+ + + V + GQ GYH R
Sbjct: 167 GVTKGHGFQGVIKRYGVQELPRWHKHRKGSRKVGTKG---PSLGTPSYVPQPGQTGYHRR 223
Query: 279 TEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
TE NK+I+K+ S + +S I P GGF YG+V Y++I+G +G KR
Sbjct: 224 TEYNKRIFKI---SNDVNS-----------INPKGGFVRYGLVRNSYMIIEGSTIGAIKR 269
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
+ LR + ++L ++ ++D +SK G
Sbjct: 270 PLYLRYPIRPYAAQLP--SPRITYVDLNSKQG 299
>gi|154343495|ref|XP_001567693.1| putative ribosomal protein L3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065025|emb|CAM43137.1| putative ribosomal protein L3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 154
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKA-SQESHSAMTEFDRTEKDITPMGGFPHYGVVNE 323
+TVARAGQ+GYHHRT++NKKIY++G+ + E + A T +D T K ITPMGGF YG V
Sbjct: 2 YTVARAGQHGYHHRTQLNKKIYQIGRTVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRN 61
Query: 324 DYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKY 383
DY+++KG GP++RV+TLR+ + QTSR E+I LKFIDTSSK GHGRFQT +EK ++
Sbjct: 62 DYVMLKGSVSGPRRRVMTLRRPMAPQTSRQLKEKIVLKFIDTSSKIGHGRFQTKKEKNQW 121
Query: 384 YGRLK 388
+G LK
Sbjct: 122 FGPLK 126
>gi|385805567|ref|YP_005841965.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
gi|383795430|gb|AFH42513.1| 50S ribosomal protein L3P [Fervidicoccus fontis Kam940]
Length = 347
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 168/348 (48%), Gaps = 25/348 (7%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HRK PR G+LG PR+R +V+ +P + K L F+GYK GMTH +
Sbjct: 1 MGHRKKSAPRRGTLGVRPRQRFEGIVPRVRTWPVLEEKKIFPL-GFIGYKVGMTHALVVD 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGY-VKTPRGLRSLCTVWAQHLNEEVRRRFY 119
++ S K+ VT++ETPP+++ G+ GY G + L WA
Sbjct: 60 DRKTSITFGKQIFTPVTLLETPPMILAGIRGYSFDINEGKQPLTEAWATG---------- 109
Query: 120 KNWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKA 179
K + K + + ++ ++ +LEK +R L +Q G+ +KK
Sbjct: 110 ---DTLKNTNIERLIKSFSPNSTQQKLE-ELEKSLSEMAELRALLLSQPTLAGGISKKKP 165
Query: 180 HLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVT 239
L+E+ ++G + + +A K I I +F + +DII VTKGKG++G V R+G+
Sbjct: 166 ELIEVGLSGKDLKAQFSYAVEKLGKTIKISEIFNPGKFVDIIAVTKGKGFQGPVKRFGIK 225
Query: 240 RLPRKTHRGLRKVACIGAWHPARVSFTVA-RAGQNGYHHRTEMNKKIYKLGKASQESHSA 298
LPR H+ + IGA P + + A +AGQ G+H R + NK+I + +
Sbjct: 226 VLPR-WHKHRKAARKIGARGPGMGALSTAPQAGQMGFHQRVDYNKRILYIADTEGKDKEL 284
Query: 299 MTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
+ + I P G+ YG++ D++++ G G +KR V LRQ +
Sbjct: 285 LAK-------INPSSGWHKYGLIRTDFVILAGSIPGSRKRPVILRQPV 325
>gi|398021160|ref|XP_003863743.1| ribosomal protein L3, putative, partial [Leishmania donovani]
gi|322501976|emb|CBZ37060.1| ribosomal protein L3, putative, partial [Leishmania donovani]
Length = 106
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 89/106 (83%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVW 106
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP GL+++ TVW
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTVW 106
>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
gi|42559694|sp|Q9HIQ9.1|RL3_THEAC RecName: Full=50S ribosomal protein L3P
gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
Length = 331
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 178/365 (48%), Gaps = 42/365 (11%)
Query: 8 HPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKL 67
H R GS+ + PR RA K++++P + ++ F G+K GMTH+ + S
Sbjct: 6 HSRRGSMAYYPRVRAKSVDPKIRSWP--EIKGEVKVQGFAGFKVGMTHVEMIDYRKKSVT 63
Query: 68 HKKETCEAVTIIETPPLVVVGVVGYVKTPRG-LRSLCTVWAQHLNEEVRRRFYKNWCKSK 126
+ VT++E PPL VVG Y + G L + WA+ L++E+ R+ + K
Sbjct: 64 AGQPILVPVTVVEVPPLDVVGYRLYDEDAEGNLVVVFEAWAKDLDKEIFRKI----PEIK 119
Query: 127 KKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQV 186
K A + YE +R++ T+ + + G+ KK + E+++
Sbjct: 120 KVAERDPPESYED--------------------VRIIVATRNKDVPGIPSKKPEIFELRI 159
Query: 187 NGG-SVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT 245
GG SV +++++A KQI + + +D++ +TKGKG+ G V R+GV LPRK
Sbjct: 160 GGGNSVKERLEYAKNHLGKQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKN 219
Query: 246 HRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRT 305
+ R + +G WHP V TV +AGQ G+ RT N ++ K G E D
Sbjct: 220 RKHRRMIGTLGPWHPDWVRNTVPQAGQMGFQQRTISNVRVIKYGNKE--------EVD-- 269
Query: 306 EKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDT 365
I GGF HYG V DY+L+ G G KR++ +R ++ +EE+KL++I
Sbjct: 270 --SINVRGGFLHYGFVKNDYVLLFGSIPGASKRLIKMRDPARQKVP--DIEEVKLEYISL 325
Query: 366 SSKFG 370
SK G
Sbjct: 326 ESKQG 330
>gi|452210662|ref|YP_007490776.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
gi|452100564|gb|AGF97504.1| LSU ribosomal protein L3e (L3p) [Methanosarcina mazei Tuc01]
Length = 283
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 145/294 (49%), Gaps = 33/294 (11%)
Query: 79 IETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
IETP + V V Y + G +++ WA L+ E++RR ++ + K E
Sbjct: 21 IETPAIRVAAVRAYTEDSTGEKAIAEAWAADLDSELKRRIPIPAAGNQAEGLENIGKLIE 80
Query: 139 TDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFA 198
+G+ + IR + +T + + G+ +K +ME ++ + K ++A
Sbjct: 81 --EGR-------------VSDIRAVTYTLPKSLTGVPKKVPDIMESGISAKDLGAKFEYA 125
Query: 199 YGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHR--GLRKVACIG 256
