Query 016470
Match_columns 389
No_of_seqs 534 out of 3488
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:07:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016470.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016470hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 7.6E-29 2.6E-33 214.2 9.7 137 1-145 17-156 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 5.2E-27 1.8E-31 217.8 7.9 160 2-188 67-229 (269)
3 3aji_A 26S proteasome non-ATPa 99.9 1.3E-25 4.4E-30 202.2 10.3 161 2-189 54-217 (231)
4 1yyh_A HN1;, notch 1, ankyrin 99.9 8E-26 2.8E-30 207.2 9.0 182 2-189 37-235 (253)
5 1oy3_D Transcription factor in 99.9 8.3E-26 2.8E-30 209.1 8.4 119 47-189 151-270 (282)
6 4gpm_A Engineered protein OR26 99.9 1.2E-25 3.9E-30 194.2 8.4 138 27-188 7-147 (169)
7 1s70_B 130 kDa myosin-binding 99.9 1.6E-25 5.6E-30 209.4 9.2 160 2-188 54-276 (299)
8 3b7b_A Euchromatic histone-lys 99.9 7.8E-25 2.7E-29 197.8 11.8 181 2-189 25-222 (237)
9 2rfa_A Transient receptor pote 99.9 1.1E-24 3.8E-29 196.3 12.5 166 2-188 17-208 (232)
10 2f8y_A Notch homolog 1, transl 99.9 9.2E-25 3.1E-29 195.5 11.5 181 2-188 5-202 (223)
11 2y1l_E Darpin-8.4; hydrolase-i 99.9 7.8E-25 2.7E-29 188.2 10.1 133 1-141 27-162 (169)
12 2dzn_A Probable 26S proteasome 99.9 3.6E-25 1.2E-29 198.7 8.2 163 2-187 50-218 (228)
13 3hra_A Ankyrin repeat family p 99.9 6.7E-25 2.3E-29 193.2 9.4 166 2-188 19-189 (201)
14 2xai_A ASB-9, ankyrin repeat a 99.9 1.1E-24 3.9E-29 200.6 11.0 177 2-187 17-209 (261)
15 1awc_B Protein (GA binding pro 99.9 8.1E-25 2.8E-29 184.8 8.7 131 2-141 16-149 (153)
16 2etb_A Transient receptor pote 99.9 3.9E-24 1.3E-28 196.0 13.2 167 3-189 21-233 (256)
17 2vge_A RELA-associated inhibit 99.9 3.5E-25 1.2E-29 200.5 6.0 136 4-144 1-142 (229)
18 3v30_A DNA-binding protein rfx 99.9 2.6E-24 8.8E-29 185.1 10.9 132 2-141 16-151 (172)
19 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.7E-24 5.7E-29 184.2 9.3 132 2-141 19-153 (162)
20 1k1a_A B-cell lymphoma 3-encod 99.9 1.1E-24 3.7E-29 197.1 8.2 180 2-188 23-227 (241)
21 4b93_B Ankyrin repeat domain-c 99.9 3.5E-24 1.2E-28 198.7 11.9 129 1-137 99-230 (269)
22 3b7b_A Euchromatic histone-lys 99.9 2.4E-24 8.4E-29 194.6 10.4 168 13-188 3-188 (237)
23 1yyh_A HN1;, notch 1, ankyrin 99.9 1.1E-24 3.7E-29 199.6 7.8 147 37-188 39-201 (253)
24 1oy3_D Transcription factor in 99.9 7.9E-25 2.7E-29 202.5 6.5 160 2-188 23-236 (282)
25 2f8y_A Notch homolog 1, transl 99.9 9.1E-25 3.1E-29 195.6 6.6 132 2-141 39-174 (223)
26 3d9h_A CDNA FLJ77766, highly s 99.9 6.8E-24 2.3E-28 198.1 12.6 177 2-187 73-265 (285)
27 2rfm_A Putative ankyrin repeat 99.9 2E-24 6.8E-29 189.3 8.1 133 1-141 48-183 (192)
28 1sw6_A Regulatory protein SWI6 99.9 3.1E-25 1.1E-29 211.5 3.1 164 2-187 111-326 (327)
29 3v31_A Ankyrin repeat family A 99.9 2.9E-24 1E-28 183.9 8.4 132 2-141 17-151 (167)
30 3utm_A Tankyrase-1; tankyrase, 99.9 3.8E-24 1.3E-28 203.8 10.0 178 2-187 72-323 (351)
31 1n11_A Ankyrin; clathrin, BAND 99.9 7.7E-24 2.6E-28 209.0 11.0 180 2-189 193-389 (437)
32 2rfm_A Putative ankyrin repeat 99.9 3.5E-24 1.2E-28 187.8 7.3 143 22-188 33-178 (192)
33 1ikn_D Protein (I-kappa-B-alph 99.9 5.9E-24 2E-28 192.4 9.0 160 2-188 22-195 (236)
34 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.1E-23 3.8E-28 178.0 9.9 130 2-141 16-149 (156)
35 3f6q_A Integrin-linked protein 99.9 1.3E-23 4.4E-28 182.1 10.0 132 2-141 19-154 (179)
36 3twr_A Tankyrase-2; ankyrin re 99.9 1.6E-23 5.5E-28 178.9 10.4 131 2-141 22-156 (165)
37 1ikn_D Protein (I-kappa-B-alph 99.9 1.9E-24 6.5E-29 195.6 4.4 160 2-186 59-228 (236)
38 3v31_A Ankyrin repeat family A 99.9 1.7E-23 5.8E-28 179.1 9.5 141 24-188 3-146 (167)
39 3c5r_A BARD-1, BRCA1-associate 99.9 1.5E-23 5.2E-28 173.6 8.4 125 11-144 1-128 (137)
40 3ljn_A Hypothetical protein; a 99.9 1.6E-23 5.3E-28 202.0 9.1 178 2-188 34-255 (364)
41 1wdy_A 2-5A-dependent ribonucl 99.9 3.1E-23 1.1E-27 191.5 10.5 179 2-188 53-264 (285)
42 2dzn_A Probable 26S proteasome 99.9 2.1E-23 7.1E-28 187.2 8.9 161 2-188 16-185 (228)
43 1d9s_A Cyclin-dependent kinase 99.9 6.3E-24 2.1E-28 175.9 4.7 122 11-141 2-127 (136)
44 2xai_A ASB-9, ankyrin repeat a 99.9 5.2E-23 1.8E-27 189.4 11.4 158 2-187 83-248 (261)
45 1k1a_A B-cell lymphoma 3-encod 99.9 3.3E-23 1.1E-27 187.3 9.8 166 22-188 7-194 (241)
46 3kea_A K1L; tropism, ANK repea 99.9 4E-23 1.4E-27 193.0 10.4 174 3-188 15-206 (285)
47 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2E-23 6.9E-28 189.8 8.1 133 2-143 19-157 (239)
48 3jxi_A Vanilloid receptor-rela 99.9 1.1E-22 3.6E-27 186.6 12.4 176 3-189 24-237 (260)
49 3hra_A Ankyrin repeat family p 99.9 4.7E-23 1.6E-27 181.3 9.5 133 2-141 53-194 (201)
50 3aji_A 26S proteasome non-ATPa 99.9 2.6E-23 8.8E-28 187.1 8.0 132 2-141 87-221 (231)
51 2y1l_E Darpin-8.4; hydrolase-i 99.9 3.7E-23 1.3E-27 177.7 8.1 143 22-188 12-157 (169)
52 4g8k_A 2-5A-dependent ribonucl 99.9 1.1E-22 3.9E-27 193.8 12.0 181 1-188 38-284 (337)
53 4hbd_A KN motif and ankyrin re 99.9 8.2E-24 2.8E-28 196.8 3.4 161 2-188 90-261 (276)
54 2etb_A Transient receptor pote 99.9 1.8E-23 6E-28 191.6 5.4 137 1-141 59-237 (256)
55 1wdy_A 2-5A-dependent ribonucl 99.9 1E-22 3.6E-27 187.9 9.9 181 1-188 18-230 (285)
56 3eu9_A Huntingtin-interacting 99.9 7.1E-22 2.4E-26 177.9 14.7 179 2-188 23-221 (240)
57 2fo1_E LIN-12 protein; beta-ba 99.9 3.7E-23 1.3E-27 200.6 6.6 178 3-188 148-357 (373)
58 2vge_A RELA-associated inhibit 99.9 2.8E-23 9.5E-28 188.0 5.3 137 2-142 35-205 (229)
59 3twr_A Tankyrase-2; ankyrin re 99.9 4.4E-23 1.5E-27 176.2 6.0 144 22-189 6-153 (165)
60 3v30_A DNA-binding protein rfx 99.9 6.9E-23 2.4E-27 176.1 7.3 140 25-188 3-146 (172)
61 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.1E-22 3.6E-27 173.0 8.2 142 23-188 4-148 (162)
62 4hbd_A KN motif and ankyrin re 99.9 8.2E-23 2.8E-27 190.0 8.0 132 2-141 125-266 (276)
63 1n11_A Ankyrin; clathrin, BAND 99.9 1.8E-22 6.2E-27 199.2 10.8 179 2-188 160-355 (437)
64 3utm_A Tankyrase-1; tankyrase, 99.9 1.9E-22 6.4E-27 192.1 10.4 113 2-122 38-154 (351)
65 1awc_B Protein (GA binding pro 99.9 9.5E-23 3.3E-27 172.1 7.4 139 26-189 4-145 (153)
66 2pnn_A Transient receptor pote 99.9 1.8E-22 6.3E-27 186.7 9.9 176 2-188 27-244 (273)
67 3f6q_A Integrin-linked protein 99.9 8.5E-23 2.9E-27 177.0 6.8 141 24-188 5-149 (179)
68 2rfa_A Transient receptor pote 99.9 1.2E-22 4E-27 183.0 7.9 139 2-141 51-213 (232)
69 3jxi_A Vanilloid receptor-rela 99.9 7.8E-23 2.7E-27 187.6 6.5 136 1-141 62-241 (260)
70 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-22 4E-27 168.2 6.5 115 22-141 12-129 (136)
71 3aaa_C Myotrophin, protein V-1 99.9 1.9E-22 6.6E-27 163.9 7.6 109 22-135 5-116 (123)
72 1bi7_B P16INK4A, MTS1, multipl 99.9 4.1E-23 1.4E-27 175.1 3.6 136 22-182 10-149 (156)
73 1bi7_B P16INK4A, MTS1, multipl 99.9 5E-22 1.7E-26 168.4 10.0 122 2-132 26-151 (156)
74 2pnn_A Transient receptor pote 99.9 9.2E-23 3.1E-27 188.7 4.9 136 1-141 70-249 (273)
75 1sw6_A Regulatory protein SWI6 99.9 3.3E-22 1.1E-26 190.5 8.8 129 1-136 144-327 (327)
76 3kea_A K1L; tropism, ANK repea 99.9 1.5E-22 5.2E-27 189.0 6.0 92 46-144 23-114 (285)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.3E-22 7.7E-27 170.0 6.2 138 25-188 3-144 (156)
78 2fo1_E LIN-12 protein; beta-ba 99.9 7.2E-22 2.5E-26 191.5 10.1 178 3-188 108-324 (373)
79 1s70_B 130 kDa myosin-binding 99.9 2.1E-21 7.3E-26 181.4 11.9 114 23-141 39-155 (299)
80 3t8k_A Uncharacterized protein 99.8 1.2E-22 4.2E-27 177.9 2.6 131 2-141 20-170 (186)
81 3ljn_A Hypothetical protein; a 99.8 3.9E-22 1.3E-26 192.1 5.7 134 2-143 98-262 (364)
82 3deo_A Signal recognition part 99.8 1.2E-21 4E-26 170.7 6.5 110 22-137 42-155 (183)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.9E-21 6.5E-26 157.5 7.0 113 24-141 2-117 (126)
84 3d9h_A CDNA FLJ77766, highly s 99.8 2.8E-21 9.5E-26 180.4 9.1 133 2-144 106-241 (285)
85 1d9s_A Cyclin-dependent kinase 99.8 1.4E-20 5E-25 155.5 10.6 107 2-113 26-136 (136)
86 3c5r_A BARD-1, BRCA1-associate 99.8 1.9E-21 6.4E-26 160.9 4.6 120 44-188 1-120 (137)
87 3t8k_A Uncharacterized protein 99.8 3.6E-21 1.2E-25 168.5 6.6 153 26-200 8-178 (186)
88 3eu9_A Huntingtin-interacting 99.8 6E-21 2E-25 171.8 7.9 136 2-144 56-196 (240)
89 3ehr_A Osteoclast-stimulating 99.8 2E-21 6.7E-26 174.3 4.2 119 23-145 72-193 (222)
90 2b0o_E UPLC1; arfgap, structur 99.8 1.5E-20 5E-25 177.2 9.9 126 2-138 165-299 (301)
91 3ui2_A Signal recognition part 99.8 3.4E-20 1.2E-24 169.1 11.6 108 22-135 43-154 (244)
92 2jab_A H10-2-G3; HER2, darpin, 99.8 6.6E-20 2.2E-24 151.6 11.1 106 2-111 28-136 (136)
93 4g8k_A 2-5A-dependent ribonucl 99.8 1.6E-20 5.6E-25 178.8 7.8 129 2-142 182-318 (337)
94 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.2E-20 1.1E-24 168.6 8.3 128 2-137 51-193 (239)
95 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.6E-19 8.9E-24 144.8 10.9 108 2-113 16-126 (126)
96 3jue_A Arfgap with coiled-coil 99.8 1.5E-19 5.2E-24 174.6 9.4 143 24-187 199-347 (368)
97 2b0o_E UPLC1; arfgap, structur 99.8 4.7E-20 1.6E-24 173.7 5.1 133 26-188 153-297 (301)
98 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.6E-19 1.6E-23 136.6 9.2 89 24-113 2-93 (93)
99 3aaa_C Myotrophin, protein V-1 99.8 1.1E-19 3.8E-24 147.4 4.2 113 50-186 3-115 (123)
100 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2.2E-19 7.4E-24 138.4 5.3 84 53-141 1-84 (93)
101 2l6b_A NR1C; ankyrin, consensu 99.8 3.7E-19 1.3E-23 142.4 6.4 103 22-129 7-112 (115)
102 1dcq_A PYK2-associated protein 99.8 3.6E-19 1.2E-23 165.7 7.1 112 25-141 131-254 (278)
103 3lvq_E ARF-GAP with SH3 domain 99.8 1.4E-18 4.8E-23 174.7 11.5 122 2-134 146-276 (497)
104 1dcq_A PYK2-associated protein 99.8 1.9E-18 6.4E-23 160.8 10.8 122 2-136 144-274 (278)
105 3jue_A Arfgap with coiled-coil 99.7 5.1E-18 1.8E-22 163.9 11.3 131 2-135 214-347 (368)
106 3deo_A Signal recognition part 99.7 7.9E-19 2.7E-23 152.6 5.0 114 50-188 40-154 (183)
107 3lvq_E ARF-GAP with SH3 domain 99.7 8.7E-19 3E-23 176.3 5.3 114 26-144 134-259 (497)
108 3ehr_A Osteoclast-stimulating 99.7 1.7E-18 5.9E-23 155.0 5.8 108 2-113 87-198 (222)
109 2l6b_A NR1C; ankyrin, consensu 99.7 1.2E-18 4.2E-23 139.4 3.6 109 49-181 4-112 (115)
110 3ui2_A Signal recognition part 99.7 5.1E-18 1.7E-22 154.7 4.7 114 2-141 59-176 (244)
111 2zgd_A 3 repeat synthetic anky 99.7 4.8E-18 1.6E-22 135.2 3.7 90 47-141 17-106 (110)
112 2aja_A Ankyrin repeat family p 99.7 4.3E-18 1.5E-22 164.9 -1.8 129 2-146 80-220 (376)
113 2aja_A Ankyrin repeat family p 99.7 5.7E-18 1.9E-22 164.1 -1.2 131 1-144 105-244 (376)
114 2zgd_A 3 repeat synthetic anky 99.6 7.4E-16 2.5E-20 122.4 8.4 85 22-107 22-109 (110)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.95 E-value=7.6e-29 Score=214.19 Aligned_cols=137 Identities=23% Similarity=0.312 Sum_probs=128.2
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+|+|+.|+++|+|+|.+| ..+.||||.|+..+..+ .|+++|++++.+|.+|+||||+|+..|+.+++++|+ ++
T Consensus 17 ~~~v~~Ll~~Gadvn~~d---~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-~~ 92 (169)
T 4gpm_A 17 KDRVKDLIENGADVNASD---SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-SK 92 (169)
T ss_dssp HHHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHHCCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-HC
Confidence 378999999999999988 66778899999999877 889999999999999999999999999999999999 88
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCC
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKME 145 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~ 145 (389)
|++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|++.++.++++.+.
T Consensus 93 gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 93 GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999888775443
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.93 E-value=5.2e-27 Score=217.83 Aligned_cols=160 Identities=18% Similarity=0.165 Sum_probs=135.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..| ..|.||||+|+..|+.+ +|+++|++++.++.+|.||+|.|+..++.++++.|+ ..|
T Consensus 67 ~~v~~Ll~~Gadvn~~d---~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~g 142 (269)
T 4b93_B 67 KRLAKVPASGLGVNVTS---QDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLL-DSN 142 (269)
T ss_dssp --------CCCCTTCCC---TTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcC---CCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHH-HCC
Confidence 36789999999999988 56678899999999877 899999999999999999999999999999999999 889
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHH
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWY 158 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~ 158 (389)
++++.+|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.++++.+. +
T Consensus 143 ~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll------~------ 206 (269)
T 4b93_B 143 AKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIEKHVFVVELLL------L------ 206 (269)
T ss_dssp CCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHHH------H------
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHcCCHHHHHHHH------H------
Confidence 99999999999999999999999999999999999 9999999999999999999877662221 1
Q ss_pred HHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 159 ERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 159 ~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
....++.+|++|+||++++.++.
T Consensus 207 -------~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 207 -------HGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp -------TTCCSCCCCTTSCCSGGGSCTTC
T ss_pred -------CCCCCCCcCCCCCCHHHHHHhCC
Confidence 12236789999999999987644
No 3
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=1.3e-25 Score=202.23 Aligned_cols=161 Identities=17% Similarity=0.139 Sum_probs=117.4
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|
T Consensus 54 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 129 (231)
T 3aji_A 54 EIVEFLLQLGVPVNDKD---DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL-EGG 129 (231)
T ss_dssp HHHHHHHHTTCCSCCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHhCCCCCCcC---CCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 57777777777777666 45566677777777765 677777777777777778888887777777777777 667
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHH
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWY 158 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~ 158 (389)
++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+
T Consensus 130 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------- 191 (231)
T 3aji_A 130 ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEEAKFL-------------- 191 (231)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHH--------------
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHHHHHH--------------
Confidence 77777777777888888877777788877777777 777777778888887777665544111
Q ss_pred HHHHhhccchhhhhcccCCCChHHHHHhhhh
Q 016470 159 ERVEEVSMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 159 ~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
.+ .....+.+|.+|+||++++.+.+.
T Consensus 192 ---l~--~ga~~~~~~~~g~t~l~~A~~~~~ 217 (231)
T 3aji_A 192 ---VT--QGASIYIENKEEKTPLQVAKGGLG 217 (231)
T ss_dssp ---HH--TTCCSCCCCTTSCCHHHHSCHHHH
T ss_pred ---HH--CCCCCCCCCCCCCCHHHHHHhhHH
Confidence 11 122356789999999999876543
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.92 E-value=8e-26 Score=207.22 Aligned_cols=182 Identities=13% Similarity=0.129 Sum_probs=118.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++... ...+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..+
T Consensus 37 ~~v~~Ll~~g~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 37 AVISDFIYQGASLHNQT--DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp ---------------CC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHHccCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 67888888888865431 245667788888888776 7888888888888888888888888888888888884444
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCC-------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKME------------- 145 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~------------- 145 (389)
.+++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+.
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 190 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 190 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC----TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 47888888888888888888888888888888887 8888888888888888877766664431
Q ss_pred CchhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhhhh
Q 016470 146 GPALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 146 ~~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
..++.........+.++.+. .....+.+|.+|+||++++.+.+.
T Consensus 191 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 191 ETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 11222222112222222211 223356788899999999877653
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.92 E-value=8.3e-26 Score=209.14 Aligned_cols=119 Identities=15% Similarity=0.174 Sum_probs=56.6
Q ss_pred CCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCC-CCcHHHHHHHcCChhhHHHHHhcCCccccccccccccc
Q 016470 47 ESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE-GRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGG 125 (389)
Q Consensus 47 ~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~-G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G 125 (389)
++.+|..|.||||+|+..|+.+++++|+ ++|++++.++.. |+||||+|+.+|+.+++++|+++|++ ++.+|.+|
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g 225 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLR-DAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD----PTARMYGG 225 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTS
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CcccccCC
Confidence 4445555556666666666666666555 445555555533 56666666666666666666666555 55556666
Q ss_pred ccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhhh
Q 016470 126 NTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 126 ~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
+||||+|+..++.++++.+. ......+.+|.+|.||++.+.....
