Your job contains 1 sequence.
>016477
MTRRCSHCSNNGHNSRTCPTRGGGSSPGVGGLKLFGVRLTDGSIIKKSASMGNLSALHYH
SSSSAAASPNPDSPLSDHVRDPNHLTDGYLSDDPAHGSGSSNRRCERKKVPCLLARRACA
GASLPLAFTFCLHMDVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQ
VASHAQKYFIRQSNATRRKRRSSLFDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQ
PSLNLSLSTEFEPMEAVCKETEKDSEEPVIDLNEFTPMVSSFFPAYMPVPYTYWPHNAAT
GEEDKDAGTSGNHPILKPIPILPKEPVNVDQLVCMSQLSIGETERGLREPSPLSLKLLGE
PSRQSAFHANAPVSRSDLSKGKTTPIQAV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016477
(389 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 617 1.5e-77 2
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 347 1.6e-49 2
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 305 4.0e-39 2
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 276 1.9e-35 3
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 278 1.6e-32 2
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 317 1.9e-28 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 307 2.2e-27 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 276 7.4e-27 2
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 288 2.2e-25 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 279 2.0e-24 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 269 2.3e-23 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 265 6.1e-23 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 265 6.1e-23 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 258 3.4e-22 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 256 5.5e-22 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 250 2.4e-21 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 236 7.2e-20 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 226 9.0e-19 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 229 1.0e-17 1
TAIR|locus:2075760 - symbol:AT3G10590 species:3702 "Arabi... 175 6.6e-13 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 179 1.2e-10 1
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 133 1.2e-06 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 120 3.7e-05 2
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 123 4.7e-05 1
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 121 0.00010 1
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 121 0.00012 1
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 116 0.00027 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 116 0.00028 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 117 0.00043 1
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 617 (222.3 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 142/260 (54%), Positives = 172/260 (66%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ GVPWTEEEHRLFL+GLQKLGKGDWRGI+RNYV SRTPTQVASHAQKYFIR ++++R
Sbjct: 132 ERKRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSR 191
Query: 198 RKRRSSLFDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQPSLNLSLS--TEFEPME 255
RKRRSSLFDMV D+M TD+ P EEQ + S ++E + S PSL LSL+ TE E +
Sbjct: 192 RKRRSSLFDMVTDEMVTDSSPTQEEQTLNGSSPSKEPEKKSYLPSLELSLNNTTEAEEVV 251
Query: 256 AVCKETEKDSEEPVIDLNEFTPMV--SSFFPAYMPVPYTYW-PHNAATGEEDKDAGTSGN 312
A EK S+E + N +PM+ FFP PV YT W P + E +A TS
Sbjct: 252 ATAPRQEK-SQEAIEPSNGVSPMLVPGGFFPPCFPVTYTIWLPASLHGTEHALNAETSSQ 310
Query: 313 -HXXXXXXXXXXXEPVNVDQLVCMSQLSIGETERGLRE--PSPLSLKLLGEPSRQSAFHA 369
H E VN+D+LV MSQLSIG R E PSPLSL+L EPSR SAFH+