+ + VF+ ++D +T GKG +G V RWG+ K R LR++ +G
Sbjct: 126 KSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQLQKGKHSRQGSLRQIGTLG 185
Query: 257 AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFP 316
+++P+RVS+ V + GQ GYH RTE NK+I K+G +E +TP GGF
Sbjct: 186 SFNPSRVSWRVPQMGQTGYHQRTEFNKRILKIGSDGEE--------------VTPEGGFI 231
Query: 317 HYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
+YG+V DY+LIKG GP KR++ LR + + + L E + +I SK G
Sbjct: 232 NYGLVRGDYVLIKGSVPGPSKRLIRLRDPI--RAKKADLGEPNILYISRESKQG 283
>gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis]
gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis]
Length = 94
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 207 PIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFT 266
P+ VF DEMID+IGVTKG G++GV RWG +LPRKTH+GLRKVACIGAWHPARVSF+
Sbjct: 1 PVRKVFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLPRKTHKGLRKVACIGAWHPARVSFS 60
Query: 267 VARAGQNGYHHRTEMNKKIYKLGKA 291
VARAGQ GYHHRTE+NKKIY++G+
Sbjct: 61 VARAGQAGYHHRTELNKKIYRIGQG 85
>gi|395756298|ref|XP_002834016.2| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
Length = 164
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 170 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
K+ +QKKAH E+ + ++ +A G EKQ + + E+ID+I VTKG+G
Sbjct: 2 KLLPFRQKKAHTSEVHKSETPSQKENAWAQGRLEKQGTGHSEDSQSEVIDVIAVTKGRGV 61
Query: 230 EGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 289
+GV +RW +LPRKTH+GLRKVACIGAWHPARV ++ARAGQ GYHHRTE+NKKIY++G
Sbjct: 62 KGVTSRWHTKKLPRKTHKGLRKVACIGAWHPARVGCSIARAGQKGYHHRTELNKKIYRIG 121
Query: 290 KASQES------HSAMTEFDRTEKDITPM 312
+ ++A T +D T K IT +
Sbjct: 122 RGPHMEDGKLVKNNASTSYDVTAKAITLL 150
>gi|431890863|gb|ELK01742.1| 60S ribosomal protein L3 [Pteropus alecto]
Length = 303
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 107/181 (59%), Gaps = 35/181 (19%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KF PR S L R A+R+ GKVK+FPKDD SK LTA LGYKAG+T+IV++V
Sbjct: 1 MSHSKFSTPRKFSASHL-RNAAARNHGKVKSFPKDDLSKTVHLTALLGYKAGVTYIVQEV 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
PGSK ++KE E VTI+ETP +V+VG+
Sbjct: 60 NSPGSKENEKEVVETVTIVETPSMVIVGI------------------------------- 88
Query: 121 NWCKSKKKAFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAH 180
+SKKKA T+Y KK++ +DGK+ ++ MKKYC VIR++ HTQ+ + L Q+KAH
Sbjct: 89 --HRSKKKALTQYCKKWQDNDGKRQLEKGFNSMKKYCQVIRIIIHTQMHLLP-LHQEKAH 145
Query: 181 L 181
L
Sbjct: 146 L 146
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 98/142 (69%), Gaps = 7/142 (4%)
Query: 253 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKA------SQESHSAMTEFDRTE 306
A + AWHPA+V+F+VA AG GY RTE+NK I K+G+ ++A ++D ++
Sbjct: 144 AHLRAWHPAQVAFSVAWAGWKGYRRRTEINK-ICKIGQGYLIKDGKLIENNASADYDLSD 202
Query: 307 KDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTS 366
K I P+GGF HYG V D++++KGC +G KKRV+TL + LL QT + AL++I KFIDT+
Sbjct: 203 KSINPLGGFVHYGEVTNDFIILKGCVMGTKKRVLTLSKFLLVQTKQQALKKIGFKFIDTT 262
Query: 367 SKFGHGRFQTTQEKAKYYGRLK 388
SKFGHG FQT +EK + G L+
Sbjct: 263 SKFGHGCFQTVEEKKAFMGPLR 284
>gi|449708742|gb|EMD48143.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 121
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 87/120 (72%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL F PRKR + R V AFPKD+ ++ LT FLG+KAGMTH++R+V
Sbjct: 1 MSHRKFEAPRHGSLAFHPRKRVHKVRATVSAFPKDNAAEKPHLTGFLGFKAGMTHVIREV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYK 120
++ +KL K E VTIIETPP+VV G VGY KT GL+ + V+A+H+ +E +RR+ K
Sbjct: 61 KRTNTKLPKDGVLEPVTIIETPPMVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTK 120
>gi|169626513|ref|XP_001806656.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
gi|111054968|gb|EAT76088.1| hypothetical protein SNOG_16548 [Phaeosphaeria nodorum SN15]
Length = 91
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 74/84 (88%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PRHGSL FLPRKRA+RHRGKVK+FPKDDP KP LTA +GYKAGMT IVRD+
Sbjct: 1 MSHRKFEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPL 84
++PG+KLHKKE EA T+IETPP+
Sbjct: 61 DRPGAKLHKKEIVEACTVIETPPV 84
>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 322
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 173/355 (48%), Gaps = 41/355 (11%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSK-PCRLTAFLGYKAGMTHI--VRDVEKPGSKLH 68
GSL + R+RA R +V+ P +P K P L+ + +KAGMT + + D E P +
Sbjct: 3 GSLQYWHRRRAQRRLPRVRNVP--NPEKDPVSLSNIVAFKAGMTSLSYIDDSESPSKGM- 59
Query: 69 KKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKK 128
E TI+E P G+ Y P CT A+ N+ + + K+ +
Sbjct: 60 --EVLRGCTILEVPKTEAYGIRLYSVDPTTKYLKCT--AEIYNKAIANKIGIKEIKTDES 115
Query: 129 AFTKYTKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNG 188
+K+ + +L K+ ++ A T +Q E V G
Sbjct: 116 KISKF-------------KERLSDFKRIGVLLVAHADTI-----SAEQNHPTKYESTVTG 157
Query: 189 GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG 248
G+ Q+ DFA K++ VF+ E ID++ VTKGKG+ GV+ R GV RL K +
Sbjct: 158 GNAEQRFDFAAQLVGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLDHKATQK 217
Query: 249 LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
+R + +GA+ P ++ +TV R GQ G+++RTE NK+I LG AS TEK
Sbjct: 218 IRHIGALGAFTPGKIMYTVPRPGQLGFNYRTEHNKRILVLGAASD-----------TEK- 265
