BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016486
(388 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071393|ref|XP_002303438.1| shikimate kinase-like protein [Populus trichocarpa]
gi|222840870|gb|EEE78417.1| shikimate kinase-like protein [Populus trichocarpa]
Length = 384
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/365 (73%), Positives = 304/365 (83%), Gaps = 13/365 (3%)
Query: 15 SISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVV-PIKTHDRRRFTCSNSLSS 73
S+S P S S+T S S+SI KS N P+ + RF+C N +S+
Sbjct: 25 SLSNIPFSISKTNFTSVANFSLSI--------PASKSNNASSPLNRY--SRFSC-NCIST 73
Query: 74 IPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETN 133
NT+ YEFSD S+E+ELRL L L+IQSS+DIFVDADGT L V+V SGS ITLIETN
Sbjct: 74 ATPNTN-YEFSDSSSEVELRLSLVGLDIQSSRDIFVDADGTSLVVQVQHSGSHITLIETN 132
Query: 134 QLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVG 193
++F+KIKP ETIW+ID+DQLVIN+KKQDP+LKWPDIVESWESLTAGSMQLLKG SIFLVG
Sbjct: 133 KMFEKIKPAETIWFIDDDQLVINMKKQDPDLKWPDIVESWESLTAGSMQLLKGASIFLVG 192
Query: 194 DSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLS 253
DSTE+N+KVA ELAVGLGYT L T+ELLETFAKQTIDSW+LAEGSDSV EC +LESLS
Sbjct: 193 DSTEINQKVARELAVGLGYTLLDTQELLETFAKQTIDSWVLAEGSDSVAEAECAILESLS 252
Query: 254 SHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGY 313
SHVRAVV+TLGG+QGAA +A KWQHLYAGFTVWLSQTEA+DE+SAKEEAR++VKD + Y
Sbjct: 253 SHVRAVVSTLGGKQGAAGKAYKWQHLYAGFTVWLSQTEALDEDSAKEEARKNVKDRSVAY 312
Query: 314 SNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPP 373
SNADVVVKLQGWD+DHAKSVAQASLSALKQLI SDKKLPGKKSLYIRLGCRGDWPNIKPP
Sbjct: 313 SNADVVVKLQGWDSDHAKSVAQASLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKPP 372
Query: 374 GWDPS 378
GWDPS
Sbjct: 373 GWDPS 377
>gi|225427143|ref|XP_002277265.1| PREDICTED: uncharacterized protein LOC100266016 [Vitis vinifera]
gi|297742063|emb|CBI33850.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 261/381 (68%), Positives = 308/381 (80%), Gaps = 19/381 (4%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIFKPI-FISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H SSP+ ++++F P FIS+ + RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSSPKPTLTLFTPPPFISN-------------NATRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISVNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N+L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINKLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDSW+ A+GS+SV E
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDSWVTADGSESVAEAES 229
Query: 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHV 306
VLE+LSSHVRAV+ATLGG GAA RADKW+HLYAGFTVWLSQ+E++DE SAKEEARRH+
Sbjct: 230 AVLENLSSHVRAVIATLGGLHGAARRADKWRHLYAGFTVWLSQSESIDEESAKEEARRHI 289
Query: 307 KDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGD 366
++G LGYSNADVVVKL GWDADHAK+VAQASLSALKQLI SDKKLPGKKSLYIRLGCRGD
Sbjct: 290 QEGSLGYSNADVVVKLHGWDADHAKTVAQASLSALKQLIMSDKKLPGKKSLYIRLGCRGD 349
Query: 367 WPNIKPPGWDPSAGPNASTDT 387
WP+IKPPGWDPS G T
Sbjct: 350 WPDIKPPGWDPSTGAEVPAGT 370
>gi|255555887|ref|XP_002518979.1| ATP binding protein, putative [Ricinus communis]
gi|223541966|gb|EEF43512.1| ATP binding protein, putative [Ricinus communis]
Length = 382
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/354 (72%), Positives = 296/354 (83%), Gaps = 11/354 (3%)
Query: 38 IFKPIFISSSLH-------KSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEI 90
I KP+F S S KS NV K ++R +C ++ ++ ++ YEFSDGS+E+
Sbjct: 32 ISKPVFTSISKFCLPISSFKSYNVSASKEYNRLSCSCFSTATT----STNYEFSDGSSEV 87
Query: 91 ELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDE 150
ELRL LGS + +S KDIFVDADGT L VRV RSGSF TLI+TN LFDKIKP ETIWYID+
Sbjct: 88 ELRLPLGSQDYESGKDIFVDADGTSLIVRVKRSGSFTTLIQTNYLFDKIKPAETIWYIDD 147
Query: 151 DQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGL 210