Sbjct: 311 QHQVLKPKPGFAKERVNMDELVGMSQLSIGMATRHETETSPSPLSLRL--EPSRPSAFHS 368
Query: 370 NAPVSRSDLSKGKTTPIQAV 389
N V+ +DLSKG + IQA+
Sbjct: 369 NGSVNGADLSKGNSA-IQAI 387
Score = 182 (69.1 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 41/67 (61%), Positives = 42/67 (62%)
Query: 1 MTRRCSHCSNNGHNSRTCPTRXXXX---------------XXXXXXLKLFGVRLTDGSII 45
MTRRCSHCSNNGHNSRTCPTR +KLFGVRLTDGSII
Sbjct: 1 MTRRCSHCSNNGHNSRTCPTRGGGTCGGSGGGGGGGGGGGSGSSSAVKLFGVRLTDGSII 60
Query: 46 KKSASMG 52
KKSASMG
Sbjct: 61 KKSASMG 67
Score = 174 (66.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 45/92 (48%), Positives = 49/92 (53%)
Query: 32 LKLFGVRLTDGSIIKKSASMGXXXXXXXXXXXXX----------XXXXXXXXXXXXHVRD 81
+KLFGVRLTDGSIIKKSASMG H R
Sbjct: 47 VKLFGVRLTDGSIIKKSASMGNLSALAVAAAAATHHRLSPSSPLATSNLNDSPLSDHARY 106
Query: 82 PN-HLTDGYLSDDPAHGSGSSNRRCERKK-VP 111
N H +GYLSDDPAHGSGSS+RR ERK+ VP
Sbjct: 107 SNLHHNEGYLSDDPAHGSGSSHRRGERKRGVP 138
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 347 (127.2 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 74/136 (54%), Positives = 92/136 (67%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ G PWTEEEHR+FL+GLQKLGKGDWRGI+RNYV +RTPTQVASHAQKYFIRQSN +R
Sbjct: 91 ERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSR 150
Query: 198 RKRRSSLFDMVAD---DMATDTPPVPEEQVMLPSPL--ARESDNTSSQPSLNLSLSTEFE 252
RKRRSSLFDMV D D+ D E+ + + + + A T + SL+ E E
Sbjct: 151 RKRRSSLFDMVPDEVGDIPMDLQEPEEDNIPVETEMQGADSIHQTLAPSSLHAPSILEIE 210
Query: 253 PMEAVCKETEKDSEEP 268
E++ T + EP
Sbjct: 211 ECESM-DSTNSTTGEP 225
Score = 186 (70.5 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 50/110 (45%), Positives = 58/110 (52%)
Query: 1 MTRRCSHCSNNGHNSRTCPTRXXXXXXXXXXLKLFGVRLTDGSIIKKSASMGXXXXXXXX 60
MTRRCSHC++NGHNSRTCP R +KLFGVRLT+GSI +KSASMG
Sbjct: 1 MTRRCSHCNHNGHNSRTCPNRG---------VKLFGVRLTEGSI-RKSASMGNLSHYTGS 50
Query: 61 XXXXXXXXXXXXXXXXXHVRDPNHLT-DGYLSDDPAHGSGSSNRRCERKK 109
P+H+ DGY S+D GS SS ERKK
Sbjct: 51 GSGGHGTGSNTPGSPGDV---PDHVAGDGYASEDFVAGSSSSR---ERKK 94
Score = 151 (58.2 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 41/146 (28%), Positives = 67/146 (45%)
Query: 234 SDNTSSQPSLNLSLSTEFEPMEAVCKETEKDSEEPVIDLNEFTPMVSSFFPAYMPVPYTY 293
+++T+ +P+ + ++ +E + + +P + F + ++F Y P P+
Sbjct: 218 TNSTTGEPTATAAAASSSSRLEETTQLQSQLQPQPQLP-GSFPILYPTYFSPYYPFPFPI 276
Query: 294 WPHNAATGEEDKDAGTSGNHXXXXXXXXXXXEPVNVDQLVCMSQLSIGETERGLREPSPL 353
WP E K T H P+NVD+L+ MS+LS+ E+ + L
Sbjct: 277 WPAGYVP-EPPKKEET---HEILRPTAVHSKAPINVDELLGMSKLSLAESNKHGESDQSL 332
Query: 354 SLKLLG-EPSRQSAFHANAPVSRSDL 378
SLKL G SRQSAFH N SD+
Sbjct: 333 SLKLGGGSSSRQSAFHPNPSSDSSDI 358
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 305 (112.4 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 58/95 (61%), Positives = 71/95 (74%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ G PWTEEEHRLFL GL K+GKGDWRGI+RN+V +RTPTQVASHAQKYF+R++N R
Sbjct: 93 ERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNR 152
Query: 198 RKRRSSLFDMVADDMATDTPPVPEEQVMLPSPLAR 232
R+RRSSLFD+ D + E Q+ P L R
Sbjct: 153 RRRRSSLFDITPDSFIGSSKE--ENQLQTPLELIR 185
Score = 129 (50.5 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 44/118 (37%), Positives = 50/118 (42%)
Query: 1 MTRRCSHCSNNGHNSRTCPTRXXXXXXXXX------XLKLFGVRLTDGS--IIKKSASMG 52
M+R CS C NNGHNSRTCPT + LFGVR+T+ S +KS SM
Sbjct: 1 MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMN 60