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFI 363
+ G +YG+V DY+LI+G GP KR+V L++S+ + + ++E K+ +I
Sbjct: 266 VNIKSGIKNYGLVKSDYILIEGSVPGPAKRIVRLKKSVNNRNA-AGIKEPKVNYI 319
>gi|398022540|ref|XP_003864432.1| ribosomal protein L3, putative, partial [Leishmania donovani]
gi|322502667|emb|CBZ37750.1| ribosomal protein L3, putative, partial [Leishmania donovani]
Length = 98
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 82/98 (83%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSH KFEHPRHG LGFLPRKR+ + RG+ +AFPKDD ++ LT+F+ +KAGMTHIVRDV
Sbjct: 1 MSHCKFEHPRHGHLGFLPRKRSRQIRGRARAFPKDDATQKPHLTSFMVFKAGMTHIVRDV 60
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG 98
++PGSK++KKE E VTI+E PP+V+VG+VGY +TP G
Sbjct: 61 DRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVG 98
>gi|443691463|gb|ELT93305.1| hypothetical protein CAPTEDRAFT_218970 [Capitella teleta]
Length = 118
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 77/93 (82%)
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++ TE+D TEK ITPMGGFPHYG VN+D++++ GCC+GPKKRV+TLR+SLL T R AL
Sbjct: 15 NNGSTEYDVTEKTITPMGGFPHYGEVNQDFIMLGGCCMGPKKRVITLRKSLLTHTKRKAL 74
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E++ LKFIDTSSKFGHGRFQT QEK + G LK
Sbjct: 75 EKMNLKFIDTSSKFGHGRFQTHQEKRNFMGPLK 107
>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
Length = 319
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 168/357 (47%), Gaps = 39/357 (10%)
Query: 14 LGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETC 73
+ + PR RA + +++++P+ + ++ AF GYK GMTHI + S K
Sbjct: 1 MAYYPRVRAKKIGAEIRSWPEIEGK--SKIQAFAGYKVGMTHIQVTDYRKTSVTAGKTIM 58
Query: 74 EAVTIIETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKY 133
VT++E PP+ V+ + Y GL+ V+A+ E++ + +K + K K
Sbjct: 59 VPVTVVEVPPINVIAIRYYEDGDNGLQ----VFAEKRAEQIEKEVFKRIPEIKNKE---- 110
Query: 134 TKKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQ 193
K E D +R+L +T + + G+ K + E++++G ++A
Sbjct: 111 PKNIEIKD---------------VADVRLLVNTNPQLVTGIPTKTPEIFEVRISGSTIAD 155
Query: 194 KVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVA 253
++ A K++ D +D+I VTKGKG++GVV R+GV LPR + R +
Sbjct: 156 RIKLAEEKLGKELHFDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRKHRRMIG 215
Query: 254 CIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMG 313
+G WHP V TV +AGQ G H RT N +I K Q +I G
Sbjct: 216 TLGPWHPDWVRNTVPQAGQVGLHQRTIHNIRIMKTATKEQVD------------EINVKG 263
Query: 314 GFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFG 370
GF YG+V DY+L+ G GP KR++ +R + +++ + +I SK G
Sbjct: 264 GFLKYGLVRNDYILLYGSISGPSKRLIKMRDPARQAVPN--TDKVDITYISRESKQG 318
>gi|449703558|gb|EMD43989.1| 60S ribosomal protein L3 [Entamoeba histolytica KU27]
Length = 131
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
Query: 274 GYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCV 333
G+ RTE+NKKIY+LG + +A TEFD TEK ITPMGGFPHYGVV D+L+IKG
Sbjct: 2 GFFKRTEVNKKIYRLG--CGDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMIKGTVA 59
Query: 334 GPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
G ++RV++LR++ T+R A E+I LKFIDTSSK+GH RFQTT EK G +K
Sbjct: 60 GIRRRVISLRKACFPSTTRTAQEQIVLKFIDTSSKYGHSRFQTTTEKKARMGPMK 114
>gi|414587229|tpg|DAA37800.1| TPA: hypothetical protein ZEAMMB73_342493 [Zea mays]
Length = 78
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/67 (88%), Positives = 64/67 (95%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFEHPRHGSLGFLPRKR+SRHRGKVK+FP+DDP KPC LTAFLGYKAGMTHIVR+V
Sbjct: 1 MSHRKFEHPRHGSLGFLPRKRSSRHRGKVKSFPRDDPKKPCHLTAFLGYKAGMTHIVREV 60
Query: 61 EKPGSKL 67
EKPGS +
Sbjct: 61 EKPGSSM 67
>gi|269864203|ref|XP_002651490.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
gi|220064427|gb|EED42567.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 125
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 85/125 (68%), Gaps = 7/125 (5%)
Query: 265 FTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNED 324
++VARAGQ G+H RT+ N +Y +G Q T+FD T K I PMGGFPHYG V D
Sbjct: 2 YSVARAGQVGFHRRTQQNLLVYDIGNGKQ---PIQTDFDLTVKTINPMGGFPHYGQVTND 58
Query: 325 YLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYY 384
Y+++KGC GP KRVVTLR+ + ++ A + + +KF+DTSSK G GRFQT++EK ++
Sbjct: 59 YIMLKGCVTGPCKRVVTLRKPVHER----ACKNVSIKFVDTSSKIGKGRFQTSEEKRAFF 114
Query: 385 GRLKA 389
G KA
Sbjct: 115 GISKA 119
>gi|335310307|ref|XP_003361971.1| PREDICTED: 60S ribosomal protein L3-like, partial [Sus scrofa]
Length = 109
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 6/102 (5%)
Query: 285 IYKLGKASQES------HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKR 338
IY++G+ S ++A T +D T+K ITP+GGFP YG VN D++++KGC G KKR
Sbjct: 1 IYRIGRGLHMSDGKMVKNNASTSYDMTDKSITPLGGFPRYGEVNNDFVMLKGCIAGTKKR 60
Query: 339 VVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEK 380
V+TLR+SLL SR ALE ++LKFIDT+SKFGHGRFQT QEK
Sbjct: 61 VITLRKSLLVHHSRRALENVELKFIDTTSKFGHGRFQTAQEK 102
>gi|28189887|dbj|BAC56558.1| similar to ribosomal protein L3 [Bos taurus]
Length = 104
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 74/93 (79%)
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 2 NNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 61
Query: 356 EEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
