BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016471
(389 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 125/199 (62%), Gaps = 2/199 (1%)
Query: 5 KLQHLFYSNSFLFFTRFC-EGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + C +GGEL D I+ R ++ E DA I++++L+ V + H +V
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++E+DA +K++DFGLS +++ + +G+AYY+APEVL + Y+ +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKC 218
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WSIGVI +ILL G PF +T+ I R V + F W +VS AKD ++++L
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278
Query: 184 DHRKRMTAAQALTHPWLHD 202
D ++R++A QAL HPW+ +
Sbjct: 279 DSQRRISAQQALEHPWIKE 297
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 121/199 (60%), Gaps = 4/199 (2%)
Query: 5 KLQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ +F + + + GGEL DRI+ +G Y E DA V++IL VA+ H G+V
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHENGIV 170
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHR-SYNVE 122
HRDLKPEN L+ T DAPLK+ DFGLS V + + G+ Y APE+L +Y E
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 123 GDMWSIGVITYILLCGSRPFW-ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLL 181
DMWS+G+ITYILLCG PF+ R + +FR +L + F W VS AKD VR+L+
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLI 290
Query: 182 NKDHRKRMTAAQALTHPWL 200
D +KR+T QAL HPW+
Sbjct: 291 VLDPKKRLTTFQALQHPWV 309
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F N+ ++ C GGEL +R++ + + E DA I++ +L+ VA+CH V
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVA 145
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPENFLF T D+PLK+IDFGL+ +P + + VG+ YYV+P+VL Y E
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 205
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WS GV+ Y+LLCG PF A T+ + + F + W +VSP+A+ +RRLL K
Sbjct: 206 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 265
Query: 184 DHRKRMTAAQALTHPWLHDENRPVPLDIL 212
++R+T+ QAL H W + P ++L
Sbjct: 266 SPKQRITSLQALEHEWFEKQLSSSPRNLL 294
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F N+ ++ C GGEL +R++ + + E DA I++ +L+ VA+CH V
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNVA 128
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPENFLF T D+PLK+IDFGL+ +P + + VG+ YYV+P+VL Y E
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPEC 188
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WS GV+ Y+LLCG PF A T+ + + F + W +VSP+A+ +RRLL K
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTK 248
Query: 184 DHRKRMTAAQALTHPWLHDENRPVPLDIL 212
++R+T+ QAL H W + P ++L
Sbjct: 249 SPKQRITSLQALEHEWFEKQLSSSPRNLL 277
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S+SF GGEL D I+ R R+ E DA I++++ + + + H +VHRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN 151
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVI 131
L ++E+D +K+IDFGLS + + ++ D +G+AYY+APEVL +Y+ + D+WS GVI
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVI 211
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
YILL G+ PF+ + E I + V F W ++S +AKD +R++L R+TA
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
Query: 192 AQALTHPWLHDENRPVP 208
Q L HPW+ + P
Sbjct: 272 TQCLEHPWIQKYSSETP 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L ++ S L+ + GGEL DRI+ +G Y E DA ++ ++L+ V + H G+VH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ + +ED+ + + DFGLS P L+ G+ YVAPEVL + Y+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVI YILLCG PF+ ++ +F +L+A+ F W +S AKDF+R L+ K
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 184 DHRKRMTAAQALTHPWL 200
D KR T QAL HPW+
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L ++ S L+ + GGEL DRI+ +G Y E DA ++ ++L+ V + H G+VH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ + +ED+ + + DFGLS P L+ G+ YVAPEVL + Y+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVI YILLCG PF+ ++ +F +L+A+ F W +S AKDF+R L+ K
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 184 DHRKRMTAAQALTHPWL 200
D KR T QAL HPW+
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L ++ S L+ + GGEL DRI+ +G Y E DA ++ ++L+ V + H G+VH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ + +ED+ + + DFGLS P L+ G+ YVAPEVL + Y+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVI YILLCG PF+ ++ +F +L+A+ F W +S AKDF+R L+ K
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 184 DHRKRMTAAQALTHPWL 200
D KR T QAL HPW+
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L ++ S L+ + GGEL DRI+ +G Y E DA ++ ++L+ V + H G+VH
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ + +ED+ + + DFGLS P L+ G+ YVAPEVL + Y+
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAV 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVI YILLCG PF+ ++ +F +L+A+ F W +S AKDF+R L+ K
Sbjct: 200 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 259
Query: 184 DHRKRMTAAQALTHPWL 200
D KR T QAL HPW+
Sbjct: 260 DPEKRFTCEQALQHPWI 276
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L+ ++ S + L+ + GGEL DRI+ +G Y E+DA T++ ++L+ V + H G+VH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKG-FYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ +++E++ + + DFGLS ++ G+ YVAPEVL + Y+
Sbjct: 144 RDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAV 203
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVI YILLCG PF+ +S +F +L+A+ F W +S AKDF+R L+ K
Sbjct: 204 DCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEK 263
Query: 184 DHRKRMTAAQALTHPWL 200
D KR T QA HPW+
Sbjct: 264 DPNKRYTCEQAARHPWI 280
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 89/208 (42%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L+ ++ S + + + GGEL DRIL RG Y E+DA +++++L+ V + H G+VH
Sbjct: 71 LEDIYESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGIVH 129
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
RDLKPEN L+ T EE++ + + DFGLS + + ++ G+ YVAPEVL + Y+
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKPYSKAV 188
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D WSIGVITYILLCG PF+ TES +F + F W +S AKDF+ LL K
Sbjct: 189 DCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEK 248
Query: 184 DHRKRMTAAQALTHPWLHDENRPVPLDI 211
D +R T +AL+HPW+ D N + DI
Sbjct: 249 DPNERYTCEKALSHPWI-DGNTALHRDI 275
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLF 74
F T F EGGEL ++I++R ++ E DA I+++IL+ + + H +VHRD+KPEN L
Sbjct: 121 FYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILL 179
Query: 75 TTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITYI 134
+ +K++DFGLS F D +L D +G+AYY+APEVL + YN + D+WS GVI YI
Sbjct: 180 ENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYI 239
Query: 135 LLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
LLCG PF + + I + V + F + W ++S EAK+ ++ +L D+ KR TA +A
Sbjct: 240 LLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299
Query: 195 LTHPWL 200
L W+
Sbjct: 300 LNSRWI 305
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 1/190 (0%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S+SF GGEL D I+ R R+ E DA I++++ + + + H +VHRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN 151
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVI 131
L ++E+D +K+IDFGLS + + ++ D +G+AYY+APEVL +Y+ + D+WS GVI
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVI 211
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
YILL G+ PF+ + E I + V F W ++S +AKD +R++L R+TA
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
Query: 192 AQALTHPWLH 201
Q L HPW+
Sbjct: 272 TQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 1/190 (0%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S+SF GGEL D I+ R R+ E DA I++++ + + + H +VHRDLKPEN
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN 151
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVI 131
L ++E+D +K+IDFGLS + + ++ D +G+AYY+APEVL +Y+ + D+WS GVI
Sbjct: 152 ILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVI 211
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
YILL G+ PF+ + E I + V F W ++S +AKD +R++L R+TA
Sbjct: 212 LYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITA 271
Query: 192 AQALTHPWLH 201
Q L HPW+
Sbjct: 272 TQCLEHPWIQ 281
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + + GGEL D I+SR R+ E DA I+ ++L+ + + H +V
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIV 148
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++ +DA +++IDFGLS +++ D +G+AYY+APEVLH +Y+ +
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKC 208
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WS GVI YILL G PF E I + V + F W VS AKD +R++L
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 268
Query: 184 DHRKRMTAAQALTHPWLH 201
R++A AL H W+
Sbjct: 269 VPSMRISARDALDHEWIQ 286
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + + GGEL D I+SR R+ E DA I+ ++L+ + + H +V
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIV 172
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++ +DA +++IDFGLS +++ D +G+AYY+APEVLH +Y+ +
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKC 232
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WS GVI YILL G PF E I + V + F W VS AKD +R++L
Sbjct: 233 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 292
Query: 184 DHRKRMTAAQALTHPWLH 201
R++A AL H W+
Sbjct: 293 VPSMRISARDALDHEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + + GGEL D I+SR R+ E DA I+ ++L+ + + H +V
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIV 171
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++ +DA +++IDFGLS +++ D +G+AYY+APEVLH +Y+ +
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKC 231
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WS GVI YILL G PF E I + V + F W VS AKD +R++L
Sbjct: 232 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 291
Query: 184 DHRKRMTAAQALTHPWLH 201
R++A AL H W+
Sbjct: 292 VPSMRISARDALDHEWIQ 309
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + + GGEL D I+SR R+ E DA I+ ++L+ + + H +V
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNKIV 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++ +DA +++IDFGLS +++ D +G+AYY+APEVLH +Y+ +
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKC 214
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WS GVI YILL G PF E I + V + F W VS AKD +R++L
Sbjct: 215 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTY 274
Query: 184 DHRKRMTAAQALTHPWLH 201
R++A AL H W+
Sbjct: 275 VPSMRISARDALDHEWIQ 292
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL D I+ R ++ E DA I++++L+ + H +VHRDLKPEN L ++ DA +
Sbjct: 88 GGELFDEIILRQ-KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 146
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCGSRPFW 143
K++DFGLS ++ + +G+AYY+APEVL + Y+ + D+WS GVI YILLCG PF
Sbjct: 147 KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFG 206
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+T+ I + V + +F W VS EAK V+ +L + KR++A +AL HPW+
Sbjct: 207 GQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 112/177 (63%), Gaps = 1/177 (0%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL D I+ R ++ E DA I++++L+ + H +VHRDLKPEN L ++ DA +
Sbjct: 105 GGELFDEIILRQ-KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALI 163
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCGSRPFW 143
K++DFGLS ++ + +G+AYY+APEVL + Y+ + D+WS GVI YILLCG PF
Sbjct: 164 KIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPFG 223
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+T+ I + V + +F W VS EAK V+ +L + KR++A +AL HPW+
Sbjct: 224 GQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + + GGEL D I+SR R+ E DA I+ ++L+ + + H +V
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYXHKNKIV 148
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
HRDLKPEN L ++ +DA +++IDFGLS ++ D +G+AYY+APEVLH +Y+ +
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKC 208
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
D+WS GVI YILL G PF E I + V + F W VS AKD +R+ L
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTY 268
Query: 184 DHRKRMTAAQALTHPWLH 201
R++A AL H W+
Sbjct: 269 VPSXRISARDALDHEWIQ 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL V CHL G+VHRDLKPEN L ++ + A +
Sbjct: 87 GGELFEDIVARE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 84 KVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRP 141
K+ DFGL+ V+ DQ+ G+ Y++PEVL + Y DMW+ GVI YILL G P
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
Query: 142 FWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
FW + +++ + +F W +V+PEAKD + ++L + KR+TA++AL HPW+
Sbjct: 206 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL V CHL G+VHRDLKPEN L ++ + A +
Sbjct: 87 GGELFEDIVARE-YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAV 145
Query: 84 KVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRP 141
K+ DFGL+ V+ DQ+ G+ Y++PEVL + Y DMW+ GVI YILL G P
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
Query: 142 FWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
FW + +++ + +F W +V+PEAKD + ++L + KR+TA++AL HPW+
Sbjct: 206 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 5/193 (2%)
Query: 11 YSNSFLFFTRFCEGGELLDRILS---RGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
Y N ++ CEGGELL+RI+S RG E ++++++N +A+ H Q VVH+DL
Sbjct: 92 YHNMYIVMET-CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGDMWS 127
KPEN LF +P+K+IDFGL++ + D+ + G+A Y+APEV R + D+WS
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWS 210
Query: 128 IGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRK 187
GV+ Y LL G PF + + + +PN+ P ++P+A D ++++L KD +
Sbjct: 211 AGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPER 269
Query: 188 RMTAAQALTHPWL 200
R +AAQ L H W
Sbjct: 270 RPSAAQVLHHEWF 282
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 4/191 (2%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ +L F GGEL + I++R Y E DA +++IL V CH GVVHRDLKPEN
Sbjct: 94 GHHYLIFD-LVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPEN 151
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRS-YNVEGDMWSIG 129
L ++ + A +K+ DFGL+ V +Q+ G+ Y++PEVL + Y D+W+ G
Sbjct: 152 LLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
VI YILL G PFW + +++ + +F W +V+PEAKD + ++L + KR+
Sbjct: 212 VILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 271
Query: 190 TAAQALTHPWL 200
TAA+AL HPW+
Sbjct: 272 TAAEALKHPWI 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 110/179 (61%), Gaps = 3/179 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL V CH GVVHRDLKPEN L ++ + A +
Sbjct: 87 GGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAV 145
Query: 84 KVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCGSRP 141
K+ DFGL+ V+ DQ+ G+ Y++PEVL + +Y D+W+ GVI YILL G P
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
Query: 142 FWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
FW + +++ + +F W +V+PEAK+ + ++L + KR+TA +AL HPW+
Sbjct: 206 FWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL V CH GVVHR+LKPEN L ++ + A +
Sbjct: 94 GGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAV 152
Query: 84 KVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRP 141
K+ DFGL+ V +Q+ G+ Y++PEVL + Y D+W+ GVI YILL G P
Sbjct: 153 KLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
Query: 142 FWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
FW + +++ + +F W +V+PEAKD + ++L + KR+TAA+AL HPW+
Sbjct: 213 FWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 15 FLFFTRFCEGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFL 73
L EGGEL RI RG + + E +A I+ I + F H + HRD+KPEN L
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 74 FTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVIT 132
+T++E+DA LK+ DFG + + L + YYVAPEVL Y+ DMWS+GVI
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNA-LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 133 YILLCGSRPFWART----ESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR 188
YILLCG PF++ T G+ R + F + W VS +AK +R LL D +R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279
Query: 189 MTAAQALTHPWLH 201
+T Q + HPW++
Sbjct: 280 LTITQFMNHPWIN 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 15 FLFFTRFCEGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFL 73
L EGGEL RI RG + + E +A I+ I + F H + HRD+KPEN L
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 74 FTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVIT 132
+T++E+DA LK+ DFG + + L + YYVAPEVL Y+ DMWS+GVI
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNA-LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 133 YILLCGSRPFWART----ESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR 188
YILLCG PF++ T G+ R + F + W VS +AK +R LL D +R
Sbjct: 201 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 260
Query: 189 MTAAQALTHPWLH 201
+T Q + HPW++
Sbjct: 261 LTITQFMNHPWIN 273
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
N + F GGEL +++ + E++A + ++ + H VH DLKPEN
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 286
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVI 131
+FTT+ + LK+IDFGL+ + P Q + G+A + APEV + DMWS+GV+
Sbjct: 287 MFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
+YILL G PF + R+V D N DS + +S + KDF+R+LL D RMT
Sbjct: 346 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 405
Query: 192 AQALTHPWLHDENRP 206
QAL HPWL N P
Sbjct: 406 HQALEHPWLTPGNAP 420
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 105/195 (53%), Gaps = 2/195 (1%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
N + F GGEL +++ + E++A + ++ + H VH DLKPEN
Sbjct: 121 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 180
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVI 131
+FTT+ + LK+IDFGL+ + P Q + G+A + APEV + DMWS+GV+
Sbjct: 181 MFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
+YILL G PF + R+V D N DS + +S + KDF+R+LL D RMT
Sbjct: 240 SYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 299
Query: 192 AQALTHPWLHDENRP 206
QAL HPWL N P
Sbjct: 300 HQALEHPWLTPGNAP 314
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILIGELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 79 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 197
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 198 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 258 DPKKRMTIQDSLQHPWI 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 80 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 198
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 199 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 259 DPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L+ EE+A +++ILN V + H + H
Sbjct: 79 HEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + R P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEA 197
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ +V + F D + + S AKDF+RRLL K
Sbjct: 198 DMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVK 257
Query: 184 DHRKRMTAAQALTHPWL 200
D +KRMT +L HPW+
Sbjct: 258 DPKKRMTIQDSLQHPWI 274
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 2/183 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL +A+CH G+VHR+LKPEN L ++ + A +
Sbjct: 112 GGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 170
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF 142
K+ DFGL+ V + + G+ Y++PEVL + Y+ D+W+ GVI YILL G PF
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
Query: 143 WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
W + ++ + ++ W +V+PEAK + +L + +KR+TA QAL PW+ +
Sbjct: 231 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290
Query: 203 ENR 205
R
Sbjct: 291 RER 293
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 2/183 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL +A+CH G+VHR+LKPEN L ++ + A +
Sbjct: 89 GGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 147
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF 142
K+ DFGL+ V + + G+ Y++PEVL + Y+ D+W+ GVI YILL G PF
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Query: 143 WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
W + ++ + ++ W +V+PEAK + +L + +KR+TA QAL PW+ +
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267
Query: 203 ENR 205
R
Sbjct: 268 RER 270
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 109/183 (59%), Gaps = 2/183 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL +A+CH G+VHR+LKPEN L ++ + A +
Sbjct: 88 GGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 146
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF 142
K+ DFGL+ V + + G+ Y++PEVL + Y+ D+W+ GVI YILL G PF
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
Query: 143 WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
W + ++ + ++ W +V+PEAK + +L + +KR+TA QAL PW+ +
Sbjct: 207 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 266
Query: 203 ENR 205
R
Sbjct: 267 RER 269
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 2/178 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA +++IL +A+CH G+VHR+LKPEN L ++ + A +
Sbjct: 89 GGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 147
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF 142
K+ DFGL+ V + + G+ Y++PEVL + Y+ D+W+ GVI YILL G PF
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
Query: 143 WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
W + ++ + ++ W +V+PEAK + +L + +KR+TA QAL PW+
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 137
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 138 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 197
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 198 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 257
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQDED 282
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 85 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 143
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 144 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 203
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 204 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 263
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 264 LLVVDPKARFTTEEALRHPWLQDED 288
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 78 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 136
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 137 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 196
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 197 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 256
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 257 LLVVDPKARFTTEEALRHPWLQDED 281
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 218 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 276
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 277 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 336
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 337 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 396
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 397 LLVVDPKARFTTEEALRHPWLQDED 421
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 6/205 (2%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
K+++ F + + EGGEL D+++ R E K ++L V + H G++H
Sbjct: 204 KIKNFFDAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGIIH 262
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----HRSYN 120
RDLKPEN L +++EED +K+ DFG S + + + G+ Y+APEVL YN
Sbjct: 263 RDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYN 322
Query: 121 VEGDMWSIGVITYILLCGSRPFWA-RTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI +I L G PF RT+ + + NF W VS +A D V++
Sbjct: 323 RAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK 382
Query: 180 LLNKDHRKRMTAAQALTHPWLHDEN 204
LL D + R T +AL HPWL DE+
Sbjct: 383 LLVVDPKARFTTEEALRHPWLQDED 407
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 111/197 (56%), Gaps = 5/197 (2%)
Query: 8 HLFYSN--SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
H Y N + GGEL D L++ EE+A + +++IL+ V + H + + H
Sbjct: 81 HDVYENRTDVVLILELVSGGELFD-FLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 66 DLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKPEN + + P +K+IDFGL+ + +I G+ +VAPE++ + +E
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMWSIGVITYILL G+ PF T+ ++ +F + + S AKDF+R+LL K
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVK 259
Query: 184 DHRKRMTAAQALTHPWL 200
+ RKR+T +AL HPW+
Sbjct: 260 ETRKRLTIQEALRHPWI 276
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 6/205 (2%)
Query: 1 MYHQKLQHLF--YSNSF--LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAF 56
++H KL +L + + + + F GGEL DRI + + E + + + +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH 116
H +VH D+KPEN + T++ + +K+IDFGL+ + PD+ + +A + APE++
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVD 223
Query: 117 RS-YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
R DMW+IGV+ Y+LL G PF + ++V R D F + + SVSPEAKD
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 176 FVRRLLNKDHRKRMTAAQALTHPWL 200
F++ LL K+ RKR+T AL HPWL
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + + YYVAPEVL Y+
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 3/182 (1%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
GGEL D L+ E++A +++IL+ V + H + + H DLKPEN + +
Sbjct: 89 LVSGGELFD-FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 147
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSIGVITYILLCG 138
P +K+IDFG++ + +I G+ +VAPE++ + +E DMWSIGVITYILL G
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ PF T+ ++ + +F + + + S AKDF+RRLL KD ++RMT AQ+L H
Sbjct: 208 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS 267
Query: 199 WL 200
W+
Sbjct: 268 WI 269
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL + I++R Y E DA + +IL V H +VHRDLKPEN L ++ + A +
Sbjct: 114 GGELFEDIVARE-YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAV 172
Query: 84 KVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRP 141
K+ DFGL+ V+ +Q+ G+ Y++PEVL + Y D+W+ GVI YILL G P
Sbjct: 173 KLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
Query: 142 FWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
FW + +++ + +F W +V+PEAK+ + ++L + KR+TA QAL HPW+
Sbjct: 233 FWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 304
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 305 LLKTEPTQRMTITEFMNHPWIMQSTK 330
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 310
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 311 LLKTEPTQRMTITEFMNHPWIMQSTK 336
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 85 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 264
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 265 LLKTEPTQRMTITEFMNHPWIMQSTK 290
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 86 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 265
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 266 LLKTEPTQRMTITEFMNHPWIMQSTK 291
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTK 284
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 80 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 259
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 260 LLKTEPTQRMTITEFMNHPWIMQSTK 285
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 87 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 266
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 267 LLKTEPTQRMTITEFMNHPWIMQSTK 292
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 95 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 274
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 275 LLKTEPTQRMTITEFMNHPWIMQSTK 300
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
DMWS+GVI YILLCG PF++ G+ + F + W VS E K +R
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +RMT + + HPW+ +
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTK 286
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
+ S+SF+F GEL D L+ E++ ++I+ +L V+F H +VHRDLK
Sbjct: 169 YESSSFMFLVFDLMRKGELFD-YLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLK 227
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-------HRSYNV 121
PEN L +++ +++ DFG S + P ++L ++ G+ Y+APE+L H Y
Sbjct: 228 PENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGK 284
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLL 181
E D+W+ GVI + LL GS PFW R + + R ++ F W S KD + RLL
Sbjct: 285 EVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLL 344
Query: 182 NKDHRKRMTAAQALTHPWL 200
D R+TA QAL HP+
Sbjct: 345 QVDPEARLTAEQALQHPFF 363
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 12/205 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L+ + +N+F F + GEL D L+ E++ + I+ +L ++ H +V
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKETRKIMRALLEVICALHKLNIV 133
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-------H 116
HRDLKPEN L ++D +K+ DFG S + P ++L ++ G+ Y+APE++ H
Sbjct: 134 HRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 190
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E DMWS GVI Y LL GS PFW R + + R ++ + F W S KD
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 250
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH 201
V R L +KR TA +AL HP+
Sbjct: 251 VSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
GGEL D L+ E++A +++IL+ V + H + + H DLKPEN + +
Sbjct: 96 LVSGGELFD-FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 154
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSIGVITYILLCG 138
P +K+IDFG++ + +I G+ +VAPE++ + +E DMWSIGVITYILL G
Sbjct: 155 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ PF T+ ++ + +F + + + S AKDF+RRLL KD ++RM AQ+L H
Sbjct: 215 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 274
Query: 199 WL 200
W+
Sbjct: 275 WI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
GGEL D L+ E++A +++IL+ V + H + + H DLKPEN + +
Sbjct: 110 LVSGGELFD-FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 168
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSIGVITYILLCG 138
P +K+IDFG++ + +I G+ +VAPE++ + +E DMWSIGVITYILL G
Sbjct: 169 NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ PF T+ ++ + +F + + + S AKDF+RRLL KD ++RM AQ+L H
Sbjct: 229 ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHS 288
Query: 199 WL 200
W+
Sbjct: 289 WI 290
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 108/205 (52%), Gaps = 12/205 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L+ + +N+F F + GEL D L+ E++ + I+ +L ++ H +V
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-------H 116
HRDLKPEN L ++D +K+ DFG S + P ++L ++ G+ Y+APE++ H
Sbjct: 147 HRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNH 203
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E DMWS GVI Y LL GS PFW R + + R ++ + F W S KD
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 263
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH 201
V R L +KR TA +AL HP+
Sbjct: 264 VSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 12/205 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L+ + +N+F F + GEL D L+ E++ + I+ +L ++ H +V
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFD-YLTEKVTLSEKETRKIMRALLEVICALHKLNIV 146
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-------H 116
HRDLKPEN L ++D +K+ DFG S + P ++L + G+ Y+APE++ H
Sbjct: 147 HRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNH 203
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E DMWS GVI Y LL GS PFW R + + R ++ + F W S KD
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDL 263
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH 201
V R L +KR TA +AL HP+
Sbjct: 264 VSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 121/217 (55%), Gaps = 23/217 (10%)
Query: 3 HQKLQHLFY----SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
HQ + L++ +N +C GGEL D I+S+ R EE+ + + +I++ VA+ H
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH 125
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP----DQRLNDIVGSAYYVAPEV 114
QG HRDLKPEN LF +E LK+IDFGL +P D L GS Y APE+
Sbjct: 126 SQGYAHRDLKPENLLF---DEYHKLKLIDFGLC--AKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 115 LH-RSY-NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP-WPSVSP 171
+ +SY E D+WS+G++ Y+L+CG PF +++ ++R +D P W +SP
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK---YDVPKW--LSP 235
Query: 172 EAKDFVRRLLNKDHRKRMTAAQALTHPW-LHDENRPV 207
+ ++++L D +KR++ L HPW + D N PV
Sbjct: 236 SSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPV 272
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL +F+ F GGEL +RI + + E +A I+ K+++ V+ H GVV
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHRS-YNV 121
HRDLKPEN LFT ++ +K+IDFG + PD Q L + +Y APE+L+++ Y+
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDE 188
Query: 122 EGDMWSIGVITYILLCGSRPFWARTES-------GIFRSVLRADPNFHDSPWPSVSPEAK 174
D+WS+GVI Y +L G PF + S I + + + D +F W +VS EAK
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAK 248
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHD 202
D ++ LL D KR+ + + WL D
Sbjct: 249 DLIQGLLTVDPNKRLKMSGLRYNEWLQD 276
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 2/191 (1%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
N + + +GGEL DRI+ E D +++I + H ++H DLKPEN
Sbjct: 159 NDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENI 218
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY-NVEGDMWSIGVI 131
L R+ +K+IDFGL+ +P ++L G+ ++APEV++ + + DMWS+GVI
Sbjct: 219 LCVNRDA-KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
Query: 132 TYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
Y+LL G PF ++ ++L + D + +S EAK+F+ +LL K+ R++A
Sbjct: 278 AYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA 337
Query: 192 AQALTHPWLHD 202
++AL HPWL D
Sbjct: 338 SEALKHPWLSD 348
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 112/207 (54%), Gaps = 7/207 (3%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSR---GGRYLEEDAKTIVEKILNIVAFCHLQ 60
+L + S+ L+ F +G +L I+ R G Y E A + +IL + +CH
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHRS- 118
++HRD+KPEN L ++E AP+K+ DFG++ VG+ +++APEV+ R
Sbjct: 150 NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVR 178
Y D+W GVI +ILL G PF+ T+ +F +++ + W +S AKD VR
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVR 268
Query: 179 RLLNKDHRKRMTAAQALTHPWLHDENR 205
R+L D +R+T +AL HPWL + +R
Sbjct: 269 RMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H+ + HL S + F G ++ +RI + E + + V ++ + F H
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHR 117
+ H D++PEN ++ TR + +K+I+FG + ++P + + Y APEV H
Sbjct: 120 SHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 118 SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFV 177
+ DMWS+G + Y+LL G PF A T I +++ A+ F + + +S EA DFV
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238
Query: 178 RRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDIL 212
RLL K+ + RMTA++AL HPWL + V ++
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQKIERVSTKVI 273
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I + I + + H + H
Sbjct: 125 ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEG 123
RD+KPEN L+T++ +A LK+ DFG + L + YYVAPEVL Y+
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 124 DMWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D WS+GVI YILLCG PF++ G + F + W VS E K +R
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRN 304
Query: 180 LLNKDHRKRMTAAQALTHPWLHDENR 205
LL + +R T + HPW+ +
Sbjct: 305 LLKTEPTQRXTITEFXNHPWIXQSTK 330
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 31/218 (14%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLF 74
+L F + +GG +L I + + E +A +V + + F H +G+ HRDLKPEN L
Sbjct: 87 YLVFEKL-QGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILC 144
Query: 75 TTREEDAPLKVIDFGLSDFVRPDQRLNDIV--------GSAYYVAPEVLH------RSYN 120
+ E+ +P+K+ DF L ++ + I GSA Y+APEV+ Y+
Sbjct: 145 ESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYD 204
Query: 121 VEGDMWSIGVITYILLCGSRPF---------WARTE------SGIFRSVLRADPNFHDSP 165
D+WS+GV+ YI+L G PF W R E + +F S+ F D
Sbjct: 205 KRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD 264
Query: 166 WPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDE 203
W +S EAKD + +LL +D ++R++AAQ L HPW+ +
Sbjct: 265 WAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQGQ 302
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 116/229 (50%), Gaps = 37/229 (16%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEE-DAKTIVEKILNIVAFCHLQGVVHRDLKPENFL 73
+L F + GG +L I R R+ E +A +V+ + + + F H +G+ HRDLKPEN L
Sbjct: 87 YLVFEKM-RGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 74 FTTREEDAPLKVIDFGLSDFVRPDQRLNDI--------VGSAYYVAPEVLH------RSY 119
+ +P+K+ DFGL ++ + + I GSA Y+APEV+ Y
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 120 NVEGDMWSIGVITYILLCGSRPF---------WARTESG------IFRSVLRADPNFHDS 164
+ D+WS+GVI YILL G PF W R E+ +F S+ F D
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 165 PWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLH----DENRPVPL 209
W +S AKD + +LL +D ++R++AAQ L HPW+ + P P+
Sbjct: 264 DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPM 312
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 120 bits (302), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 37/229 (16%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEE-DAKTIVEKILNIVAFCHLQGVVHRDLKPENFL 73
+L F + GG +L I R R+ E +A +V+ + + + F H +G+ HRDLKPEN L
Sbjct: 87 YLVFEKM-RGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 74 FTTREEDAPLKVIDFGLSDFVRPDQRLNDI--------VGSAYYVAPEVLH------RSY 119
+ +P+K+ DF L ++ + + I GSA Y+APEV+ Y
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 120 NVEGDMWSIGVITYILLCGSRPF---------WARTESG------IFRSVLRADPNFHDS 164
+ D+WS+GVI YILL G PF W R E+ +F S+ F D
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 165 PWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLH----DENRPVPL 209
W +S AKD + +LL +D ++R++AAQ L HPW+ + P P+
Sbjct: 264 DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPM 312
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 11/217 (5%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T GGELLD+IL R + E +A ++ I V + H QGVVHRDLKP N L+
Sbjct: 98 LVTELMRGGELLDKIL-RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVD 156
Query: 77 REEDAP-LKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRSYNVEG-DMWSIGVITY 133
+ L++ DFG + +R + L +A +VAPEVL R EG D+WS+G++ Y
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLY 216
Query: 134 ILLCGSRPFW---ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
+L G PF + T I + W +VS AKD V ++L+ D +R+T
Sbjct: 217 TMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT 276
Query: 191 AAQALTHPWLHDENRPVPLDILIY---KLVKSYLRAT 224
A Q L HPW+ +++ +P L + +LVK + AT
Sbjct: 277 AKQVLQHPWVTQKDK-LPQSQLSHQDLQLVKGAMAAT 312
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 13/218 (5%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T GGELLD+IL R + E +A ++ I V + H QGVVHRDLKP N L+
Sbjct: 98 LVTELMRGGELLDKIL-RQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVD 156
Query: 77 REEDAP--LKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHRSYNVEG-DMWSIGVIT 132
E P L++ DFG + +R + L +A +VAPEVL R EG D+WS+G++
Sbjct: 157 -ESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 133 YILLCGSRPFW---ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
Y +L G PF + T I + W +VS AKD V ++L+ D +R+
Sbjct: 216 YTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRL 275
Query: 190 TAAQALTHPWLHDENRPVPLDILIY---KLVKSYLRAT 224
TA Q L HPW+ +++ +P L + +LVK + AT
Sbjct: 276 TAKQVLQHPWVTQKDK-LPQSQLSHQDLQLVKGAMAAT 312
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSR---GGRYLEEDAKTIVEKILNIVAFCHLQ 60
+L + S+ L+ F +G +L I+ R G Y E A + +IL + +CH
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHRS- 118
++HRD+KP L ++E AP+K+ FG++ VG+ +++APEV+ R
Sbjct: 152 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 211
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVR 178
Y D+W GVI +ILL G PF+ T+ +F +++ + W +S AKD VR
Sbjct: 212 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVR 270
Query: 179 RLLNKDHRKRMTAAQALTHPWLHDENR 205
R+L D +R+T +AL HPWL + +R
Sbjct: 271 RMLMLDPAERITVYEALNHPWLKERDR 297
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 7/207 (3%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSR---GGRYLEEDAKTIVEKILNIVAFCHLQ 60
+L + S+ L+ F +G +L I+ R G Y E A + +IL + +CH
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHRS- 118
++HRD+KP L ++E AP+K+ FG++ VG+ +++APEV+ R
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP 209
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVR 178
Y D+W GVI +ILL G PF+ T+ +F +++ + W +S AKD VR
Sbjct: 210 YGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVR 268
Query: 179 RLLNKDHRKRMTAAQALTHPWLHDENR 205
R+L D +R+T +AL HPWL + +R
Sbjct: 269 RMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 23/196 (11%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T +GGELLD+IL R + E +A ++ I V + H QGVVHRDLKP N L+
Sbjct: 95 TELMKGGELLDKIL-RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 79 EDA-PLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYIL 135
+ +++ DFG + +R + L +A +VAPEVL R Y+ D+WS+GV+ Y +
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTM 213