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll-------------------~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLR-------------------AHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHH-------------------HTTCCCCCCC---------------
T ss_pred CCHHHHHHHcCCcHHHHHHH-------------------HcCCCcCcCCCcccccccccCCccc
Confidence 66666665555544431110 1222356778888888887766543
No 6
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.92 E-value=1.2e-25 Score=194.18 Aligned_cols=138 Identities=24% Similarity=0.275 Sum_probs=123.9
Q ss_pred hhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhh
Q 016470 27 KIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEI 103 (389)
Q Consensus 27 ~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~i 103 (389)
.|+.|+..|+.+ .|+++|+|+|.+|.+|+||||+|+..|+.++++.|+ ..|++++.+|.+|+||||+|+.+|+.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll-~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLI-SKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-hcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 399999999988 899999999999999999999999999999999999 8899999999999999999999999999
Q ss_pred HHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHH
Q 016470 104 FELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEEL 183 (389)
Q Consensus 104 v~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l 183 (389)
+++|+++|++ +|.+|.+|+||||+|+..++.++++.+. + ....++.+|++|+||+++
T Consensus 86 v~~Ll~~gad----vn~~d~~G~TpLh~A~~~g~~~~v~~Ll------~-------------~gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 86 VKLLISKGAD----VNAKDSDGRTPLHHAAENGHKEVVKLLI------S-------------KGADVNTSDSDGRTPLDL 142 (169)
T ss_dssp HHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHHCcCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHH------H-------------cCCCccccCCCCCCHHHH
Confidence 9999999999 9999999999999999999877662221 1 122357889999999999
Q ss_pred HHhhh
Q 016470 184 FATAN 188 (389)
Q Consensus 184 ~~~~~ 188 (389)
+.+.+
T Consensus 143 A~~~g 147 (169)
T 4gpm_A 143 AREHG 147 (169)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 98765
No 7
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.92 E-value=1.6e-25 Score=209.42 Aligned_cols=160 Identities=19% Similarity=0.180 Sum_probs=136.7
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..+ ..+.||||.|+..|+.+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 54 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~g 129 (299)
T 1s70_B 54 EEVLRLLERGADINYAN---VDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI-SQG 129 (299)
T ss_dssp HHHHHHHHHCCCTTCBC---TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCcccC---CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-hCC
Confidence 78999999999999887 56678899999999887 899999999999999999999999999999999999 677
Q ss_pred CcccccC------------------------------------------------------------CCCCcHHHHHHHc
Q 016470 79 QAVEHID------------------------------------------------------------DEGRNILHVAIKY 98 (389)
Q Consensus 79 ~~~~~~d------------------------------------------------------------~~G~t~Lh~A~~~ 98 (389)
++++.+| ..|+||||+|+.+
T Consensus 130 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 130 AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 7776554 3577889999999
Q ss_pred CChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCC
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGF 178 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ +|.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|+
T Consensus 210 g~~~~v~~Ll~~g~d----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll------~-------------~gad~~~~d~~g~ 266 (299)
T 1s70_B 210 GYTEVLKLLIQARYD----VNIKDYDGWTPLHAAAHWGKEEACRILV------E-------------NLCDMEAVNKVGQ 266 (299)
T ss_dssp TCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSC
T ss_pred CcHHHHHHHHHcCCC----CCCcCCCCCcHHHHHHhcCCHHHHHHHH------H-------------cCCCCCCcCCCCC
Confidence 999999999999998 9999999999999999998876662211 1 1223578899999
Q ss_pred ChHHHHHhhh
Q 016470 179 TPEELFATAN 188 (389)
Q Consensus 179 tp~~l~~~~~ 188 (389)
||++++.+..
T Consensus 267 t~l~~A~~~~ 276 (299)
T 1s70_B 267 TAFDVADEDI 276 (299)
T ss_dssp CTTTSCCSGG
T ss_pred CHHHHHHHHH
Confidence 9999997654
No 8
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.91 E-value=7.8e-25 Score=197.84 Aligned_cols=181 Identities=18% Similarity=0.213 Sum_probs=142.0
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|++++..+ ..+.+|||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..+
T Consensus 25 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 25 DICHMLVQAGANIDTCS---EDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHHTTCCTTCCC---TTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCCcCccC---CCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 78999999999988877 55667899999998877 8889999999999999999999999999999999995545
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
.+++..|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+..
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 177 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD----INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHG 177 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTC
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCC
Confidence 88889999999999999999999999999999988 88999999999999998887776654421
Q ss_pred -chhhhhHHhhHHHHHHhh-ccchhhhhcccCCCChHHHHHhhhh
Q 016470 147 -PALVLQEELLWYERVEEV-SMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 147 -~~~~l~~~l~~~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
.++.........+.++.+ ......+.+|++|+||++++...+.
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 178 DSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred CCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 222222222222222222 2334467889999999999887654
No 9
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.91 E-value=1.1e-24 Score=196.32 Aligned_cols=166 Identities=19% Similarity=0.202 Sum_probs=138.0
Q ss_pred HHHHHHHhC-CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCC-----CCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRR-DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGE-----SSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~-ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~-----n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
++++.|+++ |+++|..+ ..+.||||.|+..|+.+ .|+++|+++ +.+|.+|.||||+|+..|+.+++++
T Consensus 17 ~~v~~Ll~~~g~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 93 (232)
T 2rfa_A 17 QALSKLLKFEGCEVHQRG---AMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRA 93 (232)
T ss_dssp HHHHHHHTTTCSCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCCCcccCC---CCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHH
Confidence 689999998 99999887 66778899999999987 889999987 6778899999999999999999999
Q ss_pred HHHHCCCcccccCC-------------CCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCC
Q 016470 73 IFNVYPQAVEHIDD-------------EGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDY 139 (389)
Q Consensus 73 Ll~~~~~~~~~~d~-------------~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~ 139 (389)
|+ ++|++++.++. +|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+
T Consensus 94 Ll-~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 94 LL-ARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD----IRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp HH-HTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHTCSCHH
T ss_pred HH-hCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCChH
Confidence 99 77899888765 799999999999999999999999999 9999999999999999988765
Q ss_pred ccccCCCchhhhhHHhhHHHHHHhhcc----chhhhhcccCCCChHHHHHhhh
Q 016470 140 VPEKMEGPALVLQEELLWYERVEEVSM----PHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 140 ~~~~l~~~~~~l~~~l~~~~~v~~~~~----~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
++..+ .+...+... ....+.+|.+|+||++++.+.+
T Consensus 169 ~~~~i-------------~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 169 FACQM-------------YNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHHHH-------------HHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HHHHH-------------HHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 44100 011111110 1112578999999999998765
No 10
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=9.2e-25 Score=195.54 Aligned_cols=181 Identities=13% Similarity=0.127 Sum_probs=114.4
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|++++... +..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..+
T Consensus 5 ~~i~~Ll~~g~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 82 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQT--DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 82 (223)
T ss_dssp CCEETTEETTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTT
T ss_pred HHHHHHHHcCCCccccc--CCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 56677777777765431 144556677777777765 6677777777777777777777777777777777774444
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+..
T Consensus 83 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 158 (223)
T 2f8y_A 83 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD----VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNRE 158 (223)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC----CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 46777777777777777777777777777777776 77777777777777777666655543311
Q ss_pred -chhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 147 -PALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 147 -~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
.++.........+.++.+. .....+.+|.+|.||++++.+.+
T Consensus 159 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 202 (223)
T 2f8y_A 159 ETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM 202 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhc
Confidence 1111111111111121111 12235677888888888887654
No 11
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.91 E-value=7.8e-25 Score=188.20 Aligned_cols=133 Identities=23% Similarity=0.262 Sum_probs=124.8
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+|++++|+++|+++|..+ ..+.+|||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 27 ~~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~ 102 (169)
T 2y1l_E 27 DDEVRILMANGADVNAED---ASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLL-KN 102 (169)
T ss_dssp HHHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHHCCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 378999999999999887 56678899999999987 899999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 103 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhCCHHHH
Confidence 999999999999999999999999999999999999 999999999999999999887665
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.91 E-value=3.6e-25 Score=198.72 Aligned_cols=163 Identities=18% Similarity=0.141 Sum_probs=108.7
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcC--CCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHH
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKG--IGESSAIDNAETPLFLATKSGCIEIVKEIFNV 76 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~g--a~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~ 76 (389)
|++++|+++|++++........+.+|||.|+..|+.+ .|+++| ++++.+|..|.||||+|+..|+.+++++|+ +
T Consensus 50 ~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~ 128 (228)
T 2dzn_A 50 EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI-E 128 (228)
T ss_dssp HHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-H
T ss_pred HHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHH-H
Confidence 5677777777444443312244556677777776655 666666 666777777777777777777777777777 5
Q ss_pred CCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcC-CcccccccccccccccccccccccCCCCccccCCCchhhhhHHh
Q 016470 77 YPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQME-VPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEEL 155 (389)
Q Consensus 77 ~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~-~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l 155 (389)
+|++++.+|..|+||||+|+.+|+.+++++|+++| ++ ++.+|.+|+||||+|+..++.++++.+ +
T Consensus 129 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~~~~~~v~~L------l---- 194 (228)
T 2dzn_A 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA----VNWQDKQGWTPLFHALAEGHGDAAVLL------V---- 194 (228)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC----SCCCCTTSCCHHHHHHHTTCHHHHHHH------H----
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc----ccCcCCCCCCHHHHHHHcCCHHHHHHH------H----
Confidence 67777777777777777777777777777777776 65 677777777777777776655444111 0
Q ss_pred hHHHHHHhhccchhhhhcccCCCChHHHHHhh
Q 016470 156 LWYERVEEVSMPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 156 ~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~ 187 (389)
+ ..+...+.+|++|+||++++.+.
T Consensus 195 ------~--~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 195 ------E--KYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp ------H--HHCCCSCCBCTTSCBGGGGCSST
T ss_pred ------H--hcCCCCCccCCCCCcHHHHHHHH
Confidence 0 11233678999999999998653
No 13
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=6.7e-25 Score=193.23 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=138.4
Q ss_pred HHHHHHHhCCC-CCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDT-SWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga-~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+.++.|++++. ++|..+ ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 19 ~~v~~ll~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~ 95 (201)
T 3hra_A 19 KKVKEILQDTTYQVDEVD---TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95 (201)
T ss_dssp HHHHHHHTCTTCCTTCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 57788887775 888877 56678899999999887 899999999999999999999999999999999999888
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcC-CcccccccccccccccccccccccCCCCccccCCCchhhhhHHhh
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQME-VPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELL 156 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~-~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~ 156 (389)
+.+++.+|..|+||||+|+.+|+.+++++|+++| ++ ++.+|.+|+||||+|+..++.... ...
T Consensus 96 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~~g~t~L~~A~~~~~~~~~------------~~~ 159 (201)
T 3hra_A 96 TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED----IDFQNDFGYTALIEAVGLREGNQL------------YQD 159 (201)
T ss_dssp CCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC----TTCCCTTSCCHHHHHHHSSCCSHH------------HHH
T ss_pred CcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC----cCCCCCCCCCHHHHHHHhccchhh------------HHH
Confidence 9999999999999999999999999999999998 77 999999999999999987752110 000
Q ss_pred HHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 157 WYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 157 ~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
..+...+ .....+.+|.+|.||++++.+.+
T Consensus 160 ~v~~Ll~--~ga~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 160 IVKLLME--NGADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp HHHHHHH--TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHH--CCCCCCccCCCCCCHHHHHHHcC
Confidence 0011111 12335788999999999998765
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=200.56 Aligned_cols=177 Identities=17% Similarity=0.104 Sum_probs=140.9
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|+++|..+ ..+.||||+|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ ++|
T Consensus 17 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 92 (261)
T 2xai_A 17 LSLRNLISQGWAVNIIT---ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHG 92 (261)
T ss_dssp HHHHHHHHTTCCSSCCC---TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCC
Confidence 78999999999999888 56678899999999877 889999999999999999999999999999999999 778
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
++++. +.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+..
T Consensus 93 ~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~ 167 (261)
T 2xai_A 93 ASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD 167 (261)
T ss_dssp CCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTB
T ss_pred CCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC
Confidence 88775 45699999999999999999999999998 99999999999999999888776644321
Q ss_pred chhhhhHHhhHHHHHHhh-ccchhhhhcccCCCChHHHHHhh
Q 016470 147 PALVLQEELLWYERVEEV-SMPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 147 ~~~~l~~~l~~~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~ 187 (389)
.++.........+.++.+ ......+.+|.+|+||++++.+.
T Consensus 168 t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 168 SPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred ChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 122222111112222211 12344678889999999988754
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=8.1e-25 Score=184.84 Aligned_cols=131 Identities=18% Similarity=0.205 Sum_probs=121.7
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++. + ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 16 ~~v~~Ll~~g~~~~~-~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 90 (153)
T 1awc_B 16 DEVRILMANGAPFTT-D---WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-KHG 90 (153)
T ss_dssp HHHHHHHHHTCCCCC-C---TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-TTT
T ss_pred HHHHHHHHcCCCCCc-C---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-HcC
Confidence 789999999998762 3 45677899999999877 899999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~ 149 (153)
T 1awc_B 91 ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----VHTQSKFCKTAFDISIDNGNEDLA 149 (153)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999 999999999999999999887665
No 16
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.91 E-value=3.9e-24 Score=195.96 Aligned_cols=167 Identities=17% Similarity=0.171 Sum_probs=132.5
Q ss_pred HHHHHHhCCCCCcc----ccccccCCchhhhhhhcC---CCch---hhhhcCCCCCC-----------CcCCCCCHHHHH
Q 016470 3 LARFLIRRDTSWEI----TDSIQDQSKPKIHRYGAN---PNAS---SVDQKGIGESS-----------AIDNAETPLFLA 61 (389)
Q Consensus 3 iv~~Ll~~ga~vn~----~~~~~~~~~~~Lh~a~~~---~~~~---~Ll~~ga~~n~-----------~d~~G~tpLh~A 61 (389)
++++|+++|+++|. .+ ..+.||||+|+.. |+.+ .|+++|++++. +|.+|.||||+|
T Consensus 21 ll~~l~~~g~~i~~~~~~~d---~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A 97 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTEG---STGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIA 97 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSBT---TTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHH
T ss_pred HHHHHHHcCCCcccccccCC---CCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHH
Confidence 67888889999987 56 6677889999988 7766 89999988763 347899999999
Q ss_pred HHcCCHHHHHHHHHHCCCcccccCCC-------------CCcHHHHHHHcCChhhHHHHHh---cCCccccccccccccc
Q 016470 62 TKSGCIEIVKEIFNVYPQAVEHIDDE-------------GRNILHVAIKYRQLEIFELVIQ---MEVPMRRLVRKIDNGG 125 (389)
Q Consensus 62 a~~g~~~~v~~Ll~~~~~~~~~~d~~-------------G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~l~~~~d~~G 125 (389)
+..|+.+++++|+ ++|++++.+|.. |+||||+|+.+|+.+++++|++ +|++ +|.+|.+|
T Consensus 98 ~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~----~n~~d~~g 172 (256)
T 2etb_A 98 IEKRSLQCVKLLV-ENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS----LEATDSLG 172 (256)
T ss_dssp HHTTCHHHHHHHH-HTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCCTTS
T ss_pred HHcCCHHHHHHHH-HcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----cCccCCCC
Confidence 9999999999999 779999999886 9999999999999999999999 8999 99999999
Q ss_pred ccccccccc--cCCCC-------ccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhhh
Q 016470 126 NTLLHMTGI--KRSDY-------VPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 126 ~TpLhlA~~--~~~~~-------~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
+||||+|+. .++.+ +++. .++. ...-.......+.+|.+|+||++++.+.+.
T Consensus 173 ~TpLh~A~~~~~~~~~~~~~~~~iv~~------Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 173 NTVLHALVMIADNSPENSALVIHMYDG------LLQM------GARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp CCHHHHHHHHCCSCHHHHHHHHHHHHH------HHHH------HHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcccCCchhhHHHHHHHHH------HHHc------CCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 999999998 44433 2211 0110 000000001116789999999999987653
No 17
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=3.5e-25 Score=200.52 Aligned_cols=136 Identities=14% Similarity=0.047 Sum_probs=117.3
Q ss_pred HHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCc
Q 016470 4 ARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQA 80 (389)
Q Consensus 4 v~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~ 80 (389)
++.|+++|++++..+..+..+.++||.|+..|+.+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ +.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLI-TAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HCCCC
Confidence 57889999999988877777888899999999987 889999999999999999999999999999999999 78999
Q ss_pred ccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccc-cccccccccc--cccCCCCccccC
Q 016470 81 VEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKID-NGGNTLLHMT--GIKRSDYVPEKM 144 (389)
Q Consensus 81 ~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d-~~G~TpLhlA--~~~~~~~~~~~l 144 (389)
++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+| .+|+||||+| +..++.++++.+
T Consensus 80 ~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~----~~~~~~~~g~tpL~~A~a~~~~~~~~v~~L 142 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASCNDTVICMALVQHGAA----IFATTLSDGATAFEKCDPYREGYADCATYL 142 (229)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCSSTTCCTGGGCCTTSTTHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cccccCCCCCCHHHHHHHHhcChHHHHHHH
Confidence 999999999999999999999999999999999 89887 6999999999 888877777544
No 18
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.91 E-value=2.6e-24 Score=185.13 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=122.8
Q ss_pred HHHHHHHhCCCC-CccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTS-WEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~-vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|+++|.+ ++..+ ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 16 ~~v~~ll~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 91 (172)
T 3v30_A 16 DQLKEHLRKGDNLVNKPD---ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL-ER 91 (172)
T ss_dssp HHHHHHHTTCSGGGGCCC---TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TT
T ss_pred HHHHHHHHcCcccccCCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-Hc
Confidence 689999999877 66666 56778899999999987 899999999999999999999999999999999999 88
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 92 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 92 DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD----LTTEADSGYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHhCcHHHH
Confidence 999999999999999999999999999999999999 999999999999999999887766
No 19
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.91 E-value=1.7e-24 Score=184.16 Aligned_cols=132 Identities=15% Similarity=0.225 Sum_probs=122.2
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..+ ..+.+|||.|+. |+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 19 ~~v~~Ll~~~~~~~~~~---~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 93 (162)
T 1ihb_A 19 EQLTSLLQNNVNVNAQN---GFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLL-EFQ 93 (162)
T ss_dssp HHHHHHTTSCCCTTCCC---TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHhCCCCccccC---ccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 78999999999998887 567788999988 8876 899999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++ .++.+|.+|+||||+|+..++.+++
T Consensus 94 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 94 ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---NVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC---CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC---CCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999986 2589999999999999999887766
No 20
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.91 E-value=1.1e-24 Score=197.10 Aligned_cols=180 Identities=14% Similarity=0.109 Sum_probs=107.9
Q ss_pred HHHHHHHh----CCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHH
Q 016470 2 ELARFLIR----RDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 eiv~~Ll~----~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
|+++.|++ .|.++|..+ ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.++++.|+
T Consensus 23 ~~v~~Ll~~~~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 99 (241)
T 1k1a_A 23 PAVHRLVNLFQQGGRELDIYN---NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL 99 (241)
T ss_dssp HHHHHHHHHHHHTTCCSCCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccc---ccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 45555554 566666665 44555677776666655 666667777666666777777777777777777666
Q ss_pred HHCC---CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccc-cccccccccccccCCCCccccCC-----
Q 016470 75 NVYP---QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKID-NGGNTLLHMTGIKRSDYVPEKME----- 145 (389)
Q Consensus 75 ~~~~---~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d-~~G~TpLhlA~~~~~~~~~~~l~----- 145 (389)
+..+ .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+| .+|+||||+|+..++.++++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 100 DSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD----IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC----cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3322 15666666667777777777777777777766666 66666 56667777776666655553331
Q ss_pred --------CchhhhhHHhhHHHHHHhh-ccchhhhhcccCCCChHHHHHhhh
Q 016470 146 --------GPALVLQEELLWYERVEEV-SMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 --------~~~~~l~~~l~~~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
..++.........+.++.+ ......+.+|.+|+||++++.+.+
T Consensus 176 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 1122221111111222211 123346788999999999987654
No 21
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.91 E-value=3.5e-24 Score=198.68 Aligned_cols=129 Identities=14% Similarity=0.203 Sum_probs=121.0
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
.+++++|+++|++++..+ ..+.+|+|.++..++.+ .|+++|+++|.+|..|+||||+|+..|+.+++++|+ ++
T Consensus 99 ~~~v~~Ll~~~a~~~~~~---~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll-~~ 174 (269)
T 4b93_B 99 ADLIPLLLKHGANAGARN---ADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLL-QH 174 (269)
T ss_dssp TTHHHHHHHTTCCTTCCC---TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHH-HT
T ss_pred HHHHHHHHhcCCCcCccC---CCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HC
Confidence 478999999999999887 56678899999998876 899999999999999999999999999999999999 88
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCC
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRS 137 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~ 137 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+++++
T Consensus 175 gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 175 GASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS----VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCSGGGSCTTCH
T ss_pred CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHhCCc
Confidence 999999999999999999999999999999999999 99999999999999987653
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.90 E-value=2.4e-24 Score=194.57 Aligned_cols=168 Identities=18% Similarity=0.185 Sum_probs=134.6
Q ss_pred CCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCC
Q 016470 13 SWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGR 89 (389)
Q Consensus 13 ~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~ 89 (389)
+++..+ ..+.+|||.|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ ++|++++.+|..|+
T Consensus 3 ~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~ 78 (237)
T 3b7b_A 3 NFKMEH---QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLI-KAGALVDPKDAEGS 78 (237)
T ss_dssp CCCCSS---CCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTTCCCCCCCTTSC
T ss_pred Cccccc---CCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHH-hCCCCCCCCCCCCC
Confidence 445555 56678899999999987 899999999999999999999999999999999999 88999999999999
Q ss_pred cHHHHHHHcCChhhHHHHHhcC-CcccccccccccccccccccccccCCCCccccCCC-------------chhhhhHHh
Q 016470 90 NILHVAIKYRQLEIFELVIQME-VPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG-------------PALVLQEEL 155 (389)
Q Consensus 90 t~Lh~A~~~g~~~iv~~Ll~~~-~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~-------------~~~~l~~~l 155 (389)
||||+|+..|+.+++++|++++ .+ ++.+|..|.||||+|+..++.++++.+.. ..+......