E+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 62 EKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 94
>gi|118481249|gb|ABK92574.1| unknown [Populus trichocarpa]
Length = 63
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/63 (93%), Positives = 62/63 (98%)
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
+IKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKF+DTSSKFGHGRFQTTQEK K+YGR
Sbjct: 1 MIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTQEKQKFYGR 60
Query: 387 LKA 389
LKA
Sbjct: 61 LKA 63
>gi|342906226|gb|AEL79396.1| ribosomal protein L3e [Rhodnius prolixus]
Length = 87
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 65/76 (85%)
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHG 372
GGFPHYG VN D+++IKGCCVGPKKRV+TLR+SLL T R+ALE+I LKFIDTSSKFGHG
Sbjct: 1 GGFPHYGEVNNDFIMIKGCCVGPKKRVITLRKSLLVHTKRVALEKINLKFIDTSSKFGHG 60
Query: 373 RFQTTQEKAKYYGRLK 388
RFQT +K+ + G LK
Sbjct: 61 RFQTPADKSAFMGPLK 76
>gi|8572163|gb|AAF77033.1|AF247852_1 ribosomal protein L3 [Caenorhabditis remanei]
Length = 91
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 73/91 (80%)
Query: 87 VGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDI 146
GV GY+ TP+G R+L T+WA+HL+EE RRRFY NW KSKKKAFTKY KK++ +DGKK I
Sbjct: 1 AGVTGYIDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLI 60
Query: 147 QAQLEKMKKYCTVIRVLAHTQIRKMKGLKQK 177
+A K+KKYC+ IRV+AHTQ++ ++ ++K
Sbjct: 61 EADFAKLKKYCSSIRVIAHTQMKILRRRQKK 91
>gi|297832722|ref|XP_002884243.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330083|gb|EFH60502.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 78
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 66/76 (86%), Gaps = 3/76 (3%)
Query: 46 FLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRGLRSLCTV 105
FLGYKAGMTHIVR+V KPGS+ HK+ETCEAVT+IETPP+V VVGYVK P GL + TV
Sbjct: 6 FLGYKAGMTHIVREVVKPGSQHHKEETCEAVTMIETPPMV---VVGYVKIPDGLSTRSTV 62
Query: 106 WAQHLNEEVRRRFYKN 121
WAQHL+EEVRRRFYKN
Sbjct: 63 WAQHLSEEVRRRFYKN 78
>gi|449707094|gb|EMD46813.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 119
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 285 IYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQ 344
IY+LG + +A TEFD TEK ITPMGGFPHYGVV D+L+IKG G ++RV++LR+
Sbjct: 1 IYRLG--CGDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMIKGTVAGIRRRVISLRK 58
Query: 345 SLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+ T+R A E+I LKFIDTSSK+GH RFQTT EK G +K
Sbjct: 59 ACFPSTTRTAQEQIVLKFIDTSSKYGHSRFQTTTEKKARMGPMK 102
>gi|359417496|ref|ZP_09209636.1| 50S ribosomal protein L3P, partial [Candidatus Haloredivivus sp.
G17]
gi|358032145|gb|EHK00909.1| 50S ribosomal protein L3P [Candidatus Haloredivivus sp. G17]
Length = 328
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 14/145 (9%)
Query: 204 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARV 263
K+I VF+ E D++ VTKGKG EG V R+G+ +L KT + RK +G WHP ++
Sbjct: 97 KEIEFSDVFEVGEYSDVVAVTKGKGVEGPVQRYGIKKLSHKTQKKRRKAGNVGPWHPDQL 156
Query: 264 SFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNE 323
S+ + GQ G+++RTE+NK+I G+ +E + GGF +YG VN
Sbjct: 157 SWRIPLPGQQGFNNRTEINKRILDFGEDPEE--------------VQKEGGFKNYGEVNS 202
Query: 324 DYLLIKGCCVGPKKRVVTLRQSLLK 348
+Y+LIKG GP +R+V LR +L K
Sbjct: 203 NYILIKGSVPGPSERLVRLRTALRK 227
>gi|405962067|gb|EKC27775.1| 60S ribosomal protein L3 [Crassostrea gigas]
Length = 85
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 64/77 (83%)
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGFPHYG VN+D+++IKGCC+G KKRV+TLR+SLL + A+E+I LKFIDTSSK+GH
Sbjct: 1 MGGFPHYGEVNQDFVMIKGCCMGSKKRVITLRKSLLATFRKKAMEKISLKFIDTSSKYGH 60
Query: 372 GRFQTTQEKAKYYGRLK 388
GRFQT +EK + G LK
Sbjct: 61 GRFQTFEEKKNFLGPLK 77
>gi|67594773|ref|XP_665876.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656732|gb|EAL35645.1| hypothetical protein Chro.50226 [Cryptosporidium hominis]
Length = 74
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/65 (83%), Positives = 58/65 (89%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
MSHRKFE PR GSLGFLPRKR SR RGKVKAFPKDD ++P LTAF+GYKAGMTHIVRDV
Sbjct: 1 MSHRKFERPRSGSLGFLPRKRCSRSRGKVKAFPKDDSNQPPHLTAFMGYKAGMTHIVRDV 60
Query: 61 EKPGS 65
+KPGS
Sbjct: 61 DKPGS 65
>gi|380481419|emb|CCF41852.1| 60S ribosomal protein L3, partial [Colletotrichum higginsianum]
Length = 83
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 62/72 (86%)
Query: 12 GSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKE 71
GSL +LPRKRA+RHRGKVK+FPKDD KP LTA +GYKAGMT IVRD+++PG+K +KKE
Sbjct: 12 GSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKANKKE 71
Query: 72 TCEAVTIIETPP 83
EAV+II+TPP
Sbjct: 72 VVEAVSIIDTPP 83
>gi|390370692|ref|XP_003731872.1| PREDICTED: 60S ribosomal protein L3-like, partial
[Strongylocentrotus purpuratus]
Length = 64
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 56/64 (87%)
Query: 2 SHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVE 61
SHRKF PRHGSLGFLPRKR+ RHRGK KAFPKDD SKP LT FLGYKAGMTHIVRDV+
Sbjct: 1 SHRKFSAPRHGSLGFLPRKRSRRHRGKAKAFPKDDKSKPVHLTCFLGYKAGMTHIVRDVD 60
Query: 62 KPGS 65
+PGS
Sbjct: 61 RPGS 64
>gi|219842416|gb|ACL37999.1| ribosomal protein L3 [Ochlerotatus taeniorhynchus]
Length = 99
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 60/77 (77%)