Query: 136 LCGSRPF-----------WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKD 184
L G PF AR SG F + W SVS AKD V ++L+ D
Sbjct: 214 LTGYTPFANGPDDTPEEILARIGSGKF--------SLSGGYWNSVSDTAKDLVSKMLHVD 265
Query: 185 HRKRMTAAQALTHPWL 200
+R+TAA L HPW+
Sbjct: 266 PHQRLTAALVLRHPWI 281
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 24/210 (11%)
Query: 6 LQHLFYSNSFLFF-TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L+ ++ +++ T +GGELLD+IL R + E +A ++ I V + H QGVVH
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKIL-RQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 65 RDLKPENFLFTTREEDA-PLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SYNV 121
RDLKP N L+ + +++ DFG + +R + L +A +VAPEVL R Y+
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDA 199
Query: 122 EGDMWSIGVITYILLCGSRPF-----------WARTESGIFRSVLRADPNFHDSPWPSVS 170
D+WS+GV+ Y L G PF AR SG F + W SVS
Sbjct: 200 ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF--------SLSGGYWNSVS 251
Query: 171 PEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
AKD V + L+ D +R+TAA L HPW+
Sbjct: 252 DTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 26/205 (12%)
Query: 7 QHLFYSNSFLFFTRFC-EGGELLDRILSRGGR-YLEEDAKTIVEKILNIVAFCHLQGVVH 64
++L+ L C +GGEL RI RG + + E +A I++ I + + H + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEGD 124
RD+KPEN L+T++ +A LK+ DFG A E Y+ D
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEKYDKSCD 180
Query: 125 MWSIGVITYILLCGSRPFWAR----TESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRL 180
MWS+GVI YILLCG PF++ G+ + F + W VS E K +R L
Sbjct: 181 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 240
Query: 181 LNKDHRKRMTAAQALTHPWLHDENR 205
L + +RMT + + HPW+ +
Sbjct: 241 LKTEPTQRMTITEFMNHPWIMQSTK 265
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 8 HLFYSNS--FLFFTRFCEGGELLDRILSRGGRYLEE-DAKTIVEKILNIVAFCHLQGVVH 64
H Y N+ + + GGE+ L + E D ++++IL V + H +VH
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEG 123
DLKP+N L ++ +K++DFG+S + L +I+G+ Y+APE+L +
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTAT 214
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
DMW+IG+I Y+LL + PF + ++ + + ++ + + SVS A DF++ LL K
Sbjct: 215 DMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVK 274
Query: 184 DHRKRMTAAQALTHPWLH 201
+ KR TA L+H WL
Sbjct: 275 NPEKRPTAEICLSHSWLQ 292
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 98/169 (57%), Gaps = 9/169 (5%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQ 98
E+ I+ +I + + + H QG+ HRD+KPENFLF+T + +K++DFGLS +F + +
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK-SFEIKLVDFGLSKEFYKLNN 225
Query: 99 R----LNDIVGSAYYVAPEVLH---RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIF 151
+ G+ Y+VAPEVL+ SY + D WS GV+ ++LL G+ PF ++
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 152 RSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
VL F + + +SP A+D + LLN++ +R A +AL HPW+
Sbjct: 286 SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 24/209 (11%)
Query: 18 FTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTR 77
F +GG L D I+S+ R EE T+ E +L +A+ H QGV+HRD+K ++ L T
Sbjct: 120 LMEFLQGGALTD-IVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL- 176
Query: 78 EEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYIL 135
D +K+ DFG + D + +VG+ Y++APEV+ RS Y E D+WS+G++ +
Sbjct: 177 --DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 136 LCGSRPFWARTESGIFRSVLRADPNFHDSPWP------SVSPEAKDFVRRLLNKDHRKRM 189
+ G P+++ S ++A DSP P VSP +DF+ R+L +D ++R
Sbjct: 235 VDGEPPYFS-------DSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 287
Query: 190 TAAQALTHPWLHDENRP---VPLDILIYK 215
TA + L HP+L P VPL I +Y+
Sbjct: 288 TAQELLDHPFLLQTGLPECLVPL-IQLYR 315
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + R+ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFG 157
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 158 WSVHA-PSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+R + R + F D V+ A+D + RLL + +R+T A+ L HPW+
Sbjct: 217 ETYRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 96/172 (55%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + R+ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFG 157
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 158 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+R + R + F D V+ A+D + RLL + +R+T A+ L HPW+
Sbjct: 217 ETYRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 179
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R +D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 180 WSVHA-PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 239 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 154
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 155 WSVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 214 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R +D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL + + S +F + GGEL D I + GR E++++ + ++IL+ V +CH VV
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHMVV 138
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSY-NV 121
HRDLKPEN L K+ DFGLS+ + + L GS Y APEV+ R Y
Sbjct: 139 HRDLKPENVLLDAHMN---AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLL 181
E D+WS GVI Y LLCG+ PF +F+ + D F+ + ++P ++ +L
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKI--CDGIFYTPQY--LNPSVISLLKHML 251
Query: 182 NKDHRKRMTAAQALTHPWL 200
D KR T H W
Sbjct: 252 QVDPMKRATIKDIREHEWF 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 158
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 159 WSVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 218 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R D+ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 16/183 (8%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GGEL D I+ + R E++ + ++I+ + +CH +VHRDLKPEN L +++ +
Sbjct: 92 GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNV 147
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY--NVEGDMWSIGVITYILLCGSRP 141
K+ DFGLS+ + L GS Y APEV++ E D+WS G++ Y++L G P
Sbjct: 148 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
Query: 142 FWARTESGIFRSV---LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F +F+ V + P+F +SP A+ +RR++ D +R+T + P
Sbjct: 208 FDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLIRRMIVADPMQRITIQEIRRDP 260
Query: 199 WLH 201
W +
Sbjct: 261 WFN 263
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 152 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 208
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 264
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 265 LLVLDATKRL 274
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF +++ + +F + + P+A+D V +
Sbjct: 212 XKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 156 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 212
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 268
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 269 LLVLDATKRL 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 151
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 152 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 208
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 209 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 264
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 265 LLVLDATKRL 274
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 153 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 265
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 266 LLVLDATKRL 275
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 13/194 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 136
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 137 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 193
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 194 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 249
Query: 180 LLNKDHRKRMTAAQ 193
LL D KR+ +
Sbjct: 250 LLVLDATKRLGCEE 263
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 153 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 265
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 266 LLVLDATKRL 275
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 153 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 209
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 265
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 266 LLVLDATKRL 275
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 105/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF +++ + +F + + P+A+D V +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 152
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 153 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 210 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 265
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 266 LLVLDATKRL 275
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 159
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 160 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 272
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 273 LLVLDATKRL 282
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 212 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 155
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 156 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 212
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 213 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 268
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 269 LLVLDATKRL 278
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 13/194 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 129
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 130 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 186
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 187 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 242
Query: 180 LLNKDHRKRMTAAQ 193
LL D KR+ +
Sbjct: 243 LLVLDATKRLGCEE 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 130
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 131 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 187
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 243
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 244 LLVLDATKRL 253
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R ++ G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 132
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 133 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 189
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 190 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 245
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 246 LLVLDATKRL 255
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 13/194 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 131
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 132 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 188
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 189 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 244
Query: 180 LLNKDHRKRMTAAQ 193
LL D KR+ +
Sbjct: 245 LLVLDATKRLGCEE 258
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + GELL + + + G + E + +I++ + + H +G++
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 157
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 158 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 214
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 215 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF----PKARDLVEK 270
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 271 LLVLDATKRL 280
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 154
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 155 WSVHA-PSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 214 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 179
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 180 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 239 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 114 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 170
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 171 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 230 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 158
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 159 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 218 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 96 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 152
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 153 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 212 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL +RI + GR+ E++A+ +++++ V++CH V HRDLK EN L
Sbjct: 95 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-- 151
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE-GDMWSIGVITYILLC 137
AP LK+ DFG S + VG+ Y+APEV L + Y+ + D+WS GV Y++L
Sbjct: 152 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 211
Query: 138 GSRPFWARTESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
G+ PF E FR + N + + +SPE + + R+ D KR++ +
Sbjct: 212 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 271
Query: 196 THPWL 200
H W
Sbjct: 272 NHEWF 276
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 154
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 155 WSCHA-PSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 214 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 94 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 150
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 151 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 210 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 101 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 157
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 158 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 216
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 217 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL F + L+F + + G LL + + + G + E + +I++ + + H +G++
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLL-KYIRKIGSFDETCTRFYTAEIVSALEYLHGKGII 154
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPEVL-HRSY 119
HRDLKPEN L ED +++ DFG + + P+ R N VG+A YV+PE+L +S
Sbjct: 155 HRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 211
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
+ D+W++G I Y L+ G PF A E IF+ +++ + +F + + P+A+D V +
Sbjct: 212 SKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF----PKARDLVEK 267
Query: 180 LLNKDHRKRM 189
LL D KR+
Sbjct: 268 LLVLDATKRL 277
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 DTYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 158
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE + R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 159 WSVHA-PSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 218 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 99 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 155
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 156 WSVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 215 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL +RI + GR+ E++A+ +++++ V++CH V HRDLK EN L
Sbjct: 96 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-- 152
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE-GDMWSIGVITYILLC 137
AP LK+ DFG S + VG+ Y+APEV L + Y+ + D+WS GV Y++L
Sbjct: 153 APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 138 GSRPFWARTESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
G+ PF E FR + N + + +SPE + + R+ D KR++ +
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 196 THPWL 200
H W
Sbjct: 273 NHEWF 277
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 32 LSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS 91
L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 160
Query: 92 DFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTESGI 150
P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 161 VHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 151 FRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFG 153
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 154 WSVHA-PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 213 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL +RI + GR+ E++A+ +++++ V++CH V HRDLK EN L
Sbjct: 96 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-- 152
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE-GDMWSIGVITYILLC 137
AP LK+ FG S + D VG+ Y+APEV L + Y+ + D+WS GV Y++L
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 138 GSRPFWARTESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
G+ PF E FR + N + + +SPE + + R+ D KR++ +
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 196 THPWL 200
H W
Sbjct: 273 NHEWF 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
F + GGEL D I + GR E +A+ + ++IL+ V +CH VVHRDLKPEN
Sbjct: 84 TDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 142
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSY-NVEGDMWSIGV 130
L K+ DFGLS+ + + L D GS Y APEV+ R Y E D+WS GV
Sbjct: 143 LLDAHMN---AKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
I Y LLCG+ PF +F+ + F+ + + S + +L D KR T
Sbjct: 200 ILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRS--VATLLMHMLQVDPLKRAT 255
Query: 191 AAQALTHPWL 200
H W
Sbjct: 256 IKDIREHEWF 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ +FG
Sbjct: 99 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFG 155
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 156 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 215 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 32 LSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS 91
L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ DFG S
Sbjct: 104 LQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 160
Query: 92 DFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTESGI 150
P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 161 VHA-PSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 151 FRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 30 RILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFG 89
R L + ++ E+ T + ++ N +++CH + V+HRD+KPEN L + E LK+ +FG
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFG 156
Query: 90 LSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTES 148
S P R + G+ Y+ PE++ R ++ + D+WS+GV+ Y L G PF A T
Sbjct: 157 WSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
++ + R + F D V+ A+D + RLL + +R + L HPW+
Sbjct: 216 ETYKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
SN C GE+ + +R + E +A+ + +I+ + + H G++HRDL N
Sbjct: 83 SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSN 142
Query: 72 FLFTTREEDAPLKVIDFGLSDFVR-PDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIG 129
L T + +K+ DFGL+ ++ P ++ + G+ Y++PE+ RS + +E D+WS+G
Sbjct: 143 LLLT---RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLG 199
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRAD---PNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
+ Y LL G PF T V+ AD P+F +S EAKD + +LL ++
Sbjct: 200 CMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSF-------LSIEAKDLIHQLLRRNPA 252
Query: 187 KRMTAAQALTHPWL 200
R++ + L HP++
Sbjct: 253 DRLSLSSVLDHPFM 266
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
+ + GGE+ D +++ G R E++A++ +I++ V +CH + +VHRDLK EN
Sbjct: 84 KTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGV 130
L + D +K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GV
Sbjct: 143 LL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
I Y L+ GS PF + + VLR + P+ +S + ++ ++R L + KR T
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNPIKRGT 255
Query: 191 AAQALTHPWL---HDENRPVP 208
Q + W+ H+E+ P
Sbjct: 256 LEQIMKDRWINAGHEEDELKP 276
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L + FY ++ + GEL L + + E+ TI+E++ + + +CH + V+
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKE-LQKSCTFDEQRTATIMEELADALMYCHGKKVI 145
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
HRD+KPEN L + E + DFG S P R + G+ Y+ PE++ R +N +
Sbjct: 146 HRDIKPENLLLGLKGELK---IADFGWSVHA-PSLRRKTMCGTLDYLPPEMIEGRMHNEK 201
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+W IGV+ Y LL G+ PF + + + +R +++ D F SV A+D + +LL
Sbjct: 202 VDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFP----ASVPTGAQDLISKLLR 257
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
+ +R+ AQ HPW+ +R V
Sbjct: 258 HNPSERLPLAQVSAHPWVRANSRRV 282
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL +RI + GR+ E++A+ +++++ V++CH V HRDLK EN L
Sbjct: 96 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSP-- 152
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE-GDMWSIGVITYILLC 137
AP LK+ FG S + VG+ Y+APEV L + Y+ + D+WS GV Y++L
Sbjct: 153 APRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 138 GSRPFWARTESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
G+ PF E FR + N + + +SPE + + R+ D KR++ +
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 196 THPWL 200
H W
Sbjct: 273 NHEWF 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
F + GGEL D I + GR E +A+ + ++IL+ V +CH VVHRDLKPEN
Sbjct: 84 TDFFMVMEYVSGGELFDYI-CKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENV 142
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSY-NVEGDMWSIGV 130
L + K+ DFGLS+ + + L GS Y APEV+ R Y E D+WS GV
Sbjct: 143 LL---DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
I Y LLCG+ PF +F+ + F+ + + S + +L D KR T
Sbjct: 200 ILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRS--VATLLMHMLQVDPLKRAT 255
Query: 191 AAQALTHPWL 200
H W
Sbjct: 256 IKDIREHEWF 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F GEL + L + GR+ E+ + T +E++ + + +CH + V+HRD+KPEN L + E
Sbjct: 96 FAPRGELY-KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE- 153
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGS 139
LK+ DFG S P R + G+ Y+ PE++ ++++ + D+W GV+ Y L G
Sbjct: 154 --LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 210
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW 199
PF + + + R ++ D F P +S +KD + +LL +R+ + HPW
Sbjct: 211 PPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 266
Query: 200 LHDENRPV 207
+ +R V
Sbjct: 267 VKANSRRV 274
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F GEL + L + GR+ E+ + T +E++ + + +CH + V+HRD+KPEN L + E
Sbjct: 95 FAPRGELY-KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE- 152
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGS 139
LK+ DFG S P R + G+ Y+ PE++ ++++ + D+W GV+ Y L G
Sbjct: 153 --LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW 199
PF + + + R ++ D F P +S +KD + +LL +R+ + HPW
Sbjct: 210 PPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
Query: 200 LHDENRPV 207
+ +R V
Sbjct: 266 VKANSRRV 273
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F GEL + L + GR+ E+ + T +E++ + + +CH + V+HRD+KPEN L + E
Sbjct: 95 FAPRGELY-KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE- 152
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGS 139
LK+ DFG S P R + G+ Y+ PE++ ++++ + D+W GV+ Y L G
Sbjct: 153 --LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW 199
PF + + + R ++ D F P +S +KD + +LL +R+ + HPW
Sbjct: 210 PPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265
Query: 200 LHDENRPV 207
+ +R V
Sbjct: 266 VKANSRRV 273
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L++ GS Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 265
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 266 WMNVGHEDDELKP 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 13/201 (6%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
+ + GGE+ D +++ G R E++A++ +I++ V +CH + +VHRDLK EN
Sbjct: 87 KTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGV 130
L + D +K+ DFG S+ +L+ G+ Y APE+ + Y+ E D+WS+GV
Sbjct: 146 LL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
I Y L+ GS PF + + VLR + P+ +S + ++ ++R L + KR T
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNPIKRGT 258
Query: 191 AAQALTHPWL---HDENRPVP 208
Q + W+ H+E+ P
Sbjct: 259 LEQIMKDRWINAGHEEDELKP 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 98 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 152
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 153 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 213 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 267
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 268 LKHPFLAKAGPPASIVPL 285
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 8/185 (4%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL +RI + GR+ E++A+ +++++ V++ H V HRDLK EN L
Sbjct: 96 YASGGELFERICN-AGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDG--SP 152
Query: 81 AP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE-GDMWSIGVITYILLC 137
AP LK+ DFG S + VG+ Y+APEV L + Y+ + D+WS GV Y++L
Sbjct: 153 APRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 138 GSRPFWARTESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
G+ PF E FR + N + + +SPE + + R+ D KR++ +
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 196 THPWL 200
H W
Sbjct: 273 NHEWF 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 107 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 161
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 162 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 222 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 276
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 277 LKHPFLAKAGPPASIVPL 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 109 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 163
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 164 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 224 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 278
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 279 LKHPFLAKAGPPASIVPL 296
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 102 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 156
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 157 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 217 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 271
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 272 LKHPFLAKAGPPASIVPL 289
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 152 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 206
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 207 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 267 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 321
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 322 LKHPFLAKAGPPASIVPL 339
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 265
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 266 WMNVGHEDDELKP 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 265
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 266 WMNVGHEDDELKP 278
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 265
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 266 WMNVGHEDDELKP 278
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
G EL D I+ R + E++A+ ++I++ V +CH +VHRDLKPEN L +E +
Sbjct: 97 GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNV 152
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY--NVEGDMWSIGVITYILLCGSRP 141
K+ DFGLS+ + L GS Y APEV+ E D+WS GVI Y++LC P
Sbjct: 153 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
Query: 142 FWARTESGIFRSV---LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F + +F+++ + P F +SP A ++R+L + R++ + +
Sbjct: 213 FDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 265
Query: 199 W 199
W
Sbjct: 266 W 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE + +L ++ H QGV+HRD+K ++ L T D
Sbjct: 229 FLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HD 283
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + R +VG+ Y++APE++ R Y E D+WS+G++ ++ G
Sbjct: 284 GRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ + + P N H VSP K F+ RLL +D +R TAA+
Sbjct: 344 EPPYFNEPPLKAMKMIRDNLPPRLKNLH-----KVSPSLKGFLDRLLVRDPAQRATAAEL 398
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 399 LKHPFLAKAGPPASIVPL 416
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
G EL D I+ R + E++A+ ++I++ V +CH +VHRDLKPEN L +E +
Sbjct: 87 GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNV 142
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY--NVEGDMWSIGVITYILLCGSRP 141
K+ DFGLS+ + L GS Y APEV+ E D+WS GVI Y++LC P
Sbjct: 143 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
Query: 142 FWARTESGIFRSV---LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F + +F+++ + P F +SP A ++R+L + R++ + +
Sbjct: 203 FDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 255
Query: 199 W 199
W
Sbjct: 256 W 256
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
G EL D I+ R + E++A+ ++I++ V +CH +VHRDLKPEN L +E +
Sbjct: 96 GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNV 151
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY--NVEGDMWSIGVITYILLCGSRP 141
K+ DFGLS+ + L GS Y APEV+ E D+WS GVI Y++LC P
Sbjct: 152 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
Query: 142 FWARTESGIFRSV---LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F + +F+++ + P F +SP A ++R+L + R++ + +
Sbjct: 212 FDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264
Query: 199 W 199
W
Sbjct: 265 W 265
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
G EL D I+ R + E++A+ ++I++ V +CH +VHRDLKPEN L +E +
Sbjct: 91 GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNV 146
Query: 84 KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSY--NVEGDMWSIGVITYILLCGSRP 141
K+ DFGLS+ + L GS Y APEV+ E D+WS GVI Y++LC P
Sbjct: 147 KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
Query: 142 FWARTESGIFRSV---LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F + +F+++ + P F +SP A ++R+L + R++ + +
Sbjct: 207 FDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQDD 259
Query: 199 W 199
W
Sbjct: 260 W 260
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L +Y N+ FC GG + +L E + + ++ L+ + + H ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL------HRS 118
DLK N LFT D +K+ DFG+S R QR + +G+ Y++APEV+ R
Sbjct: 160 DLKAGNILFTL---DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP--WPSVSPEAKDF 176
Y+ + D+WS+G+ + P + + +++P P W S KDF
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH-DENRPV 207
+++ L K+ R T +Q L HP++ D N+P+
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L +Y N+ FC GG + +L E + + ++ L+ + + H ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL------HRS 118
DLK N LFT D +K+ DFG+S R QR + +G+ Y++APEV+ R
Sbjct: 160 DLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP--WPSVSPEAKDF 176
Y+ + D+WS+G+ + P + + +++P P W S KDF
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH-DENRPV 207
+++ L K+ R T +Q L HP++ D N+P+
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 16/212 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L +Y N+ FC GG + +L E + + ++ L+ + + H ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL------HRS 118
DLK N LFT D +K+ DFG+S R QR + +G+ Y++APEV+ R
Sbjct: 160 DLKAGNILFTL---DGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP--WPSVSPEAKDF 176
Y+ + D+WS+G+ + P + + +++P P W S KDF
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 177 VRRLLNKDHRKRMTAAQALTHPWLH-DENRPV 207
+++ L K+ R T +Q L HP++ D N+P+
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 305
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ G+ Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 MNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 265
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 266 WMNVGHEDDELKP 278
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 19/213 (8%)
Query: 3 HQKLQH---------LFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI 53
H+ L+H + + GGEL +RI + GR+ E++A+ +++L+
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARFFFQQLLSG 128
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAP-LKVIDFGLSDFVRPDQRLNDIVGSAYYVAP 112
V++CH + HRDLK EN L AP LK+ DFG S + VG+ Y+AP
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDG--SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
Query: 113 EVLHRS-YNVE-GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-- 168
EVL R Y+ + D+WS GV Y++L G+ PF E +R ++ + S P
Sbjct: 187 EVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPDDI 245
Query: 169 -VSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+SPE + R+ D R++ + TH W
Sbjct: 246 RISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N L E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 131 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 188
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 308
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 309 QSRLTAREAMEHPYFY 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 131 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 188
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 308
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 309 QSRLTAREAMEHPYFY 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 130 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 187
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 247
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 248 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 307
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 308 QSRLTAREAMEHPYFY 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 137 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 194
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 195 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 254
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 255 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 314
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 315 QSRLTAREAMEHPYFY 330
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + +IL + +CH G++HRD+KP N + E L++ID+GL++F P Q N
Sbjct: 132 DIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQEYN 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 190 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 249
Query: 149 -------GIFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
I + + DP F+D W VSPEA DF+ +LL DH
Sbjct: 250 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDH 309
Query: 186 RKRMTAAQALTHPWLH 201
+ R+TA +A+ HP+ +
Sbjct: 310 QSRLTAREAMEHPYFY 325
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 87 YASGGEVFDYLVAHGWMK-EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 142
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 143 MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ +S + ++ +++ L + KR T Q +
Sbjct: 203 SLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIMKDR 258
Query: 199 WLH-----DENRP 206
W++ DE +P
Sbjct: 259 WMNVGHEDDELKP 271
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH +G++HRD+KP N + +++ L++ID+GL++F P Q N
Sbjct: 138 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPAQEYN 195
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 196 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 255
Query: 149 ------GIFRSV-LRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
G + + DP+F+D W + VSPEA D + +LL DH
Sbjct: 256 GTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDH 315
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+ HP+ +
Sbjct: 316 QQRLTAKEAMEHPYFY 331
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH +G++HRD+KP N + +++ L++ID+GL++F P Q N
Sbjct: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYN 190
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES----------- 148
V S Y+ PE+L ++ Y+ DMWS+G + ++ PF+ ++
Sbjct: 191 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVL 250
Query: 149 ------GIFRSV-LRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
G + + DP+F+D W + VSPEA D + +LL DH
Sbjct: 251 GTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDH 310
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+ HP+ +
Sbjct: 311 QQRLTAKEAMEHPYFY 326
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 16/188 (8%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ EGGEL +L + R+ AK ++ + + H + +++RDLKPEN L +++
Sbjct: 87 YIEGGELFS-LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKN 142
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGS 139
+K+ DFG + +V PD + G+ Y+APEV+ + YN D WS G++ Y +L G
Sbjct: 143 GHIKITDFGFAKYV-PDVTYX-LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALT--- 196
PF+ + +L A+ F P + + KD + RL+ +D +R+ Q T
Sbjct: 201 TPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256
Query: 197 --HPWLHD 202
HPW +
Sbjct: 257 KNHPWFKE 264
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L +Y N+ FC GG + +L E + + ++ L+ + + H ++HR
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS--DFVRPDQRLNDIVGSAYYVAPEVL------HR 117
DLK N LFT D +K+ DFG+S + QR + +G+ Y++APEV+ R
Sbjct: 133 DLKAGNILFTL---DGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 118 SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP--WPSVSPEAKD 175
Y+ + D+WS+G+ + P + + +++P P W S KD
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKD 246
Query: 176 FVRRLLNKDHRKRMTAAQALTHPWLH-DENRPV 207
F+++ L K+ R T +Q L HP++ D N+P+
Sbjct: 247 FLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPI 279
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL + F + L+ F GG+L R LS+ + EED K + ++ + H G++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLH-RSYNV 121
+RDLKPEN L +E+ +K+ DFGLS + + +++ G+ Y+APEV++ R +
Sbjct: 149 YRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD---PNFHDSPWPSVSPEAKDFVR 178
D WS GV+ + +L G+ PF + +L+A P F +SPEA+ +R
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLR 258
Query: 179 RLLNKDHRKRMTAA 192
L ++ R+ A
Sbjct: 259 MLFKRNPANRLGAG 272
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL + F + L+ F GG+L R LS+ + EED K + ++ + H G++
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGII 149
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLH-RSYNV 121
+RDLKPEN L +E+ +K+ DFGLS + + +++ G+ Y+APEV++ R +
Sbjct: 150 YRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD---PNFHDSPWPSVSPEAKDFVR 178
D WS GV+ + +L G+ PF + +L+A P F +SPEA+ +R
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLR 259
Query: 179 RLLNKDHRKRMTAA 192
L ++ R+ A
Sbjct: 260 MLFKRNPANRLGAG 273
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL + F + L+ F GG+L R LS+ + EED K + ++ + H G++
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALALDHLHSLGII 148
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLH-RSYNV 121
+RDLKPEN L +E+ +K+ DFGLS + + +++ G+ Y+APEV++ R +
Sbjct: 149 YRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD---PNFHDSPWPSVSPEAKDFVR 178
D WS GV+ + +L G+ PF + +L+A P F +SPEA+ +R
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLR 258
Query: 179 RLLNKDHRKRMTAA 192
L ++ R+ A
Sbjct: 259 MLFKRNPANRLGAG 272
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYFQ 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 127 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 184
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+THP+
Sbjct: 305 QERLTALEAMTHPYFQ 320
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWL 200
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYF 318
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYFQ 319
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 128 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 185
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 186 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 245
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 246 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 305
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+THP+
Sbjct: 306 QERLTALEAMTHPYFQ 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWL 200
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWL 200
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYF 318
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 183
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 184 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 186 RKRMTAAQALTHPWL 200
++R+TA +A+THP+
Sbjct: 304 QERLTALEAMTHPYF 318
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 38/196 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 127 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 184
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 185 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 186 RKRMTAAQALTHPWLH 201
++R+TA +A+THP+
Sbjct: 305 QERLTALEAMTHPYFQ 320
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 38/195 (19%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
D + + ++L + +CH QG++HRD+KP N + E L++ID+GL++F P + N
Sbjct: 147 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYN 204
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG---------- 149
V S Y+ PE+L + Y+ DMWS+G + ++ PF+ ++
Sbjct: 205 VRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 264