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 154 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMD----VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFS 154 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC----cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHC
Confidence 9999999999999999999998 66 89999999999999999888777654421 122222222
Q ss_pred hHHHHHHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 156 LWYERVEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 156 ~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
...+.++.+. .....+.+|.+|.||++++.+.+
T Consensus 155 ~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 155 GCVDIAEILLAAKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp CCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 2222232221 23345778899999999987654
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.90 E-value=1.1e-24 Score=199.64 Aligned_cols=147 Identities=19% Similarity=0.161 Sum_probs=100.7
Q ss_pred chhhhhcCCCCCC-CcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCC-cc
Q 016470 37 ASSVDQKGIGESS-AIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEV-PM 114 (389)
Q Consensus 37 ~~~Ll~~ga~~n~-~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~-~~ 114 (389)
++.|+++|++++. .|.+|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..|+.+++++|++++. +
T Consensus 39 v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~- 116 (253)
T 1yyh_A 39 ISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL-EASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD- 116 (253)
T ss_dssp -------------CCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC-
T ss_pred HHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-
Confidence 3378888988855 4888999999999999999999999 7788999999999999999999999999999999876 5
Q ss_pred cccccccccccccccccccccCCCCccccCCC-------------chhhhhHHhhHHHHHHhhc-cchhhhhcccCCCCh
Q 016470 115 RRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG-------------PALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTP 180 (389)
Q Consensus 115 ~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~-------------~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp 180 (389)
++.+|.+|+||||+|+..++.++++.+.. ..+.........+.++.+. .....+.+|.+|.||
T Consensus 117 ---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp 193 (253)
T 1yyh_A 117 ---LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 193 (253)
T ss_dssp ---TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred ---ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 88889999999999998888877754421 2222222222222222221 233456788889999
Q ss_pred HHHHHhhh
Q 016470 181 EELFATAN 188 (389)
Q Consensus 181 ~~l~~~~~ 188 (389)
++++...+
T Consensus 194 L~~A~~~~ 201 (253)
T 1yyh_A 194 LFLAAREG 201 (253)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHCC
Confidence 99887654
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.90 E-value=7.9e-25 Score=202.53 Aligned_cols=160 Identities=20% Similarity=0.180 Sum_probs=135.9
Q ss_pred HHHHHHHhCCCC---CccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHH
Q 016470 2 ELARFLIRRDTS---WEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFN 75 (389)
Q Consensus 2 eiv~~Ll~~ga~---vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~ 75 (389)
+++++|+++|++ +|.++ ..+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll- 98 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQN---DLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLL- 98 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHS-
T ss_pred HHHHHHHhcCCCcccccccC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhh-
Confidence 789999999998 55555 66778899999999877 899999999999999999999999999999999999
Q ss_pred HCCC-----------------------------------------------cccccCCCCCcHHHHHHHcCChhhHHHHH
Q 016470 76 VYPQ-----------------------------------------------AVEHIDDEGRNILHVAIKYRQLEIFELVI 108 (389)
Q Consensus 76 ~~~~-----------------------------------------------~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll 108 (389)
..++ +++.+|..|+||||+|+.+|+.+++++|+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 178 (282)
T 1oy3_D 99 QPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLR 178 (282)
T ss_dssp SSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 5443 36778899999999999999999999999
Q ss_pred hcCCccccccccccc-ccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhh
Q 016470 109 QMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 109 ~~~~~~~~l~~~~d~-~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~ 187 (389)
++|++ ++.+|. .|+||||+|+..++.++++.+. + ....++.+|.+|+||++++...
T Consensus 179 ~~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll------~-------------~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 179 DAGAD----LNKPEPTCGRTPLHLAVEAQAASVLELLL------K-------------AGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp HHTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSCCHHHHHHTS
T ss_pred HcCCC----CCCCCCCCCcCHHHHHHHcCCHHHHHHHH------H-------------cCCCCcccccCCCCHHHHHHHc
Confidence 99999 898885 4999999999998876662221 1 1223578899999999999876
Q ss_pred h
Q 016470 188 N 188 (389)
Q Consensus 188 ~ 188 (389)
+
T Consensus 236 ~ 236 (282)
T 1oy3_D 236 P 236 (282)
T ss_dssp S
T ss_pred C
Confidence 4
No 25
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.90 E-value=9.1e-25 Score=195.57 Aligned_cols=132 Identities=16% Similarity=0.224 Sum_probs=74.2
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCC-CCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGI-GESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga-~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
|++++|+++|++++..+ ..+.+|||.|+..|+.+ .|+++|. +++.+|..|.||||+|+..|+.++++.|+ ++
T Consensus 39 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~ 114 (223)
T 2f8y_A 39 DAAKRLLEASADANIQD---NMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI-NS 114 (223)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHH-Hc
Confidence 45555555555555544 33444555555555544 4555544 55555555555555555555555555555 45
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 115 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v 174 (223)
T 2f8y_A 115 HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDMQNNREETPLFLAAREGSYETA 174 (223)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHHTCHHHH
T ss_pred CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCcCHHHHHHHcCCHHHH
Confidence 555555555555555555555555555555555555 555555555555555555554444
No 26
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.90 E-value=6.8e-24 Score=198.14 Aligned_cols=177 Identities=17% Similarity=0.087 Sum_probs=140.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..+ ..+.||||+|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ +++
T Consensus 73 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 148 (285)
T 3d9h_A 73 LSLRNLISQGWAVNIIT---ADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLL-QHG 148 (285)
T ss_dssp HHHHHHHHTTCCSCEEC---TTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCcC---CCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHH-HCC
Confidence 78999999999999888 56778899999999877 889999999999999999999999999999999999 778
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
++++.. .+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+..
T Consensus 149 ~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~ 223 (285)
T 3d9h_A 149 ASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQD 223 (285)
T ss_dssp CCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTB
T ss_pred CCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC
Confidence 887654 4599999999999999999999999998 99999999999999999888777654421
Q ss_pred chhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhh
Q 016470 147 PALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 147 ~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~ 187 (389)
.++.........+.++.+. .....+.+|++|+||++++.+.
T Consensus 224 t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 224 SPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 1222221111122222211 2344678888999999988743
No 27
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=2e-24 Score=189.34 Aligned_cols=133 Identities=20% Similarity=0.115 Sum_probs=122.8
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
.+++++|+++|++++..+ ..+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 48 ~~~v~~Ll~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 123 (192)
T 2rfm_A 48 ENAIDKLVENFDKLEDKD---IEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLL-EH 123 (192)
T ss_dssp GGGHHHHHHHHCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHHhcccccccc---ccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH-HC
Confidence 378999999999988877 55678899999999877 889999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 124 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 124 GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHhCcHHHH
Confidence 999999999999999999999999999999999999 999999999999999999887666
No 28
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=3.1e-25 Score=211.50 Aligned_cols=164 Identities=15% Similarity=0.131 Sum_probs=133.3
Q ss_pred HHHHHHHhCCCCCcc-ccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCC---HHHHHHHH
Q 016470 2 ELARFLIRRDTSWEI-TDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGC---IEIVKEIF 74 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~-~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~---~~~v~~Ll 74 (389)
+++++|+++|+++|. .+ ..+.||||+|+..|+.+ +|+++|+++|.+|.+|+||||+|+..|+ .++++.|+
T Consensus 111 ~~~~~l~~~g~dvn~~~d---~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll 187 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVD---EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALL 187 (327)
T ss_dssp HHHHHCTTSCCCSCSCCS---TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHH
T ss_pred HHHHHHHhcCCCcccccC---CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHH
Confidence 578899999999998 67 66778899999999977 8999999999999999999999999999 68888888
Q ss_pred HHCCCcccccCCCCCcHHHHHHH----cCChhhHHHHHhcCC--------------------ccc---------------
Q 016470 75 NVYPQAVEHIDDEGRNILHVAIK----YRQLEIFELVIQMEV--------------------PMR--------------- 115 (389)
Q Consensus 75 ~~~~~~~~~~d~~G~t~Lh~A~~----~g~~~iv~~Ll~~~~--------------------~~~--------------- 115 (389)
+...++++.+|.+|+||||+|+. .|+.+++++|++.+. +..
T Consensus 188 ~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~ 267 (327)
T 1sw6_A 188 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 267 (327)
T ss_dssp HHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS
T ss_pred HhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH
Confidence 66668899999999999999999 899999999998732 200
Q ss_pred ------ccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhh
Q 016470 116 ------RLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 116 ------~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~ 187 (389)
..+|.+|.+|+||||+|+..++.++++.+. .....++.+|++|+||++++.+.
T Consensus 268 ~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll-------------------~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 268 LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALL-------------------DYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHH-------------------HTTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-------------------HcCCCCcccCCCCCCHHHHHHhc
Confidence 026778888888888888887766552211 11233678999999999988653
No 29
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.90 E-value=2.9e-24 Score=183.86 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=124.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
++++.|+++|+++|..+ ..+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 17 ~~v~~ll~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 92 (167)
T 3v31_A 17 LYLATRIEQENVINHTD---EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL-DCG 92 (167)
T ss_dssp HHHHHHHHHSSCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HHT
T ss_pred HHHHHHHHcCCCcCCCC---CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-HCC
Confidence 78999999999988887 56778899999999887 889999999999999999999999999999999999 778
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
++++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 93 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 151 (167)
T 3v31_A 93 VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNSMDLAVALGYRSVQ 151 (167)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999 999999999999999999887766
No 30
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.90 E-value=3.8e-24 Score=203.85 Aligned_cols=178 Identities=15% Similarity=0.116 Sum_probs=107.0
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..+ ..+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 72 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 147 (351)
T 3utm_A 72 RIVQLLLQHGADVHAKD---KGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLL-SHG 147 (351)
T ss_dssp HHHHHHHHTTCCTTCCC---TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCccC---CCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 57777788777777766 45566678777777766 677777777777777778888887777777777777 445
Q ss_pred CcccccC------------------------------------------------------CCCCcHHHHHHHc---CCh
Q 016470 79 QAVEHID------------------------------------------------------DEGRNILHVAIKY---RQL 101 (389)
Q Consensus 79 ~~~~~~d------------------------------------------------------~~G~t~Lh~A~~~---g~~ 101 (389)
++++..| ..|+||||+|+.. ++.
T Consensus 148 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 227 (351)
T 3utm_A 148 ADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227 (351)
T ss_dssp CCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred CCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence 5444322 3344555555555 224
Q ss_pred hhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC-------------chhhhhHHhhHHHHHHhhc-cc
Q 016470 102 EIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG-------------PALVLQEELLWYERVEEVS-MP 167 (389)
Q Consensus 102 ~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~-------------~~~~l~~~l~~~~~v~~~~-~~ 167 (389)
+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+.. .++.........+.++-+. ..
T Consensus 228 ~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 303 (351)
T 3utm_A 228 QVAELLLRKGAN----VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG 303 (351)
T ss_dssp HHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCC----cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 555555555555 66667777777777776666655543311 1122111111112222111 22
Q ss_pred hhhhhcccCCCChHHHHHhh
Q 016470 168 HFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 168 ~~~~~~n~~g~tp~~l~~~~ 187 (389)
..++.+|.+|+||++++.+.
T Consensus 304 ad~~~~~~~g~tal~~a~~~ 323 (351)
T 3utm_A 304 SDPSIISLQGFTAAQMGNEA 323 (351)
T ss_dssp CCTTCCCTTSCCHHHHSCHH
T ss_pred CCCCCcCCCCCChhhhhhHH
Confidence 33567888888888887443
No 31
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.90 E-value=7.7e-24 Score=209.01 Aligned_cols=180 Identities=17% Similarity=0.131 Sum_probs=91.7
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.+|||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ..+
T Consensus 193 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~ 268 (437)
T 1n11_A 193 DIVKLLLPRGGSPHSPA---WNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLL-SKQ 268 (437)
T ss_dssp HHHHHHGGGTCCSCCCC---TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTT
T ss_pred HHHHHHHhCCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-hcC
Confidence 45555555555554444 23344455555555544 455555555555555555555555555555555555 445
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.++++.+..
T Consensus 269 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g 344 (437)
T 1n11_A 269 ANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM----VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLG 344 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc----CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCC
Confidence 55555555555555555555555555555555555 55555555555555555555444432211
Q ss_pred -chhhhhHHhhHHHHHHhh-ccchhhhhcccCCCChHHHHHhhhh
Q 016470 147 -PALVLQEELLWYERVEEV-SMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 147 -~~~~l~~~l~~~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
.++.........+-++.+ .....++.+|.+|+||++++.+.+.
T Consensus 345 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~ 389 (437)
T 1n11_A 345 YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTC
T ss_pred CCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCc
Confidence 111111111111111111 1223357788999999999877653
No 32
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.90 E-value=3.5e-24 Score=187.78 Aligned_cols=143 Identities=15% Similarity=0.075 Sum_probs=126.0
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+.+
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 111 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLL-SKGSNVNTKDFSGKTPLMWSIIF 111 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHc
Confidence 56778899999999877 889999999999999999999999999999999999 67899999999999999999999
Q ss_pred CChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCC
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGF 178 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|.
T Consensus 112 ~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----------------~--~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 112 GYSEMSYFLLEHGAN----VNDRNLEGETPLIVASKYGRSEIVKKLL-----------------E--LGADISARDLTGL 168 (192)
T ss_dssp TCHHHHHHHHHTTCC----SSCCCTTCCCHHHHHHHHTCHHHHHHHH-----------------H--TTCCTTCBCTTSC
T ss_pred CCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHH-----------------H--CCCCCCCcCCCCC
Confidence 999999999999999 9999999999999999988776652211 1 1223567899999
Q ss_pred ChHHHHHhhh
Q 016470 179 TPEELFATAN 188 (389)
Q Consensus 179 tp~~l~~~~~ 188 (389)
||++++...+
T Consensus 169 t~l~~A~~~~ 178 (192)
T 2rfm_A 169 TAEASARIFG 178 (192)
T ss_dssp BHHHHHHHTT
T ss_pred CHHHHHHHhC
Confidence 9999998765
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.90 E-value=5.9e-24 Score=192.37 Aligned_cols=160 Identities=19% Similarity=0.198 Sum_probs=120.6
Q ss_pred HHHHHHHhCCC----CCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHH
Q 016470 2 ELARFLIRRDT----SWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 eiv~~Ll~~ga----~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
+++++|++.+. ++|..+ ..+.||||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus 22 ~~v~~Ll~~~~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 98 (236)
T 1ikn_D 22 ALTMEVIRQVKGDLAFLNFQN---NLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLT 98 (236)
T ss_dssp SSSSCCCC-----CCCCCCCC---TTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHhhccHHHhhccC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 45566666654 567666 55667799888888876 788888888888888999999999999999999888
Q ss_pred HHCCCc------ccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccc-ccccccccccccCCCCccccCCCc
Q 016470 75 NVYPQA------VEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVPEKMEGP 147 (389)
Q Consensus 75 ~~~~~~------~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~-~G~TpLhlA~~~~~~~~~~~l~~~ 147 (389)
..+.+ ++..|..|+||||+|+.+|+.+++++|+++|++ ++.+|. +|+||||+|+..++.++++.+..
T Consensus 99 -~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~- 172 (236)
T 1ikn_D 99 -QSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD----VNAQEPCNGRTALHLAVDLQNPDLVSLLLK- 172 (236)
T ss_dssp -HSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHT-
T ss_pred -hcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-
Confidence 44433 567788889999999999999999999988888 888887 88999999988887665522211
Q ss_pred hhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 148 ALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 148 ~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
.....+.+|.+|.||++++...+
T Consensus 173 ------------------~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 173 ------------------CGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp ------------------TTCCSCCCCTTCCCGGGGCTTSS
T ss_pred ------------------cCCCCCcccCCCCCHHHHHHccC
Confidence 12225677888888888876653
No 34
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=1.1e-23 Score=178.02 Aligned_cols=130 Identities=14% Similarity=0.166 Sum_probs=119.2
Q ss_pred HHHHHHHhC-CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRR-DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~-ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|+++ +.+++..+ ..+.||||. +..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 16 ~~v~~ll~~~~~~~~~~~---~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 90 (156)
T 1bd8_A 16 QEVRRLLHRELVHPDALN---RFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLV-EH 90 (156)
T ss_dssp HHHHHHHHTTCCCTTCCC---TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHhhCcCccccC---CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-Hc
Confidence 688999988 34777777 567788999 8888877 899999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|.+|+||||+|+.+|+.+++++|+++ ++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~l~~A~~~~~~~~v 149 (156)
T 1bd8_A 91 GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTPLELALQRGAQDLV 149 (156)
T ss_dssp TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCHHHHHHHcCcHHHH
Confidence 999999999999999999999999999999998 88 999999999999999999887766
No 35
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.89 E-value=1.3e-23 Score=182.15 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=120.7
Q ss_pred HHHHHHHhC-CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRR-DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~-ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++ +.+++..+ ..+.+|||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 19 ~~v~~ll~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 94 (179)
T 3f6q_A 19 VAVRLWLDNTENDLNQGD---DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLL-QY 94 (179)
T ss_dssp HHHHHHHHCTTSCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHhcCcccccccC---CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 688999988 57777777 56778899999999877 899999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++.
T Consensus 95 g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 95 KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL----VSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----cchhccCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999886654443
No 36
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.89 E-value=1.6e-23 Score=178.90 Aligned_cols=131 Identities=19% Similarity=0.134 Sum_probs=117.5
Q ss_pred HHHHHHHhC-CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRR-DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~-ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|++. +.+++..+ ..+.||||.|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ ++
T Consensus 22 ~~v~~ll~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 97 (165)
T 3twr_A 22 ETVKKLCTVQSVNCRDIE---GRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLV-KH 97 (165)
T ss_dssp HHHHHHCCTTTTTCCCTT---TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCCccccc---cCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHH-hC
Confidence 688999985 45555444 45667899999999977 899999999999999999999999999999999999 88
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|.. ++.+++
T Consensus 98 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 98 GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCChhHhHhc-CChHHH
Confidence 999999999999999999999999999999999999 99999999999999877 655555
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.89 E-value=1.9e-24 Score=195.62 Aligned_cols=160 Identities=16% Similarity=0.214 Sum_probs=136.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCC------CCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIG------ESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~------~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+++++|+++|++++..+ ..+.+|||+|+..|+.+ .|+++|++ ++..|..|.||||+|+..|+.+++++
T Consensus 59 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 135 (236)
T 1ikn_D 59 EIAEALLGAGCDPELRD---FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVEL 135 (236)
T ss_dssp HHHHCCCSCCCCSCCCC---TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHH
Confidence 78999999999999888 56678899999999877 88899876 46788899999999999999999999
Q ss_pred HHHHCCCcccccCC-CCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhh
Q 016470 73 IFNVYPQAVEHIDD-EGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVL 151 (389)
Q Consensus 73 Ll~~~~~~~~~~d~-~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l 151 (389)
|+ ++|++++.+|. .|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+.
T Consensus 136 Ll-~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll------ 204 (236)
T 1ikn_D 136 LV-SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQLG------ 204 (236)
T ss_dssp HH-HHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHHH------
T ss_pred HH-HcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHHH------
Confidence 99 77899999997 999999999999999999999999999 9999999999999999998877663221
Q ss_pred hHHhhHHHHHHhhccchhhhhcccCCCChHHHHHh
Q 016470 152 QEELLWYERVEEVSMPHFRNHRNNMGFTPEELFAT 186 (389)
Q Consensus 152 ~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~ 186 (389)
+.........+|.+|.||.+...+
T Consensus 205 -----------~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 205 -----------QLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp -----------TTSCGGGSSCCCCCTTTCCCCC--
T ss_pred -----------HcchhhhhcCCccchHHHHhhhcc
Confidence 122222345788899999876543
No 38
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.89 E-value=1.7e-23 Score=179.11 Aligned_cols=141 Identities=15% Similarity=0.133 Sum_probs=124.3
Q ss_pred CchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCC
Q 016470 24 SKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 24 ~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~ 100 (389)
+.+|||.|+..|+.+ .|++.|.+++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+.+|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLL-QNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 456799999999988 788999999999999999999999999999999999 7799999999999999999999999
Q ss_pred hhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCCh
Q 016470 101 LEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTP 180 (389)
Q Consensus 101 ~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp 180 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|.||
T Consensus 82 ~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----------------~--~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 82 TDIVKMLLDCGVD----VNEYDWNGGTPLLYAVHGNHVKCVKMLL-----------------E--SGADPTIETDSGYNS 138 (167)
T ss_dssp HHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH-----------------H--TTCCTTCCCTTSCCH
T ss_pred HHHHHHHHHCCCC----CCcCCCCCCCHHHHHHHcCCHHHHHHHH-----------------H--cCCCCCCcCCCCCCH
Confidence 9999999999999 9999999999999999988766652211 1 122356789999999
Q ss_pred HHHHHhhh
Q 016470 181 EELFATAN 188 (389)
Q Consensus 181 ~~l~~~~~ 188 (389)
++++.+.+
T Consensus 139 l~~A~~~~ 146 (167)
T 3v31_A 139 MDLAVALG 146 (167)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99998764
No 39
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.5e-23 Score=173.63 Aligned_cols=125 Identities=15% Similarity=0.127 Sum_probs=110.7
Q ss_pred CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCC
Q 016470 11 DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE 87 (389)
Q Consensus 11 ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 87 (389)
|+|+ .+| ..+.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|++++.+|..