Query: 53 XXXXXXXXXXXXXXXXXXXXXXXXXHVRDPNHLTDG-YLSDDPAHGSGSSNRRCERKK 109
DPN DG Y SDD H SG NR ERK+
Sbjct: 61 NLSQFD-------------------QTPDPNPTDDGGYASDDVVHASGR-NR--ERKR 96
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 276 (102.2 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 61/128 (47%), Positives = 82/128 (64%)
Query: 137 NKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNAT 196
++++ G PWTEEEHR FLIGL KLGKGDWRGIA+++V +RTPTQVASHAQKYFIR +
Sbjct: 102 HEKKKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVND 161
Query: 197 RRKRRSSLFDMVADDM----------ATDTPPVPEEQVMLPSPLARESDNTSSQPSLNLS 246
+RKRR+SLFD+ +D +T TPP + + P+ + T +
Sbjct: 162 KRKRRASLFDISLEDQKEKERNSQDASTKTPP-KQPITGIQQPVVQGHTQTEISNRFQ-N 219
Query: 247 LSTEFEPM 254
LS E+ P+
Sbjct: 220 LSMEYMPI 227
Score = 90 (36.7 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 1 MTRRCSHCSNNGHNSRTCPTRXXXXXXXXXXLKLFGVRLTDGSI-------IKKSASMG 52
+ + CSHC +NGHN+RTC +KLFGV ++ I ++KS S+G
Sbjct: 8 VAKTCSHCGHNGHNARTC-----LNGVNKASVKLFGVNISSDPIRPPEVTALRKSLSLG 61
Score = 43 (20.2 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 273 NEFTPMVSSFFPAYMPVPYTY 293
N F + + P Y P+P Y
Sbjct: 215 NRFQNLSMEYMPIYQPIPPYY 235
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 278 (102.9 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 51/72 (70%), Positives = 63/72 (87%)
Query: 139 RQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRR 198
R+ GVPWT EEHR FLIGL+KLGKGDWRGI+RN+V++++PTQVASHAQKYF+RQ+
Sbjct: 87 RKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHH 146
Query: 199 KRR-SSLFDMVA 209
KRR +SLFDMV+
Sbjct: 147 KRRRTSLFDMVS 158
Score = 93 (37.8 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 20/39 (51%), Positives = 23/39 (58%)
Query: 1 MTRRCSHCSNNGHNSRTCPTRXXXXXXXXXXLKLFGVRL 39
M RRCSHC N GHNSRTC + ++LFGV L
Sbjct: 1 MGRRCSHCGNVGHNSRTCSS------YQTRVVRLFGVHL 33
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 71/162 (43%), Positives = 102/162 (62%)
Query: 83 NHLTDGYLSDDPAHGSGSSNRRCERKKVPCLLARRACAGASLPLAFTFCLHMDVNKRQIG 142
N+L+D + + G + K P A A A +LP++ + + + +++ G
Sbjct: 43 NNLSDYEQTAETPKIDGEDRDEQDMNKTP---AGYASADEALPMSSS---NGKIERKR-G 95
Query: 143 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRS 202
VPWTEEEH+LFL+GLQ++GKGDW+GI+RN+V +RT TQVASHAQKYF+R+SN RR+RRS
Sbjct: 96 VPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRS 155
Query: 203 SLFDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQPSLN 244
SLFDM D T P + QV++ S ++S P +N
Sbjct: 156 SLFDMTTD---TVIPMEEDHQVLIQE---NTSQSSSPVPEIN 191
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 62/110 (56%), Positives = 82/110 (74%)
Query: 139 RQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRR 198
R+ GVPWTE EH+ FLIGLQK+GKGDW+GI+RN+V SRTPTQVASHAQKYF+R++N RR
Sbjct: 98 RKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRR 157
Query: 199 KRRSSLFDMVAD---DMATDTPPVPEEQVMLPSPLARESDNTSSQPSLNL 245
+RRSSLFD+ + +MA + P E SPL E++ +S Q ++ +
Sbjct: 158 RRRSSLFDITTETVTEMAMEQDPTQEN-----SPLP-ETNISSGQQAMQV 201
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 276 (102.2 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 57/106 (53%), Positives = 73/106 (68%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ G+PWTEEEHRLFL+GL K GKGDWR I+RN+V+SRTPTQVASHAQKYFIR ++ R
Sbjct: 129 ERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNR 188