DQLVINLKKQDPELKWPDIVESWESLTAG+MQLLKGTSI++VGDSTE+N+KVA ELA GL
Sbjct: 148 DQLVINLKKQDPELKWPDIVESWESLTAGAMQLLKGTSIYIVGDSTEINQKVARELAGGL 207
Query: 211 GYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAA 270
GYTPL T+ELLET+ KQTIDSW+LAEGSDSV E +LESLSSHVRAV++TLG ++GAA
Sbjct: 208 GYTPLDTQELLETYTKQTIDSWVLAEGSDSVAEAESAILESLSSHVRAVISTLGRKKGAA 267
Query: 271 ARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHA 330
R+D+W+HLYAGFTVWLSQTEA DE SAKEEARRHV+DG L YS ADVVVK+QGW+ DHA
Sbjct: 268 GRSDRWRHLYAGFTVWLSQTEATDEGSAKEEARRHVQDGSLAYSKADVVVKVQGWNDDHA 327
Query: 331 KSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSAGPNAS 384
KSVAQASLSALKQLI DKKLPGKKSLYIRLGCRGDWPNIKPPGW+PSA +A+
Sbjct: 328 KSVAQASLSALKQLILPDKKLPGKKSLYIRLGCRGDWPNIKPPGWNPSAEGDAT 381
>gi|449465896|ref|XP_004150663.1| PREDICTED: uncharacterized protein LOC101203272 [Cucumis sativus]
gi|449517683|ref|XP_004165874.1| PREDICTED: uncharacterized LOC101203272 [Cucumis sativus]
Length = 384
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/336 (73%), Positives = 285/336 (84%)
Query: 44 ISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQS 103
IS++L ++ P T RFT + S S+ P T YEF+D S+E+ELRLQLG+ +I+S
Sbjct: 40 ISTALTSCFSLSPSNTRFSSRFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRS 99
Query: 104 SKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPE 163
SKD++VDA+ T LT+RV R GS ITL+ET QLF+KIKP ETIWYIDEDQLVINLKK DP+
Sbjct: 100 SKDVYVDANDTSLTIRVQRPGSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPD 159
Query: 164 LKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET 223
LKWPDIVESWESLTAG QLLKGTSIFL+GDST++N+KVA ELAVGLGYTPLSTKELLET
Sbjct: 160 LKWPDIVESWESLTAGFAQLLKGTSIFLIGDSTDINQKVAHELAVGLGYTPLSTKELLET 219
Query: 224 FAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGF 283
+KQTIDSWMLAEGSD+V E V+ESLSSHVRAVVATLGG+ GAA R D W+HLYAGF
Sbjct: 220 LSKQTIDSWMLAEGSDAVAQVENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGF 279
Query: 284 TVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQ 343
TVWLSQTEA DE++AKEEA+RH++D +L YSNA+VVVKLQGWD H+K VAQA+LSALKQ
Sbjct: 280 TVWLSQTEATDESAAKEEAKRHMQDSQLAYSNAEVVVKLQGWDDAHSKVVAQAALSALKQ 339
Query: 344 LIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 379
LI SDK LP KKSLYIRLGCRGDWPNIKPPGWDP++
Sbjct: 340 LILSDKSLPDKKSLYIRLGCRGDWPNIKPPGWDPAS 375
>gi|356497645|ref|XP_003517670.1| PREDICTED: uncharacterized protein LOC100816906 [Glycine max]
Length = 369
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 248/375 (66%), Positives = 296/375 (78%), Gaps = 15/375 (4%)
Query: 13 LSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLS 72
L +S NP +++ + S+ KP +S + +P K + R R C S S
Sbjct: 8 LCYLSTNPTTRN---------LNFSVLKPNVLS----LRSFSLPQKHYLRLR-PCKCS-S 52
Query: 73 SIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIET 132
+ P +T+ YEFSDGS+E+ELRL +G L+++SS+DI VD + T L +RV R GS ITLIET
Sbjct: 53 TAPVSTTTYEFSDGSSEVELRLNIGGLDVRSSRDILVDTNDTSLAIRVLRPGSPITLIET 112
Query: 133 NQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLV 192
N LFD++K +ETIWYID+DQLV+N KKQDP+LKWPDI+ESWESLTAGS QLL+GTSI+LV
Sbjct: 113 NPLFDRVKSSETIWYIDDDQLVVNFKKQDPDLKWPDIMESWESLTAGSPQLLQGTSIYLV 172
Query: 193 GDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
GDSTE+N+KVA ELA GLGYTPLSTKELLE + KQT+DSW+LAEGSDSV E VLES+
Sbjct: 173 GDSTEINQKVAQELATGLGYTPLSTKELLELYTKQTVDSWLLAEGSDSVAEAESAVLESI 232
Query: 253 SSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLG 312
SSH RAVVATLGGQ AA RA KWQHLYAGFTVWLS+TEA+DE+SA+ E ++VKDG +
Sbjct: 233 SSHARAVVATLGGQHSAAGRAGKWQHLYAGFTVWLSKTEALDEDSARLETHKNVKDGIIS 292
Query: 313 YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP 372
Y+NADVVVKLQGWD +AKSVAQA LSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP
Sbjct: 293 YTNADVVVKLQGWDPAYAKSVAQACLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP 352