Query: 312 MGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGH 371
MGGFP YG +N D+L+IKGCC+G K+R++TLR+SLL R +LE+I LKFID SSK GH
Sbjct: 1 MGGFPFYGEINNDFLMIKGCCIGAKRRIITLRKSLLVHPKRASLEQINLKFIDPSSKMGH 60
Query: 372 GRFQTTQEKAKYYGRLK 388
GRFQT +K YYG LK
Sbjct: 61 GRFQTPADKRAYYGVLK 77
>gi|119580716|gb|EAW60312.1| ribosomal protein L3, isoform CRA_c [Homo sapiens]
Length = 91
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 61/76 (80%)
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHG 372
GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHG
Sbjct: 6 GGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHG 65
Query: 373 RFQTTQEKAKYYGRLK 388
RFQT +EK + G LK
Sbjct: 66 RFQTMEEKKAFMGPLK 81
>gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 301
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 141/327 (43%), Gaps = 50/327 (15%)
Query: 20 KRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTII 79
KR GKV+ K++ + F GYK GM + S K E T++
Sbjct: 10 KRPYNTFGKVENLEKNE------IGGFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVL 63
Query: 80 ETPPLVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYET 139
E+PPL V + Y K S+ W +N+ V R+ K E
Sbjct: 64 ESPPLFVCALRFYNKG----SSIGESWGSGINKFVARQ----------------VKFKEN 103
Query: 140 DDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQKVDFAY 199
+ D + + + IR++ TQ K+ +KK + E+ + GG++ K+
Sbjct: 104 NKSVDDFKGKFDD-------IRLIVSTQPWKID--LKKKPEVFELCI-GGNLEDKLTLGK 153
Query: 200 GFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWH 259
K+I +V + +D+ VTKGKG+ G V R+GV P + RK +GA
Sbjct: 154 ELLSKEIEASSVIKDGNFVDVASVTKGKGFTGSVKRYGVKIYPVHASKSRRKAGNLGAES 213
Query: 260 PARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYG 319
A+V FTV + G+ G++ R E NK ++++ K + E + G+ YG
Sbjct: 214 MAKVQFTVPQHGRLGFNSRVEYNKFVFRVIKDADE--------------VNIPSGYKRYG 259
Query: 320 VVNEDYLLIKGCCVGPKKRVVTLRQSL 346
V +++KG G R++ LR+++
Sbjct: 260 NVKGSAIILKGSVPGSASRLIMLRKAI 286
>gi|159145604|gb|ABW90339.1| putative ribosomal protein L3 [Sipunculus nudus]
Length = 59
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 51/59 (86%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRD 59
MSHR F PRHGSLGFLP+KR+ RHRG+VKAFPKDD SKP LTAFL YKAGMTH+VR+
Sbjct: 1 MSHRTFSAPRHGSLGFLPKKRSKRHRGEVKAFPKDDASKPVHLTAFLTYKAGMTHVVRE 59
>gi|3088345|dbj|BAA25828.1| ribosomal protein L3 [Homo sapiens]
Length = 71
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 54/66 (81%)
Query: 323 EDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAK 382
D++++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK
Sbjct: 1 NDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKA 60
Query: 383 YYGRLK 388
+ G LK
Sbjct: 61 FMGPLK 66
>gi|402873252|ref|XP_003900497.1| PREDICTED: ribosomal protein L3-like [Papio anubis]
Length = 201
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 56/75 (74%)
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D +EK I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL Q AL
Sbjct: 81 NNASTDYDLSEKSINPLGGFVHYGEVTNDFVMLKGCVVGTKKRVLTLRKSLLVQMKWQAL 140
Query: 356 EEIKLKFIDTSSKFG 370
E++ LKFIDT+S
Sbjct: 141 EKMDLKFIDTTSNLA 155
>gi|300078561|gb|ADJ67187.1| ribosomal protein L3-like protein [Jatropha curcas]
Length = 91
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLL 347
H+A+TE+DRTEK I P+GGFPHYG V +DY++IKGCCVG KKRVVTLRQS L
Sbjct: 1 HTAITEYDRTEKGINPIGGFPHYGEVKDDYIMIKGCCVGTKKRVVTLRQSSL 52
>gi|119580722|gb|EAW60318.1| ribosomal protein L3, isoform CRA_h [Homo sapiens]
Length = 72
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
++KGC VG KKRV+TLR+SLL QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G
Sbjct: 1 MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGP 60
Query: 387 LK 388
LK
Sbjct: 61 LK 62
>gi|149498722|ref|XP_001519230.1| PREDICTED: 60S ribosomal protein L3-like, partial [Ornithorhynchus
anatinus]
Length = 62
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 49/56 (87%)
Query: 174 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
L+QKK+HLMEIQVNGGS+A+KVD+A E+Q+P+ VF +DEMID+IGVTKGKGY
Sbjct: 6 LRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVTKGKGY 61
>gi|361069403|gb|AEW09013.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173202|gb|AFG69988.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173204|gb|AFG69989.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173206|gb|AFG69990.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173208|gb|AFG69991.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173210|gb|AFG69992.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173212|gb|AFG69993.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173214|gb|AFG69994.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173216|gb|AFG69995.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173218|gb|AFG69996.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173220|gb|AFG69997.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173222|gb|AFG69998.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173224|gb|AFG69999.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173226|gb|AFG70000.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173228|gb|AFG70001.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173230|gb|AFG70002.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