Query: 198 RKRRSSLFDM--VADDMATDTPPVPEEQVMLPSPLARESDNTSSQP 241
+RRSS+ D+ V + T + QV+ P A+ QP
Sbjct: 189 DRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRP-AQPQPQPQPQP 233
Score = 41 (19.5 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 80 RDPNHLTDGYLSDDPAHGSGSSNRRCERKKVP 111
+ PN T G S + GS + RK +P
Sbjct: 104 KKPNPGTSGISSSNGGRSGGSRAEQERRKGIP 135
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 54/105 (51%), Positives = 80/105 (76%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ GVPWTEEEH+LFL+GL+K GKGDWR I+RN+V++RTPTQVASHAQKYFIRQ + +
Sbjct: 127 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 186
Query: 198 RKRRSSLFDMVADDMATDTPPVPEEQVMLPSP---LARESDNTSS 239
KRR+S+ D+ +++ + P P+ + SP +A++ +++S
Sbjct: 187 DKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTS 231
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 53/81 (65%), Positives = 66/81 (81%)
Query: 137 NKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNAT 196
++R+ GVPWTEEEHR FL+GL+K GKGDWR IARN+V +RTPTQVASHAQKYFIRQ N
Sbjct: 135 HERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGG 194
Query: 197 RRKRRSSLFDMVADDMATDTP 217
+ KRRSS+ D+ ++ D+P
Sbjct: 195 KDKRRSSIHDITTVNIP-DSP 214
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 48/70 (68%), Positives = 62/70 (88%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ GVPWTEEEH+LFL+GL+K GKGDWR I+RN+V++RTPTQVASHAQKYFIRQ + +
Sbjct: 136 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 195
Query: 198 RKRRSSLFDM 207
KRR+S+ D+
Sbjct: 196 DKRRASIHDI 205
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 54/113 (47%), Positives = 73/113 (64%)
Query: 107 RKKVPCLLARRACAGASLPLA--FTFCLHMDVNKRQIGVPWTEEEHRLFLIGLQKLGKGD 164
R VP + A A A A +F ++R+ G PWTE EH+LFLIGL++ GKGD
Sbjct: 61 RVDVPDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGD 120
Query: 165 WRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVADDMATDTP 217
WR I+RN V++RTPTQVASHAQKYF+RQ++ + ++RSS+ D+ D P
Sbjct: 121 WRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATLAMP 173
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 52/109 (47%), Positives = 77/109 (70%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ G+ WTE+EHRLFL+GL K GKGDWR I+RN+V++RTPTQVASHAQKYFIR ++ +
Sbjct: 113 ERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK 172
Query: 198 RKRRSSLFDMVA---DDMATDTPPVPEEQVMLPSPLARESDNTSSQPSL 243
+RRSS+ D+ + D++T P+ + S ++N +S P++
Sbjct: 173 DRRRSSIHDITSVGNADVSTPQGPITGQN---NSNNNNNNNNNNSSPAV 218
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 56/126 (44%), Positives = 77/126 (61%)
Query: 127 AFTFCLH--MDVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASH 184
A T C M +R+ GVPWTE+EH FL+GL+K GKGDWR IA+++V +RTPTQVASH
Sbjct: 128 AMTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASH 187
Query: 185 AQKYFIRQSNATRRKRRSSLFDMVADDMA-TDTPPVPEEQVMLPSPLARESDNTSSQPSL 243
AQKYF+RQ + KRRSS+ D+ ++ D + SP S + QP+
Sbjct: 188 AQKYFLRQLTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPANSFDVFLQPNP 247
Query: 244 NLSLST 249
+ S ++
Sbjct: 248 HYSFAS 253
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 56/120 (46%), Positives = 74/120 (61%)
Query: 139 RQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRR 198
R+ GVPWTEEEHR FL+GL K GKGDWR I+RN+V+S+TPTQVASHAQKY+ RQ + +
Sbjct: 123 RKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKD 182