Query: 150 --------IFRSVLRADPNFHD-------SPWPS---------VSPEAKDFVRRLLNKDH 185
+ + + DP PW VSPEA DF+ +LL DH
Sbjct: 265 GTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 324
Query: 186 RKRMTAAQALTHPWL 200
++R+TA +A+THP+
Sbjct: 325 QERLTALEAMTHPYF 339
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 15/193 (7%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L + D
Sbjct: 94 YASGGEVFDYLVAHG-RXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DAD 149
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVITYILLCG 138
+K+ DFG S+ +L+ G+ Y APE+ + Y+ E D+WS+GVI Y L+ G
Sbjct: 150 XNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
Query: 139 SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
S PF + + VLR + P+ S + ++ +++ L + KR T Q
Sbjct: 210 SLPFDGQNLKELRERVLRGK---YRIPF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDR 265
Query: 199 WLH-----DENRP 206
W + DE +P
Sbjct: 266 WXNVGHEDDELKP 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 131
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 132 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 188
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 189 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 244
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 245 KDPKQRLGGG 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 242 KDPKQRLGGG 251
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA 185
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 242 KDPKQRLGGG 251
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 242 KDPKQRLGGG 251
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 133
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 134 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 246
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 247 KDPKQRLGGG 256
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLK 241
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 242 KDPKQRLGGG 251
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 11/190 (5%)
Query: 6 LQHLFYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L++ F ++ L F + GGEL LSR + EE A+ +I++ + + H + VV+
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFH-LSRERVFTEERARFYGAEIVSALEYLHSRDVVY 128
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RD+K EN + ++D +K+ DFGL + + + G+ Y+APEVL Y
Sbjct: 129 RDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRA 185
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D W +GV+ Y ++CG PF+ + +F +L + F ++SPEAK + LL
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLK 241
Query: 183 KDHRKRMTAA 192
KD ++R+
Sbjct: 242 KDPKQRLGGG 251
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 129
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 130 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 187 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 245
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 246 ENPSARITIPDIKKDRWY---NKPL 267
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 6/146 (4%)
Query: 14 SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFL 73
+ + GGE+ D +++ G R E++A+ +I++ V +CH + +VHRDLK EN L
Sbjct: 88 TLYLVMEYASGGEVFDYLVAHG-RMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLL 146
Query: 74 FTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-RSYN-VEGDMWSIGVI 131
+ D +K+ DFG S+ +L+ GS Y APE+ + Y+ E D+WS+GVI
Sbjct: 147 L---DGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 132 TYILLCGSRPFWARTESGIFRSVLRA 157
Y L+ GS PF + + VLR
Sbjct: 204 LYTLVSGSLPFDGQNLKELRERVLRG 229
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 132 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 247
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 248 ENPSARITIPDIKKDRWY---NKPL 269
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 8 HLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
H N F +C GGEL DRI G E DA+ +++ V + H G+ HRD+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVL-HRSYNVEG 123
KPEN L R+ LK+ DFGL+ R + R LN + G+ YVAPE+L R ++ E
Sbjct: 131 KPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 124 -DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS G++ +L G P+ ++S S + + + PW + + ++L
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN-PWKKIDSAPLALLHKILV 246
Query: 183 KDHRKRMTAAQALTHPWLHDENRPV 207
++ R+T W N+P+
Sbjct: 247 ENPSARITIPDIKKDRWY---NKPL 268
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 34/195 (17%)
Query: 35 GGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFV 94
G ++ EE + +V ++L + + H GVVHRDLKP N ED LK++DFGL+
Sbjct: 120 GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHA 176
Query: 95 RPDQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFR 152
D + V + +Y APEV+ YN D+WS+G I +L G F +
Sbjct: 177 --DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 234
Query: 153 SVLR-----------------ADPNFHDSP----------WPSVSPEAKDFVRRLLNKDH 185
+L+ A P +P SP+A D + ++L D
Sbjct: 235 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 294
Query: 186 RKRMTAAQALTHPWL 200
KR+TAAQALTHP+
Sbjct: 295 DKRLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 89/195 (45%), Gaps = 34/195 (17%)
Query: 35 GGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFV 94
G + EE + +V ++L + + H GVVHRDLKP N ED LK++DFGL+
Sbjct: 138 GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARHA 194
Query: 95 RPDQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFR 152
D + V + +Y APEV+ YN D+WS+G I +L G F +
Sbjct: 195 --DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLT 252
Query: 153 SVLR-----------------ADPNFHDSP----------WPSVSPEAKDFVRRLLNKDH 185
+L+ A P +P SP+A D + ++L D
Sbjct: 253 QILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDV 312
Query: 186 RKRMTAAQALTHPWL 200
KR+TAAQALTHP+
Sbjct: 313 DKRLTAAQALTHPFF 327
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFGL+ V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLMI---DQQGYIKVTDFGLAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F EGG L D + R EE T+ +L +++ H QGV+HRD+K ++ L T+ D
Sbjct: 123 FLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---D 177
Query: 81 APLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILLCG 138
+K+ DFG V + + +VG+ Y++APEV+ R Y E D+WS+G++ ++ G
Sbjct: 178 GRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 139 SRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
P++ R + + P + H VS + F+ +L ++ +R TA +
Sbjct: 238 EPPYFNEPPLQAMRRIRDSLPPRVKDLH-----KVSSVLRGFLDLMLVREPSQRATAQEL 292
Query: 195 LTHPWLHDENRP---VPL 209
L HP+L P VPL
Sbjct: 293 LGHPFLKLAGPPSCIVPL 310
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 19/179 (10%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+ GGEL LS+ R+ E + + V +I+ + H G+++RD+K EN L + +
Sbjct: 140 YINGGELFTH-LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSN 195
Query: 81 APLKVIDFGLS-DFVRPD-QRLNDIVGSAYYVAPEVLH---RSYNVEGDMWSIGVITYIL 135
+ + DFGLS +FV + +R D G+ Y+AP+++ ++ D WS+GV+ Y L
Sbjct: 196 GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYEL 255
Query: 136 LCGSRPFWA----RTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLLNKDHRKRM 189
L G+ PF +++ I R +L+++P P+P +S AKD ++RLL KD +KR+
Sbjct: 256 LTGASPFTVDGEKNSQAEISRRILKSEP-----PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L H+F + + F + GG+L+ I S L E IL + F H
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL-QFLH 136
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVL-H 116
+G+V+RDLK +N L ++D +K+ DFG+ + + D + N+ G+ Y+APE+L
Sbjct: 137 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG 193
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
+ YN D WS GV+ Y +L G PF + E +F S+ R D F+ W + EAKD
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-RMDNPFYPR-W--LEKEAKDL 249
Query: 177 VRRLLNKDHRKRMTAAQAL-THPWLHDEN 204
+ +L ++ KR+ + HP + N
Sbjct: 250 LVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 92 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 150
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L +E ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 151 YRDLKPENLLI---DEQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 205
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 260
Query: 182 NKDHRKRM 189
D KR
Sbjct: 261 QVDLTKRF 268
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVLEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKRM 189
D KR
Sbjct: 275 QVDLTKRF 282
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEED-AKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ FC G + D I + G L+E+ I +IL ++ H V+HRD+K +N
Sbjct: 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN 159
Query: 72 FLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL------HRSYNVEGD 124
L T E+A +K++DFG+S R R N +G+ Y++APEV+ +Y+ + D
Sbjct: 160 VLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSD 216
Query: 125 MWSIGVITYILLCGSRPFW-ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNK 183
+WS+G+ + G+ P +F P W S + + F+ L K
Sbjct: 217 LWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVK 273
Query: 184 DHRKRMTAAQALTHPWLHDE 203
+H +R Q + HP++ D+
Sbjct: 274 NHSQRPATEQLMKHPFIRDQ 293
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ ++V DFGL+ V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLMI---DQQGYIQVTDFGLAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL++ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL++ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 15/209 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L H+F + + F + GG+L+ I S L E IL + F H
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL-QFLH 135
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVL-H 116
+G+V+RDLK +N L ++D +K+ DFG+ + + D + N G+ Y+APE+L
Sbjct: 136 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG 192
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
+ YN D WS GV+ Y +L G PF + E +F S+ R D F+ W + EAKD
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI-RMDNPFYPR-W--LEKEAKDL 248
Query: 177 VRRLLNKDHRKRMTAAQAL-THPWLHDEN 204
+ +L ++ KR+ + HP + N
Sbjct: 249 LVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL++ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ +KV DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 182 NKDHRKR 188
D KR
Sbjct: 295 QVDLTKR 301
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 157 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 266
Query: 182 NKDHRKR 188
D KR
Sbjct: 267 QVDLTKR 273
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 159 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 213
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 268
Query: 182 NKDHRKRM 189
D KR
Sbjct: 269 QVDLTKRF 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL + F + L+ F GG+L R LS+ + EED K + ++ + H G++
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTR-LSKEVMFTEEDVKFYLAELALGLDHLHSLGII 152
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR-SYNV 121
+RDLKPEN L +E+ +K+ DFGLS + + +++ G+ Y+APEV++R ++
Sbjct: 153 YRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSH 209
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD---PNFHDSPWPSVSPEAKDFVR 178
D WS GV+ + +L GS PF + +L+A P F +S EA+ +R
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF-------LSTEAQSLLR 262
Query: 179 RLLNKDHRKRMTAA 192
L ++ R+ +
Sbjct: 263 ALFKRNPANRLGSG 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L + F + L+ + GGEL + L R G ++E+ A + +I + H +G+++
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQ-LEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVE 122
RDLKPEN + +K+ DFGL + + + G+ Y+APE+L RS +N
Sbjct: 145 RDLKPENIMLN---HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRA 201
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D WS+G + Y +L G+ PF +L+ N P ++ EA+D +++LL
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLK 257
Query: 183 KDHRKRMT-----AAQALTHPWLHDEN 204
++ R+ A + HP+ N
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L + F + L+ + GGEL + L R G ++E+ A + +I + H +G+++
Sbjct: 86 LIYAFQTGGKLYLILEYLSGGELFMQ-LEREGIFMEDTACFYLAEISMALGHLHQKGIIY 144
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVE 122
RDLKPEN + +K+ DFGL + + + G+ Y+APE+L RS +N
Sbjct: 145 RDLKPENIMLN---HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRA 201
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D WS+G + Y +L G+ PF +L+ N P ++ EA+D +++LL
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLK 257
Query: 183 KDHRKRMT-----AAQALTHPWLHDEN 204
++ R+ A + HP+ N
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L L YS + F + GGEL LSR + E+ A+ +I++ + + H
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 59 LQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH 116
+ VV+RDLK EN + ++D +K+ DFGL + ++ + G+ Y+APEVL
Sbjct: 266 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 322
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
Y D W +GV+ Y ++CG PF+ + +F +L + F ++ PEAK
Sbjct: 323 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 378
Query: 176 FVRRLLNKDHRKRMTAA 192
+ LL KD ++R+
Sbjct: 379 LLSGLLKKDPKQRLGGG 395
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L L YS + F + GGEL LSR + E+ A+ +I++ + + H
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 59 LQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH 116
+ VV+RDLK EN + ++D +K+ DFGL + ++ + G+ Y+APEVL
Sbjct: 269 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE 325
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
Y D W +GV+ Y ++CG PF+ + +F +L + F ++ PEAK
Sbjct: 326 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 381
Query: 176 FVRRLLNKDHRKRMTAA 192
+ LL KD ++R+
Sbjct: 382 LLSGLLKKDPKQRLGGG 398
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L L YS + F + GGEL LSR + E+ A+ +I++ + + H
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 59 LQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH 116
+ VV+RDLK EN + ++D +K+ DFGL + ++ + G+ Y+APEVL
Sbjct: 127 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
Y D W +GV+ Y ++CG PF+ + +F +L + F ++ PEAK
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 239
Query: 176 FVRRLLNKDHRKRMTAA 192
+ LL KD ++R+
Sbjct: 240 LLSGLLKKDPKQRLGGG 256
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 91 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 149
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 150 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEYLAPEIILSKGYNKA 204
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 259
Query: 182 NKDHRKR 188
D KR
Sbjct: 260 QVDLTKR 266
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L L YS + F + GGEL LSR + E+ A+ +I++ + + H
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 59 LQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH 116
+ VV+RDLK EN + ++D +K+ DFGL + ++ + G+ Y+APEVL
Sbjct: 128 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
Y D W +GV+ Y ++CG PF+ + +F +L + F ++ PEAK
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 240
Query: 176 FVRRLLNKDHRKRMTAA 192
+ LL KD ++R+
Sbjct: 241 LLSGLLKKDPKQRLGGG 257
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 98 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 157 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 211
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 266
Query: 182 NKDHRKR 188
D KR
Sbjct: 267 QVDLTKR 273
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQ 98
E+ A+ + ++ + + H Q ++HRD+KP N L ED +K+ DFG+S +F D
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDA 192
Query: 99 RLNDIVGSAYYVAPEVLHRSYNVEG----DMWSIGVITYILLCGSRPFWARTESGIFRSV 154
L++ VG+ ++APE L + + D+W++GV Y + G PF + +
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 155 LRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
F D P ++ + KD + R+L+K+ R+ + HPW+
Sbjct: 253 KSQALEFPDQ--PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 3 HQKLQHLFYS----NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L L YS + F + GGEL LSR + E+ A+ +I++ + + H
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFH-LSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 59 LQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH 116
+ VV+RDLK EN + ++D +K+ DFGL + ++ + G+ Y+APEVL
Sbjct: 126 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD 175
Y D W +GV+ Y ++CG PF+ + +F +L + F ++ PEAK
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKS 238
Query: 176 FVRRLLNKDHRKRMTAA 192
+ LL KD ++R+
Sbjct: 239 LLSGLLKKDPKQRLGGG 255
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 219
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 182 NKDHRKR 188
D KR
Sbjct: 275 QVDLTKR 281
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 239
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 182 NKDHRKR 188
D KR
Sbjct: 295 QVDLTKR 301
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLMI---DQQGYIQVTDFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 43/211 (20%)
Query: 22 CEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDA 81
CEGG L+ + AK+ + ++LN +A+CH + V+HRDLKP+N L E
Sbjct: 93 CEGG--LESV----------TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-- 138
Query: 82 PLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCG 138
LK+ DFGL+ F P ++ V + +Y AP+VL + Y+ D+WS+G I ++ G
Sbjct: 139 -LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 139 SRPFWARTESG----IFR--------------SVLRADPNF---HDSPWPS----VSPEA 173
+ F +E+ IFR + + DPNF PW S +
Sbjct: 198 TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESG 257
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWLHDEN 204
D + ++L D +R+TA QAL H + + N
Sbjct: 258 IDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GG++ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE 122
+RDLKPEN L ++ +KV DFG + V+ R + G+ Y+APE+ L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 43/211 (20%)
Query: 22 CEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDA 81
CEGG L+ + AK+ + ++LN +A+CH + V+HRDLKP+N L E
Sbjct: 93 CEGG--LESV----------TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-- 138
Query: 82 PLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCG 138
LK+ DFGL+ F P ++ V + +Y AP+VL + Y+ D+WS+G I ++ G
Sbjct: 139 -LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 139 SRPFWARTESG----IFR--------------SVLRADPNF---HDSPWPS----VSPEA 173
+ F +E+ IFR + + DPNF PW S +
Sbjct: 198 APLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESG 257
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWLHDEN 204
D + ++L D +R+TA QAL H + + N
Sbjct: 258 IDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GG++ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVE 122
+RDLKPEN L ++ +KV DFG + V+ R + G+ Y+APE+ L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK--GRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKR 188
D KR
Sbjct: 274 QVDLTKR 280
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 43/211 (20%)
Query: 22 CEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDA 81
CEGG L+ + AK+ + ++LN +A+CH + V+HRDLKP+N L E
Sbjct: 93 CEGG--LESV----------TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE-- 138
Query: 82 PLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCG 138
LK+ DFGL+ F P ++ + + +Y AP+VL + Y+ D+WS+G I ++ G
Sbjct: 139 -LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
Query: 139 SRPFWARTESG----IFR--------------SVLRADPNF---HDSPWPS----VSPEA 173
+ F +E+ IFR + + DPNF PW S +
Sbjct: 198 TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESG 257
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWLHDEN 204
D + ++L D +R+TA QAL H + + N
Sbjct: 258 IDLLSKMLKLDPNQRITAKQALEHAYFKENN 288
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
++ N+ L+ +C G + D I R E++ TI++ L + + H +HRD+K
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIK 152
Query: 69 PENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR-SYNVEGDMW 126
N L T + K+ DFG++ + N ++G+ +++APEV+ YN D+W
Sbjct: 153 AGNILLNT---EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 127 SIGVITYILLCGSRPFWARTES--GIFRSVLRADPNFHDSP-WPSVSPEAKDFVRRLLNK 183
S+G IT I + +P +A IF P F W S DFV++ L K
Sbjct: 210 SLG-ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVK 265
Query: 184 DHRKRMTAAQALTHPWL 200
+R TA Q L HP++
Sbjct: 266 SPEQRATATQLLQHPFV 282
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN + ++ ++V DFG + V+ R + G+ Y+APE ++ + YN
Sbjct: 164 YRDLKPENLII---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ F + GGEL L R +LE A+ +I + + + H +V+RDLKPEN
Sbjct: 111 ADKLYFVLDYINGGELFYH-LQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN 169
Query: 72 FLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIG 129
L ++ + + DFGL + + + + G+ Y+APEVLH+ Y+ D W +G
Sbjct: 170 ILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLG 226
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
+ Y +L G PF++R + ++ ++L P+++ A+ + LL KD KR+
Sbjct: 227 AVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRL 282
Query: 190 TA 191
A
Sbjct: 283 GA 284
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 14/186 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRK 187
D K
Sbjct: 274 QVDLTK 279
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 14/187 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ + G+ Y+APE +L + YN
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKGATWT--LCGTPEYLAPEIILSKGYNKA 239
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 182 NKDHRKR 188
D KR
Sbjct: 295 QVDLTKR 301
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ Y+AP +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD-Q 98
E +A+ + + + V + H V+HRDLK N +D +K+ DFGL+ + D +
Sbjct: 125 EPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN---DDMDVKIGDFGLATKIEFDGE 181
Query: 99 RLNDIVGSAYYVAPEVL-HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA 157
R D+ G+ Y+APEVL + ++ E D+WS+G I Y LL G PF S + + +R
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFET---SCLKETYIRI 238
Query: 158 DPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALT 196
N + P ++P A +RR+L+ D R + A+ LT
Sbjct: 239 KKNEYSVPR-HINPVASALIRRMLHADPTLRPSVAELLT 276
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 9 LFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
F + F++ C LL+ + R E +A+ + + + V + H V+HRDL
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDM 125
K N +D +K+ DFGL+ + D +R D+ G+ Y+APEVL + ++ E D+
Sbjct: 169 KLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 126 WSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDH 185
WS+G I Y LL G PF S + + +R N + P ++P A +RR+L+ D
Sbjct: 226 WSLGCILYTLLVGKPPFET---SCLKETYIRIKKNEYSVPR-HINPVASALIRRMLHADP 281
Query: 186 RKRMTAAQALT 196
R + A+ LT
Sbjct: 282 TLRPSVAELLT 292
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLF 74
L R +L D I +G E ++ +++ + CH +GVVHRD+K EN L
Sbjct: 114 MLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
Query: 75 TTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVIT 132
R A K+IDFG + D+ D G+ Y PE + H+ + + +WS+G++
Sbjct: 173 DLRRGCA--KLIDFGSGALLH-DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILL 229
Query: 133 YILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAA 192
Y ++CG PF E +L A+ +F VSP+ +RR L R +
Sbjct: 230 YDMVCGDIPFERDQE------ILEAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLE 279
Query: 193 QALTHPWLHDENRPVPLD 210
+ L PW+ VPL+
Sbjct: 280 EILLDPWMQTPAEDVPLN 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 14/188 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
KL+ F NS L+ + GGE+ L R GR+ E A+ +I+ + H ++
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSH-LRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVE 122
+RDLKPEN L ++ ++V DFG + V+ R + G+ +APE +L + YN
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSKGYNKA 218
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS-VSPEAKDFVRRLL 181
D W++GV+ Y + G PF+A I+ ++ F PS S + KD +R LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 182 NKDHRKRM 189
D KR
Sbjct: 274 QVDLTKRF 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F N F+F C LL+ + R E +A+ + +I+ + H V+HRDLK
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDMW 126
N ED +K+ DFGL+ V D +R + G+ Y+APEVL + ++ E D+W
Sbjct: 145 LGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 127 SIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
SIG I Y LL G PF S + + LR N + P ++P A ++++L D
Sbjct: 202 SIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPT 257
Query: 187 KRMTAAQAL 195
R T + L
Sbjct: 258 ARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 19/204 (9%)
Query: 3 HQKLQH--------LFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI 53
H+ L H F N F+F C LL+ + R E +A+ + +I+
Sbjct: 75 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLG 133
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAP 112
+ H V+HRDLK N ED +K+ DFGL+ V D +R + G+ Y+AP
Sbjct: 134 CQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
Query: 113 EVL-HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSP 171
EVL + ++ E D+WSIG I Y LL G PF S + + LR N + P ++P
Sbjct: 191 EVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINP 246
Query: 172 EAKDFVRRLLNKDHRKRMTAAQAL 195
A ++++L D R T + L
Sbjct: 247 VAASLIQKMLQTDPTARPTINELL 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F N F+F C LL+ + R E +A+ + +I+ + H V+HRDLK
Sbjct: 86 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDMW 126
N ED +K+ DFGL+ V D +R + G+ Y+APEVL + ++ E D+W
Sbjct: 145 LGNLFLN---EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 127 SIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
SIG I Y LL G PF S + + LR N + P ++P A ++++L D
Sbjct: 202 SIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPT 257
Query: 187 KRMTAAQAL 195
R T + L
Sbjct: 258 ARPTINELL 266
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 99 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRL---NDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 158 FLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 270
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 18/210 (8%)
Query: 2 YHQKLQHLFYSNSFLF-FTRFCEGGELLDRILSRGGRYLEE-DAKTIVEKILNIVAFCHL 59
Y KL +Y + L+ FC GG + D I+ R L E + + ++L + F H
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--- 115
+ ++HRDLK N L T + +++ DFG+S ++ Q+ + +G+ Y++APEV+
Sbjct: 128 KRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 116 ---HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP--WPSVS 170
Y+ + D+WS+G+ + P + + ++DP +P W S
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---S 241
Query: 171 PEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
E +DF++ L+K+ R +AAQ L HP++
Sbjct: 242 VEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 2 YHQKLQHLFYSNSFLF-FTRFCEGGELLDRILSRGGRYLEE-DAKTIVEKILNIVAFCHL 59
Y KL +Y + L+ FC GG + D I+ R L E + + ++L + F H
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--- 115
+ ++HRDLK N L T + +++ DFG+S ++ Q+ + +G+ Y++APEV+
Sbjct: 136 KRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 116 ---HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPN--FHDSPWPSVS 170
Y+ + D+WS+G+ + P + + ++DP S W S
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---S 249
Query: 171 PEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
E +DF++ L+K+ R +AAQ L HP++
Sbjct: 250 VEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 99 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 157
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 158 FLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 213
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 270
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 11/205 (5%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F N F+F C LL+ + R E +A+ + +I+ + H V+HRDLK
Sbjct: 84 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDMW 126
N ED +K+ DFGL+ V D +R + G+ Y+APEVL + ++ E D+W
Sbjct: 143 LGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 199
Query: 127 SIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
SIG I Y LL G PF S + + LR N + P ++P A ++++L D
Sbjct: 200 SIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPT 255
Query: 187 KRMTAAQALTHPWLHDENRPVPLDI 211
R T + L + P L I
Sbjct: 256 ARPTINELLNDEFFTSGYIPARLPI 280
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 9 LFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
F + F++ C LL+ + R E +A+ + + + V + H V+HRDL
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDM 125
K N +D +K+ DFGL+ + D +R + G+ Y+APEVL + ++ E D+
Sbjct: 169 KLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 126 WSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDH 185
WS+G I Y LL G PF S + + +R N + P ++P A +RR+L+ D
Sbjct: 226 WSLGCILYTLLVGKPPFET---SCLKETYIRIKKNEYSVPR-HINPVASALIRRMLHADP 281
Query: 186 RKRMTAAQALT 196
R + A+ LT
Sbjct: 282 TLRPSVAELLT 292
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F N F+F C LL+ + R E +A+ + +I+ + H V+HRDLK
Sbjct: 108 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDMW 126
N ED +K+ DFGL+ V D +R + G+ Y+APEVL + ++ E D+W
Sbjct: 167 LGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 223
Query: 127 SIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
SIG I Y LL G PF S + + LR N + P ++P A ++++L D
Sbjct: 224 SIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPT 279
Query: 187 KRMTAAQAL 195
R T + L
Sbjct: 280 ARPTINELL 288
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 83 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 142 FLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 197
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 198 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 254
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 255 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 287
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 80 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 138
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 139 FLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 194
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 195 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 251
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 284
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F N F+F C LL+ + R E +A+ + +I+ + H V+HRDLK
Sbjct: 110 FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDMW 126
N ED +K+ DFGL+ V D +R + G+ Y+APEVL + ++ E D+W
Sbjct: 169 LGNLFLN---EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 225
Query: 127 SIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
SIG I Y LL G PF S + + LR N + P ++P A ++++L D
Sbjct: 226 SIGCIMYTLLVGKPPFET---SCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPT 281
Query: 187 KRMTAAQAL 195
R T + L
Sbjct: 282 ARPTINELL 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKPEN L T + +K+ DFGL+ F P +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXH 163
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 284 AHPFFQDVTKPVP 296
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 79 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 137
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 138 FLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 193
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 194 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 250
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 251 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 9 LFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDL 67
F + F++ C LL+ + R E +A+ + + + V + H V+HRDL
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 68 KPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVL-HRSYNVEGDM 125
K N +D +K+ DFGL+ + D +R + G+ Y+APEVL + ++ E D+
Sbjct: 169 KLGNLFLN---DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 126 WSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDH 185
WS+G I Y LL G PF S + + +R N + P ++P A +RR+L+ D
Sbjct: 226 WSLGCILYTLLVGKPPFET---SCLKETYIRIKKNEYSVPR-HINPVASALIRRMLHADP 281
Query: 186 RKRMTAAQALT 196
R + A+ LT
Sbjct: 282 TLRPSVAELLT 292
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L LK+
Sbjct: 96 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKL 152
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 212 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 101 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 157
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 217 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 143 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 199
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 259 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKPEN L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKPEN L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKPEN L T + +K+ DFGL+ F P +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXH 163
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 284 AHPFFQDVTKPVP 296
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---L 100
K+ + +L V H G+VH DLKP NFL D LK+IDFG+++ ++PD
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 213
Query: 101 NDIVGSAYYVAPEVLH--RSYNVEG----------DMWSIGVITYILLCGSRPFWARTES 148
+ VG+ Y+ PE + S G D+WS+G I Y + G PF + +
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIIN 272
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEA--KDFVRRLLNKDHRKRMTAAQALTHPWLHDENRP 206
I + DPN H+ +P + PE +D ++ L +D ++R++ + L HP++ + P
Sbjct: 273 QISKLHAIIDPN-HEIEFPDI-PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
Query: 207 V 207
V
Sbjct: 331 V 331
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 143 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 199
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 259 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 169
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 290 AHPFFQDVTKPVP 302
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L LK+
Sbjct: 96 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKL 152
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 212 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKPEN L T + +K+ DFGL+ F P +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXH 164
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 285 AHPFFQDVTKPVP 297
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 24/181 (13%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---L 100
K+ + +L V H G+VH DLKP NFL D LK+IDFG+++ ++PD
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVK 213
Query: 101 NDIVGSAYYVAPEVLH--RSYNVEG----------DMWSIGVITYILLCGSRPFWARTES 148
+ VG+ Y+ PE + S G D+WS+G I Y + G PF + +
Sbjct: 214 DSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIIN 272
Query: 149 GIFRSVLRADPNFHDSPWPSVSPEA--KDFVRRLLNKDHRKRMTAAQALTHPWLHDENRP 206
I + DPN H+ +P + PE +D ++ L +D ++R++ + L HP++ + P
Sbjct: 273 QISKLHAIIDPN-HEIEFPDI-PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP 330
Query: 207 V 207
V
Sbjct: 331 V 331
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 116 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 172
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 232 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 101 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 157
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 217 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
L R +L D I RG EE A++ ++L V CH GV+HRD+K EN L
Sbjct: 90 LILERMEPVQDLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 148
Query: 76 TREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITY 133
LK+IDFG ++ D D G+ Y PE + HR + +WS+G++ Y
Sbjct: 149 LNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLY 205
Query: 134 ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQ 193
++CG PF E ++R F VS E + +R L R T +
Sbjct: 206 DMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEE 255
Query: 194 ALTHPWLHD 202
HPW+ D
Sbjct: 256 IQNHPWMQD 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L LK+
Sbjct: 99 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKL 155
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 156 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 215 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
++ +++ C G L+ L + + K+ + +L V H G+VH DLKP N
Sbjct: 127 TDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN 185
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH--RSYNVEG--- 123
FL D LK+IDFG+++ ++PD + VG+ Y+ PE + S G
Sbjct: 186 FLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSK 241
Query: 124 -------DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA--K 174
D+WS+G I Y + G PF + + I + DPN H+ +P + PE +
Sbjct: 242 SKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISKLHAIIDPN-HEIEFPDI-PEKDLQ 298
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
D ++ L +D ++R++ + L HP++ + PV
Sbjct: 299 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 101 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 157
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 158 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 217 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 135 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 191
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 192 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 251 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 128 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 184
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 244 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 115 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 171
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 172 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 231 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 100 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 156
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 157 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 216 HDEE------IIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 143 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 199
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 200 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 259 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 163
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 284 AHPFFQDVTKPVP 296
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 123 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 179
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 180 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 239 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 116 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 172
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 232 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 115 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 171
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 172 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 231 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 148 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 204
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 205 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 264 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 161
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 116 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 172
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 173 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E ++R F VS E + +R L R T + HPW+ D
Sbjct: 232 HDEE------IIRGQVFFRQ----RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 33/205 (16%)
Query: 28 LDRILSRGGRYLEEDA-KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVI 86
L ++L L++ K + ++L VA CH ++HRDLKP+N L + D LK+
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLA 161
Query: 87 DFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
DFGL+ F P + V + +Y AP+VL + Y+ D+WSIG I ++ G F
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
Query: 144 ARTES----GIFRSVLRADPN------------------FHDSPWPSVSP----EAKDFV 177
T+ IF + +P F PW S+ P E D +
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281
Query: 178 RRLLNKDHRKRMTAAQALTHPWLHD 202
+L D KR++A A+ HP+ D
Sbjct: 282 SNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 113 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 169
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 229
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 290 AHPFFQDVTKPVP 302
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 93/205 (45%), Gaps = 33/205 (16%)
Query: 28 LDRILSRGGRYLEEDA-KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVI 86
L ++L L++ K + ++L VA CH ++HRDLKP+N L + D LK+
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLA 161
Query: 87 DFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
DFGL+ F P + V + +Y AP+VL + Y+ D+WSIG I ++ G F
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
Query: 144 ARTES----GIFRSVLRADPN------------------FHDSPWPSVSP----EAKDFV 177
T+ IF + +P F PW S+ P E D +