T Consensus 1 G~d~-~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-FTN---HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLL-QHKALVNTTGYQ 75 (137)
T ss_dssp ---C-CCC---TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCGG
T ss_pred CCCC-CcC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCcccCcCCC
Confidence 5666 344 56678899999999877 889999999999999999999999999999999999 789999999999
Q ss_pred CCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccC
Q 016470 88 GRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 88 G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l 144 (389)
|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..+..++++.+
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 99999999999999999999999999 999999999999999987766555433
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=1.6e-23 Score=201.96 Aligned_cols=178 Identities=19% Similarity=0.124 Sum_probs=101.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC-
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY- 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~- 77 (389)
+++++|+++|+++|..+ ..+.||||+|+..|+.+ +|+++|++++. .+|.||||+|+..|+.+++++|++..
T Consensus 34 ~~v~~Ll~~g~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 34 DEVRRLIETGVSPTIQN---RFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp HHHHHHHHTTCCTTCCC---TTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccccC---CCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 68899999999988877 55667799998888876 78888886644 34555555555555555555555220
Q ss_pred --CCcccc-----------------cCCCCCcHHHHHHHcC--ChhhHHHHHhcCCcccccccccccccccccccccccC
Q 016470 78 --PQAVEH-----------------IDDEGRNILHVAIKYR--QLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 78 --~~~~~~-----------------~d~~G~t~Lh~A~~~g--~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~ 136 (389)
+.+++. +|.+|+||||+|+..| +.+++++|+++|++ ++.+|.+|+||||+|+..+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~----~~~~d~~g~t~L~~A~~~g 184 (364)
T 3ljn_A 109 ERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS----PTAKDKADETPLMRAMEFR 184 (364)
T ss_dssp HHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHTT
T ss_pred ccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcC
Confidence 333333 4455555555555555 55555555555555 5555555555555555554
Q ss_pred CCCccccCCC------------------chhhhhHHhhHHHHHHhh-ccchhhhhcccCCCChHHHHHhhh
Q 016470 137 SDYVPEKMEG------------------PALVLQEELLWYERVEEV-SMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 137 ~~~~~~~l~~------------------~~~~l~~~l~~~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
+.++++.+.. ..+.........+.++.+ .....++.+|.+|.||++++...+
T Consensus 185 ~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 185 NREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp CHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred CHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 4443322210 111111111111122211 123346788999999999998765
No 41
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.89 E-value=3.1e-23 Score=191.52 Aligned_cols=179 Identities=15% Similarity=0.111 Sum_probs=134.3
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|++++..+ ..+.+|||+|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ +.+
T Consensus 53 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 128 (285)
T 1wdy_A 53 DIVELLLRHGADPVLRK---KNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRG 128 (285)
T ss_dssp HHHHHHHHTTCCTTCCC---TTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCcccC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHH-HhC
Confidence 68889999998888777 55667799888888876 788889999888888999999999999999999888 777
Q ss_pred Cccccc----------CCCCCcHHHHHHHcCChhhHHHHHhc-CCcccccccccccccccccccccccCC----CCcccc
Q 016470 79 QAVEHI----------DDEGRNILHVAIKYRQLEIFELVIQM-EVPMRRLVRKIDNGGNTLLHMTGIKRS----DYVPEK 143 (389)
Q Consensus 79 ~~~~~~----------d~~G~t~Lh~A~~~g~~~iv~~Ll~~-~~~~~~l~~~~d~~G~TpLhlA~~~~~----~~~~~~ 143 (389)
++++.. |..|.||||.|+..|+.+++++|+++ |++ ++.+|.+|+||||+|+..++ .++++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~ 204 (285)
T 1wdy_A 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD----VNACDNMGRNALIHALLSSDDSDVEAITHL 204 (285)
T ss_dssp CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC----TTCCCTTSCCHHHHHHHCSCTTTHHHHHHH
T ss_pred CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC----CCccCCCCCCHHHHHHHccccchHHHHHHH
Confidence 777776 77788999999999999999988887 777 88888888888888887776 333322
Q ss_pred C-------------CCchhhhhHHhhHHHHHHhhc--cchhhhhcccCCCChHHHHHhhh
Q 016470 144 M-------------EGPALVLQEELLWYERVEEVS--MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 144 l-------------~~~~~~l~~~l~~~~~v~~~~--~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
+ ...++.........+.++.+. .+...+.+|.+|+||++++.+.+
T Consensus 205 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp HHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 2 112233222222223333222 34446788999999999998765
No 42
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.89 E-value=2.1e-23 Score=187.18 Aligned_cols=161 Identities=20% Similarity=0.225 Sum_probs=136.3
Q ss_pred HHHHHHHhCCCCCcc-ccccccCCchhhhhhhcCCCch---hhhhcC--CCCCC-CcCCCCCHHHHHHHcCCHHHHHHHH
Q 016470 2 ELARFLIRRDTSWEI-TDSIQDQSKPKIHRYGANPNAS---SVDQKG--IGESS-AIDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~-~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~g--a~~n~-~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
++++.|+++|.+++. .+ ..+.||||+|+..|+.+ .|+++| .+++. +|..|.||||+|+..|+.+++++|+
T Consensus 16 ~~v~~Ll~~~~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 92 (228)
T 2dzn_A 16 FKVQELLHSKPSLLLQKD---QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92 (228)
T ss_dssp HHHHHHHHHCGGGTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHhcCccccccCC---CCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999987543 44 56778899999999877 889999 56666 7889999999999999999999999
Q ss_pred HHCC--CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhh
Q 016470 75 NVYP--QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQ 152 (389)
Q Consensus 75 ~~~~--~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~ 152 (389)
+.| .+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+...
T Consensus 93 -~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----- 162 (228)
T 2dzn_A 93 -DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS----VRIKDKFNQIPLHRAASVGSLKLIELLCGL----- 162 (228)
T ss_dssp -SSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHHTT-----
T ss_pred -hCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHHhc-----
Confidence 666 88999999999999999999999999999999999 999999999999999998876665222110
Q ss_pred HHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 153 EELLWYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 153 ~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
.....+.+|.+|.||++++...+
T Consensus 163 -------------g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 163 -------------GKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp -------------TCCCSCCCCTTSCCHHHHHHHTT
T ss_pred -------------CcccccCcCCCCCCHHHHHHHcC
Confidence 11235678999999999988764
No 43
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=6.3e-24 Score=175.95 Aligned_cols=122 Identities=9% Similarity=0.092 Sum_probs=113.0
Q ss_pred CCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCC
Q 016470 11 DTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDE 87 (389)
Q Consensus 11 ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~ 87 (389)
++++|..+ ..+.+|||.|+..|+.+ .|+++|++++.+|..|+||||+|+. |+.+++++|+ ++|++++.+|..
T Consensus 2 ~~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHMLG---GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLL-LHGAEPNCADPA 76 (136)
T ss_dssp CCCCSCCC---CCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHH-HHTCCSSCCBTT
T ss_pred CCCccCCC---CCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHH-HCCCCCCCcCCC
Confidence 46777777 56778899999999987 8899999999999999999999999 9999999999 778999999999
Q ss_pred -CCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 88 -GRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 88 -G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~ 127 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGAR----LDVCDAWGRLPVDLAEEQGHRDIA 127 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCC----CCCCSSSSSCHHHHHHHHTCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHH
Confidence 99999999999999999999999999 999999999999999998876665
No 44
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.88 E-value=5.2e-23 Score=189.39 Aligned_cols=158 Identities=15% Similarity=0.192 Sum_probs=88.6
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
|++++|+++|++++..+ .+.+|||.|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ +.|
T Consensus 83 ~~v~~Ll~~g~~~~~~~----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 157 (261)
T 2xai_A 83 DCVNLLLQHGASVQPES----DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLL-ESG 157 (261)
T ss_dssp HHHHHHHHTTCCSSCSC----TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHH-HHT
T ss_pred HHHHHHHHCCCCCCCCC----CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHH-HcC
Confidence 44555555555544322 2334455555555544 555666666666666666666666666666666666 445
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHH
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWY 158 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~ 158 (389)
++++. |..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++ +.+.+
T Consensus 158 ~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpl~~A~~~~~--~~~~l-------------- 216 (261)
T 2xai_A 158 ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGAD----TQAKNAEGKRPVELVPPESP--LAQLF-------------- 216 (261)
T ss_dssp CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCTTCT--HHHHH--------------
T ss_pred CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCChhhhcccccc--HHHHH--------------
Confidence 55553 55666666666666666666666666666 66666666666666664321 21100
Q ss_pred HHHHhhccc-----hhhhhcccCCCChHHHHHhh
Q 016470 159 ERVEEVSMP-----HFRNHRNNMGFTPEELFATA 187 (389)
Q Consensus 159 ~~v~~~~~~-----~~~~~~n~~g~tp~~l~~~~ 187 (389)
.+...++ ...+.+|..|+||++.+.+.
T Consensus 217 --l~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 217 --LEREGPPSLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp --HHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred --HhccCCccHHHHHHHHHHHHhchhccccCccc
Confidence 0001111 12467899999999988764
No 45
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.88 E-value=3.3e-23 Score=187.29 Aligned_cols=166 Identities=14% Similarity=0.079 Sum_probs=130.2
Q ss_pred cCCchhhhhhhcCCCch---hhhh----cCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHH
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQ----KGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHV 94 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~----~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~ 94 (389)
+.+.||||.|+..|+.+ .|++ .|++++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~l~~ 85 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV-TAGASPMALDRHGQTAAHL 85 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCCHHHH
Confidence 56678899999999987 4554 89999999999999999999999999999999 7899999999999999999
Q ss_pred HHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCC--------------CchhhhhHHhhHHHH
Q 016470 95 AIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKME--------------GPALVLQEELLWYER 160 (389)
Q Consensus 95 A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~--------------~~~~~l~~~l~~~~~ 160 (389)
|+..|+.+++++|++++......++.+|.+|+||||+|+..++.++++.+. ...+.........+.
T Consensus 86 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 86 ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165 (241)
T ss_dssp HHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHH
Confidence 999999999999999987322238899999999999999988877664431 112222222222222
Q ss_pred HHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 161 VEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 161 v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
++.+. .....+.+|.+|.||++++...+
T Consensus 166 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 166 VQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 22221 23346778999999999987654
No 46
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.88 E-value=4e-23 Score=192.96 Aligned_cols=174 Identities=16% Similarity=0.096 Sum_probs=102.4
Q ss_pred HHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCC
Q 016470 3 LARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQ 79 (389)
Q Consensus 3 iv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~ 79 (389)
+.++|.++ ++|.+| ..+.||||+|+..|+.+ .|+++|++++.+| |+||||+|+..|+.+++++|+ ++|+
T Consensus 15 v~~lL~~~--~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll-~~ga 86 (285)
T 3kea_A 15 LKSFLSSK--DTFKAD---VHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILL-FSGL 86 (285)
T ss_dssp HHHHHHST--TTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHH-HTTC
T ss_pred HHHHHHhC--CCCccC---CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHH-HCCC
Confidence 44555444 344554 44555677666666655 6666666666653 667777777777777777666 5566
Q ss_pred cccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccccc-ccccccccccCCCCccccCCCc-----------
Q 016470 80 AVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGG-NTLLHMTGIKRSDYVPEKMEGP----------- 147 (389)
Q Consensus 80 ~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G-~TpLhlA~~~~~~~~~~~l~~~----------- 147 (389)
+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+| +||||+|+..++.++++.+...
T Consensus 87 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~ 162 (285)
T 3kea_A 87 DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR----LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILL 162 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG----GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHH
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCc
Confidence 6666666677777777777777777777766666 66666666 5777777666665555333111
Q ss_pred -hhhhhHHhhHHHHHHhhc-cchhhhhcccCCCCh-HHHHHhhh
Q 016470 148 -ALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTP-EELFATAN 188 (389)
Q Consensus 148 -~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp-~~l~~~~~ 188 (389)
++.........+.++.+. .....+.+|.+|.|| ++++.+.+
T Consensus 163 t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 163 SCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcC
Confidence 111111111111111111 223367889999998 99887654
No 47
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=2e-23 Score=189.81 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=106.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
++++.|+++|++++.. ..+.++||.|+..|+.+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ ++|
T Consensus 19 ~~~~~ll~~g~~~~~~----~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g 93 (239)
T 1ycs_B 19 KTGSERIAHGMRVKFN----PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLV-QFG 93 (239)
T ss_dssp ----------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HHT
T ss_pred HHHHHHhccCCCcccC----chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 6789999999998854 35678899999999987 889999999999999999999999999999999999 679
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccc-cccccc--cccCCCCcccc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGN-TLLHMT--GIKRSDYVPEK 143 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~-TpLhlA--~~~~~~~~~~~ 143 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|. ||||+| +..++.++++.
T Consensus 94 a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 94 VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA----VFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 99999999999999999999999999999999999 999998887 999999 67777777733
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.88 E-value=1.1e-22 Score=186.64 Aligned_cols=176 Identities=15% Similarity=0.106 Sum_probs=130.1
Q ss_pred HHHHHHhCCCCCcccccc-ccCCchhhhhhh---cCCCch---hhhhcCCC-----------CCCCcCCCCCHHHHHHHc
Q 016470 3 LARFLIRRDTSWEITDSI-QDQSKPKIHRYG---ANPNAS---SVDQKGIG-----------ESSAIDNAETPLFLATKS 64 (389)
Q Consensus 3 iv~~Ll~~ga~vn~~~~~-~~~~~~~Lh~a~---~~~~~~---~Ll~~ga~-----------~n~~d~~G~tpLh~Aa~~ 64 (389)
++++|+++|++++..+.. +..+.||||+|+ ..|+.+ .|+++|++ .+.+|.+|+||||+|+..
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHT
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHc
Confidence 456666799998876621 244678899888 667766 88888754 455566899999999999
Q ss_pred CCHHHHHHHHHHCCCcccccC--------------CCCCcHHHHHHHcCChhhHHHHHh---cCCccccccccccccccc
Q 016470 65 GCIEIVKEIFNVYPQAVEHID--------------DEGRNILHVAIKYRQLEIFELVIQ---MEVPMRRLVRKIDNGGNT 127 (389)
Q Consensus 65 g~~~~v~~Ll~~~~~~~~~~d--------------~~G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~l~~~~d~~G~T 127 (389)
|+.+++++|+ ++|++++.+| ..|+||||+|+.+|+.+++++|++ +|++ ++.+|.+|+|
T Consensus 104 g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~----~~~~d~~g~T 178 (260)
T 3jxi_A 104 RCKHYVELLV-EKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD----LRRQDSRGNT 178 (260)
T ss_dssp TCHHHHHHHH-HTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCCTTSCC
T ss_pred CCHHHHHHHH-hCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----CcccCCCCCc
Confidence 9999999999 7899999998 689999999999999999999999 8998 9999999999
Q ss_pred ccccccccCCCCccccCCCchhhhh-HHhhH--HHHHHhhccchhhhhcccCCCChHHHHHhhhh
Q 016470 128 LLHMTGIKRSDYVPEKMEGPALVLQ-EELLW--YERVEEVSMPHFRNHRNNMGFTPEELFATANN 189 (389)
Q Consensus 128 pLhlA~~~~~~~~~~~l~~~~~~l~-~~l~~--~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~~ 189 (389)
|||+|+..++.... ..... .-..+ .....-.......+.+|.+|.||++++.+.+.
T Consensus 179 pLh~A~~~~~~~~~------~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 179 VLHALVAIADNTRE------NTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp HHHHHHHHCCSSHH------HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHhccCchh------HHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 99999986653211 00000 00000 00011000111226789999999999987653
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.88 E-value=4.7e-23 Score=181.35 Aligned_cols=133 Identities=20% Similarity=0.216 Sum_probs=122.5
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhh-hcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVD-QKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll-~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|++++..+ ..+.+|||.|+..|+.+ .|+ +.+++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 53 ~~v~~Ll~~g~~~~~~~---~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 53 EIAKALIDRGADINLQN---SISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 78999999999999887 56678899999999987 666 667899999999999999999999999999999666
Q ss_pred CCcccccCCCCCcHHHHHHHcCC-----hhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQ-----LEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~-----~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+++++.+|..|+||||+|+..++ .+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 130 ~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~ 194 (201)
T 3hra_A 130 REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD----QSIKDNSGRTAMDYANQKGYTEIS 194 (201)
T ss_dssp CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC----CCccCCCCCCHHHHHHHcCCHhHH
Confidence 59999999999999999999998 8999999999999 999999999999999999887766
No 50
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.88 E-value=2.6e-23 Score=187.10 Aligned_cols=132 Identities=14% Similarity=0.189 Sum_probs=122.9
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.+|||.|+..++.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ .+|
T Consensus 87 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g 162 (231)
T 3aji_A 87 EIVKALLVKGAHVNAVN---QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL-FYK 162 (231)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH-hcC
Confidence 78999999999999887 56678899999999877 889999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++.
T Consensus 163 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 163 ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS----IYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999 999999999999999887665544
No 51
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=3.7e-23 Score=177.70 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=125.1
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.+++|+|+..|+.+ .|+++|+++|.+|.+|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+.+
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLL-KNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHc
Confidence 34556799999999987 899999999999999999999999999999999999 78999999999999999999999
Q ss_pred CChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCC
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGF 178 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~ 178 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|.
T Consensus 91 ~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~-------------~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 91 GHLEIVEVLLKNGAD----VNANDMEGHTPLHLAAMFGHLEIVEVLL------K-------------NGADVNAQDKFGK 147 (169)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHH------H-------------cCCCCCCcCCCCC
Confidence 999999999999999 9999999999999999998766652211 1 1222567899999
Q ss_pred ChHHHHHhhh
Q 016470 179 TPEELFATAN 188 (389)
Q Consensus 179 tp~~l~~~~~ 188 (389)
||++++.+.+
T Consensus 148 t~l~~A~~~~ 157 (169)
T 2y1l_E 148 TAFDISIDNG 157 (169)
T ss_dssp CHHHHHHHTT
T ss_pred CHHHHHHHhC
Confidence 9999998765
No 52
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.88 E-value=1.1e-22 Score=193.84 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=134.5
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCC------------------------------
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGE------------------------------ 47 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~------------------------------ 47 (389)
+|+|++||++|+++|.++ .+.|.||||+|+..|+.+ +|+++|+++
T Consensus 38 ~~~V~~LL~~Gadvn~~~--~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (337)
T 4g8k_A 38 VDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKG 115 (337)
T ss_dssp HHHHHHHHHHTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHHHHHCCCCCCccC--CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhcc
Confidence 479999999999999876 244778899999999877 788887765
Q ss_pred ---CCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCccccc----------CCCCCcHHHHHHHcCChhhHHHHHh-cCCc
Q 016470 48 ---SSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHI----------DDEGRNILHVAIKYRQLEIFELVIQ-MEVP 113 (389)
Q Consensus 48 ---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~----------d~~G~t~Lh~A~~~g~~~iv~~Ll~-~~~~ 113 (389)
+.+|.+|.||+|+|+..|+.++++.++ .+|++++.+ +..|+||||+|+++|+.+++++|++ .|++
T Consensus 116 ~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll-~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad 194 (337)
T 4g8k_A 116 ADVNECDFYGFTAFMEAAVYGKVKALKFLY-KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194 (337)
T ss_dssp CCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC
T ss_pred chhhhhccCCCCHHHHHHHcCcHHHHHHHH-HcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC
Confidence 456778999999999999999999999 777776543 4568999999999999999999996 5888
Q ss_pred ccccccccccccccccccccccCCCC----ccccC-------------CCchhhhhHHhhHHHHHHhhc--cchhhhhcc
Q 016470 114 MRRLVRKIDNGGNTLLHMTGIKRSDY----VPEKM-------------EGPALVLQEELLWYERVEEVS--MPHFRNHRN 174 (389)
Q Consensus 114 ~~~l~~~~d~~G~TpLhlA~~~~~~~----~~~~l-------------~~~~~~l~~~l~~~~~v~~~~--~~~~~~~~n 174 (389)
+|.+|..|+||+|.++..+... +.+.+ ....+.........+.++.+. .....+.+|
T Consensus 195 ----~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d 270 (337)
T 4g8k_A 195 ----VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTD 270 (337)
T ss_dssp ----TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBC
T ss_pred ----cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcC
Confidence 8999999999998877544432 22221 111222222222333344332 234567889
Q ss_pred cCCCChHHHHHhhh
Q 016470 175 NMGFTPEELFATAN 188 (389)
Q Consensus 175 ~~g~tp~~l~~~~~ 188 (389)
.+|+||++++.+.+
T Consensus 271 ~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 271 SDGKTALLLAVELK 284 (337)
T ss_dssp TTSCBHHHHHHHTT
T ss_pred CCCCCHHHHHHHcC
Confidence 99999999987764
No 53
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=8.2e-24 Score=196.81 Aligned_cols=161 Identities=16% Similarity=0.161 Sum_probs=135.5
Q ss_pred HHHHHHHhCCCC--CccccccccCCchhhhhhhcCCCch---hhhhcCC-CCCCCcCCCCCHHHHHH-----HcCCHHHH
Q 016470 2 ELARFLIRRDTS--WEITDSIQDQSKPKIHRYGANPNAS---SVDQKGI-GESSAIDNAETPLFLAT-----KSGCIEIV 70 (389)
Q Consensus 2 eiv~~Ll~~ga~--vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga-~~n~~d~~G~tpLh~Aa-----~~g~~~~v 70 (389)
+.++.+++.+.+ +|..| ..|.||||+|+..|+.+ .|+++|+ +++.+|..|.||||+|+ ..|+.+++
T Consensus 90 ~~~~~l~~~~~~~~~n~~d---~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v 166 (276)
T 4hbd_A 90 VTFRAMSARLLDYVVNIAD---SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETV 166 (276)
T ss_dssp HHHHHHCHHHHHHHHTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHhhcCcCCC---CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHH
Confidence 345666666555 56666 56778899999999987 8999998 99999999999999999 67899999
Q ss_pred HHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhh
Q 016470 71 KEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALV 150 (389)
Q Consensus 71 ~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~ 150 (389)
+.|+ ..|++.+..|..|+||||+|+.+|+.+++++|+++|++ +|.+|.+|+||||+|+..++.++++.+..