Query: 199 KRRSSLFDMVADDM--ATDTPPVPEEQVMLPSPLARESDNTSSQPSL---NLSLSTEFEP 253
KRR S+ D+ ++ A + + +LP + D+T NLS F P
Sbjct: 183 KRRPSIHDITTGNLLNANLNRSFSDHRDILPDLGFIDKDDTEEGVIFMGQNLSSENLFSP 242
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 47/73 (64%), Positives = 59/73 (80%)
Query: 135 DVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSN 194
D ++R+ GVPWTEEEHR FL+GL K GKGDWR I+RN+V S+TPTQVASHAQKY+ RQ +
Sbjct: 124 DQDRRK-GVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLS 182
Query: 195 ATRRKRRSSLFDM 207
+ KRR S+ D+
Sbjct: 183 GAKDKRRPSIHDI 195
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/107 (49%), Positives = 65/107 (60%)
Query: 123 SLPLAFTFCLHMDVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVA 182
SLP A T K++ G+PW+ EEHRLFL GL K GKGDW+ I+R V SR+P QVA
Sbjct: 77 SLPEA-TKSKTQGTGKKK-GIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVA 134
Query: 183 SHAQKYFIRQSNATRRKRRSSLFDMVADDMATDTPPVPEEQVMLPSP 229
SHAQKYF+RQ N ++ +R S+ DM D T PV M P
Sbjct: 135 SHAQKYFLRQKN--KKGKRFSIHDMTLGDAENVTVPVSNLNSMGQQP 179
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 226 (84.6 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 44/81 (54%), Positives = 55/81 (67%)
Query: 137 NKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNAT 196
N ++ G+PW+EEE RLFL GL K GKGDW+ I+R V SRT TQVASHAQKYF RQ +
Sbjct: 85 NGKKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQES 144
Query: 197 RRKRRSSLFDMVADDMATDTP 217
+R S+ DM +A + P
Sbjct: 145 TNTKRPSIHDMTLG-VAVNVP 164
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 229 (85.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 48/115 (41%), Positives = 77/115 (66%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
KR+ GVPW EHR FL GL+K GKGDWR I+R+ V++RT TQVASHAQKYF ++ +
Sbjct: 115 KRRRGVPWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDK 174
Query: 198 RKRRSSLFDM-VADDMATDTP--PVPEEQVMLPSPLAR--ESDNTSSQPSLNLSL 247
+++R S+ D+ +A++ + T P+ +++ A +++ T+ QPSL++ +
Sbjct: 175 KRKRPSIHDITIAENKSISTKQRPITWQKINNNGATASNTQANQTTLQPSLDIPI 229
>TAIR|locus:2075760 [details] [associations]
symbol:AT3G10590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY550300 EMBL:DQ446652 IPI:IPI00540507
RefSeq:NP_187670.1 UniGene:At.50167 ProteinModelPortal:Q9SQY9
SMR:Q9SQY9 PRIDE:Q9SQY9 EnsemblPlants:AT3G10590.1 GeneID:820227
KEGG:ath:AT3G10590 TAIR:At3g10590 InParanoid:Q9SQY9
PhylomeDB:Q9SQY9 ArrayExpress:Q9SQY9 Genevestigator:Q9SQY9
Uniprot:Q9SQY9
Length = 206
Score = 175 (66.7 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
K+ PWTEEEHRLFL GL+K G+G + N+V ++TP QV+SHAQ Y+ RQ + +
Sbjct: 106 KKDTPNPWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNK 164
Query: 198 RKRRSSLFDMVAD 210
+++R S+FD+ +
Sbjct: 165 KEKRRSIFDITLE 177
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 179 (68.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
WT+EEH FL G+Q GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ T+ KR S+
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SI 435
Query: 205 FDMVADDMATD 215
D+ D+ D
Sbjct: 436 HDLSLQDLIDD 446
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 133 (51.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
WT EEH F+ L K G D + I++ YV +R PTQV +HAQKYF+R RK S
Sbjct: 175 WTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERGRKLESK- 232
Query: 205 FDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQPSLNLSLSTEF 251