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281
Query: 178 RRLLNKDHRKRMTAAQALTHPWLHD 202
+L D KR++A A+ HP+ D
Sbjct: 282 SNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 162
Query: 103 IVGSAYYVAPEVLH--RSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 161
Query: 103 IVGSAYYVAPEVLH--RSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 161
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 161
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 164
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 285 AHPFFQDVTKPVP 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 163
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 284 AHPFFQDVTKPVP 296
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 161
Query: 103 IVGSAYYVAPEVLH--RSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 166
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 287 AHPFFQDVTKPVP 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++L +AFCH ++HRDLKP+N L R + LK+ DFGL+ F P + V +
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 108 YYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSP 165
+Y AP+VL R+Y+ D+WS G I ++ G F + + + ++S
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 166 WPSVS----------------------PEAK--------DFVRRLLNKDHRKRMTAAQAL 195
WPSV+ P K DF+ LL + R++A QAL
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 196 THPW 199
HPW
Sbjct: 293 HHPW 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 105 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 161
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 282 AHPFFQDVTKPVP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 166
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 226
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 287 AHPFFQDVTKPVP 299
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 164
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 285 AHPFFQDVTKPVP 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 163
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 223
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 284 AHPFFQDVTKPVP 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 164
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 224
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 285 AHPFFQDVTKPVP 297
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L + + GG L D + E + + L + F H V+HR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHR-SYNVEG 123
D+K +N L D +K+ DFG + P+Q + +++VG+ Y++APEV+ R +Y +
Sbjct: 141 DIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 124 DMWSIGVITYILLCGSRPFWARTE-SGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G++ ++ G P+ ++ P + +S +DF+ R L+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLD 255
Query: 183 KDHRKRMTAAQALTHPWL 200
D KR +A + L H +L
Sbjct: 256 MDVEKRGSAKELLQHQFL 273
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 165
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 286 AHPFFQDVTKPVP 298
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 12 SNSFLFFT-RFCEGGELLDRILSRGGR---YLEED-AKTIVEKILNIVAFCHLQG----- 61
+N+ L+ +CEGG+L ++++G + YL+E+ ++ ++ + CH +
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SY 119
V+HRDLKP N ++ +K+ DFGL+ + D+ + VG+ YY++PE ++R SY
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
N + D+WS+G + Y L PF A ++ + + + F P+ S E + + R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITR 250
Query: 180 LLNKDHRKRMTAAQALTHPWL 200
+LN R + + L +P +
Sbjct: 251 MLNLKDYHRPSVEEILENPLI 271
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 95/193 (49%), Gaps = 31/193 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L ++FCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHDENRPVP 208
HP+ D +PVP
Sbjct: 283 AHPFFQDVTKPVP 295
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 38/217 (17%)
Query: 13 NSFLFFTRFCEGGELLD---RILSRG----GRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + GG +LD I+++G G E TI+ ++L + + H G +HR
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRP--DQRLNDI----VGSAYYVAPEVLH--R 117
D+K N L ED +++ DFG+S F+ D N + VG+ ++APEV+ R
Sbjct: 146 DVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 118 SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD-- 175
Y+ + D+WS G+ L G+ P+ + L+ DP PS+ +D
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQDKE 255
Query: 176 -----------FVRRLLNKDHRKRMTAAQALTHPWLH 201
+ L KD KR TAA+ L H +
Sbjct: 256 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L + + GG L D + E + + L + F H V+HR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHR-SYNVEG 123
D+K +N L D +K+ DFG + P+Q + + +VG+ Y++APEV+ R +Y +
Sbjct: 141 DIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 124 DMWSIGVITYILLCGSRPFWARTE-SGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G++ ++ G P+ ++ P + +S +DF+ R L+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLD 255
Query: 183 KDHRKRMTAAQALTHPWL 200
D KR +A + L H +L
Sbjct: 256 MDVEKRGSAKELLQHQFL 273
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 34/197 (17%)
Query: 36 GRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR 95
G LEE A+ + ++L + + H V+HRDLKP N T ED LK+ DFGL+ +
Sbjct: 115 GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMD 172
Query: 96 P----DQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG 149
P L++ + + +Y +P +L +Y DMW+ G I +L G F E
Sbjct: 173 PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
Query: 150 IFRSVLRADPNFHDSP--------------------------WPSVSPEAKDFVRRLLNK 183
+ +L + P H+ P +S EA DF+ ++L
Sbjct: 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTF 292
Query: 184 DHRKRMTAAQALTHPWL 200
R+TA +AL+HP++
Sbjct: 293 SPMDRLTAEEALSHPYM 309
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 32/202 (15%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+CE G L D I S ++ + +IL +++ H QG++HRDLKP N +E
Sbjct: 96 YCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DES 152
Query: 81 APLKVIDFGLS-------DFVRPDQR--------LNDIVGSAYYVAPEVLHRS--YNVEG 123
+K+ DFGL+ D ++ D + L +G+A YVA EVL + YN +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-----DPNFHDSPWPSVSPEAKDFVR 178
DM+S+G+I + ++ PF E LR+ P+F D+ K +R
Sbjct: 213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV----EKKIIR 265
Query: 179 RLLNKDHRKRMTAAQALTHPWL 200
L++ D KR A L WL
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 38/213 (17%)
Query: 13 NSFLFFTRFCEGGELLD---RILSRG----GRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + GG +LD I+++G G E TI+ ++L + + H G +HR
Sbjct: 81 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 140
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRP--DQRLNDI----VGSAYYVAPEVLH--R 117
D+K N L ED +++ DFG+S F+ D N + VG+ ++APEV+ R
Sbjct: 141 DVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 118 SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKD-- 175
Y+ + D+WS G+ L G+ P+ + L+ DP PS+ +D
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQDKE 250
Query: 176 -----------FVRRLLNKDHRKRMTAAQALTH 197
+ L KD KR TAA+ L H
Sbjct: 251 MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 128 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 184
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 244 HDEEIIGGQVFFRQ----------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 128 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 184
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 244 HDEEIIGGQVFFRQ----------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L LK+
Sbjct: 96 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKL 152
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 153 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 212 HDEEIIGGQVFFRQ----------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 129 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 185
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 245 HDEEIIGGQVFFRQ----------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 129 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 185
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 245 HDEEIIGGQVFFRQ----------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 129 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 185
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 245 HDEEIIGGQVFFRQ----------RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L + + GG L D + E + + L + F H V+HR
Sbjct: 83 LDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLHSNQVIHR 140
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHR-SYNVEG 123
D+K +N L D +K+ DFG + P+Q + + +VG+ Y++APEV+ R +Y +
Sbjct: 141 DIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 124 DMWSIGVITYILLCGSRPFWARTE-SGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G++ ++ G P+ ++ P + +S +DF+ R L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLE 255
Query: 183 KDHRKRMTAAQALTHPWL 200
D KR +A + L H +L
Sbjct: 256 MDVEKRGSAKELLQHQFL 273
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 129 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 185
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 186 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 245 HDEEIIGGQVFFRQ----------RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKV 85
+L D I RG EE A++ ++L V CH GV+HRD+K EN L + LK+
Sbjct: 128 DLFDFITERGA-LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKL 184
Query: 86 IDFGLSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFW 143
IDFG ++ D D G+ Y PE + HR + +WS+G++ Y ++CG PF
Sbjct: 185 IDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
Query: 144 ARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
E + R VS E + +R L R T + HPW+ D
Sbjct: 244 HDEEIIGGQVFFRQ----------RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 12 SNSFLFFT-RFCEGGELLDRILSRGGR---YLEED-AKTIVEKILNIVAFCHLQG----- 61
+N+ L+ +CEGG+L ++++G + YL+E+ ++ ++ + CH +
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SY 119
V+HRDLKP N ++ +K+ DFGL+ + D VG+ YY++PE ++R SY
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
N + D+WS+G + Y L PF A ++ + + + F P+ S E + + R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITR 250
Query: 180 LLNKDHRKRMTAAQALTHPWL 200
+LN R + + L +P +
Sbjct: 251 MLNLKDYHRPSVEEILENPLI 271
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDHTGFLTEYV 190
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVI--------------------TYILLCGSRPF 142
+ +Y APE++ + Y D+WS+G I +IL P
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 143 WARTESGI---FRSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
GI R+ L + P+ + PW P+ +A D + ++L + KR+ QAL
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 196 THPWL 200
HP+L
Sbjct: 311 AHPYL 315
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 12 SNSFLFFT-RFCEGGELLDRILSRGGR---YLEED-AKTIVEKILNIVAFCHLQG----- 61
+N+ L+ +CEGG+L ++++G + YL+E+ ++ ++ + CH +
Sbjct: 78 TNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVLHR-SY 119
V+HRDLKP N ++ +K+ DFGL+ + D VG+ YY++PE ++R SY
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
N + D+WS+G + Y L PF A ++ + + + F P+ S E + + R
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI--REGKFRRIPY-RYSDELNEIITR 250
Query: 180 LLNKDHRKRMTAAQALTHPWL 200
+LN R + + L +P +
Sbjct: 251 MLNLKDYHRPSVEEILENPLI 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + GG LD L + G E TI+ +IL + + H + +HRD+K N
Sbjct: 89 STKLWIIMEYLGGGSALD--LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAAN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIG 129
L + E +K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ + D+WS+G
Sbjct: 147 VLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLG 203
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRADP----NFHDSPWPSVSPEAKDFVRRLLNKDH 185
+ L G P + + + P H P+ K+FV LNKD
Sbjct: 204 ITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPF-------KEFVEACLNKDP 256
Query: 186 RKRMTAAQALTHPWL 200
R R TA + L H ++
Sbjct: 257 RFRPTAKELLKHKFI 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 20 RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREE 79
+ GG LD L R G + E T++++IL + + H + +HRD+K N L + E
Sbjct: 101 EYLGGGSALD--LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---E 155
Query: 80 DAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLC 137
+K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ + D+WS+G+ L
Sbjct: 156 QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK 215
Query: 138 GSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTH 197
G P ++ R + N + + K+F+ LNKD R TA + L H
Sbjct: 216 GEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKH 272
Query: 198 PWL 200
++
Sbjct: 273 KFI 275
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 143
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 144 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHY 199
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS--VSPEAKDFV 177
+V+ D+WS+G+ + G P + + S +L N PS S E +DFV
Sbjct: 200 SVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 259
Query: 178 RRLLNKDHRKRMTAAQALTHPWL 200
+ L K+ +R Q + H ++
Sbjct: 260 NKCLIKNPAERADLKQLMVHAFI 282
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 213
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPF--------------------- 142
+ +Y APE++ YN+ D+WS+G I LL G F
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA 273
Query: 143 --WARTESGIFRSVLRADP-----NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
+R S R+ + + P NF D + +P A D + ++L D KR+TA++AL
Sbjct: 274 SVISRMPSHEARNYINSLPQMPKRNFADV-FIGANPLAVDLLEKMLVLDTDKRITASEAL 332
Query: 196 THPWLHDENRP 206
HP+ + P
Sbjct: 333 AHPYFSQYHDP 343
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L + + GG L D + E + + L + F H V+HR
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHR-SYNVEG 123
D+K +N L D +K+ DFG + P+Q + + +VG+ Y++APEV+ R +Y +
Sbjct: 142 DIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 124 DMWSIGVITYILLCGSRPFWARTE-SGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G++ ++ G P+ ++ P + +S +DF+ R L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLE 256
Query: 183 KDHRKRMTAAQALTHPWL 200
D KR +A + + H +L
Sbjct: 257 MDVEKRGSAKELIQHQFL 274
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 6 LQHLFYSNSFLFFTRFCEGGEL---LDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGV 62
LQ L ++ L +CEGG+L L++ + G E +T++ I + + + H +
Sbjct: 84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLSDISSALRYLHENRI 142
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNV 121
+HRDLKPEN + + K+ID G + + + + VG+ Y+APE+L + Y V
Sbjct: 143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTV 202
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFH 162
D WS G + + + G RPF + + +R N H
Sbjct: 203 TVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 243
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 6 LQHLFYSNSFLFFTRFCEGGEL---LDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGV 62
LQ L ++ L +CEGG+L L++ + G E +T++ I + + + H +
Sbjct: 85 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG-LKEGPIRTLLSDISSALRYLHENRI 143
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNV 121
+HRDLKPEN + + K+ID G + + + + VG+ Y+APE+L + Y V
Sbjct: 144 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTV 203
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFH 162
D WS G + + + G RPF + + +R N H
Sbjct: 204 TVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 244
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 10/159 (6%)
Query: 3 HQKLQHLF----YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCH 58
H L LF + F F GG+L+ I + R+ E A+ +I++ + F H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEIISALMFLH 141
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLHR 117
+G+++RDLK +N L + + K+ DFG+ + + G+ Y+APE+L
Sbjct: 142 DKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE 198
Query: 118 S-YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVL 155
Y D W++GV+ Y +LCG PF A E +F ++L
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL 237
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
E+ + +V ++L + + H G++HRDLKP N ED LK++DFGL+ + D
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLAR--QADSE 181
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSR----------------- 140
+ V + +Y APEV+ Y D+WS+G I ++ G
Sbjct: 182 MXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKV 241
Query: 141 ------PFWARTESGIFRSVLRADPNFHDSPWPSV----SPEAKDFVRRLLNKDHRKRMT 190
F R +S ++ ++ P + S+ SP A + + ++L D +R+T
Sbjct: 242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT 301
Query: 191 AAQALTHPW---LHD-ENRP 206
A +AL HP+ LHD E+ P
Sbjct: 302 AGEALAHPYFESLHDTEDEP 321
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F + L+F + GG+L+ I + G++ E A +I + F H +G++
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAAEISIGLFFLHKRGII 142
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNV 121
+RDLK +N + + + +K+ DFG+ + + + G+ Y+APE++ ++ Y
Sbjct: 143 YRDLKLDNVMLDS---EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWP-SVSPEAKDFVRRL 180
D W+ GV+ Y +L G PF E +F+S++ H+ +P S+S EA + L
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME-----HNVSYPKSLSKEAVSICKGL 254
Query: 181 LNKDHRKRMTAA 192
+ K KR+
Sbjct: 255 MTKHPAKRLGCG 266
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 188
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 247
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 195 LTHPWL 200
L HP+L
Sbjct: 308 LAHPYL 313
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 42 DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR-PDQRL 100
+ K + ++L +A+CH Q V+HRDLKP+N L R E LK+ DFGL+ P +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTY 157
Query: 101 NDIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD 158
++ V + +Y P++L S Y+ + DMW +G I Y + G F T + R
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 159 PNFHDSPWPSV--------------------------SPEAKDFVRRLLNKDHRKRMTAA 192
+ WP + + D + +LL + R R++A
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE 277
Query: 193 QALTHPW 199
A+ HP+
Sbjct: 278 DAMKHPF 284
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
+E + +V ++L + + H G++HRDLKP N ED+ L+++DFGL+ + D+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLAR--QADEE 184
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPF--------------- 142
+ V + +Y APE++ YN D+WS+G I LL G F
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
Query: 143 --------WARTESGIFRSVLRADPNFHDSPWPSV----SPEAKDFVRRLLNKDHRKRMT 190
A+ S R+ +++ P S+ +P A D + R+L D +R++
Sbjct: 245 VGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVS 304
Query: 191 AAQALTHPWLHDENRP 206
AA+AL H + + P
Sbjct: 305 AAEALAHAYFSQYHDP 320
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 188
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 247
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 195 LTHPWL 200
L HP+L
Sbjct: 308 LAHPYL 313
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 34/196 (17%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
+E + +V ++L + + H G++HRDLKP N ED+ L+++DFGL+ + D+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDSELRILDFGLAR--QADEE 184
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPF--------------- 142
+ V + +Y APE++ YN D+WS+G I LL G F
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 244
Query: 143 --------WARTESGIFRSVLRADPNFHDSPWPSV----SPEAKDFVRRLLNKDHRKRMT 190
A+ S R+ +++ P S+ +P A D + R+L D +R++
Sbjct: 245 VGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVS 304
Query: 191 AAQALTHPWLHDENRP 206
AA+AL H + + P
Sbjct: 305 AAEALAHAYFSQYHDP 320
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYV 208
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 267
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 195 LTHPWL 200
L HP+L
Sbjct: 328 LAHPYL 333
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 247
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 248 SQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 195 LTHPWL 200
L HP+L
Sbjct: 308 LAHPYL 313
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 28/203 (13%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 127
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D+ N+ VG+ Y++PE L + Y
Sbjct: 128 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHY 183
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSV--SPEAKDFV 177
+V+ D+WS+G+ + G P R IF +L N PS S E +DFV
Sbjct: 184 SVQSDIWSMGLSLVEMAVGRYP---RPPMAIFE-LLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 178 RRLLNKDHRKRMTAAQALTHPWL 200
+ L K+ +R Q + H ++
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFI 262
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 255
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 256 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 315
Query: 195 LTHPWL 200
L HP+L
Sbjct: 316 LAHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 247
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 195 LTHPWL 200
L HP+L
Sbjct: 308 LAHPYL 313
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 245
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 246 EQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 195 LTHPWL 200
L HP+L
Sbjct: 306 LAHPYL 311
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 252
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 195 LTHPWL 200
L HP+L
Sbjct: 313 LAHPYL 318
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 34/196 (17%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
+E + +V ++L + + H G++HRDLKP N ED L+++DFGL+ + D+
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN---EDCELRILDFGLAR--QADEE 176
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPF--------------- 142
+ V + +Y APE++ YN D+WS+G I LL G F
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEV 236
Query: 143 --------WARTESGIFRSVLRADPNFHDSPWPSV----SPEAKDFVRRLLNKDHRKRMT 190
A+ S R+ +++ P S+ +P A D + R+L D +R++
Sbjct: 237 VGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVS 296
Query: 191 AAQALTHPWLHDENRP 206
AA+AL H + + P
Sbjct: 297 AAEALAHAYFSQYHDP 312
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 253
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 254 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 313
Query: 195 LTHPWL 200
L HP+L
Sbjct: 314 LAHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 244
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 245 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 304
Query: 195 LTHPWL 200
L HP+L
Sbjct: 305 LAHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 245
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 246 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 305
Query: 195 LTHPWL 200
L HP+L
Sbjct: 306 LAHPYL 311
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 247
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 248 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 307
Query: 195 LTHPWL 200
L HP+L
Sbjct: 308 LAHPYL 313
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T + LK+ DFGL+ PD L + V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYV 190
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 249
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 195 LTHPWL 200
L HP+L
Sbjct: 310 LAHPYL 315
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 249
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 250 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 309
Query: 195 LTHPWL 200
L HP+L
Sbjct: 310 LAHPYL 315
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
L + + GG L D + E + + L + F H V+HR
Sbjct: 84 LDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQVIHR 141
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHR-SYNVEG 123
++K +N L D +K+ DFG + P+Q + + +VG+ Y++APEV+ R +Y +
Sbjct: 142 NIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 124 DMWSIGVITYILLCGSRPFWARTE-SGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G++ ++ G P+ ++ P + +S +DF+ R L
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLE 256
Query: 183 KDHRKRMTAAQALTHPWL 200
D KR +A + + H +L
Sbjct: 257 MDVEKRGSAKELIQHQFL 274
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 267
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 268 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 327
Query: 195 LTHPWL 200
L HP+L
Sbjct: 328 LAHPYL 333
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 32/202 (15%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+CE L D I S ++ + +IL +++ H QG++HRDLKP N +E
Sbjct: 96 YCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DES 152
Query: 81 APLKVIDFGLS-------DFVRPDQR--------LNDIVGSAYYVAPEVLHRS--YNVEG 123
+K+ DFGL+ D ++ D + L +G+A YVA EVL + YN +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI 212
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-----DPNFHDSPWPSVSPEAKDFVR 178
DM+S+G+I + ++ PF E LR+ P+F D+ K +R
Sbjct: 213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV----EKKIIR 265
Query: 179 RLLNKDHRKRMTAAQALTHPWL 200
L++ D KR A L WL
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 251
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 195 LTHPWL 200
L HP+L
Sbjct: 312 LAHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 38/186 (20%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ PD L + V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 252
Query: 152 -------------RSVLRADPNFHDSPW----PSVSPEAKDFVRRLLNKDHRKRMTAAQA 194
R+ L + P+ + PW P+ +A D + ++L + KR+ QA
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 195 LTHPWL 200
L HP+L
Sbjct: 313 LAHPYL 318
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 10/183 (5%)
Query: 20 RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREE 79
+ GG LD L G E TI+ +IL + + H + +HRD+K N L + E
Sbjct: 105 EYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---E 159
Query: 80 DAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLC 137
+K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ + D+WS+G+ L
Sbjct: 160 HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 219
Query: 138 GSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTH 197
G P + + + +P + + S K+FV LNK+ R TA + L H
Sbjct: 220 GEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKH 276
Query: 198 PWL 200
++
Sbjct: 277 KFI 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 11 YSNSFLFFTR------FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
Y S+L T+ + GG LD L G E TI+ +IL + + H + +H
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIH 142
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVE 122
RD+K N L + E +K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ +
Sbjct: 143 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G+ L G P + + + +P + + S K+FV LN
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEACLN 256
Query: 183 KDHRKRMTAAQALTHPWL 200
K+ R TA + L H ++
Sbjct: 257 KEPSFRPTAKELLKHKFI 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 11 YSNSFLFFTR------FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
Y S+L T+ + GG LD L G E TI+ +IL + + H + +H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIH 127
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVE 122
RD+K N L + E +K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ +
Sbjct: 128 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G+ L G P + + + +P + + S K+FV LN
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEACLN 241
Query: 183 KDHRKRMTAAQALTHPWL 200
K+ R TA + L H ++
Sbjct: 242 KEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 11 YSNSFLFFTR------FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
Y S+L T+ + GG LD L G E TI+ +IL + + H + +H
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALD--LLEPGPLDETQIATILREILKGLDYLHSEKKIH 127
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSAYYVAPEVLHRS-YNVE 122
RD+K N L + E +K+ DFG++ + Q + N VG+ +++APEV+ +S Y+ +
Sbjct: 128 RDIKAANVLLS---EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 123 GDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLN 182
D+WS+G+ L G P + + + +P + + S K+FV LN
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEACLN 241
Query: 183 KDHRKRMTAAQALTHPWL 200
K+ R TA + L H ++
Sbjct: 242 KEPSFRPTAKELLKHKFI 259
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F + L+F + GG+L+ I + GR+ E A +I + F +G++
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKGII 143
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNV 121
+RDLK +N + + + +K+ DFG+ + + G+ Y+APE++ ++ Y
Sbjct: 144 YRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 200
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWP-SVSPEAKDFVRRL 180
D W+ GV+ Y +L G PF E +F+S++ H+ +P S+S EA + L
Sbjct: 201 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-----HNVAYPKSMSKEAVAICKGL 255
Query: 181 LNKDHRKRMTAA 192
+ K KR+
Sbjct: 256 MTKHPGKRLGCG 267
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL----- 115
GV+HRD+KP N L R + +K+ DFG+S + D+ + G A Y+APE +
Sbjct: 145 GVIHRDVKPSNILLDERGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 116 -HRSYNVEGDMWSIGVITYILLCGSRPFW-ARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
Y++ D+WS+G+ L G P+ +T+ + VL+ +P S +
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDF 260
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWL 200
+ FV+ L KDHRKR + L H ++
Sbjct: 261 QSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE----------EDAPLKVIDFG 89
E + +++ +I + VA H ++HRDLKP+N L +T E+ + + DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 90 LSDFVRPDQ-----RLNDIVGSAYYVAPEVLHRSYNVEG--------DMWSIG-VITYIL 135
L + Q LN+ G++ + APE+L S N++ D++S+G V YIL
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 136 LCGSRPFWAR--TESGIFRSVLRAD--PNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
G PF + ES I R + D HD S+ EA D + ++++ D KR TA
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDR---SLIAEATDLISQMIDHDPLKRPTA 290
Query: 192 AQALTHP 198
+ L HP
Sbjct: 291 MKVLRHP 297
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE----------EDAPLKVIDFG 89
E + +++ +I + VA H ++HRDLKP+N L +T E+ + + DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 90 LSDFVRPDQ-----RLNDIVGSAYYVAPEVLHRSYNVEG--------DMWSIG-VITYIL 135
L + Q LN+ G++ + APE+L S N++ D++S+G V YIL
Sbjct: 174 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 136 LCGSRPFWAR--TESGIFRSVLRADPN--FHDSPWPSVSPEAKDFVRRLLNKDHRKRMTA 191
G PF + ES I R + D HD S+ EA D + ++++ D KR TA
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDR---SLIAEATDLISQMIDHDPLKRPTA 290
Query: 192 AQALTHP 198
+ L HP
Sbjct: 291 MKVLRHP 297
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ + YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F + L+F + GG+L+ I + GR+ E A +I + F +G++
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFFLQSKGII 464
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNV 121
+RDLK +N + + + +K+ DFG+ + + G+ Y+APE++ ++ Y
Sbjct: 465 YRDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGK 521
Query: 122 EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWP-SVSPEAKDFVRRL 180
D W+ GV+ Y +L G PF E +F+S++ H+ +P S+S EA + L
Sbjct: 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME-----HNVAYPKSMSKEAVAICKGL 576
Query: 181 LNKDHRKRMTAA 192
+ K KR+
Sbjct: 577 MTKHPGKRLGCG 588
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED+ LK++DFGL+ D + V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHT--DDEMTGYVA 186
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 40/189 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAP---LKVIDFGLSDFVRPDQRLNDIVG 105
++L +A+ H G+ HRD+KP+N L D P LK+IDFG + + + +
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLL-----DPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 106 SAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFR----------- 152
S YY APE++ +Y D+WS G + L+ G F ESGI +
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG--ESGIDQLVEIIKVLGTP 261
Query: 153 ---SVLRADPNFHDSPWPSV-------------SPEAKDFVRRLLNKDHRKRMTAAQALT 196
+ +PN+ + +P + P+A D + RLL R+TA +AL
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 197 HPWLHDENR 205
HP+ DE R
Sbjct: 322 HPFF-DELR 329
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L F + S LFF + GG+L+ + R + EE A+ +I + + H +G+++
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RDLK +N L + + +K+ D+G+ + +RP + G+ Y+APE+L Y
Sbjct: 145 RDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 123 GDMWSIGVITYILLCGSRPF---------WARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
D W++GV+ + ++ G PF TE +F+ +L S+S +A
Sbjct: 202 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKA 257
Query: 174 KDFVRRLLNKDHRKRMTA------AQALTHPWLHDENRPVPLDILIYKLV 217
++ LNKD ++R+ A HP+ R V D++ K V
Sbjct: 258 ASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF----RNVDWDMMEQKQV 303
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L F + S LFF + GG+L+ + R + EE A+ +I + + H +G+++
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RDLK +N L + + +K+ D+G+ + +RP + G+ Y+APE+L Y
Sbjct: 177 RDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 123 GDMWSIGVITYILLCGSRPF---------WARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
D W++GV+ + ++ G PF TE +F+ +L S+S +A
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 289
Query: 174 KDFVRRLLNKDHRKRMTA------AQALTHPWLHDENRPVPLDILIYKLV 217
++ LNKD ++R+ A HP+ R V D++ K V
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF----RNVDWDMMEQKQV 335
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED+ LK++DFGL+ D + V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLARHT--DDEMTGYVA 190
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 52/211 (24%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGL--------SDFVRPDQ 98
+ + L V H V+HRDLKP N L + + LKV DFGL +D P
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 99 R---LNDIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWAR-------- 145
+ + + V + +Y APEV+ S Y+ D+WS G I L F R
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 146 ----------------TESGIFRSVLRADPNFHDSP----WPSVSPEAKDFVRRLLNKDH 185
ES R +++ P + +P +P V+P+ D ++R+L D
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 186 RKRMTAAQALTHPWL---HDEN-----RPVP 208
KR+TA +AL HP+L HD N P+P
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 31/187 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K+ + ++L +AFCH V+HRDLKP+N L T + +K+ DFGL+ F P +
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXH 162
Query: 103 IVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESG----IFRSVLR 156
V + +Y APE+L + Y+ D+WS+G I ++ F +E IFR++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 157 AD----------PNFHDS--PW---------PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
D P++ S W P + + + + ++L+ D KR++A AL
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 196 THPWLHD 202
HP+ D
Sbjct: 283 AHPFFQD 289
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 195
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 34 RGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDF 93
+ + ++ + ++ +IL + + H ++HRDLKP N ED+ LK++DFGL
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDSELKILDFGLCRH 174
Query: 94 VRPDQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIF 151
D + V + +Y APE++ YN D+WS+G I LL G F
Sbjct: 175 T--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 152 RSVLR--ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNK 183
+ +LR P NF + + +P A D + ++L
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVL 291
Query: 184 DHRKRMTAAQALTHPWL---HD-ENRPV 207
D KR+TAAQAL H + HD ++ PV
Sbjct: 292 DSDKRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 40/210 (19%)
Query: 32 LSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS 91
+ + + ++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+
Sbjct: 112 IVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLA 168
Query: 92 DFVRPDQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESG 149
D + V + +Y APE++ YN D+WS+G I LL G F
Sbjct: 169 RHT--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 150 IFRSVLR--ADP--------------------------NFHDSPWPSVSPEAKDFVRRLL 181
+ +LR P NF + + +P A D + ++L
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKML 285
Query: 182 NKDHRKRMTAAQALTHPWL---HD-ENRPV 207
D KR+TAAQAL H + HD ++ PV
Sbjct: 286 VLDSDKRITAAQALAHAYFAQYHDPDDEPV 315
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 34/228 (14%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L + +S+ L FC+ +L S G E K+ + ++L + FCH + V+
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVL--HRSYN 120
HRDLKP+N L E LK+ DFGL+ F P + + V + +Y P+VL + Y+
Sbjct: 124 HRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYS 180
Query: 121 VEGDMWSIGVITYILLCGSRPFWARTE-----SGIFRSV----------LRADPNFHDSP 165
DMWS G I L +RP + + IFR + + P++ P
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYP 240
Query: 166 W-----------PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
P ++ +D ++ LL + +R++A +AL HP+ D
Sbjct: 241 MYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 196
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 196
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L F + S LFF + GG+L+ + R + EE A+ +I + + H +G+++
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RDLK +N L + + +K+ D+G+ + +RP + G+ Y+APE+L Y
Sbjct: 130 RDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 123 GDMWSIGVITYILLCGSRPF---------WARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
D W++GV+ + ++ G PF TE +F+ +L S+S +A
Sbjct: 187 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 242
Query: 174 KDFVRRLLNKDHRKRMTA------AQALTHPWLHDENRPVPLDILIYKLV 217
++ LNKD ++R+ A HP+ R V D++ K V
Sbjct: 243 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF----RNVDWDMMEQKQV 288
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 124
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 180
Query: 120 NVEGDMWSIGVITYILLCGSRPFW---ARTESGIFRSVLRADPNFHDSPWPSV-----SP 171
+V+ D+WS+G+ + G P A+ +S ++ + P P + S
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 240
Query: 172 EAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
E +DFV + L K+ +R Q + H ++
Sbjct: 241 EFQDFVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 52/211 (24%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGL--------SDFVRPDQ 98
+ + L V H V+HRDLKP N L + + LKV DFGL +D P
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 99 R---LNDIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWAR-------- 145
+ + + V + +Y APEV+ S Y+ D+WS G I L F R
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 146 ----------------TESGIFRSVLRADPNFHDSP----WPSVSPEAKDFVRRLLNKDH 185
ES R +++ P + +P +P V+P+ D ++R+L D
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 186 RKRMTAAQALTHPWL---HDEN-----RPVP 208
KR+TA +AL HP+L HD N P+P
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 190
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 251 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 196
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 256
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 257 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
N+ + GG+LL + R EE A+ + +++ + H VHRD+KP+N
Sbjct: 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNI 206
Query: 73 LFTTREEDAPLKVIDFGLSDFVRPDQRLND--IVGSAYYVAPEVLHR------SYNVEGD 124
L + + +++ DFG + D + VG+ Y++PE+L Y E D
Sbjct: 207 LM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD 263
Query: 125 MWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFH-DSPWPSVSPEAKDFVRRLL-N 182
WS+GV Y +L G PF+A + + ++ F + VS AKD +RRL+ +
Sbjct: 264 WWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS 323
Query: 183 KDHR 186
++HR
Sbjct: 324 REHR 327
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 52/211 (24%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN----- 101
+ + L V H V+HRDLKP N L + + LKV DFGL+ + N
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 102 ------DIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWAR-------- 145
+ V + +Y APEV+ S Y+ D+WS G I L F R
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234
Query: 146 ----------------TESGIFRSVLRADPNFHDSP----WPSVSPEAKDFVRRLLNKDH 185
ES R +++ P + +P +P V+P+ D ++R+L D
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294
Query: 186 RKRMTAAQALTHPWL---HDEN-----RPVP 208
KR+TA +AL HP+L HD N P+P
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPEGEPIP 325
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 40/205 (19%)
Query: 37 RYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP 96
+ ++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+
Sbjct: 121 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT-- 175
Query: 97 DQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSV 154
D + V + +Y APE++ YN D+WS+G I LL G F + +
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 235
Query: 155 LR--ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHR 186
LR P NF + + +P A D + ++L D
Sbjct: 236 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSD 294
Query: 187 KRMTAAQALTHPWL---HD-ENRPV 207