T Consensus 167 ~~Ll-~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad----~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~---- 237 (276)
T 4hbd_A 167 LQLF-RLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD----VNVQDDDGSTALMCACEHGHKEIAGLLLA---- 237 (276)
T ss_dssp HHHH-HHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHT----
T ss_pred HHHH-HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHHHh----
Confidence 9999 67788888999999999999999999999999999999 99999999999999999988766622211
Q ss_pred hhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 151 LQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 151 l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
......+.+|.+|.||++++.+.+
T Consensus 238 --------------~~gad~~~~d~~g~TpL~~A~~~g 261 (276)
T 4hbd_A 238 --------------VPSCDISLTDRDGSTALMVALDAG 261 (276)
T ss_dssp --------------STTCCTTCCCTTSCCHHHHHHHHT
T ss_pred --------------cCCCCCcCcCCCCCCHHHHHHHcC
Confidence 022335788999999999998765
No 54
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=1.8e-23 Score=191.58 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=121.1
Q ss_pred CHHHHHHHhCCCCCcccc--------ccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCC-------------CCC
Q 016470 1 MELARFLIRRDTSWEITD--------SIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDN-------------AET 56 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~--------~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~-------------G~t 56 (389)
.|++++|+++|++++..+ .....+.||||+|+..|+.+ .|+++|++++.+|.. |.|
T Consensus 59 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~t 138 (256)
T 2etb_A 59 NACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGEL 138 (256)
T ss_dssp CTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSS
T ss_pred HHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCC
Confidence 478999999998876332 01135678899999999987 899999999999886 999
Q ss_pred HHHHHHHcCCHHHHHHHHHH--CCCcccccCCCCCcHHHHHHH--cCChh-------hHHHHHhcCCcccccc-------
Q 016470 57 PLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIK--YRQLE-------IFELVIQMEVPMRRLV------- 118 (389)
Q Consensus 57 pLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~--~g~~~-------iv~~Ll~~~~~~~~l~------- 118 (389)
|||+|+..|+.+++++|++. +|++++.+|.+|+||||+|+. +++.+ ++++|+++|++ +
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~----~~~~~~~~ 214 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR----LCPTVQLE 214 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HSTTCCGG
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC----cccccccc
Confidence 99999999999999999943 899999999999999999999 78888 99999999998 7
Q ss_pred cccccccccccccccccCCCCcc
Q 016470 119 RKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 119 ~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+.+|.+|+||||+|+..++.+++
T Consensus 215 ~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 215 EISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cccCCCCCCHHHHHHHhCCHHHH
Confidence 89999999999999999988777
No 55
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.87 E-value=1e-22 Score=187.95 Aligned_cols=181 Identities=17% Similarity=0.139 Sum_probs=144.2
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+|++++|+++|++++..+ ...+.+|||.|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ ++
T Consensus 18 ~~~v~~Ll~~g~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 94 (285)
T 1wdy_A 18 VDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFL-SK 94 (285)
T ss_dssp HHHHHHHHHTTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHHcCCCccccc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 378999999999988773 256678899999999877 899999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccc----------ccccccccccccccCCCCccccCCC-
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKI----------DNGGNTLLHMTGIKRSDYVPEKMEG- 146 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~----------d~~G~TpLhlA~~~~~~~~~~~l~~- 146 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+ |.+|.||||+|+..++.++++.+..
T Consensus 95 g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 170 (285)
T 1wdy_A 95 GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN----VNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE 170 (285)
T ss_dssp TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC----TTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC----cccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 999999999999999999999999999999999988 6666 8899999999999888777654421
Q ss_pred -------------chhhhhHHhhH----HHHHHhh-ccchhhhhcccCCCChHHHHHhhh
Q 016470 147 -------------PALVLQEELLW----YERVEEV-SMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 147 -------------~~~~l~~~l~~----~~~v~~~-~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
..+........ .+.++.+ ......+.+|.+|.||++++.+.+
T Consensus 171 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 230 (285)
T 1wdy_A 171 MGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 230 (285)
T ss_dssp SCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred cCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 11111100000 1111111 123345678899999999988764
No 56
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.87 E-value=7.1e-22 Score=177.87 Aligned_cols=179 Identities=19% Similarity=0.152 Sum_probs=141.5
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcC-CCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAID-NAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~-~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|++++..+ ..+.+|||.|+..|+.+ .|+++|++++..+. .|.||||+|+..|+.++++.|+ ++
T Consensus 23 ~~~~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll-~~ 98 (240)
T 3eu9_A 23 ERCRELVEAGYDVRQPD---KENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLM-KY 98 (240)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCcCCCC---CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHH-Hc
Confidence 78999999999998887 56778899999999877 89999999986654 4999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCC-CCccccCC-----------
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRS-DYVPEKME----------- 145 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~-~~~~~~l~----------- 145 (389)
|++++.+|..|+||||.|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++ ..+.+.+.
T Consensus 99 g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~ 174 (240)
T 3eu9_A 99 GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD----VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK 174 (240)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCT
T ss_pred CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC----ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhc
Confidence 999999999999999999999999999999999998 99999999999999996665 44443221
Q ss_pred ---CchhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 146 ---GPALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 ---~~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
...+.........+.++.+. .....+.+|.+|+||++++.+.+
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 175 YHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 12222222222222222211 22345678889999999987765
No 57
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.87 E-value=3.7e-23 Score=200.57 Aligned_cols=178 Identities=13% Similarity=0.087 Sum_probs=131.9
Q ss_pred HHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC-
Q 016470 3 LARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP- 78 (389)
Q Consensus 3 iv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~- 78 (389)
.++.|+++|+++|..| ..+.||||+|+..|+.+ +|+++|++++.+|..|.||||+|+..|+.+++++|+ ..+
T Consensus 148 ~~~~ll~~ga~vn~~d---~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~~~ 223 (373)
T 2fo1_E 148 EAKECIAAGADVNAMD---CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML-NSTK 223 (373)
T ss_dssp HHHHHHHTCCCTTCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHT-TSHH
T ss_pred HHHHHHhcCCCCcCCC---CCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH-hcCc
Confidence 4567888888888877 55667789888888876 788888988888888899999999999988888888 555
Q ss_pred --CcccccCCCCCcHHHHHHHcC---ChhhHHHHHhcCCcccccccc--------cccccccccccccccCCCCccccCC
Q 016470 79 --QAVEHIDDEGRNILHVAIKYR---QLEIFELVIQMEVPMRRLVRK--------IDNGGNTLLHMTGIKRSDYVPEKME 145 (389)
Q Consensus 79 --~~~~~~d~~G~t~Lh~A~~~g---~~~iv~~Ll~~~~~~~~l~~~--------~d~~G~TpLhlA~~~~~~~~~~~l~ 145 (389)
.+++..|.+|+||||+|+..+ +.+++++|+++|++ ++. +|.+|+||||+|+..++.++++.+.
T Consensus 224 ~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 224 LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK----VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC----SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC----cccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 678888888888888888887 78888888888877 443 6778888888888888777664442
Q ss_pred C--------------chhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 146 G--------------PALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 ~--------------~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
. .++.........+.++.+. .....+.+|.+|+||++++.+.+
T Consensus 300 ~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 300 GEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp HHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred HhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence 1 2222222222222222221 23446788999999999998765
No 58
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.87 E-value=2.8e-23 Score=188.00 Aligned_cols=137 Identities=13% Similarity=0.077 Sum_probs=122.0
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..| ..+.||||+|+..|+.+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ ++|
T Consensus 35 ~~v~~Ll~~g~~~~~~d---~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll-~~g 110 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQPN---EEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV-QHG 110 (229)
T ss_dssp HHHHHHHHHSSCTTCCC---TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-TTT
T ss_pred HHHHHHHhcCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 78999999999999887 56778899999999877 899999999999999999999999999999999999 889
Q ss_pred CcccccC-CCCCcHHHHH--HHcCChhhHHHHHhcCCccc----------------------------cccccccccccc
Q 016470 79 QAVEHID-DEGRNILHVA--IKYRQLEIFELVIQMEVPMR----------------------------RLVRKIDNGGNT 127 (389)
Q Consensus 79 ~~~~~~d-~~G~t~Lh~A--~~~g~~~iv~~Ll~~~~~~~----------------------------~l~~~~d~~G~T 127 (389)
++++.+| .+|+||||+| +..|+.+++++|+++|++.. ..++.+|.+|+|
T Consensus 111 a~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~T 190 (229)
T 2vge_A 111 AAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEET 190 (229)
T ss_dssp CCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCS
T ss_pred CCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCccc
Confidence 9999987 6999999999 99999999999999876520 115677888999
Q ss_pred ccccccccCCCCccc
Q 016470 128 LLHMTGIKRSDYVPE 142 (389)
Q Consensus 128 pLhlA~~~~~~~~~~ 142 (389)
|||+|+..|+.++++
T Consensus 191 pL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 191 DWWWAALHGQEGYVP 205 (229)
T ss_dssp SEEEEEETTEEEEEE
T ss_pred HHHHHHHcCCcceee
Confidence 999999998888773
No 59
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.87 E-value=4.4e-23 Score=176.17 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=123.3
Q ss_pred cCCchhhhhhhcCCCch---hhhh-cCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHH
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQ-KGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIK 97 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~-~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 97 (389)
..+.++||.|+..|+.+ .|++ .+.+++..|..|.||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+.
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL-QHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHH-hcCCCCCccCCCCCCHHHHHHH
Confidence 44567899999999988 5555 56788889999999999999999999999999 7899999999999999999999
Q ss_pred cCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCC
Q 016470 98 YRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMG 177 (389)
Q Consensus 98 ~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g 177 (389)
+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|
T Consensus 85 ~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~-------------~ga~~~~~~~~g 141 (165)
T 3twr_A 85 YGHYEVAELLVKHGAV----VNVADLWKFTPLHEAAAKGKYEICKLLL------Q-------------HGADPTKKNRDG 141 (165)
T ss_dssp TTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTS
T ss_pred cCcHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHH------H-------------cCCCCcccCCCC
Confidence 9999999999999999 9999999999999999998776652211 1 122357889999
Q ss_pred CChHHHHHhhhh
Q 016470 178 FTPEELFATANN 189 (389)
Q Consensus 178 ~tp~~l~~~~~~ 189 (389)
+||++++.+.+.
T Consensus 142 ~t~l~~a~~~~~ 153 (165)
T 3twr_A 142 NTPLDLVKDGDT 153 (165)
T ss_dssp CCTGGGSCTTCH
T ss_pred CChhHhHhcCCh
Confidence 999999876544
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.87 E-value=6.9e-23 Score=176.14 Aligned_cols=140 Identities=20% Similarity=0.188 Sum_probs=121.8
Q ss_pred chhhhhhhcCCCch---hhhhcCCC-CCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCC
Q 016470 25 KPKIHRYGANPNAS---SVDQKGIG-ESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 25 ~~~Lh~a~~~~~~~---~Ll~~ga~-~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~ 100 (389)
.+|||.|+..|+.+ .|+++|.+ ++.+|..|.||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+.+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLL-EWGADPHILAKERESALSLASTGGY 81 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHH-HHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCchhhcccCCCHHHHHHHCCC
Confidence 45699999999987 77888876 8999999999999999999999999999 7789999999999999999999999
Q ss_pred hhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCCh
Q 016470 101 LEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTP 180 (389)
Q Consensus 101 ~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp 180 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|.||
T Consensus 82 ~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~-------------~ga~~~~~~~~g~t~ 138 (172)
T 3v30_A 82 TDIVGLLLERDVD----INIYDWNGGTPLLYAVRGNHVKCVEALL------A-------------RGADLTTEADSGYTP 138 (172)
T ss_dssp HHHHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSCCH
T ss_pred HHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHH------H-------------cCCCccccCCCCCCH
Confidence 9999999999999 9999999999999999998776652211 1 122356789999999
Q ss_pred HHHHHhhh
Q 016470 181 EELFATAN 188 (389)
Q Consensus 181 ~~l~~~~~ 188 (389)
++++...+
T Consensus 139 l~~A~~~~ 146 (172)
T 3v30_A 139 MDLAVALG 146 (172)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99998765
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.87 E-value=1.1e-22 Score=172.96 Aligned_cols=142 Identities=20% Similarity=0.194 Sum_probs=122.9
Q ss_pred CCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcC
Q 016470 23 QSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g 99 (389)
...++||.|+..|+.+ .|+++|++++.+|..|+||||+|+. |+.+++++|+ +.|++++.+|..|+||||+|+.+|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLL-LRGANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3457799999999987 7899999999999999999999999 9999999999 789999999999999999999999
Q ss_pred ChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCC
Q 016470 100 QLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFT 179 (389)
Q Consensus 100 ~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~t 179 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. +. .....+.+|.+|.|
T Consensus 82 ~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-----------------~~-g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 82 FLDTLQTLLEFQAD----VNIEDNEGNLPLHLAAKEGHLRVVEFLV-----------------KH-TASNVGHRNHKGDT 139 (162)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH-----------------HH-SCCCTTCCCTTSCC
T ss_pred CHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHH-----------------Hc-cCCCCCCcCCCCCc
Confidence 99999999999999 9999999999999999988776652211 10 11113678899999
Q ss_pred hHHHHHhhh
Q 016470 180 PEELFATAN 188 (389)
Q Consensus 180 p~~l~~~~~ 188 (389)
|++++.+.+
T Consensus 140 ~l~~A~~~~ 148 (162)
T 1ihb_A 140 ACDLARLYG 148 (162)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999998765
No 62
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.87 E-value=8.2e-23 Score=190.02 Aligned_cols=132 Identities=18% Similarity=0.212 Sum_probs=120.9
Q ss_pred HHHHHHHhCCC-CCccccccccCCchhhhhhhcC-----CCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRRDT-SWEITDSIQDQSKPKIHRYGAN-----PNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~ga-~vn~~~~~~~~~~~~Lh~a~~~-----~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+++++|+++|+ ++|..+ ..+.+|||.|+.. ++.+ .|++.|.+.+..|..|.||||+|+..|+.+++++
T Consensus 125 ~~v~~Ll~~g~~~~~~~~---~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~ 201 (276)
T 4hbd_A 125 PVVQQLLDSGVCKVDKQN---RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKA 201 (276)
T ss_dssp HHHHHHHHTSCCCTTCCC---TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCCcCCCCC---CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 78999999998 888887 6677889998843 4433 8899999999999999999999999999999999
Q ss_pred HHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHh-cCCcccccccccccccccccccccccCCCCcc
Q 016470 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQ-MEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~-~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|+ ++|++++.+|.+|+||||+|+.+|+.+++++|++ .|++ ++.+|.+|+||||+|+..++.+++
T Consensus 202 Ll-~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad----~~~~d~~g~TpL~~A~~~g~~~iv 266 (276)
T 4hbd_A 202 LL-ACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD----ISLTDRDGSTALMVALDAGQSEIA 266 (276)
T ss_dssp HH-HTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC----CcCcCCCCCCHHHHHHHcCCHHHH
Confidence 99 8899999999999999999999999999999999 8998 999999999999999999987776
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.87 E-value=1.8e-22 Score=199.17 Aligned_cols=179 Identities=18% Similarity=0.206 Sum_probs=148.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.+|||.|+..++.+ .|+++|++++.++.+|.||||+|+..|+.++++.|+ .+|
T Consensus 160 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g 235 (437)
T 1n11_A 160 RVAELLLERDAHPNAAG---KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL-QYG 235 (437)
T ss_dssp HHHHHHHHTTCCTTCCC---SSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHhCCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 78999999999999887 56678899999999877 899999999999999999999999999999999999 889
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCC------------
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEG------------ 146 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~------------ 146 (389)
++++.+|..|+||||+|+..|+.+++++|++++++ ++.+|.+|+||||+|+..++.++++.+..
T Consensus 236 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 311 (437)
T 1n11_A 236 GSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMG 311 (437)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSC
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCC
Confidence 99999999999999999999999999999999998 99999999999999999988777654421
Q ss_pred -chhhhhHHhhHHHHHHhhc-cchhhhhcccCCCChHHHHHhhh
Q 016470 147 -PALVLQEELLWYERVEEVS-MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 147 -~~~~l~~~l~~~~~v~~~~-~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
+++.........+.++-+. .....+.+|+.|.||++++.+.+
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC
Confidence 2232222222122222211 23346788999999999988764
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.87 E-value=1.9e-22 Score=192.06 Aligned_cols=113 Identities=16% Similarity=0.150 Sum_probs=101.1
Q ss_pred HHHHHHHh-CCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIR-RDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~-~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+.++.|++ .|.+++..| ..+.||||.|+..|+.+ .|+++|++++.+|.+|.||||+|+..|+.+++++|+ ++
T Consensus 38 ~~v~~ll~~~~~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll-~~ 113 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASD---GRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL-KH 113 (351)
T ss_dssp HHHHHHCCTTTTTCCCSS---TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHHhcCCCcccCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHH-HC
Confidence 45666665 488888877 56778899999999987 899999999999999999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKID 122 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d 122 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|
T Consensus 114 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~ 154 (351)
T 3utm_A 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD----PTLVN 154 (351)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----Ccccc
Confidence 999999999999999999999999999999999988 55444
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.87 E-value=9.5e-23 Score=172.07 Aligned_cols=139 Identities=16% Similarity=0.092 Sum_probs=121.5
Q ss_pred hhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChh
Q 016470 26 PKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLE 102 (389)
Q Consensus 26 ~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~ 102 (389)
++||.|+..|+.+ .|+++|++++ .|..|.||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+.+|+.+
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~ 81 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-RAGVSRDARTKVDRTPLHMAASEGHAN 81 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-TTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcChHH
Confidence 5699999999987 8899999886 5889999999999999999999999 889999999999999999999999999
Q ss_pred hHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHH
Q 016470 103 IFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEE 182 (389)
Q Consensus 103 iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~ 182 (389)
++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|.||++
T Consensus 82 ~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll------~-------------~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 82 IVEVLLKHGAD----VNAKDMLKMTALHWATEHNHQEVVELLI------K-------------YGADVHTQSKFCKTAFD 138 (153)
T ss_dssp HHHHHHTTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH------H-------------TTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHH------H-------------cCCCccccCCCCCCHHH
Confidence 99999999999 9999999999999999988776652211 1 12235678999999999
Q ss_pred HHHhhhh
Q 016470 183 LFATANN 189 (389)
Q Consensus 183 l~~~~~~ 189 (389)
++...+.
T Consensus 139 ~A~~~~~ 145 (153)
T 1awc_B 139 ISIDNGN 145 (153)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9987653
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.87 E-value=1.8e-22 Score=186.65 Aligned_cols=176 Identities=16% Similarity=0.113 Sum_probs=126.8
Q ss_pred HHHHHHHh----CCCCCcccc-ccccCCchhhhhhhcC---CCch---hhhhcCCCC-------C----CCcCCCCCHHH
Q 016470 2 ELARFLIR----RDTSWEITD-SIQDQSKPKIHRYGAN---PNAS---SVDQKGIGE-------S----SAIDNAETPLF 59 (389)
Q Consensus 2 eiv~~Ll~----~ga~vn~~~-~~~~~~~~~Lh~a~~~---~~~~---~Ll~~ga~~-------n----~~d~~G~tpLh 59 (389)
++++.|++ .+++++..+ .....+.||||+|+.. |+.+ .|+++|+++ | .+|..|.||||
T Consensus 27 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~ 106 (273)
T 2pnn_A 27 QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALH 106 (273)
T ss_dssp STTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHH
T ss_pred HHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHH
Confidence 45566665 666655221 1125677889999965 7765 888988653 2 26778999999
Q ss_pred HHHHcCCHHHHHHHHHHCCCcccccCC--------------CCCcHHHHHHHcCChhhHHHHHh---cCCcccccccccc
Q 016470 60 LATKSGCIEIVKEIFNVYPQAVEHIDD--------------EGRNILHVAIKYRQLEIFELVIQ---MEVPMRRLVRKID 122 (389)
Q Consensus 60 ~Aa~~g~~~~v~~Ll~~~~~~~~~~d~--------------~G~t~Lh~A~~~g~~~iv~~Ll~---~~~~~~~l~~~~d 122 (389)
+|+..|+.+++++|+ ++|++++.+|. .|+||||+|+.+|+.+++++|++ +|++ ++.+|
T Consensus 107 ~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad----~~~~d 181 (273)
T 2pnn_A 107 IAIERRNMTLVTLLV-ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD----ISARD 181 (273)
T ss_dssp HHHHTTCHHHHHHHH-HTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTCCC
T ss_pred HHHHcCCHHHHHHHH-HCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC----ceeeC
Confidence 999999999999999 77999999987 79999999999999999999999 8998 99999
Q ss_pred cccccccccccccCCCCccccCCCchhhh-hHHhhHH--HHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 123 NGGNTLLHMTGIKRSDYVPEKMEGPALVL-QEELLWY--ERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 123 ~~G~TpLhlA~~~~~~~~~~~l~~~~~~l-~~~l~~~--~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
.+|+||||+|+..++.... .... ..-..+. ....--......+.+|.+|.||++++.+.+
T Consensus 182 ~~g~tpLh~A~~~~~~~~~------~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g 244 (273)
T 2pnn_A 182 SVGNTVLHALVEVADNTVD------NTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSG 244 (273)
T ss_dssp TTSCCHHHHHHHHCCSCHH------HHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred CCCCcHHHHHHHccCcchh------HHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhC
Confidence 9999999999987763221 0000 0000000 000000000112468999999999998765
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.87 E-value=8.5e-23 Score=176.97 Aligned_cols=141 Identities=17% Similarity=0.173 Sum_probs=121.2
Q ss_pred CchhhhhhhcCCCch---hhhhc-CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcC
Q 016470 24 SKPKIHRYGANPNAS---SVDQK-GIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 24 ~~~~Lh~a~~~~~~~---~Ll~~-ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g 99 (389)
+.++||.|+..|+.+ .|+++ +.+++.+|..|.||||+|+..|+.+++++|+ +.|++++.+|.+|+||||+|+.+|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLI-MRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcC
Confidence 445699999999988 56666 7889999999999999999999999999999 789999999999999999999999
Q ss_pred ChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCC
Q 016470 100 QLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFT 179 (389)
Q Consensus 100 ~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~t 179 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+. + .....+.+|.+|+|
T Consensus 84 ~~~~v~~Ll~~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll------~-------------~ga~~~~~~~~g~t 140 (179)
T 3f6q_A 84 HRDIVQKLLQYKAD----INAVNEHGNVPLHYACFWGQDQVAEDLV------A-------------NGALVSICNKYGEM 140 (179)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH------H-------------TTCCSSBCCTTSCC
T ss_pred CHHHHHHHHHcCCC----CCccCCCCCCHHHHHHHcCCHHHHHHHH------H-------------CCCCcchhccCCCC
Confidence 99999999999999 9999999999999999998766652211 1 12235788999999
Q ss_pred hHHHHHhhh
Q 016470 180 PEELFATAN 188 (389)
Q Consensus 180 p~~l~~~~~ 188 (389)
|++++.+..