+ + D + EE SP S S+ P+ N S++ F
Sbjct: 233 -ESINGGADKDDDWLREEYNDEGSPTQYSS--CSNSPTTN-SVANPF 275
Score = 57 (25.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 37/158 (23%), Positives = 62/158 (39%)
Query: 234 SDNTSSQPSLNLSLSTEFEPMEAVCKETEKDSEEPV-IDLNEF--TPMVSSFFPAYMPVP 290
S++ +S P+++ S++ +F K PV + EF TP+ S P++ P
Sbjct: 740 SNSGNSSPNIS-SINGDFVRSP---NYNNKKRPPPVNVSRPEFPVTPLSGS--PSHSPAQ 793
Query: 291 YTYWPH-NAATGEEDKDAGTSGNHXXXXXXXXXXXEPVNVDQLVCMSQLSIGETERGLRE 349
PH N G + G+S + P L S L T +R
Sbjct: 794 S---PHYNLNNGNNNNGNGSSNSSSYSGNQSPLGLVPSPSLSLHPPSPLITSPTSHSIRW 850
Query: 350 PSPLSLKLLGEPSRQSAFHA-N-APVSRSDLSKGKTTP 385
P PL+ L+ + R H N P+ +S + + +P
Sbjct: 851 PGPLNNTLMYDYRRMEPSHGINYVPLQQSPHAPPQQSP 888
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 120 (47.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 34/100 (34%), Positives = 50/100 (50%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
WT+EEH+ F+ L+ G+ WR I +V S+T Q+ SHAQK+F + + SS+
Sbjct: 58 WTDEEHKKFVEALKLYGRA-WRRI-EEHVGSKTAVQIRSHAQKFFSKVAREATGGDGSSV 115
Query: 205 FDMVADDMATDTPPVPEEQVMLPSP--LARESDNTSSQPS 242
+V PP P+ + P P E+D TS S
Sbjct: 116 EPIVIP------PPRPKRKPAHPYPRKFGNEADQTSRSVS 149
Score = 46 (21.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 344 ERGLREPSPLSLKLLGEPSRQSAFHANAPVSRSDLSKGKTTPI 386
E ++EP+ SLKL G+ S ++ ++ S K P+
Sbjct: 221 ESSIKEPTKQSLKLFGKTVLVSDSGMSSSLTTSTYCKSPIQPL 263
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNAT 196
WTEEEH FL LQ + DW+ I ++V S+T Q+ SHAQKYF++ Q N T
Sbjct: 46 WTEEEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNGT 96
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
W+EEEH FL ++ G+G WR I + ++ ++T Q+ SHAQK+F + + + S+
Sbjct: 68 WSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSV 125
Query: 205 FDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQPSLNLS 246
+V PP P+ + P P T S P NLS
Sbjct: 126 KAIVIP------PPRPKRKPAHPYPRKSPVPYTQSPPP-NLS 160
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
W+EEEH FL ++ G+G WR I + ++ ++T Q+ SHAQK+F + + + S+
Sbjct: 79 WSEEEHDRFLEAIKLYGRG-WRQI-QEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSV 136
Query: 205 FDMVADDMATDTPPVPEEQVMLPSPLARESDNTSSQPSLNLS 246
+V PP P+ + P P T S P NLS
Sbjct: 137 KAIVIP------PPRPKRKPAHPYPRKSPVPYTQSPPP-NLS 171
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 116 (45.9 bits), Expect = 0.00027, P = 0.00027
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNATR 197
WTE+EH FL L + DW+ I + +V S+T Q+ SHAQKYF++ Q N T+
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTK 115
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 116 (45.9 bits), Expect = 0.00028, P = 0.00028
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNAT 196
WTE EH FL LQ + DW+ I ++V S+T Q+ SHAQKYF++ Q N T
Sbjct: 51 WTEGEHDKFLEALQLFDR-DWKKI-EDFVGSKTVIQIRSHAQKYFLKVQKNGT 101
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNAT 196
WT+EEH+ FL L + DW+ I ++V S+T Q+ SHAQKYFI+ Q N T
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIKVQKNNT 94
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 389 343 0.00096 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 613 (65 KB)
Total size of DFA: 231 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.56u 0.09s 29.65t Elapsed: 00:00:04
Total cpu time: 29.57u 0.09s 29.66t Elapsed: 00:00:04
Start: Sat May 11 09:52:57 2013 End: Sat May 11 09:53:01 2013