BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016477
(389 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 70/86 (81%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ GVPWTEEEH+LFL+GL+K GKGDWR I+RN+V++RTPTQVASHAQKYFIRQ + +
Sbjct: 127 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 186
Query: 198 RKRRSSLFDMVADDMATDTPPVPEEQ 223
KRR+S+ D+ +++ + P P+ +
Sbjct: 187 DKRRASIHDITTVNLSDNQTPSPDNK 212
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 74/87 (85%), Gaps = 4/87 (4%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATR 197
+R+ GVPWTEEEH+LFL+GLQK+GKGDWRGI+RN+V +RTPTQVASHAQKYF+R+SN R
Sbjct: 90 ERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNR 149
Query: 198 RKRRSSLFDMVADDMATDTPPVPEEQV 224
R+RRSSLFD+ D ++ +P E+V
Sbjct: 150 RRRRSSLFDITTDSVSV----MPIEEV 172
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRSSL 204
WT+EEH FL G+Q GKG W+ IA+ +V +RTPTQ+ SHAQKY++RQ T+ KR S+
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SI 435
Query: 205 FDMVADDMATD 215
D+ D+ D
Sbjct: 436 HDLSLQDLIDD 446
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNATRRKRRS 202
WT EEH F+ L K G D + I++ YV +R PTQV +HAQKYF+R RK S
Sbjct: 175 WTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLRIDRERGRKLES 231
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNATR 197
WTE+EH FL L L DW+ I + +V S+T Q+ SHAQKYF++ Q N T+
Sbjct: 64 WTEQEHDKFLEALH-LFDRDWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTK 115
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 10/66 (15%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR-QSNAT------- 196
WT+EEH+ FL L + DW+ I ++V S+T Q+ SHAQKYFI+ Q N T
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIKVQKNNTGERIPPP 101
Query: 197 RRKRRS 202
R KR+S
Sbjct: 102 RPKRKS 107
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 48.1 bits (113), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 144 PWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF--IRQSNATRRKR 200
PW+ EEH LFL ++K G+G+W+ I+ + SR Q+ +HA+ YF I Q N K+
Sbjct: 231 PWSNEEHELFLKAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKK 288
Score = 32.0 bits (71), Expect = 9.0, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 191
WT+EE RLF + KL D + I + +V ++T QV SHAQK+ ++
Sbjct: 153 WTKEEERLF-VEAYKLYDKDNKKI-QEHVKTKTILQVRSHAQKFALK 197
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 191
WTEEEH F+ L+ G+ W+ I +V ++T Q+ SHAQK+F +
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKI-EEHVATKTAVQIRSHAQKFFSK 71
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIR 191
WTE+EH FL L+ G+ W+ I ++ ++T Q+ SHAQK+F +
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEE-HIGTKTAVQIRSHAQKFFTK 71
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFIRQSNA 195
WT EEH FL +Q+ G D+ IA+ +V +R QV +H Y Q A
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYLKNQKKA 706
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 143 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 189
V WT EE LF GL K G+ W IA + SRT QV S+A++YF
Sbjct: 116 VKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT E +L L +++ G G+W +A + SRTPT+V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 143 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 189
V WT EE LF GL K G+ W I++ + SRT QV S+A++YF
Sbjct: 119 VKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 143 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 189
+ WT EE LF GL K G+ W IA+ + SRT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGRR-WTKIAK-LIGSRTVLQVKSYARQYF 164
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 189
W EEE LF GL + G+ W IA+ + +RT QV S+A++YF
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIAK-LIGTRTVLQVKSYAKQYF 144
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 143 VPWTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYF 189
V WT+EE LF GL G+ W IAR + SR+ QV ++A+ YF
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYF 154
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT E +L L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT E +L L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q15554|TERF2_HUMAN Telomeric repeat-binding factor 2 OS=Homo sapiens GN=TERF2 PE=1
SV=2
Length = 500
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 135 DVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY-VMSRTPTQV 181
++ K+Q WT EE G+QK G+G+W I++NY ++RT +
Sbjct: 443 NITKKQ---KWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMI 487
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT E + L +++ G G+W +A + SRTP +V H +I
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQKY------ 188
KR++ V WT E HR F+ +++LG R + V T VASH QKY
Sbjct: 151 KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKH 210
Query: 189 -FIRQSNATRRKRRSSLF 205
R++ A R+ ++
Sbjct: 211 LLAREAEAANWTRKRHIY 228
>sp|Q4IQK7|RMT2_GIBZE Arginine N-methyltransferase 2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RMT2 PE=3
SV=1
Length = 425
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 127 AFTFCLHMDVNKRQIGVPWTEEEHRLFLIGLQKLGKGDWRGIARNY 172
+T + M + V W EE + + GL+K G+G+W G+ R Y
Sbjct: 373 VYTKVVEMQCADAGLDVEW--EESDVDMSGLEKAGEGEWEGVRRRY 416
>sp|Q3SZP8|TAD2A_BOVIN Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2A PE=2 SV=1
Length = 443
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|O75478|TAD2A_HUMAN Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2A PE=1 SV=3
Length = 443
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q6AYE3|TAD2A_RAT Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2a PE=2
SV=1
Length = 443
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q8CHV6|TAD2A_MOUSE Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2a PE=1 SV=1
Length = 443
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 145 WTEEEHRLFLIGLQKLGKGDWRGIARNYVMSRTPTQVASHAQKYFI 190
WT +E L + G G+W+ +A N + ++T + H K+FI
Sbjct: 75 WTAQEEMALLEAVMDCGFGNWQDVA-NQMCTKTKEECEKHYMKHFI 119
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 138 KRQIGVPWTEEEHRLFLIGLQKLGKGDW---RGIARNYVMSRTPTQVASHAQKYFIRQSN 194
K++ V WT E HR F+ +++LG R + V S T VASH QKY + +
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 195 ATRRKRRSSLFDM 207
R+ ++ +++
Sbjct: 205 LLAREAEAASWNL 217
>sp|Q9CZU3|SK2L2_MOUSE Superkiller viralicidic activity 2-like 2 OS=Mus musculus
GN=Skiv2l2 PE=2 SV=1
Length = 1040
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 234 SDNTSSQPSLNLSLSTEFEPMEAVCKETEKDSEEPVIDLNEFTPMVSSFFPAYMPVPYTY 293
+N+S P L L+ M+ K K S E ++++E T + SSF P M V YT+
Sbjct: 913 QENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTW 971
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,998,189
Number of Sequences: 539616
Number of extensions: 6640853
Number of successful extensions: 13402
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 13345
Number of HSP's gapped (non-prelim): 87
length of query: 389
length of database: 191,569,459
effective HSP length: 119
effective length of query: 270
effective length of database: 127,355,155
effective search space: 34385891850
effective search space used: 34385891850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)