T Consensus 141 pl~~A~~~~ 149 (179)
T 3f6q_A 141 PVDKAKAPL 149 (179)
T ss_dssp GGGGSCHHH
T ss_pred cHHHHHHHH
Confidence 999987654
No 68
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=1.2e-22 Score=183.01 Aligned_cols=139 Identities=20% Similarity=0.213 Sum_probs=119.8
Q ss_pred HHHHHHHhCCCCCccc--cccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcC-------------CCCCHHHHHHH
Q 016470 2 ELARFLIRRDTSWEIT--DSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAID-------------NAETPLFLATK 63 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~--~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~-------------~G~tpLh~Aa~ 63 (389)
|++++|+++|+++... +.....+.+|||.|+..|+.+ .|+++|++++.++. +|.||||+|+.
T Consensus 51 ~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 130 (232)
T 2rfa_A 51 EAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAAC 130 (232)
T ss_dssp HHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHH
T ss_pred HHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHH
Confidence 7899999999886321 111246778899999999877 89999999988765 79999999999
Q ss_pred cCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhH----HHHHhcCCccc--ccccccccccccccccccccCC
Q 016470 64 SGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIF----ELVIQMEVPMR--RLVRKIDNGGNTLLHMTGIKRS 137 (389)
Q Consensus 64 ~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv----~~Ll~~~~~~~--~l~~~~d~~G~TpLhlA~~~~~ 137 (389)
.|+.+++++|+ ++|++++.+|.+|+||||+|+.+|+.+++ ++|+++|++.. .+.+.+|.+|+||||+|+..++
T Consensus 131 ~~~~~~v~~Ll-~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 131 VGSEEIVRLLI-EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred cCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 99999999999 78999999999999999999999999988 99999998711 1226899999999999999998
Q ss_pred CCcc
Q 016470 138 DYVP 141 (389)
Q Consensus 138 ~~~~ 141 (389)
.+++
T Consensus 210 ~~~v 213 (232)
T 2rfa_A 210 IVMF 213 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8777
No 69
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.87 E-value=7.8e-23 Score=187.55 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=119.0
Q ss_pred CHHHHHHHhCCCCCc---------cccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCc--------------CCC
Q 016470 1 MELARFLIRRDTSWE---------ITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAI--------------DNA 54 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn---------~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d--------------~~G 54 (389)
.|++++|+++|++++ ..+.+ ..+.||||+|+..|+.+ .|+++|++++.+| ..|
T Consensus 62 ~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d-~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 140 (260)
T 3jxi_A 62 NDTIPILLDIAEKTGNMREFINSPFRDVY-YRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFG 140 (260)
T ss_dssp CTHHHHHHHHHHHTTCHHHHHTCCBCCSS-EESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSC
T ss_pred HHHHHHHHHhcccccchHhhhcccccccc-cCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCC
Confidence 478999999986532 22211 35678899999999987 8999999999998 689
Q ss_pred CCHHHHHHHcCCHHHHHHHHHH--CCCcccccCCCCCcHHHHHHHcCC---------hhhHHHHHhcCCcccccc-----
Q 016470 55 ETPLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFELVIQMEVPMRRLV----- 118 (389)
Q Consensus 55 ~tpLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~l~----- 118 (389)
.||||+|+..|+.+++++|++. +|++++.+|.+|+||||+|+..++ .+++++|+++|++ +
T Consensus 141 ~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~ 216 (260)
T 3jxi_A 141 ELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK----LFPDTN 216 (260)
T ss_dssp SSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH----HCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc----cccccc
Confidence 9999999999999999999932 899999999999999999999888 6999999999988 6
Q ss_pred --cccccccccccccccccCCCCcc
Q 016470 119 --RKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 119 --~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+.+|.+|+||||+|++.++.+++
T Consensus 217 ~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 217 LEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred hhhcccCCCCCHHHHHHHcCCHHHH
Confidence 78999999999999999988777
No 70
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.2e-22 Score=168.23 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=108.2
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.++||+|+..|+.+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+.+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLL-KNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHc
Confidence 44567899999999987 889999999999999999999999999999999999 78999999999999999999999
Q ss_pred CChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 91 ~~~~~v~~Ll~~g~~----~~~~~~~g~tpl~~A~~~~~~~~~ 129 (136)
T 2jab_A 91 GHLEIAEVLLKHGAD----VNAQDKFGKTAFDISIGNGNEDLA 129 (136)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHcCCC----CcCcCCCCCCHHHHHHHCCCHHHH
Confidence 999999999999999 999999999999999999887665
No 71
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=1.9e-22 Score=163.87 Aligned_cols=109 Identities=15% Similarity=0.150 Sum_probs=101.9
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.++||.|+..|+.+ .|+++|++++.+|..|+||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+..
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-LKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-TTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHc
Confidence 45668899999999987 789999999999999999999999999999999999 88999999999999999999999
Q ss_pred CChhhHHHHHhcCCccccccccccccccccccccccc
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIK 135 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~ 135 (389)
|+.+++++|+++|++ ++.+|.+|+||||+|...
T Consensus 84 ~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 84 GHVSCVKLLLSKGAD----KTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCCH
T ss_pred CCHHHHHHHHHcCCC----CCCcCCCCCCHHHHhCCH
Confidence 999999999999999 999999999999999654
No 72
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=4.1e-23 Score=175.13 Aligned_cols=136 Identities=10% Similarity=0.083 Sum_probs=104.0
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCc-HHHHHHH
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRN-ILHVAIK 97 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t-~Lh~A~~ 97 (389)
..+.++||.|+..|+.+ .|+++|++++.+|..|+||||+|+ .|+.+++++|+ ++|++++.+|..|+| |||+|+.
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll-~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLL-LHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHH-TTTCCCCCCCTTTCCCHHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHH-HcCCCCCCcCCCCCcHHHHHHHH
Confidence 45567799999999877 788999999999999999999985 89999999999 778999999999998 9999999
Q ss_pred cCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCC
Q 016470 98 YRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMG 177 (389)
Q Consensus 98 ~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g 177 (389)
+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+... ....+.+|..|
T Consensus 88 ~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g 144 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGAR----LDVRDAWGRLPVDLAEELGHRDVARYLRAA-------------------AGGTRGSNHAR 144 (156)
T ss_dssp HTCHHHHHHHHHHTCC----SSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-------------------C----------
T ss_pred CCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHhCHHHHHHHHHHc-------------------CCCCCccCcCc
Confidence 9999999999999998 899999999999999998887766333222 12245667777
Q ss_pred CChHH
Q 016470 178 FTPEE 182 (389)
Q Consensus 178 ~tp~~ 182 (389)
.||.+
T Consensus 145 ~t~~~ 149 (156)
T 1bi7_B 145 IDAAE 149 (156)
T ss_dssp -----
T ss_pred Ccccc
Confidence 77765
No 73
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.86 E-value=5e-22 Score=168.40 Aligned_cols=122 Identities=13% Similarity=0.071 Sum_probs=98.0
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCC-HHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAET-PLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~t-pLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|..+ ..+.+|||.|+ .|+.+ .|+++|++++.+|..|.| |||+|+..|+.+++++|+ ++
T Consensus 26 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll-~~ 100 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPN---SYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RA 100 (156)
T ss_dssp HHHHHHHTTTCCTTCCC---SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH-HH
T ss_pred HHHHHHHHcCCCCCCCC---CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHH-Hc
Confidence 78999999999999887 56678899885 77766 899999999999999999 999999999999999999 67
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMT 132 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA 132 (389)
|++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|..|+||.+-+
T Consensus 101 ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 101 GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG----TRGSNHARIDAAEGP 151 (156)
T ss_dssp TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC----CCccCcCcCcccccC
Confidence 999999999999999999999999999999999999 999999999998743
No 74
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=9.2e-23 Score=188.69 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=119.1
Q ss_pred CHHHHHHHhCCCCC-------cc--ccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcC--------------CC
Q 016470 1 MELARFLIRRDTSW-------EI--TDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAID--------------NA 54 (389)
Q Consensus 1 ~eiv~~Ll~~ga~v-------n~--~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~--------------~G 54 (389)
.|++++|+++|+++ |. .+.+ ..+.||||+|+..|+.+ +|+++|++++.+|. .|
T Consensus 70 ~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d-~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g 148 (273)
T 2pnn_A 70 NDTIALLLDVARKTDSLKQFVNASYTDSY-YKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFG 148 (273)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHTCCCCSTT-TTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSC
T ss_pred hHHHHHHHHhhccccchhHHhhccccccc-CCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCC
Confidence 47999999998763 22 1111 35678899999999987 89999999999987 79
Q ss_pred CCHHHHHHHcCCHHHHHHHHHH--CCCcccccCCCCCcHHHHHHHcCC---------hhhHHHHHhcCCccccccc----
Q 016470 55 ETPLFLATKSGCIEIVKEIFNV--YPQAVEHIDDEGRNILHVAIKYRQ---------LEIFELVIQMEVPMRRLVR---- 119 (389)
Q Consensus 55 ~tpLh~Aa~~g~~~~v~~Ll~~--~~~~~~~~d~~G~t~Lh~A~~~g~---------~~iv~~Ll~~~~~~~~l~~---- 119 (389)
.||||+|+..|+.+++++|++. +|++++.+|.+|+||||+|+..|+ .+++++|+++|++ ++
T Consensus 149 ~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~----~n~~~~ 224 (273)
T 2pnn_A 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK----LHPTLK 224 (273)
T ss_dssp BSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HCTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh----cccccc
Confidence 9999999999999999999933 899999999999999999999998 7999999999988 65
Q ss_pred ---ccccccccccccccccCCCCcc
Q 016470 120 ---KIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 120 ---~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
.+|.+|+||||+|++.++.+++
T Consensus 225 ~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 225 LEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred cccccCCCCCCHHHHHHHhChHHHH
Confidence 5899999999999999988776
No 75
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=3.3e-22 Score=190.52 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=112.5
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCC------chhhhhcC-CCCCCCcCCCCCHHHHHHH----cCCHHH
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPN------ASSVDQKG-IGESSAIDNAETPLFLATK----SGCIEI 69 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~------~~~Ll~~g-a~~n~~d~~G~tpLh~Aa~----~g~~~~ 69 (389)
.|+|++|+++|+++|.++ ..+.||||+|+..|+ ++.|++++ ++++.+|..|+||||+|+. .|+.++
T Consensus 144 ~~~v~~Ll~~Gad~n~~d---~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~ 220 (327)
T 1sw6_A 144 LELVKHLVKHGSNRLYGD---NMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAA 220 (327)
T ss_dssp HHHHHHHHHTTCCTTBCC---TTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHH
T ss_pred HHHHHHHHHcCCCCCCcC---CCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHH
Confidence 379999999999999888 567788999999866 24677776 7899999999999999999 899999
Q ss_pred HHHHHHHC-------------------CC-------------------------cccccCCCCCcHHHHHHHcCChhhHH
Q 016470 70 VKEIFNVY-------------------PQ-------------------------AVEHIDDEGRNILHVAIKYRQLEIFE 105 (389)
Q Consensus 70 v~~Ll~~~-------------------~~-------------------------~~~~~d~~G~t~Lh~A~~~g~~~iv~ 105 (389)
++.|++.. ++ +++.+|.+|+||||+|+.+|+.++++
T Consensus 221 v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~ 300 (327)
T 1sw6_A 221 AKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVD 300 (327)
T ss_dssp HHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 99998431 11 47888999999999999999999999
Q ss_pred HHHhcCCcccccccccccccccccccccccC
Q 016470 106 LVIQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 106 ~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~ 136 (389)
+|+++|++ ++.+|.+|+||||+|++.|
T Consensus 301 ~Ll~~Gad----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 301 ALLDYGAD----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHHTTCC----TTCCCTTSCCGGGGTCC--
T ss_pred HHHHcCCC----CcccCCCCCCHHHHHHhcC
Confidence 99999999 9999999999999999764
No 76
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.86 E-value=1.5e-22 Score=189.01 Aligned_cols=92 Identities=13% Similarity=0.108 Sum_probs=69.7
Q ss_pred CCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccccc
Q 016470 46 GESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGG 125 (389)
Q Consensus 46 ~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G 125 (389)
++|.+|.+|.||||+|+..|+.+++++|+ +.|++++.+| |+||||+|+.+|+.+++++|+++|++ ++.+|.+|
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~d~~g 95 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLL-NAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLD----DSQFDDKG 95 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCC----TTCCCTTS
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHH-hCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCC
Confidence 56777777888888888888888888777 5677776663 77888888888888888888887777 77777778
Q ss_pred ccccccccccCCCCccccC
Q 016470 126 NTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 126 ~TpLhlA~~~~~~~~~~~l 144 (389)
+||||+|+..++.++++.+
T Consensus 96 ~t~L~~A~~~g~~~~v~~L 114 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLF 114 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHH
Confidence 8888888777776666443
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.86 E-value=2.3e-22 Score=169.95 Aligned_cols=138 Identities=16% Similarity=0.162 Sum_probs=120.4
Q ss_pred chhhhhhhcCCCch---hhhhc-CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCC
Q 016470 25 KPKIHRYGANPNAS---SVDQK-GIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 25 ~~~Lh~a~~~~~~~---~Ll~~-ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~ 100 (389)
.++||.|+..|+.+ .|+++ +.+++.+|..|.||||+ +..|+.+++++|+ +.|++++.+|..|+||||+|+.+|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELL-KQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 46799999999988 56666 45999999999999999 9999999999999 7899999999999999999999999
Q ss_pred hhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCCh
Q 016470 101 LEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTP 180 (389)
Q Consensus 101 ~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp 180 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+.. . ...+.+|.+|.||
T Consensus 81 ~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----------------~---~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 81 LDTLKVLVEHGAD----VNVPDGTGALPIHLAVQEGHTAVVSFLAA-----------------E---SDLHRRDARGLTP 136 (156)
T ss_dssp HHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHHTCHHHHHHHHT-----------------T---SCTTCCCTTSCCH
T ss_pred HHHHHHHHHcCCC----CCCcCCCCCcHHHHHHHhChHHHHHHHHh-----------------c---cCCCCcCCCCCCH
Confidence 9999999999999 99999999999999999987766522111 1 2357789999999
Q ss_pred HHHHHhhh
Q 016470 181 EELFATAN 188 (389)
Q Consensus 181 ~~l~~~~~ 188 (389)
++++.+.+
T Consensus 137 l~~A~~~~ 144 (156)
T 1bd8_A 137 LELALQRG 144 (156)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHcC
Confidence 99998765
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.86 E-value=7.2e-22 Score=191.50 Aligned_cols=178 Identities=14% Similarity=0.109 Sum_probs=128.7
Q ss_pred HHHHHHhCCCCCccccccccCCchhhhhhhc--CCCch--------hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 3 LARFLIRRDTSWEITDSIQDQSKPKIHRYGA--NPNAS--------SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 3 iv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~--~~~~~--------~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
++++|++.+.+..... ++.++.-.-+.. ...++ .|+++|+++|.+|.+|.||||+|+..|+.+++++
T Consensus 108 ~~~~L~~~~~n~~d~~---~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~ 184 (373)
T 2fo1_E 108 ITEPITRESVNIIDPR---HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAY 184 (373)
T ss_dssp CCSCCSTTTTTTCCCS---SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHhccccccccCCc---CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHH
Confidence 4455566665544433 344455443322 22222 5679999999999999999999999999999999
Q ss_pred HHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcC---CcccccccccccccccccccccccC---CCCccccCC-
Q 016470 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQME---VPMRRLVRKIDNGGNTLLHMTGIKR---SDYVPEKME- 145 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~---~~~~~l~~~~d~~G~TpLhlA~~~~---~~~~~~~l~- 145 (389)
|+ ++|++++.+|..|+||||+|+.+|+.+++++|++++ ++ ++.+|.+|+||||+|+..+ +.++++.+.
T Consensus 185 Ll-~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~ 259 (373)
T 2fo1_E 185 LM-KAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD----IEELDRNGMTALMIVAHNEGRDQVASAKLLVE 259 (373)
T ss_dssp HH-HTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT----TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH
T ss_pred HH-HCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC----hhhcCCCCCCHHHHHHHhCCcchHHHHHHHHH
Confidence 99 789999999999999999999999999999999987 56 8999999999999999876 444433221
Q ss_pred --------------------CchhhhhHHhhHHHHHHhhc--cchhhhhcccCCCChHHHHHhhh
Q 016470 146 --------------------GPALVLQEELLWYERVEEVS--MPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 146 --------------------~~~~~l~~~l~~~~~v~~~~--~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
...+.........+.++.+. .+...+.+|.+|.||++++...+
T Consensus 260 ~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g 324 (373)
T 2fo1_E 260 KGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEG 324 (373)
T ss_dssp HTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHT
T ss_pred CCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcC
Confidence 12222222222223333322 12456788999999999987654
No 79
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.85 E-value=2.1e-21 Score=181.38 Aligned_cols=114 Identities=18% Similarity=0.193 Sum_probs=106.4
Q ss_pred CCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcC
Q 016470 23 QSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g 99 (389)
.+.++||.|+..|+.+ .|+++|+++|.+|.+|.||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+.+|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcC
Confidence 3457799999999987 889999999999999999999999999999999999 789999999999999999999999
Q ss_pred ChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 100 QLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 100 ~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
+.+++++|+++|++ ++.+|.+|.||||+|+..++.+++
T Consensus 118 ~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 155 (299)
T 1s70_B 118 YLDIAEYLISQGAH----VGAVNSEGDTPLDIAEEEAMEELL 155 (299)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHCCSHHHHHHH
T ss_pred CHHHHHHHHhCCCC----CCCcCCCCCCHHHHHHhcchHHHH
Confidence 99999999999999 999999999999999987766554
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=1.2e-22 Score=177.91 Aligned_cols=131 Identities=14% Similarity=0.087 Sum_probs=112.3
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCC-------chhhhhcCCCCCCCcCCCCCHHHHHHHcCC------HH
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPN-------ASSVDQKGIGESSAIDNAETPLFLATKSGC------IE 68 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~-------~~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~------~~ 68 (389)
+.++.+++.|.+ ..+ ...|.||||+|+..++ +++|+++|+|+|.+|.+|+||||+|+..|+ .+
T Consensus 20 ~~~~~l~~~~~~--~~~--~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~ 95 (186)
T 3t8k_A 20 EDFLELFEKGYE--DKE--SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTE 95 (186)
T ss_dssp HHHHHHHHHSSS--CHH--HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHhcCcc--ccc--ccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHH
Confidence 456677776644 333 2446788999999886 338999999999999999999999999987 68
Q ss_pred HHHHHHHHCCCcccccCCCCC-cHHHHHHHcCC-----hhhHHHHHh-cCCcccccccccccccccccccccccCCCCcc
Q 016470 69 IVKEIFNVYPQAVEHIDDEGR-NILHVAIKYRQ-----LEIFELVIQ-MEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 69 ~v~~Ll~~~~~~~~~~d~~G~-t~Lh~A~~~g~-----~~iv~~Ll~-~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
++++|+ ++|++++.+|.+|+ ||||+|+..+. .+++++|++ +|++ ++.+|.+|+||||+|++.++.+++
T Consensus 96 iv~~Ll-~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad----~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 96 LCKIFL-EKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ----LLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp HHHHHH-HTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred HHHHHH-HCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC----CcccCCCCCCHHHHHHHcCCHHHH
Confidence 899999 88999999999999 99999999554 469999999 9999 999999999999999999887665
No 81
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=3.9e-22 Score=192.14 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=120.2
Q ss_pred HHHHHHHhC----CCCCcc-----------------ccccccCCchhhhhhhcCC--Cch---hhhhcCCCCCCCcCCCC
Q 016470 2 ELARFLIRR----DTSWEI-----------------TDSIQDQSKPKIHRYGANP--NAS---SVDQKGIGESSAIDNAE 55 (389)
Q Consensus 2 eiv~~Ll~~----ga~vn~-----------------~~~~~~~~~~~Lh~a~~~~--~~~---~Ll~~ga~~n~~d~~G~ 55 (389)
|++++|+++ |++++. .+ ..+.||||.|+..| +.+ .|+++|++++.+|..|.