gi|383173232|gb|AFG70003.1| Pinus taeda anonymous locus CL3161Contig1_04 genomic sequence
Length = 47
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/47 (89%), Positives = 44/47 (93%)
Query: 343 RQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
RQSLLKQTSR ALEEIKLKFIDTSSKFGHGRFQT QEKAK +G+LKA
Sbjct: 1 RQSLLKQTSRTALEEIKLKFIDTSSKFGHGRFQTIQEKAKIFGKLKA 47
>gi|13383338|gb|AAK20934.1| ribosomal protein L3 [Mus musculus]
Length = 67
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 49/62 (79%)
Query: 296 HSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTSRLAL 355
++A T++D ++K I P+GGF HYG V D++++KGC VG KKRV+TLR+SLL QT R AL
Sbjct: 6 NNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRAL 65
Query: 356 EE 357
E+
Sbjct: 66 EK 67
>gi|377824634|gb|AFB77873.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824636|gb|AFB77874.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824638|gb|AFB77875.1| 60S ribosomal protein L3, partial [Discoglossus montalentii]
gi|377824652|gb|AFB77882.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
gi|377824654|gb|AFB77883.1| 60S ribosomal protein L3, partial [Discoglossus pictus]
gi|377824656|gb|AFB77884.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
gi|377824658|gb|AFB77885.1| 60S ribosomal protein L3, partial [Discoglossus jeanneae]
gi|377824660|gb|AFB77886.1| 60S ribosomal protein L3, partial [Discoglossus scovazzi]
gi|377824662|gb|AFB77887.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
gi|377824664|gb|AFB77888.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
gi|377824666|gb|AFB77889.1| 60S ribosomal protein L3, partial [Discoglossus galganoi galganoi]
Length = 54
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
KK+HLMEIQVNGG++A+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAISGVFGQDEMIDVIGVTKGKGY 53
>gi|377824640|gb|AFB77876.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824642|gb|AFB77877.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824644|gb|AFB77878.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824646|gb|AFB77879.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824648|gb|AFB77880.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
gi|377824650|gb|AFB77881.1| 60S ribosomal protein L3, partial [Discoglossus sardus]
Length = 54
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 45/53 (84%)
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGY 229
KK+HLMEIQVNGG++A+KVD+A E+Q+ I VF +DEMID+IGVTKGKGY
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWAREKLEQQVAIGGVFGQDEMIDVIGVTKGKGY 53
>gi|377824668|gb|AFB77890.1| 60S ribosomal protein L3, partial [Alytes obstetricans]
Length = 54
Score = 78.2 bits (191), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 177 KKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 230
KK+HLMEIQVNGG++A+KVD+A E+Q+ I+ VF +DEMID+IGVTKGKGY+
Sbjct: 1 KKSHLMEIQVNGGTIAEKVDWACEKLEQQVAINGVFGQDEMIDVIGVTKGKGYK 54
>gi|167043662|gb|ABZ08355.1| hypothetical protein ALOHA_HF4000APKG2O16ctg10g1, partial
[uncultured marine crenarchaeote HF4000_APKG2O16]
Length = 106
Score = 77.8 bits (190), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKAFPKDDPSKPCRLTAFLGYKAGMTHIVRDV 60
M HR+ PR GSL +LPR RA +++A+PK + +P +L A G+KAG IV
Sbjct: 1 MGHRRHSAPRRGSLAYLPRGRAKSMEARIRAWPKVNSDEP-KLLAHAGFKAGCVQIVNID 59
Query: 61 EKPGSKLHKKETCEAVTIIETPPLVVVGVVGYVKTPRG 98
++ + H K+ T+I TPP+++ G+ GY K P G
Sbjct: 60 DREKTPNHGKQLVSLGTVIVTPPILIAGIRGYSKDPDG 97
>gi|281204059|gb|EFA78255.1| hypothetical protein PPL_08906 [Polysphondylium pallidum PN500]
Length = 69
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Query: 327 LIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGR 386
+IKGC +GP+K V+TLR+SL TSR ALE++ LKFIDTSSKF RFQT+ EK+K G
Sbjct: 1 MIKGCVIGPRKIVLTLRKSLHAATSRPALEKVVLKFIDTSSKF--SRFQTSDEKSKVMGP 58
Query: 387 LK 388
+K
Sbjct: 59 MK 60
>gi|77417051|gb|ABA81918.1| 60S ribosomal protein L3 [Larix laricina]
gi|77417053|gb|ABA81919.1| 60S ribosomal protein L3 [Larix decidua]
gi|77417055|gb|ABA81920.1| 60S ribosomal protein L3 [Larix kaempferi]
gi|77417057|gb|ABA81921.1| 60S ribosomal protein L3 [Larix gmelinii]
gi|77417059|gb|ABA81922.1| 60S ribosomal protein L3 [Larix mastersiana]
gi|77417061|gb|ABA81923.1| 60S ribosomal protein L3 [Larix griffithiana]
gi|77417063|gb|ABA81924.1| 60S ribosomal protein L3 [Larix potaninii]
gi|77417065|gb|ABA81925.1| 60S ribosomal protein L3 [Larix lyallii]
gi|77417067|gb|ABA81926.1| 60S ribosomal protein L3 [Larix occidentalis]
gi|77417069|gb|ABA81927.1| 60S ribosomal protein L3 [Larix sibirica]
Length = 35
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/35 (91%), Positives = 34/35 (97%)
Query: 355 LEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
LEEIKLKFIDTSSKFGHGRFQTTQEKAK +G+LKA
Sbjct: 1 LEEIKLKFIDTSSKFGHGRFQTTQEKAKIFGKLKA 35
>gi|355749269|gb|EHH53668.1| hypothetical protein EGM_14349, partial [Macaca fascicularis]
Length = 67
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 333 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
VG KK+V+TL +S L QT ALE+I LKFIDT+SKFGHGRFQT EK + G LK
Sbjct: 2 VGTKKQVLTLCKSSLMQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLK 57