KR+TAAQAL H + HD ++ PV
Sbjct: 295 KRITAAQALAHAYFAQYHDPDDEPV 319
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 186
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 183
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 243
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 244 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 302
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 303 TAAQALAHAYFAQYHDPDDEPV 324
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 42/201 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV--PLD 210
H + HD ++ PV P D
Sbjct: 304 AHAYFAQYHDPDDEPVADPFD 324
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHT--DDEMTGYVA 195
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 255
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 256 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 191
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 186
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 207
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 178
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 238
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 239 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 297
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 298 TAAQALAHAYFAQYHDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 189
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 183
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 243
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 244 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 303 AHAYFAQYHDPDDEPV 318
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMXGYVA 207
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 267
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 268 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 30/230 (13%)
Query: 6 LQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
L F + S LFF + GG+L+ + R + EE A+ +I + + H +G+++
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFH-MQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGL-SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVE 122
RDLK +N L + + +K+ D+G+ + +RP + G+ Y+APE+L Y
Sbjct: 134 RDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 123 GDMWSIGVITYILLCGSRPF---------WARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
D W++GV+ + ++ G PF TE +F+ +L S+S +A
Sbjct: 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKA 246
Query: 174 KDFVRRLLNKDHRKRMTA------AQALTHPWLHDENRPVPLDILIYKLV 217
++ LNKD ++R+ A HP+ R V D++ K V
Sbjct: 247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF----RNVDWDMMEQKQV 292
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 122 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 176
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 236
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 237 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 295
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 296 TAAQALAHAYFAQYHDPDDEPV 317
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 204
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 265 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 186
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 246
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 247 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 203
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 264 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHT--DDEMTGYVA 189
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDXELKILDFGLARHT--DDEMTGYVA 189
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 249
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 250 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 174
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 293
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 175
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 236 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 294
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 295 TAAQALAHAYFAQYHDPDDEPV 316
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 194
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 254
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 255 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 314 AHAYFAQYHDPDDEPV 329
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 204
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 264
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 265 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 149 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 203
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 263
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 264 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 184
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 244
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 245 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 303
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 304 TAAQALAHAYFAQYHDPDDEPV 325
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMAGFVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 175
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 235
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 236 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 294
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 295 TAAQALAHAYFAQYHDPDDEPV 316
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMAGFVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 174
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 293
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 24 GGELLDRILSRGGRYLEED-AKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAP 82
GG+LL +LS+ L ED A+ + +++ + H VHRD+KP+N L +
Sbjct: 174 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGH 229
Query: 83 LKVIDFGLSDFVRPDQRLND--IVGSAYYVAPEVLHR------SYNVEGDMWSIGVITYI 134
+++ DFG + D + VG+ Y++PE+L Y E D WS+GV Y
Sbjct: 230 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 135 LLCGSRPFWARTESGIFRSVLRADPNFH-DSPWPSVSPEAKDFVRRLLNKDHRK 187
+L G PF+A + + ++ + F S VS EAKD ++RL+ R+
Sbjct: 290 MLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERR 343
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 24 GGELLDRILSRGGRYLEED-AKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAP 82
GG+LL +LS+ L ED A+ + +++ + H VHRD+KP+N L +
Sbjct: 158 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGH 213
Query: 83 LKVIDFGLSDFVRPDQRLND--IVGSAYYVAPEVLHR------SYNVEGDMWSIGVITYI 134
+++ DFG + D + VG+ Y++PE+L Y E D WS+GV Y
Sbjct: 214 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 135 LLCGSRPFWARTESGIFRSVLRADPNFH-DSPWPSVSPEAKDFVRRLLNKDHRK 187
+L G PF+A + + ++ + F S VS EAKD ++RL+ R+
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERR 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 40/205 (19%)
Query: 37 RYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP 96
+ ++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+
Sbjct: 141 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT-- 195
Query: 97 DQRLNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSV 154
D + V + +Y APE++ YN D+WS+G I LL G F + +
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 255
Query: 155 LR--ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHR 186
LR P NF + + +P A D + ++L D
Sbjct: 256 LRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSD 314
Query: 187 KRMTAAQALTHPWL---HD-ENRPV 207
KR+TAAQAL H + HD ++ PV
Sbjct: 315 KRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ D + V
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDEMTGYVA 190
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 250
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 251 ELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L F ++L+ + GG+LL + G R E A+ + +I+ + H G V
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYV 184
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI--VGSAYYVAPEVLHRSYNV 121
HRD+KP+N L + +++ DFG +R D + + VG+ Y++PE+L
Sbjct: 185 HRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 122 --------EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFH----DSPWPSV 169
E D W++GV Y + G PF+A + + + ++ + D V
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDE---GV 298
Query: 170 SPEAKDFVRRLLNKDHRK--RMTAAQALTHPWL 200
EA+DF++RLL + R A THP+
Sbjct: 299 PEEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 40/202 (19%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
++ + ++ +IL + + H ++HRDLKP N ED LK++DFGL+ D
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHT--DDE 174
Query: 100 LNDIVGSAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR- 156
+ V + +Y APE++ YN D+WS+G I LL G F + +LR
Sbjct: 175 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL 234
Query: 157 -ADP--------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
P NF + + +P A D + ++L D KR+
Sbjct: 235 VGTPGAELLKKISSESARNYIQSLAQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRI 293
Query: 190 TAAQALTHPWL---HD-ENRPV 207
TAAQAL H + HD ++ PV
Sbjct: 294 TAAQALAHAYFAQYHDPDDEPV 315
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ + L + F H +VHRDLKPEN L T+ +K+ DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 101 NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVI------TYILLCGSRPF----------- 142
+ +V + +Y APEVL +S Y DMWS+G I L CG+
Sbjct: 169 DPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 143 ------WARTES---GIFRSVLRADPNFHDSPWPSVSPEAKD----FVRRLLNKDHRKRM 189
W R S G F P P SV PE ++ + +L + KR+
Sbjct: 229 LPPEDDWPRDVSLPRGAF-------PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI 281
Query: 190 TAAQALTHPWLH-DENRP 206
+A +AL H +LH DE P
Sbjct: 282 SAFRALQHSYLHKDEGNP 299
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-H 116
H + +V+RDLKPEN L ++ +++ D GL+ V Q + VG+ Y+APEV+ +
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y D W++G + Y ++ G PF R + V R + SP+A+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSL 419
Query: 177 VRRLLNKDHRKRM-----TAAQALTHPWLHDEN 204
+LL KD +R+ +A + HP N
Sbjct: 420 CSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR----LNDIV 104
+IL + + H V+HRDLKP N L T LK+ DFGL+ P+ L + V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLINT---TCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 105 GSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTES--------GIF--- 151
+ +Y APE++ + Y D+WS+G I +L +RP + GI
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHYLDQLNHILGILGSP 267
Query: 152 -------------RSVLRADPNFHDSPWPSVSP----EAKDFVRRLLNKDHRKRMTAAQA 194
R+ L++ P+ W + P +A D + R+L + KR+T +A
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEA 327
Query: 195 LTHPWLHDENRPV 207
L HP+L P
Sbjct: 328 LAHPYLEQYYDPT 340
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 3 HQKLQHL--------FYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTI---VEKI 50
H+ L+H F N F+ F GG L + S+ G L+++ +TI ++I
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-LKDNEQTIGFYTKQI 131
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
L + + H +VHRD+K +N L T LK+ DFG S +RL I
Sbjct: 132 LEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTS------KRLAGINPCTETF 183
Query: 104 VGSAYYVAPEVLH---RSYNVEGDMWSIGVITYILLCGSRPFW--ARTESGIFR-SVLRA 157
G+ Y+APE++ R Y D+WS+G + G PF+ ++ +F+ + +
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 243
Query: 158 DPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
P + S+S EAK F+ + D KR A L +L
Sbjct: 244 HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 38/223 (17%)
Query: 3 HQKLQHL--------FYSNSFL-FFTRFCEGGELLDRILSRGGRYLEEDAKTI---VEKI 50
H+ L+H F N F+ F GG L + S+ G L+++ +TI ++I
Sbjct: 59 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-LKDNEQTIGFYTKQI 117
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
L + + H +VHRD+K +N L T LK+ DFG S +RL I
Sbjct: 118 LEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTS------KRLAGINPCTETF 169
Query: 104 VGSAYYVAPEVLH---RSYNVEGDMWSIGVITYILLCGSRPFW--ARTESGIFR-SVLRA 157
G+ Y+APE++ R Y D+WS+G + G PF+ ++ +F+ + +
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV 229
Query: 158 DPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
P + S+S EAK F+ + D KR A L +L
Sbjct: 230 HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-H 116
H + +V+RDLKPEN L ++ +++ D GL+ V Q + VG+ Y+APEV+ +
Sbjct: 303 HRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y D W++G + Y ++ G PF R + V R + SP+A+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSL 419
Query: 177 VRRLLNKDHRKRM-----TAAQALTHPWLHDEN 204
+LL KD +R+ +A + HP N
Sbjct: 420 CSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ + L + F H +VHRDLKPEN L T+ +K+ DFGL+ L
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 176
Query: 101 NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVI------TYILLCGSRPF----------- 142
+V + +Y APEVL +S Y DMWS+G I L CG+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 236
Query: 143 ------WARTES---GIFRSVLRADPNFHDSPWPSVSPEAKD----FVRRLLNKDHRKRM 189
W R S G F P P SV PE ++ + +L + KR+
Sbjct: 237 LPPEDDWPRDVSLPRGAF-------PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI 289
Query: 190 TAAQALTHPWLH-DENRP 206
+A +AL H +LH DE P
Sbjct: 290 SAFRALQHSYLHKDEGNP 307
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++D+GL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDYGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ + L + F H +VHRDLKPEN L T+ +K+ DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 101 NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVI------TYILLCGSRPF----------- 142
+V + +Y APEVL +S Y DMWS+G I L CG+
Sbjct: 169 APVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 143 ------WARTES---GIFRSVLRADPNFHDSPWPSVSPEAKD----FVRRLLNKDHRKRM 189
W R S G F P P SV PE ++ + +L + KR+
Sbjct: 229 LPPEDDWPRDVSLPRGAF-------PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI 281
Query: 190 TAAQALTHPWLH-DENRP 206
+A +AL H +LH DE P
Sbjct: 282 SAFRALQHSYLHKDEGNP 299
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFC------HLQG---VVHRDLKPENFLFTT 76
EL+D L + + + + +TI E IL +A HL V+HRD+KP N L
Sbjct: 86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 145
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-----RSYNVEGDMWSIGVI 131
+ +K+ DFG+S ++ D + G Y+APE ++ + Y+V+ D+WS+G+
Sbjct: 146 LGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202
Query: 132 TYILLCGSRPF--WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
L P+ W + + V P P S E DF + L K+ ++R
Sbjct: 203 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFVDFTSQCLKKNSKERP 259
Query: 190 TAAQALTHPW--LHD 202
T + + HP+ LH+
Sbjct: 260 TYPELMQHPFFTLHE 274
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 32 LSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS 91
+ R R E A I ++++ V + L+ ++HRD+K EN + ED +K+IDFG +
Sbjct: 121 IDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSA 177
Query: 92 DFVRPDQRLNDIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESG 149
++ + G+ Y APEVL + E +MWS+GV Y L+ PF E+
Sbjct: 178 AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET- 236
Query: 150 IFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPL 209
+ H P VS E V LL +R T + +T PW+ +PV L
Sbjct: 237 -------VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV---TQPVNL 284
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 24/181 (13%)
Query: 44 KTIVEKILNIVAFCHLQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLND 102
K I++ +LN ++ H + + HRD+KP N L +++ +K+ DFG S+++ D+++
Sbjct: 154 KCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYM-VDKKIKG 209
Query: 103 IVGSAYYVAPEVL--HRSYN-VEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-- 157
G+ ++ PE SYN + D+WS+G+ Y++ PF + + +R
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN 269
Query: 158 -----DPNFHDSPWPS---------VSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDE 203
D N P + +S E DF++ L K+ +R+T+ AL H WL D
Sbjct: 270 IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329
Query: 204 N 204
N
Sbjct: 330 N 330
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 33 SRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS- 91
S G E K+ + ++L + FCH + V+HRDLKP+N L E LK+ +FGL+
Sbjct: 93 SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE---LKLANFGLAR 149
Query: 92 DFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTE-- 147
F P + + V + +Y P+VL + Y+ DMWS G I L RP + +
Sbjct: 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209
Query: 148 ---SGIFRSV----------LRADPNFHDSPW-----------PSVSPEAKDFVRRLLNK 183
IFR + + P++ P P ++ +D ++ LL
Sbjct: 210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKC 269
Query: 184 DHRKRMTAAQALTHPWLHD 202
+ +R++A +AL HP+ D
Sbjct: 270 NPVQRISAEEALQHPYFSD 288
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 50 ILNIVAFCHLQ---GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGS 106
+ + A HL+ ++HRD+KP N L + +K+ DFG+S + G
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 107 AYYVAPEVLHRS-----YNVEGDMWSIGVITYILLCGSRPF--WARTESGIFRSVLRADP 159
Y+APE + S Y+V D+WS+G+ Y L G P+ W + + V P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 160 NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW-LHDENRPVPLDILIYKLVK 218
+S SP +FV L KD KR + L HP+ L E R V + + K++
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILD 308
Query: 219 SYLRATP 225
+ ATP
Sbjct: 309 Q-MPATP 314
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 45 TIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE----------EDAPLKVIDFGLSDFV 94
+++ +I + VA H ++HRDLKP+N L +T E+ + + DFGL +
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 95 RPDQ-----RLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG-VITYILLCGSRPFWA 144
Q LN+ G++ + APE+L R D++S+G V YIL G PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 145 R--TESGIFRSVLRAD--PNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ ES I R + D HD S+ EA D + ++++ D KR TA + L HP
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDR---SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 27/178 (15%)
Query: 45 TIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE----------EDAPLKVIDFGLSDFV 94
+++ +I + VA H ++HRDLKP+N L +T E+ + + DFGL +
Sbjct: 137 SLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 95 RPDQ-----RLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG-VITYILLCGSRPFWA 144
Q LN+ G++ + APE+L R D++S+G V YIL G PF
Sbjct: 197 DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 256
Query: 145 R--TESGIFRSVLRAD--PNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ ES I R + D HD S+ EA D + ++++ D KR TA + L HP
Sbjct: 257 KYSRESNIIRGIFSLDEMKCLHDR---SLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 87/198 (43%), Gaps = 42/198 (21%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ + L + F H +VHRDLKPEN L T+ +K+ DFGL+ L
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMAL 168
Query: 101 NDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVI------TYILLCGSRPF----------- 142
+V + +Y APEVL +S Y DMWS+G I L CG+
Sbjct: 169 FPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIG 228
Query: 143 ------WARTES---GIFRSVLRADPNFHDSPWPSVSPEAKD----FVRRLLNKDHRKRM 189
W R S G F P P SV PE ++ + +L + KR+
Sbjct: 229 LPPEDDWPRDVSLPRGAF-------PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRI 281
Query: 190 TAAQALTHPWLH-DENRP 206
+A +AL H +LH DE P
Sbjct: 282 SAFRALQHSYLHKDEGNP 299
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 35/194 (18%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR-PDQ 98
E K+I + L V FCH +HRD+KPEN L T + + +K+ DFG + + P
Sbjct: 101 EHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPSD 157
Query: 99 RLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWAR----------- 145
+D V + +Y +PE+L Y D+W+IG + LL G P W
Sbjct: 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIR 216
Query: 146 --------------TESGIFRSVLRADPNFHDS---PWPSVSPEAKDFVRRLLNKDHRKR 188
+ + F V DP + +P++S A ++ L+ D +R
Sbjct: 217 KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276
Query: 189 MTAAQALTHPWLHD 202
+T Q L HP+ +
Sbjct: 277 LTCEQLLHHPYFEN 290
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++ FGL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILGFGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ + V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTA--DEMTGYVA 191
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ + V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTA--DEMTGYVA 191
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DFGL+ + V
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARHTA--DEMTGYVA 191
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 251
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 252 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ ++L + F H VVHRDLKP+N L T+ + +K+ DFGL+ L
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMAL 176
Query: 101 NDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADP 159
+V + +Y APEV L SY D+WS+G I + F ++ +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 160 NFHDSPWP-----------------------SVSPEAKDFVRRLLNKDHRKRMTAAQALT 196
+ WP + KD + + L + KR++A AL+
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296
Query: 197 HPWLHDENR 205
HP+ D R
Sbjct: 297 HPYFQDLER 305
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 27/189 (14%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ ++L + F H VVHRDLKP+N L T+ + +K+ DFGL+ L
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMAL 176
Query: 101 NDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADP 159
+V + +Y APEV L SY D+WS+G I + F ++ +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 160 NFHDSPWP-----------------------SVSPEAKDFVRRLLNKDHRKRMTAAQALT 196
+ WP + KD + + L + KR++A AL+
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296
Query: 197 HPWLHDENR 205
HP+ D R
Sbjct: 297 HPYFQDLER 305
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L + F + +L+ + GG+L++ L E+ A+ +++ + H G +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ--RLNDIVGSAYYVAPEVLHRS--- 118
HRD+KP+N L ++ LK+ DFG + + R + VG+ Y++PEVL
Sbjct: 196 HRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 119 --YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E D WS+GV Y +L G PF+A + G + ++ + +S EAK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 177 V 177
+
Sbjct: 313 I 313
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L + F + +L+ + GG+L++ L E+ A+ +++ + H G +
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 190
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ--RLNDIVGSAYYVAPEVLHRS--- 118
HRD+KP+N L ++ LK+ DFG + + R + VG+ Y++PEVL
Sbjct: 191 HRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 119 --YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E D WS+GV Y +L G PF+A + G + ++ + +S EAK+
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 177 V 177
+
Sbjct: 308 I 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++D GL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDAGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 13/181 (7%)
Query: 5 KLQHLFYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L + F + +L+ + GG+L++ L E+ A+ +++ + H G +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVN--LMSNYDVPEKWARFYTAEVVLALDAIHSMGFI 195
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ--RLNDIVGSAYYVAPEVLHRS--- 118
HRD+KP+N L ++ LK+ DFG + + R + VG+ Y++PEVL
Sbjct: 196 HRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 119 --YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDF 176
Y E D WS+GV Y +L G PF+A + G + ++ + +S EAK+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 312
Query: 177 V 177
+
Sbjct: 313 I 313
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 37/200 (18%)
Query: 44 KTIVEKILNIVAFCHLQGV--VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLN 101
K + +++ + HL V HRD+KP N L E D LK+ DFG + + P +
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFGSAKKLSPSEPNV 189
Query: 102 DIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--- 156
+ S YY APE++ ++ Y D+WS+G I ++ G F +G ++R
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 157 --------------ADPNFHDS---PWPSV--------SPEAKDFVRRLLNKDHRKRMTA 191
D + ++S PW +V + EA D + LL +RM
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 192 AQALTHPW---LHDENRPVP 208
+AL HP+ LHD +P
Sbjct: 310 YEALCHPYFDELHDPATKLP 329
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 91/202 (45%), Gaps = 32/202 (15%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
+CE L D I S ++ + +IL +++ H QG++HR+LKP N +E
Sbjct: 96 YCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI---DES 152
Query: 81 APLKVIDFGLS-------DFVRPDQR--------LNDIVGSAYYVAPEVLHRS--YNVEG 123
+K+ DFGL+ D ++ D + L +G+A YVA EVL + YN +
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-----DPNFHDSPWPSVSPEAKDFVR 178
D +S+G+I + + PF E LR+ P+F D+ K +R
Sbjct: 213 DXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPDFDDNK----XKVEKKIIR 265
Query: 179 RLLNKDHRKRMTAAQALTHPWL 200
L++ D KR A L WL
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++D GL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDGGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++D GL+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDRGLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 42/191 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + + V + Y
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRY 188
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF--------WAR------TESGIFRS 153
Y APEV L Y D+WS+G I L+ GS F W + T S F +
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMA 248
Query: 154 VLR-----------ADPN------FHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
L+ A P F D +PS S +A+D + ++L D KR+
Sbjct: 249 ALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRI 308
Query: 190 TAAQALTHPWL 200
+ +AL HP++
Sbjct: 309 SVDEALRHPYI 319
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 8/185 (4%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLF 74
+ + EG L + I S G ++ A +IL+ + H +VHRD+KP+N L
Sbjct: 86 YYLVMEYIEGPTLSEYIESHGPLSVDT-AINFTNQILDGIKHAHDMRIVHRDIKPQNILI 144
Query: 75 TTREEDAPLKVIDFGLSDFVRPDQ--RLNDIVGSAYYVAPEVLHRSYNVE-GDMWSIGVI 131
+ + LK+ DFG++ + + N ++G+ Y +PE E D++SIG++
Sbjct: 145 ---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 132 TYILLCGSRPFWARTESGI-FRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMT 190
Y +L G PF T I + + + PN + + + R KD R
Sbjct: 202 LYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYK 261
Query: 191 AAQAL 195
Q +
Sbjct: 262 TIQEM 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
++ +IL + + H ++HRDLKP N ED LK++DF L+ D + V
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFYLARHT--DDEMTGYVA 184
Query: 106 SAYYVAPEVLHR--SYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADP-- 159
+ +Y APE++ YN D+WS+G I LL G F + +LR P
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 244
Query: 160 ------------------------NFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
NF + + +P A D + ++L D KR+TAAQAL
Sbjct: 245 ELLKKISSESARNYIQSLTQMPKMNFANV-FIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 196 THPWL---HD-ENRPV 207
H + HD ++ PV
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 19/219 (8%)
Query: 1 MYHQKLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQ 60
+Y+++ Q ++ + C E+LD + + R+ A ++++ + + H Q
Sbjct: 75 LYNEEKQKMYMVMEYCV----CGMQEMLDSVPEK--RFPVCQAHGYFCQLIDGLEYLHSQ 128
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP---DQRLNDIVGSAYYVAPEVLHR 117
G+VH+D+KP N L TT LK+ G+++ + P D GS + PE+ +
Sbjct: 129 GIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG 185
Query: 118 SYNVEG---DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAK 174
G D+WS GV Y + G PF +F ++ + P +S
Sbjct: 186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS---- 241
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDILI 213
D ++ +L + KR + Q H W ++ P + I
Sbjct: 242 DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPI 280
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 22/201 (10%)
Query: 10 FYSNSFLFFTR-FCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---VAFCHLQGVVHR 65
F N L+ +CEGG+L RI ++ G +ED I++ + I + H + ++HR
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED--QILDWFVQICLALKHVHDRKILHR 149
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYYVAPEVL-HRSYNVEG 123
D+K +N T +D +++ DFG++ + L +G+ YY++PE+ ++ YN +
Sbjct: 150 DIKSQNIFLT---KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKS 206
Query: 124 DMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSP----EAKDFVRR 179
D+W++G + Y L F A + + ++ +P VS + + V +
Sbjct: 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSLHYSYDLRSLVSQ 259
Query: 180 LLNKDHRKRMTAAQALTHPWL 200
L ++ R R + L ++
Sbjct: 260 LFKRNPRDRPSVNSILEKGFI 280
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFC------HLQG---VVHRDLKPENFLFTT 76
EL+D L + + + + +TI E IL +A HL V+HRD+KP N L
Sbjct: 130 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 189
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-----RSYNVEGDMWSIGVI 131
+ +K+ DFG+S ++ G Y+APE ++ + Y+V+ D+WS+G+
Sbjct: 190 LGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 246
Query: 132 TYILLCGSRPF--WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
L P+ W + + V P P S E DF + L K+ ++R
Sbjct: 247 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFVDFTSQCLKKNSKERP 303
Query: 190 TAAQALTHPW--LHD 202
T + + HP+ LH+
Sbjct: 304 TYPELMQHPFFTLHE 318
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSA 107
+I++ + H + +++RDLKPEN L ++D +++ D GL+ ++ Q + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 108 YYVAPE-VLHRSYNVEGDMWSIGVITYILLCGSRPFWARTE----SGIFRSVLRADPNFH 162
++APE +L Y+ D +++GV Y ++ PF AR E + + VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 163 DSPWPSVSPEAKDFVRRLLNKDHRKRM-----TAAQALTHPWLHD 202
D SP +KDF LL KD KR+ + THP D
Sbjct: 414 D----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSA 107
+I++ + H + +++RDLKPEN L ++D +++ D GL+ ++ Q + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 108 YYVAPE-VLHRSYNVEGDMWSIGVITYILLCGSRPFWARTE----SGIFRSVLRADPNFH 162
++APE +L Y+ D +++GV Y ++ PF AR E + + VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 163 DSPWPSVSPEAKDFVRRLLNKDHRKRM-----TAAQALTHPWLHD 202
D SP +KDF LL KD KR+ + THP D
Sbjct: 414 D----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSA 107
+I++ + H + +++RDLKPEN L ++D +++ D GL+ ++ Q + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 108 YYVAPE-VLHRSYNVEGDMWSIGVITYILLCGSRPFWARTE----SGIFRSVLRADPNFH 162
++APE +L Y+ D +++GV Y ++ PF AR E + + VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 163 DSPWPSVSPEAKDFVRRLLNKDHRKRM-----TAAQALTHPWLHD 202
D SP +KDF LL KD KR+ + THP D
Sbjct: 414 D----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ-RLNDIVGSA 107
+I++ + H + +++RDLKPEN L ++D +++ D GL+ ++ Q + G+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTP 353
Query: 108 YYVAPE-VLHRSYNVEGDMWSIGVITYILLCGSRPFWARTE----SGIFRSVLRADPNFH 162
++APE +L Y+ D +++GV Y ++ PF AR E + + VL +
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP 413
Query: 163 DSPWPSVSPEAKDFVRRLLNKDHRKRM-----TAAQALTHPWLHD 202
D SP +KDF LL KD KR+ + THP D
Sbjct: 414 D----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 4 QKLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRY--------LEEDAKTIVEKILNIVA 55
Q L+H F N + F + ++D +L RY EE K + +++ +
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 56 FCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL 115
+ Q ++HRD+KP+N L +E + + DF ++ + + ++ + G+ Y+APE+
Sbjct: 130 YLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF 186
Query: 116 HR----SYNVEGDMWSIGVITYILLCGSRPFWARTESG------IFRSVLRADPNFHDSP 165
Y+ D WS+GV Y LL G RP+ R+ + F + + P S
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SA 242
Query: 166 WPSVSPEAKDFVRRLLNKDHRKRMTAAQALTH-PWLHDEN 204
W S E +++LL + +R + + + P+++D N
Sbjct: 243 W---SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 42/187 (22%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE 113
+ H G++HRDLKP N + + DA LK++DFGL+ + V + YY APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 114 V-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHDSPWPS 168
V L Y D+WS+GVI ++ G F + V+ P F P+
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 169 V----------------------------------SPEAKDFVRRLLNKDHRKRMTAAQA 194
V + +A+D + ++L D KR++ +A
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 195 LTHPWLH 201
L HP+++
Sbjct: 316 LQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 42/187 (22%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE 113
+ H G++HRDLKP N + + DA LK++DFGL+ + V + YY APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 114 V-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHDSPWPS 168
V L Y D+WS+GVI ++ G F + V+ P F P+
Sbjct: 196 VILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 169 V----------------------------------SPEAKDFVRRLLNKDHRKRMTAAQA 194
V + +A+D + ++L D KR++ +A
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 195 LTHPWLH 201
L HP+++
Sbjct: 316 LQHPYIN 322
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 26 ELLDRILSRGGRYLEEDAKTIVEKILNIVAFC------HLQG---VVHRDLKPENFLFTT 76
EL D L + + + + +TI E IL +A HL V+HRD+KP N L
Sbjct: 113 ELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINA 172
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH-----RSYNVEGDMWSIGVI 131
+ +K DFG+S ++ D + G Y APE ++ + Y+V+ D+WS+G+
Sbjct: 173 LGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGIT 229
Query: 132 TYILLCGSRPF--WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
L P+ W + + V P P S E DF + L K+ ++R
Sbjct: 230 XIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PADKFSAEFVDFTSQCLKKNSKERP 286
Query: 190 TAAQALTHPW--LHD 202
T + HP+ LH+
Sbjct: 287 TYPELXQHPFFTLHE 301
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 186
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 187 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 242
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 243 SVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L ++AK I E+IL V+ L+G
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVL--------KEAKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y+APE L + Y
Sbjct: 135 QIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQGTHY 190
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ L G P
Sbjct: 191 SVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE--EDAPLKVIDFGLS-DFVRPDQRL 100
K+ + +++N V FCH + +HRDLKP+N L + + E LK+ DFGL+ F P ++
Sbjct: 135 KSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 101 NDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRAD 158
+ + +Y PE+L R Y+ D+WSI I +L + F +E +
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254
Query: 159 PNFHDSPWPSVS--PEAKDFVRR------------------------LLNKDHRKRMTAA 192
D+ WP V+ P+ K + +L D KR++A
Sbjct: 255 GLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK 314
Query: 193 QALTHPWL-HDENRP 206
AL HP+ H++ P
Sbjct: 315 NALEHPYFSHNDFDP 329
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 24/202 (11%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRI-------LSRGGRYLEEDAKTIVEKIL--NIVAF 56
L+ L + N ++ F E EL + LSR ++ ++ + I E+ + V
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 57 C------HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL-NDIVGSAYY 109
C H + V+HRD+KP N T +K+ D GL F + +VG+ YY
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202
Query: 110 VAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS 168
++PE +H + YN + D+WS+G + Y + PF+ + S+ + P PS
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKKIEQCDYPPLPS 260
Query: 169 --VSPEAKDFVRRLLNKDHRKR 188
S E + V +N D KR
Sbjct: 261 DHYSEELRQLVNMCINPDPEKR 282
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 27/185 (14%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
E K ++ ++L + F H VVHRDLKP+N L T+ + +K+ DFGL+ L
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMAL 176
Query: 101 NDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADP 159
+V + +Y APEV L SY D+WS+G I + F ++ +L
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 160 NFHDSPWP-----------------------SVSPEAKDFVRRLLNKDHRKRMTAAQALT 196
+ WP + KD + + L + KR++A AL+
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296
Query: 197 HPWLH 201
HP+
Sbjct: 297 HPYFQ 301
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 34 RGGRYLEEDAKTI-VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSD 92
R GR + + +I + ++ V F H G+ HRD+KP+N L ++ D LK+ DFG +
Sbjct: 133 RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSK--DNTLKLCDFGSAK 190
Query: 93 FVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTE--- 147
+ P + + S +Y APE++ Y D+WSIG + L+ G F T
Sbjct: 191 KLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQ 250
Query: 148 ---------SGIFRSVLRADPNFHDSPWPSVS--------PE-----AKDFVRRLLNKDH 185
+ ++R +P++ + +P++ PE A D + ++L +
Sbjct: 251 LVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310
Query: 186 RKRMTAAQALTHPWL 200
R+ +A+ HP+
Sbjct: 311 DLRINPYEAMAHPFF 325
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 151
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 152 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 207
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 208 SVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 124
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 180
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++C F R + V+ P F
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 244
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 245 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 304
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 305 SVDEALQHPYIN 316
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 124
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 180
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 42/191 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF--------WAR------TESGIFRS 153
Y APEV L Y D+WS+G I L+ G F W + T S F +
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA 250
Query: 154 VLRA-----------------DPNFHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
L+ + F D +PS S +A+D + ++L D KR+
Sbjct: 251 ALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRI 310
Query: 190 TAAQALTHPWL 200
+ +AL HP++
Sbjct: 311 SVDEALRHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 195
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++C F R + V+ P F
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 255
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 256 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 315
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 316 SVDEALQHPYIN 327
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N L + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNA---VK 156
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 157 VVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 217 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + DA LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++ G F + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 42/187 (22%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE 113
+ H G++HRDLKP N + + DA LK++DFGL+ + V + YY APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 114 V-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHDSPWPS 168
V L Y D+WS+G I ++ G F + V+ P F P+
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 169 V----------------------------------SPEAKDFVRRLLNKDHRKRMTAAQA 194
V + +A+D + ++L D KR++ +A
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 195 LTHPWLH 201
L HP+++
Sbjct: 316 LQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + DA LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++ G F + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 124
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 180
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 22/143 (15%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG-------- 61
FYS+ + G LD++L + GR I E+IL V+ ++G
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR--------IPEQILGKVSIAVIKGLTYLREKH 124
Query: 62 -VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-Y 119
++HRD+KP N L +R E +K+ DFG+S + D N VG+ Y++PE L + Y
Sbjct: 125 KIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHY 180
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
+V+ D+WS+G+ + G P
Sbjct: 181 SVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++C F R + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N + + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VK 156
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 217 PPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + F++ L F G L LS+ G + E D + +I+ + H + VV+R
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 315