T Consensus 98 ~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 98 DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH---CKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE---ESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC---CCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 577777777 666665 55 55678899999999 766 89999999999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHHHCCCc-----ccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccc
Q 016470 56 TPLFLATKSGCIEIVKEIFNVYPQA-----VEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLH 130 (389)
Q Consensus 56 tpLh~Aa~~g~~~~v~~Ll~~~~~~-----~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLh 130 (389)
||||+|+..|+.+++++|+ +++++ ++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||
T Consensus 175 t~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMM-DTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGID----VNMEDNEHTVPLY 249 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHH-HHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC----TTCCCTTSCCHHH
T ss_pred CHHHHHHHcCCHHHHHHHH-hcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHH
Confidence 9999999999999999999 66666 999999999999999999999999999999999 9999999999999
Q ss_pred cccccCCCCcccc
Q 016470 131 MTGIKRSDYVPEK 143 (389)
Q Consensus 131 lA~~~~~~~~~~~ 143 (389)
+|+..++.++++.
T Consensus 250 ~A~~~g~~~~v~~ 262 (364)
T 3ljn_A 250 LSVRAAMVLLTKE 262 (364)
T ss_dssp HHHHTCCHHHHHH
T ss_pred HHHHhChHHHHHH
Confidence 9999998887733
No 82
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.84 E-value=1.2e-21 Score=170.65 Aligned_cols=110 Identities=16% Similarity=0.207 Sum_probs=102.4
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccC-CCCCcHHHHHHH
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHID-DEGRNILHVAIK 97 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~ 97 (389)
..+.||||.|+..|+.+ .|++ |+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+| .+|+||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHh
Confidence 35678899999999887 6778 9999999999999999999999999999999 7899999998 899999999999
Q ss_pred cCChhhHHHHHhcCCcccccccccccccccccccccccCC
Q 016470 98 YRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRS 137 (389)
Q Consensus 98 ~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~ 137 (389)
.|+.+++++|+++|++ ++.+|.+|+||||+|++.++
T Consensus 120 ~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~ 155 (183)
T 3deo_A 120 YVRPEVVEALVELGAD----IEVEDERGLTALELAREILK 155 (183)
T ss_dssp TTCHHHHHHHHHHTCC----TTCCCTTSCCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCC----CcCCCCCCCCHHHHHHHhcc
Confidence 9999999999999999 99999999999999987543
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.9e-21 Score=157.49 Aligned_cols=113 Identities=27% Similarity=0.376 Sum_probs=106.2
Q ss_pred CchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCC
Q 016470 24 SKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 24 ~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~ 100 (389)
|.||||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|.+++.+|..|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCcHHHHHHHcCh
Confidence 457799999999877 789999999999999999999999999999999999 7899999999999999999999999
Q ss_pred hhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 101 LEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 101 ~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 81 ~~~~~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 117 (126)
T 1n0r_A 81 LEVVKLLLEAGAD----VNAKDKNGRTPLHLAARNGHLEVV 117 (126)
T ss_dssp HHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCC----CcccCCCCCCHHHHHHHcCcHHHH
Confidence 9999999999998 999999999999999998876665
No 84
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=2.8e-21 Score=180.38 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=102.6
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.||||.|+..|+.+ .|+++|++++..+ +|.||||+|+..|+.+++++|+ ++|
T Consensus 106 ~~v~~Ll~~ga~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll-~~g 180 (285)
T 3d9h_A 106 SCVKILLKHGAQVNGVT---ADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLI-AYG 180 (285)
T ss_dssp HHHHHHHHTTCCSSCCC---TTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHCCCCCCCCC---CCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHH-HCC
Confidence 67888888888887776 45567788888877766 7778888876543 4888888888888888888888 677
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccC
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l 144 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++ +|.+|+||||+|+..++.++++.+
T Consensus 181 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~-~~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 181 GNIDHKISHLGTPLYLACENQQRACVKKLLESGAD----VN-QGKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC----TT-CCBTTBCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC----CC-CCCCCCCHHHHHHHcCCHHHHHHH
Confidence 78888888888888888888888888888888877 66 377788888888887776666433
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.83 E-value=1.4e-20 Score=155.55 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=100.6
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCC-CCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDN-AETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~-G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|..+ ..+.||||+|+. ++.+ .|+++|++++.+|.. |.||||+|+..|+.+++++|+ ++
T Consensus 26 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~ 100 (136)
T 1d9s_A 26 ETVRQLLEAGADPNALN---RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLH-RA 100 (136)
T ss_dssp HHHHHHHHTTCCTTCCC---TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHH-HT
T ss_pred HHHHHHHHcCCCcCCcC---CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 78999999999999887 567788999999 8877 899999999999999 999999999999999999999 88
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVP 113 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 113 (389)
|++++.+|..|+||||+|+.+|+.+++++|+++|++
T Consensus 101 ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 101 GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999874
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=1.9e-21 Score=160.93 Aligned_cols=120 Identities=22% Similarity=0.223 Sum_probs=102.5
Q ss_pred CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccc
Q 016470 44 GIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDN 123 (389)
Q Consensus 44 ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~ 123 (389)
|+|+ .+|.+|+||||+|+..|+.+++++|+ +.|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~ 74 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLL-QNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----VNTTGY 74 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHH-HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCG
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc----ccCcCC
Confidence 6788 78999999999999999999999999 78999999999999999999999999999999999998 999999
Q ss_pred ccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 124 GGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 124 ~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
+|+||||+|+..++.++++.+. + .....+.+|.+|.||++++....
T Consensus 75 ~g~t~L~~A~~~~~~~~v~~Ll-----------------~--~ga~~~~~~~~g~tpl~~A~~~~ 120 (137)
T 3c5r_A 75 QNDSPLHDAAKNGHVDIVKLLL-----------------S--YGASRNAVNIFGLRPVDYTDDES 120 (137)
T ss_dssp GGCCHHHHHHHTTCHHHHHHHH-----------------H--TTCCTTCCCTTSCCGGGGCCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-----------------H--cCCCCCCCCCCCCCHHHHHhhcc
Confidence 9999999999998776652211 1 12235788999999999987654
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.83 E-value=3.6e-21 Score=168.51 Aligned_cols=153 Identities=8% Similarity=-0.011 Sum_probs=117.6
Q ss_pred hhhhhhhcCCCch---hhhhcCCCCCCCc-CCCCCHHHHHHHcCCH----HHHHHHHHHCCCcccccCCCCCcHHHHHHH
Q 016470 26 PKIHRYGANPNAS---SVDQKGIGESSAI-DNAETPLFLATKSGCI----EIVKEIFNVYPQAVEHIDDEGRNILHVAIK 97 (389)
Q Consensus 26 ~~Lh~a~~~~~~~---~Ll~~ga~~n~~d-~~G~tpLh~Aa~~g~~----~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 97 (389)
+++|.|+..|+.+ .+++.+ ++.+| ..|+||||+|+.+|+. +++++|+ +.|++++.+|.+|+||||+|+.
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll-~~Gadvn~~d~~g~TpLh~a~~ 84 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLI-NKGADIKSRTKEGTTLFFPLFQ 84 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHH-HTTCCSSCCCTTCCCTHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHH
Confidence 4499999999988 344444 55566 7799999999999975 5899999 8899999999999999999999
Q ss_pred cCC------hhhHHHHHhcCCcccccccccccccc-cccccccccCCCCccccCCCchhhhhHHhhHHHHHHh-hc-cch
Q 016470 98 YRQ------LEIFELVIQMEVPMRRLVRKIDNGGN-TLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEE-VS-MPH 168 (389)
Q Consensus 98 ~g~------~~iv~~Ll~~~~~~~~l~~~~d~~G~-TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~-~~-~~~ 168 (389)
.|+ .+++++|+++|++ +|.+|.+|+ ||||+|+..+..... ..+.++. +. ...
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gad----in~~d~~g~ttpLh~A~~~~~~~~~---------------~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGAD----ITALYKPYKIVVFKNIFNYFVDENE---------------MIPLYKLIFSQSGL 145 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCC----SSSCBGGGTBCTTGGGGGCCSCHHH---------------HHHHHHHHHTSTTC
T ss_pred cCCcchhhHHHHHHHHHHCCCC----CCccCCCcCchHHHHHHHcCCChhh---------------HHHHHHHHHHhcCC
Confidence 997 4789999999999 999999999 999999985432100 0011111 12 345
Q ss_pred hhhhcccCCCChHHHHHhhhh-hHHHhHHHHHH
Q 016470 169 FRNHRNNMGFTPEELFATANN-ELRAQSKEWLI 200 (389)
Q Consensus 169 ~~~~~n~~g~tp~~l~~~~~~-~l~~~~~e~~~ 200 (389)
..+.+|++|+||++++.+.+. +..+...++.+
T Consensus 146 d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHH
Confidence 578999999999999988653 33444444444
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.83 E-value=6e-21 Score=171.75 Aligned_cols=136 Identities=20% Similarity=0.209 Sum_probs=98.8
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ .+.+.+|||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.++++.|+ +.+
T Consensus 56 ~~v~~Ll~~~~~~~~~~--~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~~ 132 (240)
T 3eu9_A 56 DLVKYYISKGAIVDQLG--GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLI-AKG 132 (240)
T ss_dssp HHHHHHHHTTCCTTCCB--TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCcchhhc--CCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHH-hcC
Confidence 67788888887766444 233566688877777765 677778888777778888888888888888888777 667
Q ss_pred CcccccCCCCCcHHHHHHHcCC-hhhHHHHHhcCCccccccccccc-ccccccccccccCCCCccccC
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQ-LEIFELVIQMEVPMRRLVRKIDN-GGNTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~-~~iv~~Ll~~~~~~~~l~~~~d~-~G~TpLhlA~~~~~~~~~~~l 144 (389)
++++.+|..|+||||+|+..++ .+++++|++.|++ ++.++. +|+||||+|+..++.++++.+
T Consensus 133 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (240)
T 3eu9_A 133 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNTTVISLL 196 (240)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCHHHHHHH
Confidence 7777777777777777776555 6777777777777 677665 777777777777766655443
No 89
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=2e-21 Score=174.28 Aligned_cols=119 Identities=16% Similarity=0.167 Sum_probs=107.8
Q ss_pred CCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcC
Q 016470 23 QSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYR 99 (389)
Q Consensus 23 ~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g 99 (389)
.+.++||.|+..|+.+ .|+++|++++.+|..|+||||+|+..|+.+++++|++..|++++.+|.+|+||||+|+.+|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 4567899999999877 8899999999999999999999999999999999994449999999999999999999999
Q ss_pred ChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCC
Q 016470 100 QLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKME 145 (389)
Q Consensus 100 ~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~ 145 (389)
+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+.
T Consensus 152 ~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 152 YADIVQLLLAKGAR----TDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp CHHHHHHHHHHTCC----SCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred CHHHHHHHHHcCCC----CccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 99999999999999 9999999999999999987776664443
No 90
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=177.17 Aligned_cols=126 Identities=15% Similarity=0.024 Sum_probs=104.2
Q ss_pred HHHHHHHhCCCCCccccc---cccCCchhhhhhhcC---CCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRRDTSWEITDS---IQDQSKPKIHRYGAN---PNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~---~~~~~~~~Lh~a~~~---~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+.++.|+++|++++.... ....+.||||+|+.. +..+ +|+++|+++|.+|.+|+||||+|+..|+.+++++
T Consensus 165 ~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~ 244 (301)
T 2b0o_E 165 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 244 (301)
T ss_dssp HHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 578889999999887310 125677889999986 5555 8999999999999999999999999999999999
Q ss_pred HHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCC
Q 016470 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSD 138 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~ 138 (389)
|+ ++|++++.+|.+|+||||+|+..|+.+++++|+++|++ .|+||||+|+..|+.
T Consensus 245 Ll-~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~----------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 245 LL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HH-HTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH----------TTSSCCC--------
T ss_pred HH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC----------CCCChhHHHHhcCCc
Confidence 99 78999999999999999999999999999999998754 589999999988763
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.82 E-value=3.4e-20 Score=169.11 Aligned_cols=108 Identities=17% Similarity=0.218 Sum_probs=101.0
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccC-CCCCcHHHHHHH
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHID-DEGRNILHVAIK 97 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d-~~G~t~Lh~A~~ 97 (389)
..+.||||.|+..|+.+ .|++ |+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+| ..|+||||+|+.
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll-~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLA-EAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHH-HTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCcCCCCCCCCHHHHHHH
Confidence 35678899999999987 6777 9999999999999999999999999999999 8899999998 889999999999
Q ss_pred cCChhhHHHHHhcCCccccccccccccccccccccccc
Q 016470 98 YRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIK 135 (389)
Q Consensus 98 ~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~ 135 (389)
+|+.+++++|+++|++ ++.+|.+|+||||+|+..
T Consensus 121 ~g~~~~v~~Ll~~ga~----~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 121 YVRPEVVEALVELGAD----IEVEDERGLTALELAREI 154 (244)
T ss_dssp TTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCC----CCCCCCCCCcHHHHHHHH
Confidence 9999999999999999 999999999999999863
No 92
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.81 E-value=6.6e-20 Score=151.57 Aligned_cols=106 Identities=17% Similarity=0.215 Sum_probs=99.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..| ..+.||||.|+..++.+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 28 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~g 103 (136)
T 2jab_A 28 DEVRILMANGADVNAKD---EYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL-KHG 103 (136)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 78999999999999887 56678899999999877 889999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcC
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQME 111 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~ 111 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|
T Consensus 104 ~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 104 ADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999875
No 93
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.81 E-value=1.6e-20 Score=178.85 Aligned_cols=129 Identities=14% Similarity=0.205 Sum_probs=111.4
Q ss_pred HHHHHHHh-CCCCCccccccccCCchhhhhhhcC---CCc----hhhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHH
Q 016470 2 ELARFLIR-RDTSWEITDSIQDQSKPKIHRYGAN---PNA----SSVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEI 73 (389)
Q Consensus 2 eiv~~Ll~-~ga~vn~~~~~~~~~~~~Lh~a~~~---~~~----~~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~L 73 (389)
|++++|++ .|+++|..+ ..+.+++|.++.. +.. ++|+++|+++|.+|.+|+||||+|+..|+.++++.|
T Consensus 182 ~~v~~LL~~~gad~n~~d---~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~L 258 (337)
T 4g8k_A 182 EVLKILLDEMGADVNACD---NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 258 (337)
T ss_dssp HHHHHHHHHSCCCTTCCC---TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhccCCCcCccC---CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHH
Confidence 78999995 699999888 5556667755433 332 278999999999999999999999999999999999
Q ss_pred HHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccc
Q 016470 74 FNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPE 142 (389)
Q Consensus 74 l~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~ 142 (389)
++..+++++.+|.+|+||||+|+++|+.+++++|+++|++ +|.+ ||||+|++.++.++++
T Consensus 259 l~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd----~n~~-----~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 259 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS----TDCG-----DLVMTARRNYDHSLVK 318 (337)
T ss_dssp HTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS----STTC-----CHHHHHHHTTCHHHHH
T ss_pred HHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCC-----CHHHHHHHcCCHHHHH
Confidence 9667899999999999999999999999999999999998 6654 5999999999877763
No 94
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=3.2e-20 Score=168.58 Aligned_cols=128 Identities=12% Similarity=0.078 Sum_probs=115.7
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|+++|..| ..+.||||+|+..|+.+ .|+++|+++|.+|.+|+||||+|+..|+.+++++|+ ++|
T Consensus 51 ~~v~~Ll~~g~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll-~~g 126 (239)
T 1ycs_B 51 DLVQRIIYEVDDPSLPN---DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV-ESG 126 (239)
T ss_dssp HHHHHHTSTTSSCCCCC---TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCcC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcC
Confidence 78999999999999888 56778899999999877 899999999999999999999999999999999999 889
Q ss_pred CcccccCCCCC-cHHHHH--HHcCChhhHHHHHhcCCccccccccc---------ccccccccccccccCC
Q 016470 79 QAVEHIDDEGR-NILHVA--IKYRQLEIFELVIQMEVPMRRLVRKI---------DNGGNTLLHMTGIKRS 137 (389)
Q Consensus 79 ~~~~~~d~~G~-t~Lh~A--~~~g~~~iv~~Ll~~~~~~~~l~~~~---------d~~G~TpLhlA~~~~~ 137 (389)
++++.+|..|. ||||+| +..|+.+++++|+++|++ ++.+ |..|.++++++.+.|.
T Consensus 127 a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~----~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 127 AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK----MGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH----TTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhc----ccccccceEEEEeccCCCCCCcccccCCC
Confidence 99999998877 999999 888999999999999887 4443 6778899999888765
No 95
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.80 E-value=2.6e-19 Score=144.78 Aligned_cols=108 Identities=24% Similarity=0.390 Sum_probs=101.3
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
+++++|+++|++++..+ ..+.+|||.|+..++.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|
T Consensus 16 ~~v~~Ll~~~~~~~~~~---~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll-~~g 91 (126)
T 1n0r_A 16 EVVKLLLEAGADVNAKD---KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAG 91 (126)
T ss_dssp HHHHHHHHHTCCTTCCC---TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCCcC---CCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHH-HcC
Confidence 78999999999998887 56678899999999877 889999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVP 113 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 113 (389)
++++.+|.+|+||||+|+.+|+.+++++|+++|++
T Consensus 92 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 92 ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999875
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=1.5e-19 Score=174.62 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=107.6
Q ss_pred CchhhhhhhcC-CCch---hhhhcCCCCCCCc--CCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHH
Q 016470 24 SKPKIHRYGAN-PNAS---SVDQKGIGESSAI--DNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIK 97 (389)
Q Consensus 24 ~~~~Lh~a~~~-~~~~---~Ll~~ga~~n~~d--~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~ 97 (389)
+.++||.|+.. ++.+ .|+++|+|+|..| .+|.||||+|+..|+.+++++|+ .+|++++.+|.+|+||||+|+.
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLL-QNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHH
Confidence 34579999998 8877 7899999999998 88999999999999999999999 7899999999999999999999
Q ss_pred cCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCC
Q 016470 98 YRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMG 177 (389)
Q Consensus 98 ~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g 177 (389)
.|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.|.. .. .........+..+
T Consensus 278 ~g~~~~v~~LL~~Gad----~~~~d~~G~TpL~~A~~~g~~~iv~lLl~------~~----------~~~~~~~~~~~~~ 337 (368)
T 3jue_A 278 LGHTGLACLFLKRGAD----LGARDSEGRDPLTIAMETANADIVTLLRL------AK----------MREAEAAQGQAGD 337 (368)
T ss_dssp HTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHH------HH----------C------------
T ss_pred cCcHHHHHHHHHCcCC----CCCcCCCCCCHHHHHHHCCCHHHHHHHHH------cC----------CCcccccccCCCC
Confidence 9999999999999999 99999999999999999988777632211 10 0111123456678
Q ss_pred CChHHHHHhh
Q 016470 178 FTPEELFATA 187 (389)
Q Consensus 178 ~tp~~l~~~~ 187 (389)
.|+++++...
T Consensus 338 ~t~l~i~~~~ 347 (368)
T 3jue_A 338 ETYLDIFRDF 347 (368)
T ss_dssp ----------
T ss_pred CCHHHHHHHH
Confidence 8888887654
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.78 E-value=4.7e-20 Score=173.70 Aligned_cols=133 Identities=18% Similarity=0.161 Sum_probs=111.5
Q ss_pred hhhhhhhcCCCch---hhhhcCCCCCC------CcCCCCCHHHHHHHc---CCHHHHHHHHHHCCCcccccCCCCCcHHH
Q 016470 26 PKIHRYGANPNAS---SVDQKGIGESS------AIDNAETPLFLATKS---GCIEIVKEIFNVYPQAVEHIDDEGRNILH 93 (389)
Q Consensus 26 ~~Lh~a~~~~~~~---~Ll~~ga~~n~------~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 93 (389)
.+||.|+..|+.+ .|++.|++++. +|..|.||||+|+.. |+.+++++|+ .+|++++.+|.+|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll-~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHH-HHSSCTTCCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHH-hcCCCCCCCCCCCCCHHH
Confidence 4599999999987 77899999998 689999999999997 8999999999 679999999999999999
Q ss_pred HHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhc
Q 016470 94 VAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHR 173 (389)
Q Consensus 94 ~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~ 173 (389)
+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+ + +..