>gi|355687279|gb|EHH25863.1| hypothetical protein EGK_15713, partial [Macaca mulatta]
Length = 67
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 42/56 (75%)
Query: 333 VGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
VG KK+V+TL +S L QT ALE+I LKFIDT+SKFGHGRFQT EK + G LK
Sbjct: 2 VGTKKQVLTLCKSSLVQTKWRALEKIDLKFIDTTSKFGHGRFQTIGEKKAFMGPLK 57
>gi|6049122|gb|AAF02464.1|AF127447_1 60S ribosomal protein L3 [Picea abies]
gi|6049124|gb|AAF02465.1|AF127448_1 60S ribosomal protein L3 [Picea abies]
Length = 33
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/33 (90%), Positives = 32/33 (96%)
Query: 357 EIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLKA 389
EIKLKFIDTSSKFGHGRFQTTQEKAK +G+LKA
Sbjct: 1 EIKLKFIDTSSKFGHGRFQTTQEKAKIFGKLKA 33
>gi|380476695|emb|CCF44574.1| hypothetical protein CH063_13930 [Colletotrichum higginsianum]
Length = 55
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 340 VTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+TLR+S+ TSR ALE+I LK+IDTSS+FGHG FQT EK +Y G LK
Sbjct: 1 MTLRKSMFTHTSRKALEKIDLKWIDTSSEFGHGAFQTPAEKKQYQGTLK 49
>gi|70950437|ref|XP_744542.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524538|emb|CAH89171.1| hypothetical protein PC001170.02.0 [Plasmodium chabaudi chabaudi]
Length = 45
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 32/40 (80%)
Query: 349 QTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
Q SR AL ++ LKFIDTSSK GHGRFQT+ EK KYYG LK
Sbjct: 1 QVSRDALSQVSLKFIDTSSKLGHGRFQTSDEKVKYYGPLK 40
>gi|285025766|gb|ADC33744.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025768|gb|ADC33745.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025770|gb|ADC33746.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025772|gb|ADC33747.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025774|gb|ADC33748.1| ribosomal protein L3 [Pelodytes ibericus]
gi|285025776|gb|ADC33749.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025778|gb|ADC33750.1| ribosomal protein L3 [Pelodytes ibericus]
gi|285025780|gb|ADC33751.1| ribosomal protein L3 [Pelodytes punctatus]
gi|285025782|gb|ADC33752.1| ribosomal protein L3 [Pelodytes punctatus]
Length = 45
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/45 (57%), Positives = 38/45 (84%)
Query: 186 VNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYE 230
VNGG++++KVD+A E+Q+ ++ VF +DEMID+IGVTKGKGY+
Sbjct: 1 VNGGTISEKVDWAREKLEQQVAVNGVFGQDEMIDVIGVTKGKGYK 45
>gi|119630151|gb|EAX09746.1| hCG1794419, isoform CRA_b [Homo sapiens]
Length = 112
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 336 KKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
+KRV+ L SLL QT R ALE+ LKF DT+SKFG+GRFQT +EK + G L+
Sbjct: 50 EKRVLILCTSLLVQTRRWALEKTDLKFTDTTSKFGYGRFQTMEEKKAFMGPLE 102
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 98 GLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYETDDGKKDIQAQL 150
GLR+ ++A+H+N+E +R F N KS+KKAFTKY KK++ +DGKK ++ ++
Sbjct: 1 GLRTFKAIFAEHINDECKRCFSNNRHKSRKKAFTKYCKKWQDEDGKKQLEKRV 53
>gi|85812201|gb|ABC84238.1| Rpl13 [Bos taurus]
Length = 50
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 349 QTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
QT R ALE+I LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 1 QTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 40
>gi|332105487|gb|AEE01375.1| ribosomal protein L3 [Bubalus bubalis]
Length = 51
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (77%)
Query: 349 QTSRLALEEIKLKFIDTSSKFGHGRFQTTQEKAKYYGRLK 388
QT R AL EI LKFIDT+SKFGHGRFQT +EK + G LK
Sbjct: 2 QTKRRALREIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLK 41
>gi|119602066|gb|EAW81660.1| hCG22885, isoform CRA_a [Homo sapiens]
Length = 97
Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 263 VSFTVARAGQNGYHHRTEMNKKIYKLGK------ASQESHSAMTEFDRTEKDITPM 312
+ F+VARAGQ GYHHRTE+NKKIYK+G+ ++A T++D ++K I P+
Sbjct: 28 IKFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPL 83
>gi|220930965|ref|YP_002507873.1| 50S ribosomal protein L3 [Halothermothrix orenii H 168]
gi|254803676|sp|B8D0C4.1|RL3_HALOH RecName: Full=50S ribosomal protein L3
gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168]
Length = 211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 135 KKYETDDGKKDIQAQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGSVAQK 194
KK E DG +Q E + ++ + H + G+K KK H+ E
Sbjct: 38 KKVEERDGYNALQVGFEDVPEHRVNKPLKGHFE---RAGVKPKK-HVKEF---------- 83
Query: 195 VDFAYGFFE-KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKV 252
+DF E +I +D +F++ E++D+ G++KGKG+ G + RW +R P R R
Sbjct: 84 MDFPEDLNEGDEITVD-IFEEGELVDVTGISKGKGFAGTIKRWNFSRGPMSHGSRFHRAP 142
Query: 253 ACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPM 312
IGA +RV G+ G+ T N ++ ++ +EK++
Sbjct: 143 GSIGAVDASRVFKGQKLPGRMGHDRVTIQNLEVVRV---------------DSEKNL--- 184
Query: 313 GGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQSLLKQTS 351
LLIKG GP K ++T+R+++ K ++
Sbjct: 185 -------------LLIKGSVPGPNKGILTIREAVKKASN 210
>gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
12042]
gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
12042]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 38/148 (25%)
Query: 204 KQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAW----- 258