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR--SYNVE 122
DLKP N L +E +++ D GL+ DF + ++ + VG+ Y+APEVL + +Y+
Sbjct: 316 DLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 370
Query: 123 GDMWSIGVITYILLCGSRPF---WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D +S+G + + LL G PF + + I R L D S SPE + +
Sbjct: 371 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEG 426
Query: 180 LLNKDHRKRM 189
LL +D +R+
Sbjct: 427 LLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + F++ L F G L LS+ G + E D + +I+ + H + VV+R
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR--SYNVE 122
DLKP N L +E +++ D GL+ DF + ++ + VG+ Y+APEVL + +Y+
Sbjct: 317 DLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 123 GDMWSIGVITYILLCGSRPF---WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D +S+G + + LL G PF + + I R L D S SPE + +
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEG 427
Query: 180 LLNKDHRKRM 189
LL +D +R+
Sbjct: 428 LLQRDVNRRL 437
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + F++ L F G L LS+ G + E D + +I+ + H + VV+R
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR--SYNVE 122
DLKP N L +E +++ D GL+ DF + ++ + VG+ Y+APEVL + +Y+
Sbjct: 317 DLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 123 GDMWSIGVITYILLCGSRPF---WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D +S+G + + LL G PF + + I R L D S SPE + +
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEG 427
Query: 180 LLNKDHRKRM 189
LL +D +R+
Sbjct: 428 LLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 15/190 (7%)
Query: 6 LQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHR 65
+ + F++ L F G L LS+ G + E D + +I+ + H + VV+R
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYYVAPEVLHR--SYNVE 122
DLKP N L +E +++ D GL+ DF + ++ + VG+ Y+APEVL + +Y+
Sbjct: 317 DLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 123 GDMWSIGVITYILLCGSRPF---WARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRR 179
D +S+G + + LL G PF + + I R L D S SPE + +
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD----SFSPELRSLLEG 427
Query: 180 LLNKDHRKRM 189
LL +D +R+
Sbjct: 428 LLQRDVNRRL 437
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 17/156 (10%)
Query: 10 FYSNSFLFFT-RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
F + +L+ + GG+L++ L E+ AK +++ + H G++HRD+K
Sbjct: 144 FQDDKYLYMVMEYMPGGDLVN--LMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVK 201
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFVRPDQ----RLNDIVGSAYYVAPEVLHRS-----Y 119
P+N L ++ LK+ DFG ++ D+ + VG+ Y++PEVL Y
Sbjct: 202 PDNMLL---DKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYY 256
Query: 120 NVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVL 155
E D WS+GV + +L G PF+A + G + ++
Sbjct: 257 GRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N + + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VK 156
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 217 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N + + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VK 156
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 217 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N + + +K
Sbjct: 100 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VK 156
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 157 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 217 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++C F R + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)
Query: 25 GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLK 84
G L I+ G + A ++ + F H G++HRD+KP N + + +K
Sbjct: 117 GVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VK 173
Query: 85 VIDFG----LSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILLCGS 139
V+DFG ++D + ++G+A Y++PE S + D++S+G + Y +L G
Sbjct: 174 VMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 140 RPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKR-MTAAQ 193
PF + + +R DP + +S + V + L K+ R TAA+
Sbjct: 234 PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAE 288
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++ G F + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR----ADPNFHD 163
Y APEV L Y D+WS+G I ++ G F + V+ P F
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMK 250
Query: 164 SPWPSV----------------------------------SPEAKDFVRRLLNKDHRKRM 189
P+V + +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 33/183 (18%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
+I+N + FCH ++HRD+KPEN L + + +K+ DFG + P + +D V +
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 108 YYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPN----- 160
+Y APE+L Y D+W+IG + + G F ++ ++ N
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 161 ---FHDSP-------------------WPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
F+ +P +P +S D ++ L+ D KR A+ L H
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 199 WLH 201
+
Sbjct: 309 FFQ 311
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 349 SVDDALQHPYIN 360
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSR----------------------PFWAR 145
Y APEV L Y D+WS+G I ++ G P + +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251
Query: 146 TESGIFRSVLRADPN---------FHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
R+ + P F D +P+ S +A+D + ++L D KR+
Sbjct: 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 312 SVDEALQHPYIN 323
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 349 SVDDALQHPYIN 360
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSR----------------------PFWAR 145
Y APEV L Y D+WS+G I ++ G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPN---------FHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
R+ + P F D +P+ S +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 304 SVDDALQHPYIN 315
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 189
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 249
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 250 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 309
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 310 SVDDALQHPYIN 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 251
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 312 SVDDALQHPYIN 323
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 251
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 312 SVDDALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 244
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 305 SVDDALQHPYIN 316
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 244
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 305 SVDDALQHPYIN 316
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 304 SVDDALQHPYIN 315
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVIT------YILLCGSR----------------PFWAR 145
Y APEV L Y D+WS+G I IL G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPNFHDSPWPSVSP----------------EAKDFVRRLLNKDHRKRM 189
R+ + P + +P + P +A+D + ++L D KR+
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 190 TAAQALTHPWLH 201
+ AL HP+++
Sbjct: 311 SVDDALQHPYIN 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRY 192
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSR----------------------PFWAR 145
Y APEV L Y D+WS+G I ++ G P + +
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 252
Query: 146 TESGIFRSVLRADPN---------FHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
R+ + P F D +P+ S +A+D + ++L D KR+
Sbjct: 253 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 312
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 313 SVDEALQHPYIN 324
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
E + + L +A+ H ++HRD+K N L + E +K+ DFG + + P
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP--- 206
Query: 100 LNDIVGSAYYVAPEVL----HRSYNVEGDMWSIGVITYILLCGSRP--FWARTESGIFRS 153
N VG+ Y++APEV+ Y+ + D+WS+G IT I L +P F S ++
Sbjct: 207 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 265
Query: 154 VLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDILI 213
P W S ++FV L K + R T+ L H ++ E P + LI
Sbjct: 266 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 322
Query: 214 YK 215
+
Sbjct: 323 QR 324
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 42/192 (21%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY 108
++L + H G++HRDLKP N + + D LK++DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRY 190
Query: 109 YVAPEV-LHRSYNVEGDMWSIGVITYILLCGSR----------------------PFWAR 145
Y APEV L Y D+WS+G I ++ G P + +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250
Query: 146 TESGIFRSVLRADPN---------FHDSPWPSVS-------PEAKDFVRRLLNKDHRKRM 189
R+ + P F D +P+ S +A+D + ++L D KR+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRI 310
Query: 190 TAAQALTHPWLH 201
+ +AL HP+++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 16/182 (8%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
E + + L +A+ H ++HRD+K N L + E +K+ DFG + + P
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP--- 167
Query: 100 LNDIVGSAYYVAPEVL----HRSYNVEGDMWSIGVITYILLCGSRP--FWARTESGIFRS 153
N VG+ Y++APEV+ Y+ + D+WS+G IT I L +P F S ++
Sbjct: 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 226
Query: 154 VLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDILI 213
P W S ++FV L K + R T+ L H ++ E P + LI
Sbjct: 227 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 283
Query: 214 YK 215
+
Sbjct: 284 QR 285
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 220
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 278
Query: 153 SVLRA-DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 339 FFDELRDPNVKLP 351
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 198
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 256
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 317 FFDELRDPNVKLP 329
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 190
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 250
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 251 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 311 DELRDPNVKLP 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 186
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 307 DELRDPNVKLP 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 198
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 256
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 317 FFDELRDPNVKLP 329
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 187
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 245
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 246 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 305
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 306 FFDELRDPNVKLP 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 186
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 307 DELRDPNVKLP 317
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 205
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 263
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 264 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 323
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 324 FFDELRDPNVKLP 336
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 194
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 252
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 253 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 312
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 313 FFDELRDPNVKLP 325
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 186
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 307 DELRDPNVKLP 317
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSXIC-SR 186
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 307 DELRDPNVKLP 317
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 191
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 249
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 250 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 309
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 310 FFDELRDPNVKLP 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 214
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 272
Query: 153 SVLRA-DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 273 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 332
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 333 FFDELRDPNVKLP 345
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 186
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA-------- 157
YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 158 ----DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPW- 199
+PN+ + PW P PEA RLL R+T +A H +
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 200 --LHDENRPVP 208
L D N +P
Sbjct: 307 DELRDPNVKLP 317
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 265
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 323
Query: 153 SVLR-ADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 324 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 383
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 384 FFDELRDPNVKLP 396
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K + ++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 103 IVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA--- 157
I S YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 183 IC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 158 ---------DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
+PN+ + PW P PEA RLL R+T +A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 196 THPW---LHDENRPVP 208
H + L D N +P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 220
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 278
Query: 153 SVLRA-DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 339 FFDELRDPNVKLP 351
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 222
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 280
Query: 153 SVLRA-DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 281 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 340
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 341 FFDELRDPNVKLP 353
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLND 102
K + ++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSY 182
Query: 103 IVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRA--- 157
I S YY APE++ + Y D+WS G + LL G F + +++
Sbjct: 183 IC-SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 158 ---------DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQAL 195
+PN+ + PW P PEA RLL R+T +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 196 THPW---LHDENRPVP 208
H + L D N +P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 224
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGI-------------FR 152
YY APE++ + Y D+WS G + LL G F +SG+ R
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 282
Query: 153 SVLRA-DPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+R +PN+ + PW P PEA RLL R+T +A H
Sbjct: 283 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 342
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 343 FFDELRDPNVKLP 355
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSA 107
++ +A+ H G+ HRD+KP+N L + A LK+ DFG + VR + ++ I S
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVSYIC-SR 199
Query: 108 YYVAPEVLHRS--YNVEGDMWSIGVITYILLCGSRPFWARTESGIFR------------- 152
YY APE++ + Y D+WS G + LL G F +SG+ +
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG--DSGVDQLVEIIKVLGTPTR 257
Query: 153 -SVLRADPNFHD--------SPW-----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHP 198
+ +PN+ + PW P PEA RLL R+T +A H
Sbjct: 258 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 317
Query: 199 W---LHDENRPVP 208
+ L D N +P
Sbjct: 318 FFDELRDPNVKLP 330
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 21 FCEGGELLDRILSRGGRYLEED-AKTIVEKILNIVAFCHLQGVVHRDLKPEN-FLFTTRE 78
FC+ G L I R G L++ A + E+I V + H + ++HRDLKP N FL T++
Sbjct: 115 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ 174
Query: 79 EDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILL 136
+K+ DFGL ++ D + G+ Y++PE + + Y E D++++G+I LL
Sbjct: 175 ----VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 89/238 (37%), Gaps = 73/238 (30%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-------------- 91
+V +++ ++ + H G++HRD+KP N L + +KV DFGLS
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 92 --------DFVRPDQRLNDIVGSAYYVAPEVLHRS--YNVEGDMWSIGVITYILLCG--- 138
+F L D V + +Y APE+L S Y DMWS+G I +LCG
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 139 ----------------------------SRPFWARTESGIFRSVLRADPNFHD------- 163
PF + V N D
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 164 -----SPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL---HDENRPVPLDILI 213
+P + EA D + +LL + KR++A AL HP++ H+ N D +I
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHII 348
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + + ++ + I + + + H + ++HRDLK N
Sbjct: 84 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-- 141
Query: 77 REEDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 142 -HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 200
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 201 IVLYELMTGQLPY 213
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 39/201 (19%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFV--RPDQ 98
E + + ++L + + H V+HRDLKP N L E+ LK+ DFG++ + P +
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAE 214
Query: 99 R---LNDIVGSAYYVAPEV---LHRSYNVEGDMWSIGVI--------------------T 132
+ + V + +Y APE+ LH Y D+WS+G I
Sbjct: 215 HQYFMTEYVATRWYRAPELMLSLH-EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQ 273
Query: 133 YILLCGSRPFWARTE---SGIFRSVLRADPNFHDSPWPSVSP----EAKDFVRRLLNKDH 185
I++ P A + + R+ +++ P PW +V P +A + R+L +
Sbjct: 274 LIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP 333
Query: 186 RKRMTAAQALTHPWLHDENRP 206
R++AA AL HP+L + P
Sbjct: 334 SARISAAAALRHPFLAKYHDP 354
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI 103
+ IL + H ++H DLKPEN L + +KVIDFG S + QR+
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTX 259
Query: 104 VGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCG 138
+ S +Y APEV L Y + DMWS+G I LL G
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWL 200
DF+++ L D RMT QAL HPWL
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI 103
+ IL + H ++H DLKPEN L + +KVIDFG S + QR+
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTX 259
Query: 104 VGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCG 138
+ S +Y APEV L Y + DMWS+G I LL G
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWL 200
DF+++ L D RMT QAL HPWL
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI 103
+ IL + H ++H DLKPEN L + +KVIDFG S + QR+
Sbjct: 203 RKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYXX 259
Query: 104 VGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCG 138
+ S +Y APEV L Y + DMWS+G I LL G
Sbjct: 260 IQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWL 200
DF+++ L D RMT QAL HPWL
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + + ++ + I + + + H + ++HRDLK N
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-- 153
Query: 77 REEDAPLKVIDFGLS---DFVRPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 154 -HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 213 IVLYELMTGQLPY 225
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + + ++ + I + + + H + ++HRDLK N
Sbjct: 96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL-- 153
Query: 77 REEDAPLKVIDFGLS---DFVRPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 154 -HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 213 IVLYELMTGQLPY 225
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 39/201 (19%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFV--RPDQ 98
E + + ++L + + H V+HRDLKP N L E+ LK+ DFG++ + P +
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAE 215
Query: 99 R---LNDIVGSAYYVAPEV---LHRSYNVEGDMWSIGVI--------------------T 132
+ + V + +Y APE+ LH Y D+WS+G I
Sbjct: 216 HQYFMTEYVATRWYRAPELMLSLH-EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQ 274
Query: 133 YILLCGSRPFWARTE---SGIFRSVLRADPNFHDSPWPSVSP----EAKDFVRRLLNKDH 185
I++ P A + + R+ +++ P PW +V P +A + R+L +
Sbjct: 275 LIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP 334
Query: 186 RKRMTAAQALTHPWLHDENRP 206
R++AA AL HP+L + P
Sbjct: 335 SARISAAAALRHPFLAKYHDP 355
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 20/113 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----- 103
+I V F H +G++HRDLKP N FT D +KV DFGL + D+ +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 104 --------VGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILLCGSRPFWARTE 147
VG+ Y++PE +H SY+ + D++S+G+I + LL PF + E
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQME 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTR-EEDAPLKVIDFGLSDF----VRPDQ 98
K+++ +IL+ + + H V+HRDLKP N L E +K+ D G + ++P
Sbjct: 131 KSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA 190
Query: 99 RLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR 156
L+ +V + +Y APE+L R Y D+W+IG I LL F R E +
Sbjct: 191 DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE-----DIKT 245
Query: 157 ADPNFHDS 164
++P HD
Sbjct: 246 SNPYHHDQ 253
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVGSAYY 109
L + + H ++HRDLKP N L +E+ LK+ DFGL+ F P++ V + +Y
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWY 178
Query: 110 VAPEVL--HRSYNVEGDMWSIGVITYILL 136
APE+L R Y V DMW++G I LL
Sbjct: 179 RAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
F EGG L +++ G E+ A + + L + + H + ++H D+K +N L ++
Sbjct: 143 IFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 201
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLND------IVGSAYYVAPE-VLHRSYNVEGDMWSIG 129
A L DFG + ++PD D I G+ ++APE VL RS + + D+WS
Sbjct: 202 DGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 259
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
+ +L G P+ + + P + P PS +P ++ L K+ R+
Sbjct: 260 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRV 318
Query: 190 TAAQ 193
+AA+
Sbjct: 319 SAAE 322
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 7/119 (5%)
Query: 21 FCEGGELLDRILSRGGRYLEED-AKTIVEKILNIVAFCHLQGVVHRDLKPEN-FLFTTRE 78
FC+ G L I R G L++ A + E+I V + H + +++RDLKP N FL T++
Sbjct: 101 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ 160
Query: 79 EDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPE-VLHRSYNVEGDMWSIGVITYILL 136
+K+ DFGL ++ D + G+ Y++PE + + Y E D++++G+I LL
Sbjct: 161 ----VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENF 72
++ T++CEG L + + ++ I + + + H + ++HRD+K N
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNI 163
Query: 73 LFTTREEDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVL----HRSYNVEGDM 125
E +K+ DFGL+ Q++ GS ++APEV+ + ++ + D+
Sbjct: 164 FL---HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDV 220
Query: 126 WSIGVITYILLCGSRPF 142
+S G++ Y L+ G P+
Sbjct: 221 YSYGIVLYELMTGELPY 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 63 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 123 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 178
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 234
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 235 LHDLMCQCWRKDPEERPT 252
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 17/102 (16%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----- 103
+I V F H +G++HRDLKP N FT D +KV DFGL + D+ +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMP 228
Query: 104 --------VGSAYYVAPEVLH-RSYNVEGDMWSIGVITYILL 136
VG+ Y++PE +H +Y+ + D++S+G+I + LL
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 45 TIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVI--DFGLSDFVRPDQ---- 98
T++++ + +A H +VHRDLKP N L + +K + DFGL + +
Sbjct: 122 TLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFS 181
Query: 99 RLNDIVGSAYYVAPEVLHR------SYNVEGDMWSIGVITYILLC-GSRPFWA--RTESG 149
R + + G+ ++APE+L +Y V D++S G + Y ++ GS PF + ++
Sbjct: 182 RRSGVPGTEGWIAPEMLSEDCKENPTYTV--DIFSAGCVFYYVISEGSHPFGKSLQRQAN 239
Query: 150 IFRSVLRAD---PNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
I D P H+ A++ + +++ D +KR +A L HP+
Sbjct: 240 ILLGACSLDCLHPEKHEDVI------ARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 61 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 121 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 176
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 232
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 233 LHDLMCQCWRKDPEERPT 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 84 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 140
Query: 79 EDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 141 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 200
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 201 LYELMTGQLPY 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 138
Query: 79 EDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 199 LYELMTGQLPY 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 138
Query: 79 EDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 139 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 199 LYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 87 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 143
Query: 79 EDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 204 LYELMTGQLPY 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 87 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 143
Query: 79 EDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 144 EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 203
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 204 LYELMTGQLPY 214
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 107 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-- 164
Query: 77 REEDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 165 -HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 224 IVLYELMTGQLPY 236
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 239 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL + D G+ + + APE
Sbjct: 299 RMNYVHRDLRAANILVG---ENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAA 354
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 410
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 411 LHDLMCQCWRKDPEERPT 428
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 47/229 (20%)
Query: 21 FCEG--GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
FCE LL +L + + + K +++ +LN + + H ++HRD+K N L T
Sbjct: 106 FCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT--- 159
Query: 79 EDAPLKVIDFG------LSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGV 130
D LK+ DFG L+ +P++ N +V + +Y PE+L R Y D+W G
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSV--------------------- 169
I + S TE + + + WP+V
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 170 -------SPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDI 211
P A D + +LL D +R+ + AL H + + P+P D+
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD--PMPSDL 325
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-- 165
Query: 77 REEDAPLKVIDFGLSDFV---RPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 166 -HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 225 IVLYELMTGQLPY 237
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 62 HEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 122 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAA 177
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 233
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 234 LHDLMCQCWRKEPEERPT 251
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 47/229 (20%)
Query: 21 FCEG--GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
FCE LL +L + + + K +++ +LN + + H ++HRD+K N L T
Sbjct: 105 FCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT--- 158
Query: 79 EDAPLKVIDFG------LSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGV 130
D LK+ DFG L+ +P++ N +V + +Y PE+L R Y D+W G
Sbjct: 159 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGC 217
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSV--------------------- 169
I + S TE + + + WP+V
Sbjct: 218 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 277
Query: 170 -------SPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDI 211
P A D + +LL D +R+ + AL H + + P+P D+
Sbjct: 278 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD--PMPSDL 324
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLAAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 9 LFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLK 68
L+ F T + +GG L I S +Y + + I + +A+ H ++HRDL
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLN 135
Query: 69 PENFLFTTREEDAPLKVIDFGLSDFV--------------RPDQRLN-DIVGSAYYVAPE 113
N L E+ + V DFGL+ + +PD++ +VG+ Y++APE
Sbjct: 136 SHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 114 VLH-RSYNVEGDMWSIGVI 131
+++ RSY+ + D++S G++
Sbjct: 193 MINGRSYDEKVDVFSFGIV 211
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 47/229 (20%)
Query: 21 FCEG--GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
FCE LL +L + + + K +++ +LN + + H ++HRD+K N L T
Sbjct: 106 FCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT--- 159
Query: 79 EDAPLKVIDFG------LSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGV 130
D LK+ DFG L+ +P++ N +V + +Y PE+L R Y D+W G
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSV--------------------- 169
I + S TE + + + WP+V
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 170 -------SPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDI 211
P A D + +LL D +R+ + AL H + + P+P D+
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD--PMPSDL 325
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 65 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 125 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 180
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 236
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 237 LHDLMCQCWRKEPEERPT 254
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 93/229 (40%), Gaps = 47/229 (20%)
Query: 21 FCEG--GELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
FCE LL +L + + + K +++ +LN + + H ++HRD+K N L T
Sbjct: 106 FCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT--- 159
Query: 79 EDAPLKVIDFG------LSDFVRPDQRLNDIVGSAYYVAPEVL--HRSYNVEGDMWSIGV 130
D LK+ DFG L+ +P++ N +V + +Y PE+L R Y D+W G
Sbjct: 160 RDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 131 ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSV--------------------- 169
I + S TE + + + WP+V
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKD 278
Query: 170 -------SPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDI 211
P A D + +LL D +R+ + AL H + + P+P D+
Sbjct: 279 RLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD--PMPSDL 325
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
F EGG L +++ G E+ A + + L + + H + ++H D+K +N L ++
Sbjct: 162 IFMELLEGGSL-GQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSS 220
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLND------IVGSAYYVAPE-VLHRSYNVEGDMWSIG 129
A L DFG + ++PD I G+ ++APE VL RS + + D+WS
Sbjct: 221 DGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSC 278
Query: 130 VITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRM 189
+ +L G P+ + + P + P PS +P ++ L K+ R+
Sbjct: 279 CMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRV 337
Query: 190 TAAQ 193
+AA+
Sbjct: 338 SAAE 341
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 138
Query: 79 EDAPLKVIDFGLS---DFVRPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 139 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 198
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 199 LYELMTGQLPY 209
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 238 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 298 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 353
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 409
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 410 LHDLMCQCWRKEPEERPT 427
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 1 MYHQKLQHLF----YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAF 56
+ H KL L+ T F E G L D + ++ G + E + + +A+
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPE 113
V+HRDL N L E+ +KV DFG++ FV DQ + G+ + + +PE
Sbjct: 120 LEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPE 175
Query: 114 VLHRS-YNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSV 154
V S Y+ + D+WS GV+ + + G P+ R+ S + +
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 238 HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 298 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 353
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 409
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 410 LHDLMCQCWRKEPEERPT 427
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 19 TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTRE 78
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 102 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---H 158
Query: 79 EDAPLKVIDFGLS---DFVRPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIGVI 131
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G++
Sbjct: 159 EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV 218
Query: 132 TYILLCGSRPF 142
Y L+ G P+
Sbjct: 219 LYELMTGQLPY 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 69 HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 129 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 184
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 240
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 241 LHDLMCQCWRKEPEERPT 258
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNSFLFFTRFCE---GGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S CE G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 69 HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 129 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEWTARQGAKFPIKWTAPEAA 184
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 240
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 241 LHDLMCQCWRKEPEERPT 258
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T++CEG L + ++ I + + + H + ++HRDLK N
Sbjct: 108 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL-- 165
Query: 77 REEDAPLKVIDFGLS---DFVRPDQRLNDIVGSAYYVAPEVLH----RSYNVEGDMWSIG 129
ED +K+ DFGL+ + + GS ++APEV+ Y+ + D+++ G
Sbjct: 166 -HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 130 VITYILLCGSRPF 142
++ Y L+ G P+
Sbjct: 225 IVLYELMTGQLPY 237
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 18/200 (9%)
Query: 1 MYHQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAF 56
+ H+KL L+ S T + G LLD + G+YL + +I + +A+
Sbjct: 319 LRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPE 113
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 379 VERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPE 434
Query: 114 V-LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSP 171
L+ + ++ D+WS G+ +T + G P+ + V R + P P P
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECP 490
Query: 172 EA-KDFVRRLLNKDHRKRMT 190
E+ D + + K+ +R T
Sbjct: 491 ESLHDLMCQCWRKEPEERPT 510
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEXTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 62 VVHRDLKPENFLFTTREEDAPL--KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL---H 116
+VHRDL+ N + +E+AP+ KV DFGLS + ++ ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPF 142
SY + D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYN 120
++H DLKPEN L + A +K++DFG S + QR+ + S +Y +PEV L Y+
Sbjct: 180 IIHCDLKPENILLCNPKRSA-IKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 121 VEGDMWSIGVITYILLCGSRPFWARTE 147
+ DMWS+G I + G F E
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 61 GVVHRDLKPENFLFTTREEDAPL-KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS- 118
G+VHR++KP N + E+ + K+ DFG + + D++ + G+ Y+ P++ R+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 119 --------YNVEGDMWSIGVITYILLCGSRPF 142
Y D+WSIGV Y GS PF
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 33/121 (27%)
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSD-----------FVRPD--------- 97
H G+VHRD+KP NFL+ R + L +DFGL+ FV+ +
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 98 ---------QRLNDIVGSAYYVAPEVLHRSYN--VEGDMWSIGVITYILLCGSRPFWART 146
Q++ G+ + APEVL + N DMWS GVI LL G PF+ +
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 147 E 147
+
Sbjct: 252 D 252
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYN 120
++H DLKPEN L + A +K++DFG S + QR+ + S +Y +PEV L Y+
Sbjct: 161 IIHCDLKPENILLCNPKRSA-IKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 121 VEGDMWSIGVITYILLCGSRPFWARTE 147
+ DMWS+G I + G F E
Sbjct: 218 LAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 14 SFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV---HRDLKPE 70
+ F GG L +R+LS G R + +I + + H + +V HRDLK
Sbjct: 80 NLCLVMEFARGGPL-NRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 71 NFLFTTREEDAP-----LKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG-D 124
N L + E+ LK+ DFGL+ +++ G+ ++APEV+ S +G D
Sbjct: 138 NILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-AAGAYAWMAPEVIRASMFSKGSD 196
Query: 125 MWSIGVITYILLCGSRPF 142
+WS GV+ + LL G PF
Sbjct: 197 VWSYGVLLWELLTGEVPF 214
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F E G L D + ++ G + E + + +A+ V+HRDL N L E+
Sbjct: 83 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVG---EN 139
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVLHRS-YNVEGDMWSIGVITYILL 136
+KV DFG++ FV DQ + G+ + + +PEV S Y+ + D+WS GV+ + +
Sbjct: 140 QVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
Query: 137 C-GSRPFWARTESGIFRSV 154
G P+ R+ S + +
Sbjct: 199 SEGKIPYENRSNSEVVEDI 217
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 24 GGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPL 83
GG+ L R S+G + +A + +IL +++ H G+V+ DLKPEN + T + L
Sbjct: 167 GGQSLKR--SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ----L 220
Query: 84 KVIDFGLSDFVRPDQRLND---IVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCGSR 140
K+ID G R+N + G+ + APE++ V D++++G R
Sbjct: 221 KLIDLGAV------SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVG----------R 264
Query: 141 PFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHRKRMTAAQALT 196
A T R+ D D P +RR ++ D R+R T A+ ++
Sbjct: 265 TLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 1 MYHQKLQHLFY----SNSFLFFTRFCEGGELLDRILS-RGGRYLEEDAKTIVEKILNIVA 55
+ H KL L+ T + G LLD + S GG+ L +I +A
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 124
Query: 56 FCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAP 112
+ + +HRDL+ N L + E K+ DFGL+ + D G+ + + AP
Sbjct: 125 YIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAP 180
Query: 113 EVLH-RSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSV 154
E ++ + ++ D+WS G++ Y I+ G P+ RT + + ++
Sbjct: 181 EAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYN 120
++H DLKPEN L + A +K++DFG S + QR+ + S +Y +PEV L Y+
Sbjct: 180 IIHCDLKPENILLCNPKRXA-IKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 121 VEGDMWSIGVITYILLCGSRPFWARTE 147
+ DMWS+G I + G F E
Sbjct: 237 LAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S + G LLD + G+YL + +I + +A+
Sbjct: 72 HEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 132 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 187
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 243
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + KD +R T
Sbjct: 244 LHDLMCQCWRKDPEERPT 261
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPL-KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS 118
G+VHR++KP N + E+ + K+ DFG + + D++ + G+ Y+ P++ R+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 119 ---------YNVEGDMWSIGVITYILLCGSRPF 142
Y D+WSIGV Y GS PF
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F E G L D + ++ G + E + + +A+ V+HRDL N L E+
Sbjct: 81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---EN 137
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVLHRS-YNVEGDMWSIGVITYILL 136
+KV DFG++ FV DQ + G+ + + +PEV S Y+ + D+WS GV+ + +
Sbjct: 138 QVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 137 C-GSRPFWARTESGIFRSV 154
G P+ R+ S + +
Sbjct: 197 SEGKIPYENRSNSEVVEDI 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 1 MYHQKLQHLFY----SNSFLFFTRFCEGGELLDRILS-RGGRYLEEDAKTIVEKILNIVA 55
+ H KL L+ T F G LLD + S GG+ L +I +A
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 123
Query: 56 FCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAP 112
+ + +HRDL+ N L + E K+ DFGL+ + D G+ + + AP
Sbjct: 124 YIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIE-DNEYTAREGAKFPIKWTAP 179