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~~~~~iv~~L------l-------------------~~g 282 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRAL----VGTVNEAGETALDIARKKHHKECEELL------E-------------------QAQ 282 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCC----CSCCCTTSCCHHHHHHHHTCHHHHHHH------H-------------------HHH
T ss_pred HHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH------H-------------------Hhc
Confidence 99999999999999999999 999999999999999999887665211 1 112
Q ss_pred ccCCCChHHHHHhhh
Q 016470 174 NNMGFTPEELFATAN 188 (389)
Q Consensus 174 n~~g~tp~~l~~~~~ 188 (389)
...|.||++++.+.+
T Consensus 283 a~~g~tpLh~A~~~g 297 (301)
T 2b0o_E 283 AGTFAFPLHVDYSWV 297 (301)
T ss_dssp HHTTSSCCC------
T ss_pred CCCCCChhHHHHhcC
Confidence 236889999987654
No 98
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.78 E-value=4.6e-19 Score=136.57 Aligned_cols=89 Identities=26% Similarity=0.393 Sum_probs=68.6
Q ss_pred CchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCC
Q 016470 24 SKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQ 100 (389)
Q Consensus 24 ~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~ 100 (389)
|.||||.|+..|+.+ .|+++|+++|.+|.+|.||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+..|+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCC
Confidence 346688887777766 677778888888888888888888888888888777 6777788888888888888888888
Q ss_pred hhhHHHHHhcCCc
Q 016470 101 LEIFELVIQMEVP 113 (389)
Q Consensus 101 ~~iv~~Ll~~~~~ 113 (389)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 8888888877753
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=1.1e-19 Score=147.38 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=95.3
Q ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccccccccc
Q 016470 50 AIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLL 129 (389)
Q Consensus 50 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpL 129 (389)
.+..|.||||.|+..|+.++++.|+ +.+.+++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+|||
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~d~~g~tpL 77 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYV-AKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD----INAPDKHHITPL 77 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHH-HTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTSCCHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHH-HcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCHH
Confidence 3567899999999999999999999 78899999999999999999999999999999999999 999999999999
Q ss_pred ccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHh
Q 016470 130 HMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFAT 186 (389)
Q Consensus 130 hlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~ 186 (389)
|+|+..++.++++.+. + .....+.+|.+|.||++++..
T Consensus 78 ~~A~~~~~~~~v~~Ll-----------------~--~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLL-----------------S--KGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHTCHHHHHHHH-----------------H--TTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHcCCHHHHHHHH-----------------H--cCCCCCCcCCCCCCHHHHhCC
Confidence 9999998766652211 1 122257889999999998843
No 100
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=2.2e-19 Score=138.41 Aligned_cols=84 Identities=32% Similarity=0.471 Sum_probs=78.8
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccc
Q 016470 53 NAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMT 132 (389)
Q Consensus 53 ~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA 132 (389)
+|+||||+|+..|+.+++++|+ +.|++++.+|.+|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~t~l~~A 75 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD----VNAKDKNGRTPLHLA 75 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCccCCCCCCHHHHH
Confidence 5899999999999999999999 78999999999999999999999999999999999999 999999999999999
Q ss_pred cccCCCCcc
Q 016470 133 GIKRSDYVP 141 (389)
Q Consensus 133 ~~~~~~~~~ 141 (389)
+..++.+++
T Consensus 76 ~~~~~~~~~ 84 (93)
T 1n0q_A 76 ARNGHLEVV 84 (93)
T ss_dssp HHTTCHHHH
T ss_pred HHcCCHHHH
Confidence 999887666
No 101
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.76 E-value=3.7e-19 Score=142.42 Aligned_cols=103 Identities=25% Similarity=0.294 Sum_probs=94.9
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.++||.|+..|+.+ .|+++|++++.+|..|.||||+|+..|+.+++++|+ ++|++++.+|..|+||||+|+..
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL-AKGADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHT-TTTCCTTCCCTTCCCTTHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCcccCCCCCCHHHHHHHC
Confidence 55677899999999877 889999999999999999999999999999999999 78999999999999999999999
Q ss_pred CChhhHHHHHhcCCccccccccccccccccc
Q 016470 99 RQLEIFELVIQMEVPMRRLVRKIDNGGNTLL 129 (389)
Q Consensus 99 g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpL 129 (389)
|+.+++++|+++|++ +|.++.+|.||-
T Consensus 86 ~~~~~~~~Ll~~ga~----~n~~~~~~~~~~ 112 (115)
T 2l6b_A 86 GHHEIVKLLDAKGAD----VNARSWGSSHHH 112 (115)
T ss_dssp TCHHHHHHHHTTSSS----HHHHSCCCC---
T ss_pred CCHHHHHHHHHcCCC----CCcCCccccccc
Confidence 999999999999999 999999999983
No 102
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=3.6e-19 Score=165.68 Aligned_cols=112 Identities=15% Similarity=0.207 Sum_probs=101.9
Q ss_pred chhhhhhhcCCCch---hhhhcCCCC------CCCcCCCCCHHHHHHHc---CCHHHHHHHHHHCCCcccccCCCCCcHH
Q 016470 25 KPKIHRYGANPNAS---SVDQKGIGE------SSAIDNAETPLFLATKS---GCIEIVKEIFNVYPQAVEHIDDEGRNIL 92 (389)
Q Consensus 25 ~~~Lh~a~~~~~~~---~Ll~~ga~~------n~~d~~G~tpLh~Aa~~---g~~~~v~~Ll~~~~~~~~~~d~~G~t~L 92 (389)
.++||.|+..++.+ .+++.|+++ +..|..|+||||+|+.. |+.+++++|+ ++|++++.+|.+|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll-~~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV-QNSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHH-HHCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHH-HCCCCccccCCCCCCHH
Confidence 34588899999887 678899995 44588999999999999 8999999999 77999999999999999
Q ss_pred HHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 93 HVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 93 h~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.+++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad----~~~~d~~g~tpL~~A~~~~~~~~v 254 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS----IEIANESGETPLDIAKRLKHEHCE 254 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC----CCCccCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999 999999999999999999887766
No 103
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=1.4e-18 Score=174.74 Aligned_cols=122 Identities=16% Similarity=0.060 Sum_probs=99.5
Q ss_pred HHHHHHHhCCCCCccccc---cccCCchhhhhhh---cCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRRDTSWEITDS---IQDQSKPKIHRYG---ANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~---~~~~~~~~Lh~a~---~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
++++.|+++|+++|.... ....+.||||.|+ ..|+.+ +|+++|+|+|.+|.+|+||||+|+..|+.+++++
T Consensus 146 ~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 146 LSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp HHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred HHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 689999999999987611 1256778899994 477766 8999999999999999999999999999999999
Q ss_pred HHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccc
Q 016470 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGI 134 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~ 134 (389)
|+ ++|++++.+|.+|+||||+|+..|+.+++++|+++|++ ++. ||+|.+..
T Consensus 226 Ll-~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~~~------~~~h~~~~ 276 (497)
T 3lvq_E 226 LL-KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG----TFA------FPLHVDYS 276 (497)
T ss_dssp HH-HTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----------------------
T ss_pred HH-HcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC----CCC------Ccceeecc
Confidence 99 88999999999999999999999999999999999998 655 57777654
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=1.9e-18 Score=160.84 Aligned_cols=122 Identities=11% Similarity=0.010 Sum_probs=104.9
Q ss_pred HHHHHHHhCCCCCccc---cccccCCchhhhhhhcC---CCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHH
Q 016470 2 ELARFLIRRDTSWEIT---DSIQDQSKPKIHRYGAN---PNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKE 72 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~---~~~~~~~~~~Lh~a~~~---~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~ 72 (389)
+.++.+++.|++++.. +...+.+.||||+|+.. ++.+ +|+++|+++|.+|.+|+||||+|+..|+.+++++
T Consensus 144 ~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~ 223 (278)
T 1dcq_A 144 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL 223 (278)
T ss_dssp HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 4678899999996633 12225677889999998 6655 8999999999999999999999999999999999
Q ss_pred HHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccC
Q 016470 73 IFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKR 136 (389)
Q Consensus 73 Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~ 136 (389)
|+ ++|++++.+|.+|+||||+|+..|+.+++++|+++|++ .+++|.++...
T Consensus 224 Ll-~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------~~~~~~~v~~~ 274 (278)
T 1dcq_A 224 LL-RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG------------RFNSHVHVEYE 274 (278)
T ss_dssp HH-HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT------------CCCSSCCCCCC
T ss_pred HH-HcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCCcceeeecc
Confidence 99 79999999999999999999999999999999998864 56777776543
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.74 E-value=5.1e-18 Score=163.90 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=100.3
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYP 78 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~ 78 (389)
++++.|+++|+++|..+.+ ..+.||||+|+..|+.+ +|+++|+++|.+|..|+||||+|+..|+.+++++|+ .+|
T Consensus 214 ~~v~~LL~~Gadvn~~~~~-~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL-~~G 291 (368)
T 3jue_A 214 PTMADALAHGADVNWVNGG-QDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFL-KRG 291 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTT-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTT
T ss_pred HHHHHHHHcCCCCCccccc-cCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHH-HCc
Confidence 6899999999999987743 34567799999999877 899999999999999999999999999999999999 789
Q ss_pred CcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCccccccccccccccccccccccc
Q 016470 79 QAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIK 135 (389)
Q Consensus 79 ~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~ 135 (389)
++++.+|.+|+||||+|+..|+.+++++|++.+.. .......+..+.|+++++...
T Consensus 292 ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~-~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 292 ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR-EAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-cccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999987654 223455667888999887654
No 106
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.74 E-value=7.9e-19 Score=152.65 Aligned_cols=114 Identities=20% Similarity=0.261 Sum_probs=98.2
Q ss_pred CcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccc-cccccc
Q 016470 50 AIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKID-NGGNTL 128 (389)
Q Consensus 50 ~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d-~~G~Tp 128 (389)
.|.+|.||||.|+..|+.++++.|+ . +.+++.+|.+|+||||+|+.+|+.+++++|+++|++ +|.+| .+|+||
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll-~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~g~tp 113 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLL-E-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----LDHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHT-T-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----TTCCCSSSSCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHH-h-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCcCCCCCCCCH
Confidence 3678999999999999999999999 4 889999999999999999999999999999999999 99998 899999
Q ss_pred cccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChHHHHHhhh
Q 016470 129 LHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPEELFATAN 188 (389)
Q Consensus 129 LhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~~l~~~~~ 188 (389)
||+|+..++.++++.+ ++ .....+.+|.+|+||++++.+..
T Consensus 114 L~~A~~~~~~~~v~~L------l~-------------~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 114 LHMAAGYVRPEVVEAL------VE-------------LGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp HHHHHHTTCHHHHHHH------HH-------------HTCCTTCCCTTSCCHHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHH------HH-------------cCCCCcCCCCCCCCHHHHHHHhc
Confidence 9999999887665221 11 11235688999999999998754
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=8.7e-19 Score=176.30 Aligned_cols=114 Identities=19% Similarity=0.230 Sum_probs=105.9
Q ss_pred hhhhhhhcCCCch---hhhhcCCCCCCC------cCCCCCHHHHHHH---cCCHHHHHHHHHHCCCcccccCCCCCcHHH
Q 016470 26 PKIHRYGANPNAS---SVDQKGIGESSA------IDNAETPLFLATK---SGCIEIVKEIFNVYPQAVEHIDDEGRNILH 93 (389)
Q Consensus 26 ~~Lh~a~~~~~~~---~Ll~~ga~~n~~------d~~G~tpLh~Aa~---~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh 93 (389)
..||.|+..|+.+ .|+++|+|+|.+ |..|.||||+|+. .|+.+++++|+ ++|+++|.+|.+|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll-~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFII-QNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHH-HHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHH-HcCCCCCccCCCCCcHHH
Confidence 4599999999987 889999999987 8899999999976 99999999999 789999999999999999
Q ss_pred HHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccC
Q 016470 94 VAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 94 ~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l 144 (389)
+|+.+|+.+++++|+++|++ ++.+|.+|+||||+|+..++.++++.+
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRAL----VGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCC----CSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999 999999999999999999988877443
No 108
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.73 E-value=1.7e-18 Score=154.97 Aligned_cols=108 Identities=10% Similarity=0.025 Sum_probs=94.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhc-CCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQK-GIGESSAIDNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~-ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
+++++|+++|+++|..+ ..+.||||+|+..|+.+ .|+++ |+++|.+|..|.||||+|+..|+.+++++|+ ++
T Consensus 87 ~~v~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll-~~ 162 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLD---KAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLL-AK 162 (222)
T ss_dssp HHHHHHHHTTCCTTCCC---TTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHH-HH
T ss_pred HHHHHHHhCCCCccccC---CCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-Hc
Confidence 78999999999999888 56778899999999877 78888 9999999999999999999999999999999 66
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVP 113 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~ 113 (389)
|++++.+|.+|+||||+|+..|+.++++.|++.++.
T Consensus 163 ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 163 GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp TCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 999999999999999999999999999999999887
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=1.2e-18 Score=139.36 Aligned_cols=109 Identities=23% Similarity=0.236 Sum_probs=92.1
Q ss_pred CCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccc
Q 016470 49 SAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTL 128 (389)
Q Consensus 49 ~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~Tp 128 (389)
.+|.+|+||||+|+..|+.++++.|+ +.+++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll-~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~d~~g~tp 78 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLL-SKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----VNARSKDGNTP 78 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHT-TTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC----TTCCCTTCCCT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC----CcccCCCCCCH
Confidence 47899999999999999999999999 78999999999999999999999999999999999999 99999999999
Q ss_pred cccccccCCCCccccCCCchhhhhHHhhHHHHHHhhccchhhhhcccCCCChH
Q 016470 129 LHMTGIKRSDYVPEKMEGPALVLQEELLWYERVEEVSMPHFRNHRNNMGFTPE 181 (389)
Q Consensus 129 LhlA~~~~~~~~~~~l~~~~~~l~~~l~~~~~v~~~~~~~~~~~~n~~g~tp~ 181 (389)
||+|+..++.++++.+.. .....+.++..|.+|.
T Consensus 79 l~~A~~~~~~~~~~~Ll~-------------------~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDA-------------------KGADVNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHT-------------------TSSSHHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHH-------------------cCCCCCcCCccccccc
Confidence 999999987766622211 1222566777787775
No 110
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.70 E-value=5.1e-18 Score=154.68 Aligned_cols=114 Identities=13% Similarity=0.105 Sum_probs=98.5
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCCCCCc-CCCCCHHHHHHHcCCHHHHHHHHHHC
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGESSAI-DNAETPLFLATKSGCIEIVKEIFNVY 77 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d-~~G~tpLh~Aa~~g~~~~v~~Ll~~~ 77 (389)
++++.|++ |+++|..| ..+.||||.|+..|+.+ +|+++|+++|.+| ..|.||||+|+..|+.+++++|+ .+
T Consensus 59 ~~v~~Ll~-~~~~~~~d---~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~ 133 (244)
T 3ui2_A 59 QALSQLLE-DRDVDAVD---ENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV-EL 133 (244)
T ss_dssp HHHHHTTT-TCCTTCBC---TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHH-HT
T ss_pred HHHHHHHc-CCCCCCcC---CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH-HC
Confidence 68999999 99999888 56778899999999877 8999999999998 78999999999999999999999 78
Q ss_pred CCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCcc
Q 016470 78 PQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVP 141 (389)
Q Consensus 78 ~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~ 141 (389)
|++++.+|.+|+||||+|+..++ +..|.||||+|+..++.+++
T Consensus 134 ga~~~~~d~~g~t~l~~A~~~~~---------------------~~~~~~~l~~a~~~g~~~iv 176 (244)
T 3ui2_A 134 GADIEVEDERGLTALELAREILK---------------------TTPKGNPMQFGRRIGLEKVI 176 (244)
T ss_dssp TCCTTCCCTTCCCHHHHHHHHHT---------------------TCCCSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCcHHHHHHHHHh---------------------ccCCCCHHHHHHHcChHHHH
Confidence 99999999999999999985221 23467788888877766555
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=4.8e-18 Score=135.25 Aligned_cols=90 Identities=20% Similarity=0.252 Sum_probs=78.2
Q ss_pred CCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccccccccc
Q 016470 47 ESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRKIDNGGN 126 (389)
Q Consensus 47 ~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~ 126 (389)
.+..|.+|.||||+|+..|+.+++++|+ +.+++++.+|..|+||||+|+.+|+.+++++|+++|++ ++.+|.+|+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll-~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~ 91 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILM-ANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD----VXAQDKFGK 91 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHH-HcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccccCCC
Confidence 3566888999999999999999999999 77899999999999999999999999999999999998 899999999
Q ss_pred cccccccccCCCCcc
Q 016470 127 TLLHMTGIKRSDYVP 141 (389)
Q Consensus 127 TpLhlA~~~~~~~~~ 141 (389)
||||+|+..++.+++
T Consensus 92 tpl~~A~~~~~~~~~ 106 (110)
T 2zgd_A 92 TAFDISIDNGNEDLA 106 (110)
T ss_dssp CHHHHHHHHTCHHHH
T ss_pred cHHHHHHHcCCHHHH
Confidence 999999998876655
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.65 E-value=4.3e-18 Score=164.94 Aligned_cols=129 Identities=7% Similarity=0.023 Sum_probs=83.1
Q ss_pred HHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCC---CCCcCCCCCHHHHHHHcCCHHHHHHHHH
Q 016470 2 ELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGE---SSAIDNAETPLFLATKSGCIEIVKEIFN 75 (389)
Q Consensus 2 eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~ 75 (389)
+++++++++|.+. .||||.|+..|+.+ .|+++|++. +..|..|.||||+|++.|+.++|++|+
T Consensus 80 ~~~~~l~~~g~~~----------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll- 148 (376)
T 2aja_A 80 QLWSDAHKKGIKS----------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC- 148 (376)
T ss_dssp THHHHHHHHTCCH----------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH-
T ss_pred HHHHHHHHcCCCc----------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH-
Confidence 3456666666542 25677777777766 667777622 233445667777777777777777777
Q ss_pred HCCCc---ccccCCCCCcHHHHHHHcCChhhHHHHHhcCCcccccccc--ccccccccccccc-ccCCCCccccCCC
Q 016470 76 VYPQA---VEHIDDEGRNILHVAIKYRQLEIFELVIQMEVPMRRLVRK--IDNGGNTLLHMTG-IKRSDYVPEKMEG 146 (389)
Q Consensus 76 ~~~~~---~~~~d~~G~t~Lh~A~~~g~~~iv~~Ll~~~~~~~~l~~~--~d~~G~TpLhlA~-~~~~~~~~~~l~~ 146 (389)
++|++ .+..+.+ +||||+|+.+|+.+++++|+++|++ ++. +|.+|+||||+|+ ..|+.++++.+..
T Consensus 149 ~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~----~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 149 ELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT----EATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG----GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred hCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc----cchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 55543 2222222 7777777777777777777777776 665 7777777777777 7777777765543
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.65 E-value=5.7e-18 Score=164.13 Aligned_cols=131 Identities=15% Similarity=0.048 Sum_probs=104.5
Q ss_pred CHHHHHHHhCCCCCccccccccCCchhhhhhhcCCCch---hhhhcCCCC---CCCcCCCCCHHHHHHHcCCHHHHHHHH
Q 016470 1 MELARFLIRRDTSWEITDSIQDQSKPKIHRYGANPNAS---SVDQKGIGE---SSAIDNAETPLFLATKSGCIEIVKEIF 74 (389)
Q Consensus 1 ~eiv~~Ll~~ga~vn~~~~~~~~~~~~Lh~a~~~~~~~---~Ll~~ga~~---n~~d~~G~tpLh~Aa~~g~~~~v~~Ll 74 (389)
+|++++|+++|+.....+.-...+.+|||.|+..|+.+ +|+++|+|+ +..+.+ .||||+|+..|+.+++++|+
T Consensus 105 ~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll 183 (376)
T 2aja_A 105 SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLC 183 (376)
T ss_dssp HHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHH
Confidence 37899999999832211111134456899999999987 899999863 333333 99999999999999999999
Q ss_pred HHCCCcccc--cCCCCCcHHHHHH-HcCChhhHHHHHhcCCcccccccccccccccccccccccCCCCccccC
Q 016470 75 NVYPQAVEH--IDDEGRNILHVAI-KYRQLEIFELVIQMEVPMRRLVRKIDNGGNTLLHMTGIKRSDYVPEKM 144 (389)
Q Consensus 75 ~~~~~~~~~--~d~~G~t~Lh~A~-~~g~~~iv~~Ll~~~~~~~~l~~~~d~~G~TpLhlA~~~~~~~~~~~l 144 (389)
++|++++. +|.+|+||||+|+ .+|+.+++++|+++|+ .|+||||+|+..|+.++++.+
T Consensus 184 -~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-----------~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 184 -ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-----------MLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp -HSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-----------HHHHHHHCTTTTTTTTHHHHH
T ss_pred -HcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-----------ccchHHHHHHHCCCHHHHHHH
Confidence 78889887 8999999999999 9999999999998653 289999999999999887443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.62 E-value=7.4e-16 Score=122.44 Aligned_cols=85 Identities=20% Similarity=0.295 Sum_probs=79.8
Q ss_pred cCCchhhhhhhcCCCch---hhhhcCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHHHCCCcccccCCCCCcHHHHHHHc
Q 016470 22 DQSKPKIHRYGANPNAS---SVDQKGIGESSAIDNAETPLFLATKSGCIEIVKEIFNVYPQAVEHIDDEGRNILHVAIKY 98 (389)
Q Consensus 22 ~~~~~~Lh~a~~~~~~~---~Ll~~ga~~n~~d~~G~tpLh~Aa~~g~~~~v~~Ll~~~~~~~~~~d~~G~t~Lh~A~~~ 98 (389)
..+.++||.|+..|+.+ .|+++|+++|.+|..|.||||+|+..|+.+++++|+ .+|++++.+|..|+||||+|+.+
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll-~~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLL-EAGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccccCCCcHHHHHHHc
Confidence 45667799999999987 789999999999999999999999999999999999 77999999999999999999999
Q ss_pred CChhhHHHH
Q 016470 99 RQLEIFELV 107 (389)
Q Consensus 99 g~~~iv~~L 107 (389)
|+.+++++|
T Consensus 101 ~~~~~~~~L 109 (110)
T 2zgd_A 101 GNEDLAEIL 109 (110)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHh
Confidence 999999986
Done!