++ +D +F E++D+ G +KG+GY G + R T P KTH G + + IG+
Sbjct: 94 NEVKVD-LFAAGEIVDVTGTSKGRGYNGTIVRNNATMGP-KTHGGSKNMRHIGSLATTGR 151
Query: 259 HPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHY 318
+ R+ A AGQ G + T N +I K+
Sbjct: 152 NNGRIEKGTAGAGQEGGYTTTTQNLEIIKVD----------------------------- 182
Query: 319 GVVNEDYLLIKGCCVGPKKRVVTLRQSL 346
V +Y+LIKG GPK+ +V ++ S+
Sbjct: 183 --VENNYMLIKGNVPGPKRGLVVVKSSV 208
>gi|340621220|ref|YP_004739671.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
gi|339901485|gb|AEK22564.1| 50S ribosomal protein L3 [Capnocytophaga canimorsus Cc5]
Length = 205
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 41/179 (22%)
Query: 175 KQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPI-DAV----FQKDEMIDIIGVTKGKGY 229
+ KA L + G SV +KV + FEK+ I DA+ F + E +DI G++KGKG+
Sbjct: 59 RANKAELGHFKKAGSSVKKKV-VEFQGFEKEYKIGDAISVELFSEGEFVDITGISKGKGF 117
Query: 230 EGVVTRWGVTRLPRKT---HRGLRKVACIGA-WHPARVSFTVARAGQNGYHHRTEMNKKI 285
+GVV R G + + T H LR IGA +P+RV + AG+ G T N K+
Sbjct: 118 QGVVKRHGFGGVGQSTHGQHNRLRAPGSIGASSYPSRVFKGMRMAGRMGAEKVTVQNLKV 177
Query: 286 YKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQ 344
K+ V ++ L++KGC G K VT+ +
Sbjct: 178 LKV-------------------------------VPEKNLLIVKGCVPGHKNAYVTIHK 205
>gi|404486839|ref|ZP_11022027.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
gi|404335893|gb|EJZ62359.1| 50S ribosomal protein L3 [Barnesiella intestinihominis YIT 11860]
Length = 204
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 206 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 261
I +D +F+ E +D+IGV+KGKG++GVV R G + + T H LR IGA +PA
Sbjct: 94 IAVD-LFEGAEYVDVIGVSKGKGFQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 152
Query: 262 RVSFTVARAGQNGYHHRTEMNKKIYKL 288
RV AGQ G H T N ++ K+
Sbjct: 153 RVFKGTRMAGQMGNHRVTVQNLQVLKV 179
>gi|365121785|ref|ZP_09338699.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
gi|363644386|gb|EHL83673.1| 50S ribosomal protein L3 [Tannerella sp. 6_1_58FAA_CT1]
Length = 205
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 206 IPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKT---HRGLRKVACIGAW-HPA 261
I ID +F +D+ +D++G +KGKGY+GVV R G + + T H LR IGA +PA
Sbjct: 95 ISID-LFAEDDFVDVVGTSKGKGYQGVVKRHGFGGVGQTTHGQHNRLRAPGSIGACSYPA 153
Query: 262 RVSFTVARAGQNGYHHRTEMNKKIYKL 288
RV AGQ G T N ++ K+
Sbjct: 154 RVFKGTRMAGQTGNERVTVQNLQVLKV 180
>gi|449708198|gb|EMD47703.1| 60S ribosomal protein L3, partial [Entamoeba histolytica KU27]
Length = 56
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 84 LVVVGVVGYVKTPRGLRSLCTVWAQHLNEEVRRRFYKNWCKSKKKAFTKYTKKYE 138
+VV G VGY KT GL+ + V+A+H+ +E +RR+ K W K+ K F +T+KY
Sbjct: 1 MVVAGFVGYKKTTTGLKPITAVFAEHIADEFKRRYTKKWYKNTKNQFAVHTEKYN 55
>gi|294893394|ref|XP_002774450.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
50983]
gi|239879843|gb|EER06266.1| hypothetical protein Pmar_PMAR006031 [Perkinsus marinus ATCC
50983]
Length = 54
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 1 MSHRKFEHPRHGSLGFLPRKRASRHRGKVKA 31
MSHRKFE PRHGSLGFLPRKR H+GKVK+
Sbjct: 1 MSHRKFEVPRHGSLGFLPRKRTRHHKGKVKS 31
>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
gi|166990941|sp|A0LIJ0.1|RL3_SYNFM RecName: Full=50S ribosomal protein L3
gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
Length = 210
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 33/137 (24%)
Query: 211 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRK-THRGLRKVACIG-AWHPARVSFTVA 268
VF+ E ID+IG TKGKGY G + RWG R P + +R+ G A P RV
Sbjct: 101 VFEIGERIDVIGTTKGKGYAGTIKRWGFQRGPSGHGSKNIREPGSTGNATFPGRVIKGKK 160
Query: 269 RAGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKDITPMGGFPHYGVVNEDYLLI 328
GQ G T MN +I D+ P E+ L++
Sbjct: 161 MPGQKGNKRTTVMNLRII---------------------DVRP----------EENLLIV 189
Query: 329 KGCCVGPKKRVVTLRQS 345
KG G + +V +R++
Sbjct: 190 KGAVPGSQNGIVLIRKT 206
>gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
gi|158433717|gb|EDP12006.1| 50S ribosomal protein L3 [Eubacterium dolichum DSM 3991]
Length = 234
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 196 DFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACI 255
DFA ++ +D +F E +D+IG +KGKGY G + R + P KTH G + + I
Sbjct: 91 DFADLDLGAEVKVD-IFVAGETVDVIGTSKGKGYNGTIVRNNAHQGP-KTHGGSKNIRHI 148
Query: 256 GAWHPARVSFTVAR-------AGQNGYHHRTEMNKKIYKLGKASQESHSAMTEFDRTEKD 308
G+ ++ + AGQ G + T N + K+
Sbjct: 149 GSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLTVIKVD------------------- 189
Query: 309 ITPMGGFPHYGVVNEDYLLIKGCCVGPKKRVVTLRQS 345
V +YLLIKG GPK+ +V +R +
Sbjct: 190 ------------VENNYLLIKGNVPGPKRGLVMVRSA 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,218,435,562
Number of Sequences: 23463169
Number of extensions: 256940143
Number of successful extensions: 565034
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1330
Number of HSP's successfully gapped in prelim test: 943
Number of HSP's that attempted gapping in prelim test: 560817
Number of HSP's gapped (non-prelim): 2697
length of query: 389
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 245
effective length of database: 8,980,499,031
effective search space: 2200222262595
effective search space used: 2200222262595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)