Query: 113 EVLH-RSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSV 154
E ++ + ++ ++WS G++ Y I+ G P+ RT + + ++
Sbjct: 180 EAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 20 RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREE 79
F E G L D + ++ G + E + + +A+ V+HRDL N L E
Sbjct: 82 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---E 138
Query: 80 DAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVLHRS-YNVEGDMWSIGVITYIL 135
+ +KV DFG++ FV DQ + G+ + + +PEV S Y+ + D+WS GV+ + +
Sbjct: 139 NQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
Query: 136 LC-GSRPFWARTESGIFRSV 154
G P+ R+ S + +
Sbjct: 198 FSEGKIPYENRSNSEVVEDI 217
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T F E G L + G++ ++ I + + VHRDL N
Sbjct: 106 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARN 165
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAY---YVAPEVL-HRSYNVEGD 124
L + + KV DFGLS F+ D +G + APE + +R + D
Sbjct: 166 ILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 222
Query: 125 MWSIGVITY-ILLCGSRPFWARTESGIFRSV 154
+WS G++ + ++ G RP+W T + ++
Sbjct: 223 VWSYGIVMWEVMSYGERPYWDMTNQDVINAI 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ T + E G L + + G++ ++ + + + G VHRDL N L
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 76 TREEDAPLKVIDFGLSDFVR--PDQRLNDIVGSA--YYVAPEVLH-RSYNVEGDMWSIGV 130
+ + KV DFGLS + PD G + APE + R+++ D+WS GV
Sbjct: 185 --DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + +L G RP+W T + SV
Sbjct: 243 VMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 3 HQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAFCH 58
H+KL L+ S + G LLD + G+YL + +I + +A+
Sbjct: 238 HEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV- 114
VHRDL+ N L E+ KV DFGL+ + D G+ + + APE
Sbjct: 298 RMNYVHRDLRAANILVG---ENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAA 353
Query: 115 LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
L+ + ++ D+WS G+ +T + G P+ + V R + P P PE+
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPCPPECPES 409
Query: 174 -KDFVRRLLNKDHRKRMT 190
D + + K+ +R T
Sbjct: 410 LHDLMCQCWRKEPEERPT 427
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREED 80
F E G L D + ++ G + E + + +A+ V+HRDL N L E+
Sbjct: 86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---EN 142
Query: 81 APLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVLHRS-YNVEGDMWSIGVITYILL 136
+KV DFG++ FV DQ + G+ + + +PEV S Y+ + D+WS GV+ + +
Sbjct: 143 QVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
Query: 137 C-GSRPFWARTESGIFRSV 154
G P+ R+ S + +
Sbjct: 202 SEGKIPYENRSNSEVVEDI 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 20 RFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREE 79
F E G L D + ++ G + E + + +A+ V+HRDL N L E
Sbjct: 102 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---E 158
Query: 80 DAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVLHRS-YNVEGDMWSIGVITYIL 135
+ +KV DFG++ FV DQ + G+ + + +PEV S Y+ + D+WS GV+ + +
Sbjct: 159 NQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
Query: 136 LC-GSRPFWARTESGIFRSV 154
G P+ R+ S + +
Sbjct: 218 FSEGKIPYENRSNSEVVEDI 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ T + E G L + + G++ ++ + + + G VHRDL N L
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV- 184
Query: 76 TREEDAPLKVIDFGLSDFVR--PDQRLNDIVGSA--YYVAPEVLH-RSYNVEGDMWSIGV 130
+ + KV DFGLS + PD G + APE + R+++ D+WS GV
Sbjct: 185 --DSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + +L G RP+W T + SV
Sbjct: 243 VMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 28/117 (23%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
EE KTI+ +L F H G++HRDLKP N L +D +KV DFGL+ + ++
Sbjct: 128 EEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVCDFGLARTINSEKD 184
Query: 100 LNDI-----------------------VGSAYYVAPE--VLHRSYNVEGDMWSIGVI 131
N + V + +Y APE +L +Y D+WS G I
Sbjct: 185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI 241
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 166 WPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
+PS+S + + + +L + KR+T QAL HP+L D
Sbjct: 331 YPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 31/120 (25%)
Query: 40 EEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR 99
E+ KTI+ +L F H G++HRDLKP N L +D +K+ DFGL+ + D+
Sbjct: 130 EQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN---QDCSVKICDFGLARTINSDKD 186
Query: 100 L---NDI-----------------------VGSAYYVAPE--VLHRSYNVEGDMWSIGVI 131
+ ND+ V + +Y APE +L +Y D+WS G I
Sbjct: 187 IHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCI 246
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 166 WPSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
+ S+S E D + +L + +KR+T +AL+HP+L D
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 62 VVHRDLKPENFLFTTREEDAPL--KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL---H 116
+VHRDL+ N + +E+AP+ KV DFG S + ++ ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPF 142
SY + D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 11 YSNSFLFFTRFC----EGGELLDRILSRGGR--YLEEDAKTIVEKILNIVAFCHLQGVVH 64
Y F+++ C G L I++R + ED K +IL + + + H
Sbjct: 101 YHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTH 160
Query: 65 RDLKPENFLF----------------------TTREEDAPLKVIDFGLSDFVRPDQRLND 102
DLKPEN L R + +K+IDFG + F + D
Sbjct: 161 TDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF-KSDYH-GS 218
Query: 103 IVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
I+ + Y APEV L+ ++V DMWS G + L GS F
Sbjct: 219 IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 73 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 126
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 127 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 182
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 71 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 124
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 180
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 232
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 74 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 127
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 128 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 183
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 235
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 67 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 120
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 121 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 176
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 75 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 128
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 129 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 184
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 236
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 118
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 174
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 62 VVHRDLKPENFLFTTREEDAPL--KVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL---H 116
+VHRDL+ N + +E+AP+ KV DF LS + ++ ++G+ ++APE +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 117 RSYNVEGDMWSIGVITYILLCGSRPF 142
SY + D +S +I Y +L G PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 66 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 119
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 120 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 175
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 227
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 71 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 124
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 125 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 180
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 232
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 70 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 123
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 124 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 179
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 118
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DAEXTAREGAKFPI 174
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 118
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEXTAREGAKFPI 174
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 65 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 118
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 119 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 174
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 60 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 113
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HRDL+ N L + + K+ DFGL+ + D G+ +
Sbjct: 114 AEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 169
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 32 LSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS 91
L R G A IV +I + + H G HRD+KPEN L + D ++DFG++
Sbjct: 125 LRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA---DDFAYLVDFGIA 181
Query: 92 DFVRPDQ--RLNDIVGSAYYVAPEVLHRSYNV-EGDMWSIGVITYILLCGSRPFWA 144
++ +L + VG+ YY APE S+ D++++ + Y L GS P+
Sbjct: 182 SATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + G++ ++ I + + G VHRDL N
Sbjct: 95 SKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARN 154
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVLH-RSYNVEGDMW 126
L + + KV DFGLS + D + APE + R + D+W
Sbjct: 155 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVW 211
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W T + ++V
Sbjct: 212 SYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 59/209 (28%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFT------------TREE----DAPLKVIDFGLSD 92
+I V F H + H DLKPEN LF R+E + +KV+DFG +
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 93 FVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFW---ARTES 148
+ D+ + +V + +Y APEV L ++ D+WSIG I G F ++
Sbjct: 186 Y--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 149 GIFRSVL--------------------RADPNFHDSPWPSVSPEAK-------------- 174
+ +L R D + H S VS K
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 175 ---DFVRRLLNKDHRKRMTAAQALTHPWL 200
D ++++L D KR+T +AL HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 75/202 (37%), Gaps = 20/202 (9%)
Query: 5 KLQHLFYSNSFLFF-TRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVV 63
+L+ + L+ T C G L + G E + L +A H QG+V
Sbjct: 121 RLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 64 HRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYNVEG 123
H D+KP N R K+ DFGL + G Y+APE+L SY
Sbjct: 180 HLDVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAA 236
Query: 124 DMWSIGVITYILLCG-----SRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVR 178
D++S+G+ + C W + G P F +S E + +
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLRQGYL------PPEFTA----GLSSELRSVLV 286
Query: 179 RLLNKDHRKRMTAAQALTHPWL 200
+L D + R TA L P L
Sbjct: 287 MMLEPDPKLRATAEALLALPVL 308
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH- 116
H GVVHRDL P N L + + + DF L+ D V +Y APE++
Sbjct: 151 HEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADPNFHD-----SP--- 165
+ + DMWS G + + F T ++ P D SP
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 166 --------------W----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
W P+ P A D + ++L + ++R++ QAL HP+ E+
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF--ESLFD 325
Query: 208 PLDI 211
PLD+
Sbjct: 326 PLDL 329
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 35/184 (19%)
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLH- 116
H GVVHRDL P N L + + + DF L+ D V +Y APE++
Sbjct: 151 HEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 117 -RSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLR--ADPNFHD-----SP--- 165
+ + DMWS G + + F T ++ P D SP
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 166 --------------W----PSVSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPV 207
W P+ P A D + ++L + ++R++ QAL HP+ E+
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF--ESLFD 325
Query: 208 PLDI 211
PLD+
Sbjct: 326 PLDL 329
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR--------PD 97
+ ++++N V F H + +HRD+KP+NFL + +IDFGL+ R P
Sbjct: 108 LADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPY 167
Query: 98 QRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWARTESG 149
+ ++ G+A Y + L + D+ S+G + L GS P W ++G
Sbjct: 168 RENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAG 219
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGR----YLEEDAKTIVEKILNIVAFCH---LQGVVHR 65
N + EGG L + + G Y A + + VA+ H + ++HR
Sbjct: 73 NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGD 124
DLKP N L LK+ DFG + ++ N GSA ++APEV S Y+ + D
Sbjct: 131 DLKPPNLLLVAG--GTVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCD 186
Query: 125 MWSIGVITYILLCGSRPF 142
++S G+I + ++ +PF
Sbjct: 187 VFSWGIILWEVITRRKPF 204
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 11/151 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T F E G L + G++ ++ I + + VHR L N
Sbjct: 80 STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARN 139
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAY---YVAPEVL-HRSYNVEGD 124
L + + KV DFGLS F+ D +G + APE + +R + D
Sbjct: 140 ILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASD 196
Query: 125 MWSIGVITY-ILLCGSRPFWARTESGIFRSV 154
+WS G++ + ++ G RP+W T + ++
Sbjct: 197 VWSYGIVMWEVMSYGERPYWDMTNQDVINAI 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGR----YLEEDAKTIVEKILNIVAFCH---LQGVVHR 65
N + EGG L + + G Y A + + VA+ H + ++HR
Sbjct: 72 NPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGD 124
DLKP N L LK+ DFG + ++ + + GSA ++APEV S Y+ + D
Sbjct: 130 DLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 125 MWSIGVITYILLCGSRPF 142
++S G+I + ++ +PF
Sbjct: 186 VFSWGIILWEVITRRKPF 203
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 1 MYHQKLQHLF---YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI---- 53
+ HQ+L L+ T + E G L+D + + G K + K+L++
Sbjct: 61 LQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG------IKLTINKLLDMAAQI 114
Query: 54 ---VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY-- 108
+AF + +HR+L+ N L + + K+ DFGL+ + D G+ +
Sbjct: 115 AEGMAFIEERNYIHRNLRAANILVS---DTLSCKIADFGLARLIE-DNEYTAREGAKFPI 170
Query: 109 -YVAPEVL-HRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
+ APE + + ++ ++ D+WS G+ +T I+ G P+ T + +++ R
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI-------VAFC 57
KL + T F G LLD + S +E +K + K+++ +AF
Sbjct: 74 KLHAVVTKEPIYIITEFMAKGSLLDFLKS------DEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV 114
+ +HRDL+ N L + K+ DFGL+ + D G+ + + APE
Sbjct: 128 EQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEA 183
Query: 115 LH-RSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
++ S+ ++ D+WS G++ I+ G P+ + + R++ R + P P PE
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG----YRMPRPENCPE 239
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 116 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 175
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 176 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 232
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 233 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 26/180 (14%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI-------VAFC 57
KL + T F G LLD + S +E +K + K+++ +AF
Sbjct: 247 KLHAVVTKEPIYIITEFMAKGSLLDFLKS------DEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV 114
+ +HRDL+ N L + K+ DFGL+ + D G+ + + APE
Sbjct: 301 EQRNYIHRDLRAANILVSA---SLVCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEA 356
Query: 115 LH-RSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
++ S+ ++ D+WS G++ I+ G P+ + + R++ R + P P PE
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG----YRMPRPENCPE 412
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 59/214 (27%)
Query: 44 KTIVEKILNIVAFCHLQGVVHRDLKPENFLFT------------TREE----DAPLKVID 87
+ + +I V F H + H DLKPEN LF R+E + +KV+D
Sbjct: 121 RKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVD 180
Query: 88 FGLSDFVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFW--- 143
FG + + D+ + +V +Y APEV L ++ D+WSIG I G F
Sbjct: 181 FGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
Query: 144 ARTESGIFRSVL--------------------RADPNFHDSPWPSVSPEAK--------- 174
++ + +L R D + H S VS K
Sbjct: 239 SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ 298
Query: 175 --------DFVRRLLNKDHRKRMTAAQALTHPWL 200
D ++++L D KR+T +AL HP+
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 19/107 (17%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTRE----------------EDAPLKVIDFGLSD 92
++ V F H + H DLKPEN LF + + ++V+DFG +
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 93 FVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCG 138
F + + IV + +Y APEV L ++ D+WSIG I + G
Sbjct: 205 F--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLF 74
+ T + E G L + + G + ++ I + + VHRDL N L
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV 180
Query: 75 TTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMWSIG 129
+ + KV DFGLS + D + APE + +R + D+WS G
Sbjct: 181 NS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG 237
Query: 130 VITY-ILLCGSRPFWARTESGIFRSV 154
++ + ++ G RP+W + + +++
Sbjct: 238 IVMWEVMTYGERPYWELSNHEVMKAI 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ F E G L + G++ ++ I + + G VHRDL N L
Sbjct: 120 MIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVN 179
Query: 76 TREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWSIGV 130
+ + KV DFGLS + D + + G + APE + +R + D+WS G+
Sbjct: 180 S---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGI 236
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + ++ G RP+W + + +++
Sbjct: 237 VMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 34/136 (25%)
Query: 32 LSRGGRYLEE-DAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGL 90
L R YL E KT++ +L V + H G++HRDLKP N L +D +KV DFGL
Sbjct: 146 LFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCDFGL 202
Query: 91 SDFV--------------RPD--------------QRLNDIVGSAYYVAPE--VLHRSYN 120
+ V R D ++L V + +Y APE +L +Y
Sbjct: 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT 262
Query: 121 VEGDMWSIGVITYILL 136
D+WSIG I LL
Sbjct: 263 EAIDVWSIGCIFAELL 278
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 106 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 165
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 166 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 222
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 223 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 89 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 148
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 149 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 205
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 206 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 59/209 (28%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTRE----------------EDAPLKVIDFGLSD 92
++ + + F H + H DLKPEN LF E ++ ++V DFG +
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 222
Query: 93 FVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFW-------- 143
F + IV + +Y PEV L + D+WSIG I + G F
Sbjct: 223 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 144 -----------------ARTESGIFRSVLRADPNFHDSPW--PSVSP------------- 171
R + ++ L D N D + + P
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 340
Query: 172 EAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+ D +RR+L D +R+T A+AL HP+
Sbjct: 341 QLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ T + E G L + GR+ ++ I + + + VHRDL N L
Sbjct: 106 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVN 165
Query: 76 TREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMWSIGV 130
+ + KV DFG+S + D + APE + +R + D+WS G+
Sbjct: 166 S---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 222
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + ++ G RP+W + + +++
Sbjct: 223 VMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 59/209 (28%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTRE----------------EDAPLKVIDFGLSD 92
++ + + F H + H DLKPEN LF E ++ ++V DFG +
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 199
Query: 93 FVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFW-------- 143
F + IV + +Y PEV L + D+WSIG I + G F
Sbjct: 200 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 144 -----------------ARTESGIFRSVLRADPNFHDSPW--PSVSP------------- 171
R + ++ L D N D + + P
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 317
Query: 172 EAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+ D +RR+L D +R+T A+AL HP+
Sbjct: 318 QLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 59/209 (28%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTRE----------------EDAPLKVIDFGLSD 92
++ + + F H + H DLKPEN LF E ++ ++V DFG +
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190
Query: 93 FVRPDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFW-------- 143
F + IV + +Y PEV L + D+WSIG I + G F
Sbjct: 191 F--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 144 -----------------ARTESGIFRSVLRADPNFHDSPW--PSVSP------------- 171
R + ++ L D N D + + P
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308
Query: 172 EAKDFVRRLLNKDHRKRMTAAQALTHPWL 200
+ D +RR+L D +R+T A+AL HP+
Sbjct: 309 QLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGL+ + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
+L L +S T++ G LLD + G + +I + + G+VH
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 156
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH-RSYN 120
R+L N L + + ++V DFG++D + PD + ++ ++A E +H Y
Sbjct: 157 RNLAARNVLLKSPSQ---VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 213
Query: 121 VEGDMWSIGVITYILLC-GSRPF 142
+ D+WS GV + L+ G+ P+
Sbjct: 214 HQSDVWSYGVTVWELMTFGAEPY 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ T + E G L + GR+ ++ I + + + VHRDL N L
Sbjct: 91 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN 150
Query: 76 TREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMWSIGV 130
+ + KV DFG+S + D + APE + +R + D+WS G+
Sbjct: 151 S---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 207
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + ++ G RP+W + + +++
Sbjct: 208 VMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----- 100
I + N + F H +HRD+K N L +E K+ DFGL+ R ++
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVM 191
Query: 101 -NDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCG 138
+ IVG+ Y+APE L + D++S GV+ ++ G
Sbjct: 192 XSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVH 64
+L L +S T++ G LLD + G + +I + + G+VH
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVH 138
Query: 65 RDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQR---LNDIVGSAYYVAPEVLH-RSYN 120
R+L N L + + ++V DFG++D + PD + ++ ++A E +H Y
Sbjct: 139 RNLAARNVLLKSPSQ---VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT 195
Query: 121 VEGDMWSIGVITYILLC-GSRPF 142
+ D+WS GV + L+ G+ P+
Sbjct: 196 HQSDVWSYGVTVWELMTFGAEPY 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 16 LFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFT 75
+ T + E G L + GR+ ++ I + + + VHRDL N L
Sbjct: 85 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVN 144
Query: 76 TREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMWSIGV 130
+ + KV DFG+S + D + APE + +R + D+WS G+
Sbjct: 145 S---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGI 201
Query: 131 ITY-ILLCGSRPFWARTESGIFRSV 154
+ + ++ G RP+W + + +++
Sbjct: 202 VMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T + E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGL + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T E G L + ++ ++ I + + + G VHRDL N
Sbjct: 118 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 178 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 235 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLND--- 102
I + N + F H +HRD+K N L +E K+ DFGL+ R ++
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQTVM 191
Query: 103 ---IVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCG 138
IVG+ Y+APE L + D++S GV+ ++ G
Sbjct: 192 XXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 2 YHQKLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG 61
Y +L + +++ T+ G LLD + GR +D +I +++
Sbjct: 80 YVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGS----AYYVAPEVLHR 117
+VHRDL N L + +K+ DFGL+ + D+ G + +L R
Sbjct: 140 LVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
+ + D+WS GV + L+ G++P+
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPY 222
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLND--- 102
I + N + F H +HRD+K N L +E K+ DFGL+ R ++
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVM 185
Query: 103 ---IVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCG 138
IVG+ Y+APE L + D++S GV+ ++ G
Sbjct: 186 XXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 148 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 205 IYTHQSDVWSYGVTVWELMTFGSKPY 230
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
S + T E G L + ++ ++ I + + + G VHRDL N
Sbjct: 89 SKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 148
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY----YVAPEVL-HRSYNVEGDMW 126
L + + KV DFGLS + D + +PE + +R + D+W
Sbjct: 149 ILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVW 205
Query: 127 SIGVITY-ILLCGSRPFWARTESGIFRSV 154
S G++ + ++ G RP+W + + ++V
Sbjct: 206 SYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 36/180 (20%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI-------VAFC 57
KL + T F G LLD + S +E +K + K+++ +AF
Sbjct: 241 KLHAVVTKEPIYIITEFMAKGSLLDFLKS------DEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 58 HLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEV 114
+ +HRDL+ N L + K+ DFGL+ VG+ + + APE
Sbjct: 295 EQRNYIHRDLRAANILVSA---SLVCKIADFGLAR-----------VGAKFPIKWTAPEA 340
Query: 115 LH-RSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
++ S+ ++ D+WS G++ I+ G P+ + + R++ R + P P PE
Sbjct: 341 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG----YRMPRPENCPE 396
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 144 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 201 IYTHQSDVWSYGVTVWELMTFGSKPY 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIV-AFCHLQG--VVHRDLKP 69
T + G L+D + SRG L D +++ L++ A +L+G VHRDL
Sbjct: 260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRDLAA 317
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSI 128
N L + ED KV DFGL+ Q + + APE L + ++ + D+WS
Sbjct: 318 RNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 372
Query: 129 GVITY 133
G++ +
Sbjct: 373 GILLW 377
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIV-AFCHLQG--VVHRDLKP 69
T + G L+D + SRG L D +++ L++ A +L+G VHRDL
Sbjct: 73 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRDLAA 130
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSI 128
N L + ED KV DFGL+ Q + + APE L + ++ + D+WS
Sbjct: 131 RNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 185
Query: 129 GVITY 133
G++ +
Sbjct: 186 GILLW 190
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 163 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 220 IYTHQSDVWSYGVTVWELMTFGSKPY 245
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 132 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPY 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 142 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 5 KLQHLFYSNSFLFFTRFCEGGELLDRILSR----GGRYLEEDAKTIVEKILNIVAFCHLQ 60
+L + +++ T+ G LLD + G +YL I E + + +
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGM----NYLEDR 133
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLH 116
+VHRDL N L T + +K+ DFGL+ + +++ G + +LH
Sbjct: 134 RLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 117 RSYNVEGDMWSIGVITYILLC-GSRPF 142
R Y + D+WS GV + L+ GS+P+
Sbjct: 191 RIYTHQSDVWSYGVTVWELMTFGSKPY 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFGL+ + +++ G + +LHR
Sbjct: 172 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 229 IYTHQSDVWSYGVTVWELMTFGSKPY 254
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 31/140 (22%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG----VVHR 65
+ + + + C E +SRG YL ED V +C +G + HR
Sbjct: 103 YLKGNIITWNELCHVAE----TMSRGLSYLHED-----------VPWCRGEGHKPSIAHR 147
Query: 66 DLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI---VGSAYYVAPEVLHRSYNVE 122
D K +N L + D + DFGL+ P + D VG+ Y+APEVL + N +
Sbjct: 148 DFKSKNVLLKS---DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQ 204
Query: 123 G------DMWSIGVITYILL 136
DM+++G++ + L+
Sbjct: 205 RDAFLRIDMYAMGLVLWELV 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----- 100
I + N + F H +HRD+K N L +E K+ DFGL+ R ++
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA---RASEKFAQXVX 182
Query: 101 -NDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITYILLCG 138
+ IVG+ Y APE L + D++S GV+ ++ G
Sbjct: 183 XSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIV-AFCHLQG--VVHRDLKP 69
T + G L+D + SRG L D +++ L++ A +L+G VHRDL
Sbjct: 88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRDLAA 145
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVL-HRSYNVEGDMWSI 128
N L + ED KV DFGL+ Q + + APE L + ++ + D+WS
Sbjct: 146 RNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREKKFSTKSDVWSF 200
Query: 129 GVITY 133
G++ +
Sbjct: 201 GILLW 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 13 NSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIV-AFCHLQG--VVHRDLKP 69
T + G L+D + SRG L D +++ L++ A +L+G VHRDL
Sbjct: 79 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--LLKFSLDVCEAMEYLEGNNFVHRDLAA 136
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSI 128
N L + ED KV DFGL+ Q + + APE L + ++ + D+WS
Sbjct: 137 RNVLVS---EDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSF 191
Query: 129 GVITY 133
G++ +
Sbjct: 192 GILLW 196
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 10/160 (6%)
Query: 49 KILNIVAFCHLQG--VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGS 106
+IL + F H + ++HRDLK +N T +K+ D GL+ R ++G+
Sbjct: 137 QILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS-FAKAVIGT 193
Query: 107 AYYVAPEVLHRSYNVEGDMWSIGVITYILLCGSRPF-WARTESGIFRSVLRADPNFHDSP 165
+ APE Y+ D+++ G P+ + + I+R R +
Sbjct: 194 PEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYR---RVTSGVKPAS 250
Query: 166 WPSVS-PEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDEN 204
+ V+ PE K+ + + ++ +R + L H + +E
Sbjct: 251 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 43 AKTIVEKILNIVAFCHLQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP---DQ 98
K I +++L + + H + G++H D+KPEN L D+P +I ++D D+
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV--DSPENLIQIKIADLGNACWYDE 190
Query: 99 RLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF-------WARTESGI 150
+ + + Y +PEVL + + D+WS + + L+ G F + + + I
Sbjct: 191 HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 151 F--------------------------RSVLRADPNFHDSPWPSV-----------SPEA 173
R +LR P V + E
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
DF+ +L D RKR A + HPWL D
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 51/209 (24%)
Query: 43 AKTIVEKILNIVAFCHLQ-GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP---DQ 98
K I +++L + + H + G++H D+KPEN L D+P +I ++D D+
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV--DSPENLIQIKIADLGNACWYDE 190
Query: 99 RLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILLCGSRPF-------WARTESGI 150
+ + + Y +PEVL + + D+WS + + L+ G F + + + I
Sbjct: 191 HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 151 F--------------------------RSVLRADPNFHDSPWPSV-----------SPEA 173
R +LR P V + E
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEI 310
Query: 174 KDFVRRLLNKDHRKRMTAAQALTHPWLHD 202
DF+ +L D RKR A + HPWL D
Sbjct: 311 SDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Query: 15 FLFFTRFCEGG--ELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQG--VVHRDLKPE 70
FL T C+G E L ++ SRG + K I + V H Q ++HRDLK E
Sbjct: 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLK-IFYQTCRAVQHMHRQKPPIIHRDLKVE 167
Query: 71 NFLFTTREEDAPLKVIDFGLSDFVR--PD-----QRL----NDIV--GSAYYVAPEVLHR 117
N L + + +K+ DFG + + PD QR +I + Y PE++
Sbjct: 168 NLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL 224
Query: 118 SYNV----EGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEA 173
N + D+W++G I Y+L PF + I P HD+ +
Sbjct: 225 YSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPP--HDTQYTVF---- 278
Query: 174 KDFVRRLLNKDHRKRMTAAQAL 195
+R +L + +R++ A+ +
Sbjct: 279 HSLIRAMLQVNPEERLSIAEVV 300
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNI-------------VAFCH 58
+ FC+ G L + S+ ++ + + + L + + F
Sbjct: 106 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA 165
Query: 59 LQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-V 114
+ +HRDL N L + E +K+ DFGL+ + D R D ++APE +
Sbjct: 166 SRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 222
Query: 115 LHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y ++ D+WS GV+ + I G+ P+
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 160 CIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 216
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 160 CIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 216
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D N G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 169 CIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 169 CIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 13/166 (7%)
Query: 1 MYHQKLQHLFYSNS---FLFFTRFCEGGELLDRILSRGGRYLE-EDAKTIVEKILNIVAF 56
+ H KL L+ S T + G LLD + GR L+ + + ++ +A+
Sbjct: 61 LKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPE 113
+HRDL+ N L K+ DFGL+ + D G+ + + APE
Sbjct: 121 IERMNYIHRDLRSANILVGN---GLICKIADFGLARLIE-DNEXTARQGAKFPIKWTAPE 176
Query: 114 V-LHRSYNVEGDMWSIGV-ITYILLCGSRPFWARTESGIFRSVLRA 157
L+ + ++ D+WS G+ +T ++ G P+ + V R
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG 222
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 160 CIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 216
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 217 VYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 27/153 (17%)
Query: 11 YSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV--------------EKILNIVAF 56
+ L T +C G+LL+ L R R LE D + ++ +AF
Sbjct: 121 HGGPVLVITEYCCYGDLLN-FLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAF 179
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----YYVA 111
+ +HRD+ N L T K+ DFGL+ + D N IV G+A ++A
Sbjct: 180 LASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMA 234
Query: 112 PE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
PE + Y V+ D+WS G++ + I G P+
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 27/153 (17%)
Query: 11 YSNSFLFFTRFCEGGELLDRILSRGGRYLEED-AKTIVEKILNI-------------VAF 56
+ L T +C G+LL+ L R R LE D A I L+ +AF
Sbjct: 121 HGGPVLVITEYCCYGDLLN-FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAF 179
Query: 57 CHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----YYVA 111
+ +HRD+ N L T K+ DFGL+ + D N IV G+A ++A
Sbjct: 180 LASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMA 234
Query: 112 PE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
PE + Y V+ D+WS G++ + I G P+
Sbjct: 235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
F EGG L +++ + G E+ A + + L + + H + ++H D+K +N L ++
Sbjct: 143 IFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 201
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIV------GSAYYVAPE-VLHRSYNVEGDMWSIG 129
A L DFG + ++PD ++ G+ ++APE V+ + + + D+WS
Sbjct: 202 DGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 259
Query: 130 VITYILLCGSRPF 142
+ +L G P+
Sbjct: 260 CMMLHMLNGCHPW 272
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
F EGG L +++ + G E+ A + + L + + H + ++H D+K +N L ++
Sbjct: 141 IFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 199
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIV------GSAYYVAPE-VLHRSYNVEGDMWSIG 129
A L DFG + ++PD ++ G+ ++APE V+ + + + D+WS
Sbjct: 200 DGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 257
Query: 130 VITYILLCGSRPF 142
+ +L G P+
Sbjct: 258 CMMLHMLNGCHPW 270
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVG 105
++ + F + +HRDL N L + E +K+ DFGL+ + D R D
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 106 SAYYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 215 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY 220
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR--------PD 97
+ +++++ + + H + +HRD+KP+NFL ++ + +IDFGL+ R P
Sbjct: 108 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 167
Query: 98 QRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
+ ++ G+A Y + L + D+ S+G + GS P+
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR--------PD 97
+ +++++ + + H + +HRD+KP+NFL ++ + +IDFGL+ R P
Sbjct: 110 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 169
Query: 98 QRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
+ ++ G+A Y + L + D+ S+G + GS P+
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 169 CIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 225
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHR 117
+VHRDL N L T + +K+ DFG + + +++ G + +LHR
Sbjct: 142 LVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 118 SYNVEGDMWSIGVITYILLC-GSRPF 142
Y + D+WS GV + L+ GS+P+
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPY 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 10/133 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
F EGG L +++ + G E+ A + + L + + H + ++H D+K +N L ++
Sbjct: 127 IFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS 185
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIV------GSAYYVAPE-VLHRSYNVEGDMWSIG 129
A L DFG + ++PD ++ G+ ++APE V+ + + + D+WS
Sbjct: 186 DGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243
Query: 130 VITYILLCGSRPF 142
+ +L G P+
Sbjct: 244 CMMLHMLNGCHPW 256
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 206 CIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 262
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 263 VYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 31/140 (22%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVA-FCHL-------QG---VVHR 65
T + E G L D + S DAK++++ + V+ CHL QG + HR
Sbjct: 112 LITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 66 DLKPENFLFTTREEDAPLKVIDFGL-----SDFVRPDQRLNDIVGSAYYVAPEVLHRSYN 120
DLK +N L +++ + D GL SD D N VG+ Y+ PEVL S N
Sbjct: 167 DLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLN 223
Query: 121 -------VEGDMWSIGVITY 133
+ DM+S G+I +
Sbjct: 224 RNHFQSYIMADMYSFGLILW 243
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVR--------PD 97
+ +++++ + + H + +HRD+KP+NFL ++ + +IDFGL+ R P
Sbjct: 110 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 169
Query: 98 QRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
+ ++ G+A Y + L + D+ S+G + GS P+
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYVAPE-VLHRS 118
+HRDL N L + E +K+ DFGL+ + D R D ++APE + R
Sbjct: 166 IHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 222
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSD--FVRPDQ-RLNDIVGSAYYVAPE-VLHR 117
+HRDL N L + E +K+ DFGL+ + PD R D ++APE + R
Sbjct: 169 CIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDR 225
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y ++ D+WS GV+ + I G+ P+
Sbjct: 226 VYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ---RLNDIVGSAYYV 110
+ F + +HRDL N L + E +K+ DFGL+ + D R D ++
Sbjct: 157 MEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWM 213
Query: 111 APE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
APE + R Y ++ D+WS GV+ + I G+ P+
Sbjct: 214 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HRDL N
Sbjct: 82 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 139
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 140 CLVG---ENHLVKVADFGLSRLMTGDTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 128 IGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
GV+ W G+ SP+P + P V LL KD+R
Sbjct: 196 FGVL----------LWEIATYGM-------------SPYPGIDPSQ---VYELLEKDYR 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 39/179 (21%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HRDL N
Sbjct: 82 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 139
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 140 CLVG---ENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 195
Query: 128 IGVITYILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAKDFVRRLLNKDHR 186
GV+ W G+ SP+P + P V LL KD+R
