Your job contains 1 sequence.
>016486
MAAAAATYHHLSLSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTH
DRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRV
NRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGS
MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS
VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKE
EARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIR
LGCRGDWPNIKPPGWDPSAGPNASTDTN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016486
(388 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062486 - symbol:SKL2 "shikimate kinase-like 2... 1243 1.4e-126 1
UNIPROTKB|Q5NTH3 - symbol:SK2 "Shikimate kinase 2, chloro... 119 0.00018 1
TAIR|locus:2052586 - symbol:SK1 "shikimate kinase 1" spec... 117 0.00029 1
>TAIR|locus:2062486 [details] [associations]
symbol:SKL2 "shikimate kinase-like 2" species:3702
"Arabidopsis thaliana" [GO:0004765 "shikimate kinase activity"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=RCA;TAS]
[GO:0000096 "sulfur amino acid metabolic process" evidence=RCA]
[GO:0006546 "glycine catabolic process" evidence=RCA] [GO:0006636
"unsaturated fatty acid biosynthetic process" evidence=RCA]
[GO:0006733 "oxidoreduction coenzyme metabolic process"
evidence=RCA] [GO:0006766 "vitamin metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009069 "serine family amino acid metabolic
process" evidence=RCA] [GO:0009072 "aromatic amino acid family
metabolic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0019748 "secondary
metabolic process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0042545 "cell wall modification" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016301
InterPro:IPR008978 SUPFAM:SSF49764 PROSITE:PS01128 EMBL:AC005314
InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 EMBL:AF412061
EMBL:AY074560 IPI:IPI00539122 PIR:D84769 RefSeq:NP_565805.1
UniGene:At.13015 ProteinModelPortal:O82290 SMR:O82290 IntAct:O82290
STRING:O82290 PaxDb:O82290 PRIDE:O82290 EnsemblPlants:AT2G35500.1
GeneID:818115 KEGG:ath:AT2G35500 TAIR:At2g35500 eggNOG:NOG296162
HOGENOM:HOG000005904 InParanoid:O82290 OMA:LGCRGDW PhylomeDB:O82290
ProtClustDB:CLSN2688705 Genevestigator:O82290 Uniprot:O82290
Length = 387
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 252/381 (66%), Positives = 297/381 (77%)
Query: 5 AATYHHLSLSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDR-R 63
A ++ SL+ ++ S + SSPR S F + S NV+P DR
Sbjct: 9 AIIFNSPSLNPVTTQATFLSSNRIRSSPR-VFSGFHSLRRRGFRRFSQNVIP----DRFN 63
Query: 64 RFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRS 123
F+C N LS++ +T YEF+DG E+ELRL+L + EI S KDI VDADGT L V+ R+
Sbjct: 64 SFSC-NCLSAVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRN 122
Query: 124 GSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQL 183
G ITL+ETN LF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDIVESWESLTAG MQL
Sbjct: 123 GLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQL 182
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTIDSW+LAEG DSV
Sbjct: 183 LKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEGPDSVAE 242
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E VLESLSSHVR VV+TLGG+ GAA RAD+W+HLY+GFTVW+SQTEA DE SAKEEAR
Sbjct: 243 AESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEESAKEEAR 302
Query: 304 RHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGC 363
R ++ ++GYSNADVVVKLQGWD HAKSVAQASLSALKQLI SDK LPGKKSLYIRLGC
Sbjct: 303 RSKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSLYIRLGC 362
Query: 364 RGDWPNIKPPGWDPSA--GPN 382
RGDWPNIKPPGWDPS+ GP+
Sbjct: 363 RGDWPNIKPPGWDPSSDTGPH 383
>UNIPROTKB|Q5NTH3 [details] [associations]
symbol:SK2 "Shikimate kinase 2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008212 GO:GO:0004765
GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
GO:GO:0019632 KO:K00891 BRENDA:2.7.1.71 EMBL:AB188835 EMBL:AP003513
RefSeq:NP_001057199.2 UniGene:Os.56273 ProteinModelPortal:Q5NTH3
STRING:Q5NTH3 EnsemblPlants:LOC_Os06g12150.1 GeneID:4340547
KEGG:osa:4340547 Gramene:Q5NTH3 OMA:HENSHNS ProtClustDB:CLSN2696071
Uniprot:Q5NTH3
Length = 307
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 38/105 (36%), Positives = 52/105 (49%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG VA LA LGY+ + +L+E + + E S++
Sbjct: 92 LNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFR 151
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT GG GA R W+++ G +VWL
Sbjct: 152 DNESSVLRDLSSMRRLVVAT-GG--GAVIRPVNWKYMKKGLSVWL 193
>TAIR|locus:2052586 [details] [associations]
symbol:SK1 "shikimate kinase 1" species:3702 "Arabidopsis
thaliana" [GO:0004765 "shikimate kinase activity" evidence=IEA;IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;TAS] [GO:0019632 "shikimate metabolic process"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] HAMAP:MF_00109 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009507 EMBL:CP002685 GO:GO:0046872
GO:GO:0004765 GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100
PROSITE:PS01128 InterPro:IPR023000 GO:GO:0019632 KO:K00891
OMA:YTMAFSK UniGene:At.47529 UniGene:At.50089 IPI:IPI00529386
RefSeq:NP_001077937.1 ProteinModelPortal:F4IIJ2 SMR:F4IIJ2
PRIDE:F4IIJ2 EnsemblPlants:AT2G21940.4 GeneID:816730
KEGG:ath:AT2G21940 Uniprot:F4IIJ2
Length = 304
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 101 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 160
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG GA R W++++ G ++WL
Sbjct: 161 GKETDALKKLSSRYQVVVST-GG--GAVIRPINWKYMHKGISIWL 202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 388 388 0.00093 117 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 623 (66 KB)
Total size of DFA: 258 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.57u 0.14s 33.71t Elapsed: 00:00:02
Total cpu time: 33.57u 0.14s 33.71t Elapsed: 00:00:02
Start: Sat May 11 10:21:10 2013 End: Sat May 11 10:21:12 2013