Sbjct: 196 FGVL----------LWEIATYGM-------------SPYPGIDPSQ---VYELLEKDYR 228
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----ND 102
++I +A+ H Q +HRDL N L + D +K+ DFGL+ V D
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEXYRVRED 196
Query: 103 IVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILL 136
++ APE L + D+WS GV Y LL
Sbjct: 197 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 26/126 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
I ++I + + Q VHRDL N L E+ +K+ DFG+S D+
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMS---------RDVYS 180
Query: 106 SAYY------------VAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIF 151
+ YY + PE +++R + E D+WS+GV+ + I G +P++ + + +
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
Query: 152 RSVLRA 157
+ +
Sbjct: 241 ECITQG 246
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----Y 108
+AF + +HRDL N L T K+ DFGL+ ++ D N +V G+A
Sbjct: 181 MAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARHIKNDS--NYVVKGNARLPVK 235
Query: 109 YVAPE-VLHRSYNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPW 166
++APE + + Y E D+WS G+ + L GS P+ F +++
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--- 292
Query: 167 PSVSP-EAKDFVRRLLNKDHRKRMTAAQ 193
P +P E D ++ + D KR T Q
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 172 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRI 228
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL 100
ED ++ + F + VHRDL N L T +K+ DFGL+ + D
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDS-- 226
Query: 101 NDIV-GSA----YYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPF 142
N +V G+A ++APE L Y ++ D+WS G++ + I G P+
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 11 YSNSFLFFTRFCEGGELLDRILSRG--------GRYLE-EDAKTIVEKILNIVAFCHLQG 61
+ L T +C G+LL+ + + GR LE D ++ +AF +
Sbjct: 113 HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 172
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----YYVAPE-VL 115
+HRD+ N L T K+ DFGL+ + D N IV G+A ++APE +
Sbjct: 173 CIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIF 227
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
Y V+ D+WS G++ + I G P+
Sbjct: 228 DCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 11 YSNSFLFFTRFCEGGELLDRILSRG--------GRYLE-EDAKTIVEKILNIVAFCHLQG 61
+ L T +C G+LL+ + + GR LE D ++ +AF +
Sbjct: 121 HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 180
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----YYVAPE-VL 115
+HRD+ N L T K+ DFGL+ + D N IV G+A ++APE +
Sbjct: 181 CIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDS--NYIVKGNARLPVKWMAPESIF 235
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
Y V+ D+WS G++ + I G P+
Sbjct: 236 DCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 61/108 (56%), Gaps = 11/108 (10%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTR--EEDAPLKVIDFGLS-DFVRPDQRLN- 101
I ++L+ + + H + +++RD+KPENFL + +++ + +IDFGL+ +++ P+ + +
Sbjct: 102 IAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHI 161
Query: 102 ------DIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
+ G+A Y++ L + + D+ ++G + L GS P+
Sbjct: 162 PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 209
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSD--FVRPDQ-RLNDIVGSAYYV 110
+ F + +HRDL N L + E+ +K+ DFGL+ + PD R D ++
Sbjct: 212 MEFLSSRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWM 268
Query: 111 APE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
APE + + Y+ + D+WS GV+ + I G P+
Sbjct: 269 APESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 163 QKCIHRDLTARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 219
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 220 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 168 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 224
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 225 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 34/145 (23%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
+ +I + + + + +HRDL N L E+ +KV DFGLS + D G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTXTAH-AG 169
Query: 106 SAY---YVAPEVL-HRSYNVEGDMWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNF 161
+ + + APE L + ++++ D+W+ GV+ W G+
Sbjct: 170 AKFPIKWTAPESLAYNKFSIKSDVWAFGVL----------LWEIATYGM----------- 208
Query: 162 HDSPWPSVSPEAKDFVRRLLNKDHR 186
SP+P + P V LL KD+R
Sbjct: 209 --SPYPGIDPSQ---VYELLEKDYR 228
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 222 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 278
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 279 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 165 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 221
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 222 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +K+ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 89 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 147 CLVG---ENHLVKVADFGLSRLMTGDTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 45 TIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS------DFVRPDQ 98
I ++ +A+ + VHRDL N L E+ +K+ DFGLS D+ + D
Sbjct: 178 CIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADG 234
Query: 99 RLNDIVGSAYYVAPEVLHRSYNVEGDMWSIGVITY-ILLCGSRPFWA 144
ND + + + + Y E D+W+ GV+ + I G +P++
Sbjct: 235 --NDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----Y 108
+AF + +HRDL N L T K+ DFGL+ ++ D N +V G+A
Sbjct: 181 MAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDS--NYVVKGNARLPVK 235
Query: 109 YVAPE-VLHRSYNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPW 166
++APE + + Y E D+WS G+ + L GS P+ F +++
Sbjct: 236 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--- 292
Query: 167 PSVSP-EAKDFVRRLLNKDHRKRMTAAQ 193
P +P E D ++ + D KR T Q
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----Y 108
+AF + +HRDL N L T K+ DFGL+ ++ D N +V G+A
Sbjct: 176 MAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDS--NYVVKGNARLPVK 230
Query: 109 YVAPE-VLHRSYNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPW 166
++APE + + Y E D+WS G+ + L GS P+ F +++
Sbjct: 231 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--- 287
Query: 167 PSVSP-EAKDFVRRLLNKDHRKRMTAAQ 193
P +P E D ++ + D KR T Q
Sbjct: 288 PEHAPAEMYDIMKTCWDADPLKRPTFKQ 315
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 84 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 142 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 89 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 147 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----ND 102
++I +A+ H Q +HR+L N L + D +K+ DFGL+ V D
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 103 IVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILL 136
++ APE L + D+WS GV Y LL
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 172 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 157 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 213
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 165 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 221
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 164 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 220
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 172 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 84 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 142 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 88 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 145
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 146 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 201
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 202 FGVLLWEIATYGMSPY 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 161 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 217
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 86 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 143
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 144 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 85 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 142
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 143 CLVG---ENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 199 FGVLLWEIATYGMSPY 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----Y 108
+AF + +HRDL N L T K+ DFGL+ ++ D N +V G+A
Sbjct: 158 MAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDS--NYVVKGNARLPVK 212
Query: 109 YVAPE-VLHRSYNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPW 166
++APE + + Y E D+WS G+ + L GS P+ F +++
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--- 269
Query: 167 PSVSP-EAKDFVRRLLNKDHRKRMTAAQ 193
P +P E D ++ + D KR T Q
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQ 297
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 97 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 154
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 155 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 210
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 211 FGVLLWEIATYGMSPY 226
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 172 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 228
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 86 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 143
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 144 CLVG---ENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL-HRS 118
+HRDL N L T ED +K+ DFGL+ D D G ++APE L R
Sbjct: 213 IHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI 269
Query: 119 YNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I G P+
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 54 VAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA----Y 108
+AF + +HRDL N L T K+ DFGL+ ++ D N +V G+A
Sbjct: 174 MAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDS--NYVVKGNARLPVK 228
Query: 109 YVAPE-VLHRSYNVEGDMWSIGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPW 166
++APE + + Y E D+WS G+ + L GS P+ F +++
Sbjct: 229 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS--- 285
Query: 167 PSVSP-EAKDFVRRLLNKDHRKRMTAAQ 193
P +P E D ++ + D KR T Q
Sbjct: 286 PEHAPAEMYDIMKTCWDADPLKRPTFKQ 313
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 86 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 143
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 144 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 199
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 200 FGVLLWEIATYGMSPY 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 89 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 147 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLF---TTREEDAPLKVIDFGLS-DFVRPDQRLN 101
I +++ + + H + +++RD+KPENFL T+ + A + +IDFGL+ +++ P+ + +
Sbjct: 105 IAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHA-IHIIDFGLAKEYIDPETKKH 163
Query: 102 -------DIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPF 142
+ G+A Y++ L + + D+ ++G + L GS P+
Sbjct: 164 IPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 212
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----ND 102
++I +A+ H Q +HR+L N L + D +K+ DFGL+ V D
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 103 IVGSAYYVAPEVLHR-SYNVEGDMWSIGVITYILL 136
++ APE L + D+WS GV Y LL
Sbjct: 180 GDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 139 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 167 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 224 KFSVASDVWSFGVVLYELF 242
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 142 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 199 KFSVASDVWSFGVVLYELF 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 143 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 200 KFSVASDVWSFGVVLYELF 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 139 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 134 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 191 KFSVASDVWSFGVVLYELF 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 154 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 211 KFSVASDVWSFGVVLYELF 229
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 136 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 135 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 192 KFSVASDVWSFGVVLYELF 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 141 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 198 KFSVASDVWSFGVVLYELF 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 136 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 154 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 211 KFSVASDVWSFGVVLYELF 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKT--IVEKILNIVAFCHLQGVVHRDLKPENFLF 74
T C+G L + R + + + KT I ++I+ + + H +G++H+DLK +N +
Sbjct: 106 IITSLCKGRTLYSVV--RDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163
Query: 75 TTREEDAPLKVIDFGLSDFV------RPDQRLNDIVGSAYYVAPEVLHR----------S 118
++ + + DFGL R + +L G ++APE++ +
Sbjct: 164 ----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLP 219
Query: 119 YNVEGDMWSIGVITYILLCGSRPFWAR-TESGIFRSVLRADPNF 161
++ D++++G I Y L PF + E+ I++ PN
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL 263
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 140 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 197 KFSVASDVWSFGVVLYELF 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
FF R E+ +R+ +G E+ ++ I + H +G HRDLKP N L
Sbjct: 111 FFKRGTLWNEI-ERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG- 168
Query: 77 REEDAPLKVIDFGLSDFV-------RPDQRLNDIVG---SAYYVAPEVL----HRSYNVE 122
+E P+ ++D G + R L D + Y APE+ H +
Sbjct: 169 -DEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER 226
Query: 123 GDMWSIGVITYILLCGSRPF 142
D+WS+G + Y ++ G P+
Sbjct: 227 TDVWSLGCVLYAMMFGEGPY 246
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 139 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 196 KFSVASDVWSFGVVLYELF 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 28/134 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
+ +I + +A+ + + VHRDL N + D +K+ DFG++ DI
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMT---------RDIYE 182
Query: 106 SAYY------------VAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIF 151
+AYY +APE L + DMWS GV+ + I +P+ + +
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 152 RSVLRADPNFHDSP 165
+ V+ D + D P
Sbjct: 243 KFVM--DGGYLDQP 254
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 25 GELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPENFLFT--TREE 79
G L+ +L GR KT+ +++L V H + +V+RD+KP+NFL +
Sbjct: 88 GPSLEDLLDLCGRKFS--VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKN 145
Query: 80 DAPLKVIDFGLSDFVR--------PDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGV 130
+ V+DFG+ F R P + ++ G+A Y++ L R + D+ ++G
Sbjct: 146 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 205
Query: 131 ITYILLCGSRPFWA 144
+ L GS P+
Sbjct: 206 VFMYFLRGSLPWQG 219
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 60 QGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIVG--SAYYVAPEVL- 115
Q +HRDL N L T E+ +++ DFGL+ D D G ++APE L
Sbjct: 176 QKCIHRDLAARNVLVT---ENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF 232
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
R Y + D+WS GV+ + I G P+
Sbjct: 233 DRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 25 GELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPENFLFT--TREE 79
G L+ +L GR KT+ +++L V H + +V+RD+KP+NFL +
Sbjct: 89 GPSLEDLLDLCGRKFS--VKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKN 146
Query: 80 DAPLKVIDFGLSDFVR--------PDQRLNDIVGSAYYVAPEV-LHRSYNVEGDMWSIGV 130
+ V+DFG+ F R P + ++ G+A Y++ L R + D+ ++G
Sbjct: 147 ANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206
Query: 131 ITYILLCGSRPFWA 144
+ L GS P+
Sbjct: 207 VFMYFLRGSLPWQG 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HRDL N
Sbjct: 84 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 142 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HRDL N
Sbjct: 84 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 142 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 197
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 198 FGVLLWEIATYGMSPY 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HRDL N
Sbjct: 89 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 147 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----ND 102
++I +A+ H Q +HR L N L + D +K+ DFGL+ V D
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVRED 174
Query: 103 IVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILL 136
++ APE L + D+WS GV Y LL
Sbjct: 175 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 47 VEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRL----ND 102
++I +A+ H Q +HR L N L + D +K+ DFGL+ V D
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVRED 173
Query: 103 IVGSAYYVAPEVLHRS-YNVEGDMWSIGVITYILL 136
++ APE L + D+WS GV Y LL
Sbjct: 174 GDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HRDL N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 136 IHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 193 KFSVASDVWSFGVVLYELF 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 26/126 (20%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
I +I + + + Q VHRDL N L + +K+ DFG+S D+
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS---------RDVYS 185
Query: 106 SAYY------------VAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIF 151
+ YY + PE +++R + E D+WS GVI + I G +P++ + + +
Sbjct: 186 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI 245
Query: 152 RSVLRA 157
+ +
Sbjct: 246 ECITQG 251
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 99 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 157
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 158 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 215 SFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 99 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 157
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 158 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 215 SFGVLMWEAFSYGQKPY 231
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 97 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 155
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 156 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 213 SFGVLMWEAFSYGQKPY 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHRDL N + D +K+ DFG++ D D
Sbjct: 132 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 246
Query: 161 FHDSP 165
+ D P
Sbjct: 247 YLDQP 251
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHRDL N + D +K+ DFG++ D D
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 249
Query: 161 FHDSP 165
+ D P
Sbjct: 250 YLDQP 254
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 20/166 (12%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 150
Query: 77 REEDAPLKVIDFGL--------SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWS 127
R+ +K+ DFGL +V + R + APE L R+++ D W
Sbjct: 151 RDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESLKTRTFSHASDTWM 203
Query: 128 IGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
GV + + G P+ S I + D P P P+
Sbjct: 204 FGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGERLPRPEDCPQ 246
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 83 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 142 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 199 SFGVLMWEAFSYGQKPY 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 83 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 141
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 142 VLLVTQHY---AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 199 SFGVLMWEAFSYGQKPY 215
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 89 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 147
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 148 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 205 SFGVLMWEAFSYGQKPY 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHRDL N + D +K+ DFG++ D D
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 249
Query: 161 FHDSP 165
+ D P
Sbjct: 250 YLDQP 254
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 79 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 137
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 138 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 195 SFGVLMWEAFSYGQKPY 211
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 20/166 (12%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 77 REEDAPLKVIDFGL--------SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWS 127
R+ +K+ DFGL +V + R + APE L R+++ D W
Sbjct: 147 RDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESLKTRTFSHASDTWM 199
Query: 128 IGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
GV + + G P+ S I + D P P P+
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGERLPRPEDCPQ 242
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 77 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 135
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 136 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 193 SFGVLMWEAFSYGQKPY 209
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVA---FCHLQGVVHRDLKPENFLFTTR 77
+GG+ L + + G R KT+++ + + A + + +HRDL N L T
Sbjct: 193 LVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT-- 247
Query: 78 EEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---------YVAPEVLHRS-YNVEGDMWS 127
E LK+ DFG+S + D V +A + APE L+ Y+ E D+WS
Sbjct: 248 -EKNVLKISDFGMS------REEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWS 300
Query: 128 IGVITY-ILLCGSRPF 142
G++ + G+ P+
Sbjct: 301 FGILLWETFSLGASPY 316
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV-----EKILNIVAFCHLQGVVHRDLKP 69
F T + G LLD L R E+ +V +I + + + + +HRDL
Sbjct: 103 FYIVTEYMPYGNLLD-YLRECNR---EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAA 158
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDM 125
N L E+ +KV DFGLS + D G+ + + APE L + +++++ D+
Sbjct: 159 RNCLVG---ENHVVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 126 WSIGVITY-ILLCGSRPF 142
W+ GV+ + I G P+
Sbjct: 215 WAFGVLLWEIATYGMSPY 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 24/135 (17%)
Query: 10 FYSNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKP 69
F + + + C E ++RG YL ED + + H + HRD+K
Sbjct: 112 FLKANVVSWNELCHIAE----TMARGLAYLHEDIPGLKDG--------HKPAISHRDIKS 159
Query: 70 ENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI---VGSAYYVAPEVLHRSYNVEG--- 123
+N L + + + DFGL+ + D VG+ Y+APEVL + N +
Sbjct: 160 KNVLL---KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF 216
Query: 124 ---DMWSIGVITYIL 135
DM+++G++ + L
Sbjct: 217 LRIDMYAMGLVLWEL 231
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 20/166 (12%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 77 REEDAPLKVIDFGL--------SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWS 127
R+ +K+ DFGL +V + R + APE L R+++ D W
Sbjct: 147 RDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESLKTRTFSHASDTWM 199
Query: 128 IGVITYILLC-GSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPE 172
GV + + G P+ S I + D P P P+
Sbjct: 200 FGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGERLPRPEDCPQ 242
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLF--TTREEDAPLKVIDFGLS-DFVRPDQRLN- 101
I ++++ + + H + +++RD+KPENFL + + +IDFGL+ +++ P+ + +
Sbjct: 110 IAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHI 169
Query: 102 ------DIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWA 144
+ G+A Y++ L + + D+ ++G + L GS P+
Sbjct: 170 PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 17/148 (11%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 156
Query: 77 REEDAPLKVIDFGL--------SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWS 127
R+ +K+ DFGL +V + R + APE L R+++ D W
Sbjct: 157 RDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESLKTRTFSHASDTWM 209
Query: 128 IGVITYILLC-GSRPFWARTESGIFRSV 154
GV + + G P+ S I +
Sbjct: 210 FGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 57/148 (38%), Gaps = 17/148 (11%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 150
Query: 77 REEDAPLKVIDFGL--------SDFVRPDQRLNDIVGSAYYVAPEVLH-RSYNVEGDMWS 127
R+ +K+ DFGL +V + R + APE L R+++ D W
Sbjct: 151 RDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFA----WCAPESLKTRTFSHASDTWM 203
Query: 128 IGVITYILLC-GSRPFWARTESGIFRSV 154
GV + + G P+ S I +
Sbjct: 204 FGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 441 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 499
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 500 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 557 SFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 12 SNSFLFFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPEN 71
+ S++ E G L ++ L + +++ +V ++ + + VHRDL N
Sbjct: 442 AESWMLVMEMAELGPL-NKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 500
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVL-HRSYNVEGDMW 126
L T+ K+ DFGLS +R D+ + APE + + ++ + D+W
Sbjct: 501 VLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
Query: 127 SIGVITYILLC-GSRPF 142
S GV+ + G +P+
Sbjct: 558 SFGVLMWEAFSYGQKPY 574
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----VGSAYYVAPEVLHR 117
VHRDL N L E +A +K+ DFGL+ + D+ + ++ APE L
Sbjct: 132 CVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 118 S-YNVEGDMWSIGVITYIL 135
+ ++ + D+WS GV+ Y L
Sbjct: 189 NIFSRQSDVWSFGVVLYEL 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HR+L N
Sbjct: 288 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARN 345
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 346 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 401
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 402 FGVLLWEIATYGMSPY 417
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E +A ++ +I + + + + +HR+L N
Sbjct: 330 FYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARN 387
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 388 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 443
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 444 FGVLLWEIATYGMSPY 459
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD-QRLNDIVGSAYYVAPEVLH-RSY 119
+VHRDLK N L + +KV DFGLS G+ ++APEVL
Sbjct: 160 IVHRDLKSPNLLVDKKYT---VKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 120 NVEGDMWSIGVITYILLCGSRPF 142
N + D++S GVI + L +P+
Sbjct: 217 NEKSDVYSFGVILWELATLQQPW 239
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 21 FCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVA---FCHLQGVVHRDLKPENFLFTTR 77
+GG+ L + + G R KT+++ + + A + + +HRDL N L T
Sbjct: 193 LVQGGDFLTFLRTEGARL---RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT-- 247
Query: 78 EEDAPLKVIDFGLS-----DFVRPDQRLNDIVGSAYYVAPEVLHRS-YNVEGDMWSIGVI 131
E LK+ DFG+S L + + APE L+ Y+ E D+WS G++
Sbjct: 248 -EKNVLKISDFGMSREEADGVYAASGGLRQV--PVKWTAPEALNYGRYSSESDVWSFGIL 304
Query: 132 TY-ILLCGSRPF 142
+ G+ P+
Sbjct: 305 LWETFSLGASPY 316
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIVGSA-----YYVAPEVLH-RSYNVEGDMWSIGV 130
R+ +K+ DFGL + P + ++ + APE L R+++ D W GV
Sbjct: 147 RDL---VKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGV 202
Query: 131 ITYILLC-GSRPFWARTESGIFRSV 154
+ + G P+ S I +
Sbjct: 203 TLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 89 FYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 146
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 147 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 202
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 203 FGVLLWEIATYGMSPY 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Query: 17 FFTRFCEGGELLDRILSRGGRYLEEDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTT 76
T G LLDR+ G +L ++ + + + +HRDL N L T
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 156
Query: 77 REEDAPLKVIDFGLSDFVRPDQRLNDIVGSA-----YYVAPEVLH-RSYNVEGDMWSIGV 130
R+ +K+ DFGL + P + ++ + APE L R+++ D W GV
Sbjct: 157 RDL---VKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGV 212
Query: 131 ITYILLC-GSRPFWARTESGIFRSV 154
+ + G P+ S I +
Sbjct: 213 TLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----VGSAYYVAPEVLHR 117
VHRDL N L E +A +K+ DFGL+ + D+ + ++ APE L
Sbjct: 148 CVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 118 S-YNVEGDMWSIGVITYILL 136
+ ++ + D+WS GV+ Y L
Sbjct: 205 NIFSRQSDVWSFGVVLYELF 224
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 56 FCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQ-RLNDIV-GSAYYVAP 112
+ H + ++HRD+K N L +E+ K+ DFG+S DQ L +V G+ Y+ P
Sbjct: 154 YLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 113 EVLHRSYNVE-GDMWSIGVITYILLCG 138
E + E D++S GV+ + +LC
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----VGSAYYVAPEVLHR 117
VHRDL N L E +A +K+ DFGL+ + D+ + ++ APE L
Sbjct: 135 CVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 118 S-YNVEGDMWSIGVITYILL 136
+ ++ + D+WS GV+ Y L
Sbjct: 192 NIFSRQSDVWSFGVVLYELF 211
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F F G LLD + R E +A ++ +I + + + + +HRDL N
Sbjct: 85 FYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN 142
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 143 CLVG---ENHLVKVADFGLSRLMTGDTXTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 198
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 199 FGVLLWEIATYGMSPY 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 15 FLFFTRFCEGGELLDRILSRGGRYLEEDAKTIV---EKILNIVAFCHLQGVVHRDLKPEN 71
F T F G LLD + R E A ++ +I + + + + +HR+L N
Sbjct: 291 FYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARN 348
Query: 72 FLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAY---YVAPEVL-HRSYNVEGDMWS 127
L E+ +KV DFGLS + D G+ + + APE L + ++++ D+W+
Sbjct: 349 CLVG---ENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSDVWA 404
Query: 128 IGVITY-ILLCGSRPF 142
GV+ + I G P+
Sbjct: 405 FGVLLWEIATYGMSPY 420
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHRDL N + D +K+ DFG++ D D
Sbjct: 134 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 248
Query: 161 FHDSP 165
+ D P
Sbjct: 249 YLDQP 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI----VGSAYYVAPEVLHR 117
VHRDL N L E +A +K+ DFGL+ + D+ + ++ APE L
Sbjct: 136 CVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 118 S-YNVEGDMWSIGVITYILL 136
+ ++ + D+WS GV+ Y L
Sbjct: 193 NIFSRQSDVWSFGVVLYELF 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
+ +I + + + + +HRDL N L E+ +KV DFGLS + D G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAH-AG 171
Query: 106 SAY---YVAPEVL-HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
+ + + APE L + ++++ D+W+ GV+ + I G P+
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVG 105
+ +I + + + + +HRDL N L E+ +KV DFGLS + D G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAH-AG 171
Query: 106 SAY---YVAPEVL-HRSYNVEGDMWSIGVITY-ILLCGSRPF 142
+ + + APE L + ++++ D+W+ GV+ + I G P+
Sbjct: 172 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHRDL N + D +K+ DFG++ D D
Sbjct: 135 MAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 249
Query: 161 FHDSP 165
+ D P
Sbjct: 250 YLDQP 254
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 29/164 (17%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYY------------V 110
VHRDL N L + +K+ DFG+S DI + YY +
Sbjct: 157 VHRDLATRNCLVG---QGLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWM 204
Query: 111 APE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS 168
PE +L+R + E D+WS GV+ + I G +P++ + + + + P
Sbjct: 205 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP- 263
Query: 169 VSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDIL 212
PE +R ++ ++R + + PV LD+L
Sbjct: 264 --PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 305
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSA----YYVAPEVLHRS 118
+HR+L N L E + +K+ DFGL+ + D+ + ++ APE L S
Sbjct: 137 IHRNLATRNILV---ENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 119 -YNVEGDMWSIGVITYILL 136
++V D+WS GV+ Y L
Sbjct: 194 KFSVASDVWSFGVVLYELF 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 29/164 (17%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIVGSAYY------------V 110
VHRDL N L + +K+ DFG+S DI + YY +
Sbjct: 151 VHRDLATRNCLVG---QGLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWM 198
Query: 111 APE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPS 168
PE +L+R + E D+WS GV+ + I G +P++ + + + + P
Sbjct: 199 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP- 257
Query: 169 VSPEAKDFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDIL 212
PE +R ++ ++R + + PV LD+L
Sbjct: 258 --PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 299
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 20/90 (22%)
Query: 61 GVVHRDLKPENFLFTTREEDAPLKVIDFGLS------DFVRPDQRLNDI---VGSAYYVA 111
+ HRDL N L + D + DFGLS VRP + N VG+ Y+A
Sbjct: 140 AISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 112 PEVLHRSYNV--------EGDMWSIGVITY 133
PEVL + N+ + DM+++G+I +
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYW 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 17/158 (10%)
Query: 63 VHRDLKPENFLFTTREEDAPLKVIDFGLS------DFVRPDQRLNDIVGSAYYVAPE-VL 115
VHRDL N L + +K+ DFG+S D+ R R + ++ PE +L
Sbjct: 180 VHRDLATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI---RWMPPESIL 233
Query: 116 HRSYNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPNFHDSPWPSVSPEAK 174
+R + E D+WS GV+ + I G +P++ + + + + P PE
Sbjct: 234 YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP---PEVY 290
Query: 175 DFVRRLLNKDHRKRMTAAQALTHPWLHDENRPVPLDIL 212
+R ++ ++R + + PV LD+L
Sbjct: 291 AIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 198
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVI 131
VG+ Y+APEVL S N++ D++++G++
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 233
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 211
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVI 131
VG+ Y+APEVL S N++ D++++G++
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 36 GRYLE-EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFV 94
GR LE D ++ +AF + +HRD+ N L T K+ DFGL+ +
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLARDI 208
Query: 95 RPDQRLNDIV-GSA----YYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
D N IV G+A ++APE + Y V+ D+WS G++ + I G P+
Sbjct: 209 MNDS--NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 173
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVI 131
VG+ Y+APEVL S N++ D++++G++
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 208
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 172
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVITY 133
VG+ Y+APEVL S N++ D++++G++ +
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 178
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVI 131
VG+ Y+APEVL S N++ D++++G++
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 213
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 19/95 (20%)
Query: 51 LNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDI------- 103
+ IV + HRDLK +N L +++ + D GL+ VR D + I
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLA--VRHDSATDTIDIAPNHR 175
Query: 104 VGSAYYVAPEVLHRSYNVE-------GDMWSIGVI 131
VG+ Y+APEVL S N++ D++++G++
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 210
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ 98
ED I KI IV H V+H DL NF+F D L +IDFGL D+
Sbjct: 431 EDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF-----DKDLYIIDFGLGKISNLDE 483
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 56 FCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRP--DQRLNDIV-GSAYYVAP 112
+ H + ++HRD+K N L +E+ K+ DFG+S L +V G+ Y+ P
Sbjct: 154 YLHTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 113 EVLHRSYNVE-GDMWSIGVITYILLCG 138
E + E D++S GV+ + +LC
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCA 237
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 41 EDAKTIVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQ 98
ED I KI IV H V+H DL NF+F D L +IDFGL D+
Sbjct: 426 EDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF-----DKDLYIIDFGLGKISNLDE 478
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLF--TTREEDAPLKVIDFGLS-DFVRPDQRLN- 101
I ++++ + + H + +++RD+KPENFL + + +IDF L+ +++ P+ + +
Sbjct: 131 IAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI 190
Query: 102 ------DIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWA 144
+ G+A Y++ L + + D+ ++G + L GS P+
Sbjct: 191 PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 240
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLF--TTREEDAPLKVIDFGLS-DFVRPDQRLN- 101
I ++++ + + H + +++RD+KPENFL + + +IDF L+ +++ P+ + +
Sbjct: 110 IAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI 169
Query: 102 ------DIVGSAYYVAPEV-LHRSYNVEGDMWSIGVITYILLCGSRPFWA 144
+ G+A Y++ L + + D+ ++G + L GS P+
Sbjct: 170 PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 27/110 (24%)
Query: 46 IVEKILNIVAFCHLQ--------GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD 97
IV I + +A H++ + HRDLK +N L +++ + D GL+ V
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLA--VMHS 193
Query: 98 QRLNDI-------VGSAYYVAPEVLHRSYNVEG-------DMWSIGVITY 133
Q N + VG+ Y+APEVL + V+ D+W+ G++ +
Sbjct: 194 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPD---QRLNDIVGSAYYVAPEVLHR 117
+VHRDL N L E +K+ DFGLS D D +R + + +
Sbjct: 171 LVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH 227
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I+ G P+
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPD---QRLNDIVGSAYYVAPEVLHR 117
+VHRDL N L E +K+ DFGLS D D +R + + +
Sbjct: 171 LVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDH 227
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I+ G P+
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 44/149 (29%)
Query: 46 IVEKILNIVAFCHLQ--------GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD 97
IV I + +A H++ + HRDLK +N L +++ + D GL+ V
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLA--VMHS 164
Query: 98 QRLNDI-------VGSAYYVAPEVLHRSYNVEG-------DMWSIGVITYILLCGSRPFW 143
Q N + VG+ Y+APEVL + V+ D+W+ G++ + +
Sbjct: 165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-------- 216
Query: 144 AR--TESGI-------FRSVLRADPNFHD 163
AR +GI F V+ DP+F D
Sbjct: 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 62 VVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPD---QRLNDIVGSAYYVAPEVLHR 117
+VHRDL N L E +K+ DFGLS D D +R + + +
Sbjct: 171 LVHRDLAARNILVA---EGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDH 227
Query: 118 SYNVEGDMWSIGVITY-ILLCGSRPF 142
Y + D+WS GV+ + I+ G P+
Sbjct: 228 IYTTQSDVWSFGVLLWEIVTLGGNPY 253
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHR+L N + D +K+ DFG++ D D
Sbjct: 135 MAAEIADGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 249
Query: 161 FHDSP 165
+ D P
Sbjct: 250 YLDQP 254
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 44/149 (29%)
Query: 46 IVEKILNIVAFCHLQ--------GVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPD 97
IV I + +A H++ + HRDLK +N L +++ + D GL+ V
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLA--VMHS 164
Query: 98 QRLNDI-------VGSAYYVAPEVLHRSYNVEG-------DMWSIGVITYILLCGSRPFW 143
Q N + VG+ Y+APEVL + V+ D+W+ G++ + +
Sbjct: 165 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV-------- 216
Query: 144 AR--TESGI-------FRSVLRADPNFHD 163
AR +GI F V+ DP+F D
Sbjct: 217 ARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 46 IVEKILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLS-DFVRPDQRLNDIV 104
+ +I + +A+ + + VHR+L N + D +K+ DFG++ D D
Sbjct: 136 MAAEIADGMAYLNAKKFVHRNLAARNCMVA---HDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 105 G--SAYYVAPEVLHRS-YNVEGDMWSIGVITY-ILLCGSRPFWARTESGIFRSVLRADPN 160
G ++APE L + DMWS GV+ + I +P+ + + + V+ D
Sbjct: 193 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGG 250
Query: 161 FHDSP 165
+ D P
Sbjct: 251 YLDQP 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 49 KILNIVAFCHLQGVVHRDLKPENFLFTTREEDAPLKVIDFGLSDFVRPDQRLNDIV-GSA 107
++ +AF + +HRD+ N L T K+ DFGL+ + D N IV G+A
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHV---AKIGDFGLARDIMNDS--NYIVKGNA 228
Query: 108 ----YYVAPE-VLHRSYNVEGDMWSIGVITY-ILLCGSRPF 142
++APE + Y V+ D+WS G++ + I G P+
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,598,548
Number of Sequences: 62578
Number of extensions: 410496
Number of successful extensions: 3797
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 366
Number of HSP's that attempted gapping in prelim test: 1435
Number of HSP's gapped (non-prelim): 1224
length of query: 389
length of database: 14,973,337
effective HSP length: 101
effective length of query: 288
effective length of database: 8,652,959
effective search space: 2492052192
effective search space used: 2492052192
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 52 (24.6 bits)