Query: 373 PGWDPSAGPNASTDT 387
PGWDPS+ N + T
Sbjct: 353 PGWDPSSEGNTTLGT 367
>gi|357485087|ref|XP_003612831.1| Shikimate kinase-like protein [Medicago truncatula]
gi|355514166|gb|AES95789.1| Shikimate kinase-like protein [Medicago truncatula]
Length = 377
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/367 (65%), Positives = 288/367 (78%), Gaps = 9/367 (2%)
Query: 13 LSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLS 72
L + NP ++ FS I KP F +SL ++ + +
Sbjct: 11 LRFLPPNPTTRKTFNFFS-------ILKPNF--NSLRSFSHSSLFSLSHKYPLSPCKCSF 61
Query: 73 SIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIET 132
+ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS ITLI+T
Sbjct: 62 TAPVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDT 121
Query: 133 NQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLV 192
N LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKGTSI+LV
Sbjct: 122 NPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLV 181
Query: 193 GDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE VLES+
Sbjct: 182 GDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEGTVLESI 241
Query: 253 SSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLG 312
SSHVRA VATLGG+ GAA R+DKW+HLYAGFTVWLSQTEA DE+SA+EE R+VKD
Sbjct: 242 SSHVRAAVATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITA 301
Query: 313 YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP 372
Y+NADVVVKLQGWD +AKSVAQ LSALKQLI SDKKLPGKKSLYIRLGCRGDWPNIKP
Sbjct: 302 YTNADVVVKLQGWDPAYAKSVAQGCLSALKQLILSDKKLPGKKSLYIRLGCRGDWPNIKP 361
Query: 373 PGWDPSA 379
PGWDPS+
Sbjct: 362 PGWDPSS 368
>gi|388504258|gb|AFK40195.1| unknown [Medicago truncatula]
Length = 377
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/367 (65%), Positives = 286/367 (77%), Gaps = 9/367 (2%)
Query: 13 LSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLS 72
L + NP ++ FS I KP F +SL ++ + +
Sbjct: 11 LRFLPPNPTTRKTFNFFS-------ILKPNF--NSLRSFSHSSLFSLSHKYPLSPCKCSF 61
Query: 73 SIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIET 132
+ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS ITLI+T
Sbjct: 62 TAPVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDT 121
Query: 133 NQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLV 192
N LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKGTSI+L
Sbjct: 122 NPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLA 181
Query: 193 GDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESL 252
GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAEGSDSV GE VLES+
Sbjct: 182 GDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAEGSDSVAEGEGTVLESI 241
Query: 253 SSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLG 312
SSHVRA VATLGG+ GAA R+DKW+HLYAGFTVWLSQTEA DE+SA+EE R+VKD
Sbjct: 242 SSHVRAAVATLGGKHGAAGRSDKWRHLYAGFTVWLSQTEASDEDSAREETHRNVKDRITA 301
Query: 313 YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP 372
Y+NADVVVKLQGWD +AKSVAQ LS LKQLI SDKKLPGKKSLYIRLGCRGDWPNIKP
Sbjct: 302 YTNADVVVKLQGWDPAYAKSVAQGCLSTLKQLILSDKKLPGKKSLYIRLGCRGDWPNIKP 361
Query: 373 PGWDPSA 379
PGWDPS+
Sbjct: 362 PGWDPSS 368
>gi|388490874|gb|AFK33503.1| unknown [Lotus japonicus]
Length = 376
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/313 (73%), Positives = 270/313 (86%), Gaps = 1/313 (0%)
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C S ++ P T+ YEFSDGS+E+ELRL +G L+IQS++DI VDAD + L ++V RSGS
Sbjct: 56 CKCSYTA-PVPTTTYEFSDGSSEMELRLNIGGLDIQSTRDISVDADDSSLAIKVLRSGSP 114
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
+TLIETN LFD+IKP+ETIWYIDEDQLV+N KKQDP+LKWPDI+ESWESL AGS QLL+G
Sbjct: 115 LTLIETNPLFDRIKPSETIWYIDEDQLVVNFKKQDPDLKWPDIMESWESLAAGSTQLLQG 174
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGEC 246
TSI+LVGDSTE+N+KVA ELA+GLGYTPL+TKELLE + KQT+DSW+LAEG DSV E
Sbjct: 175 TSIYLVGDSTEINQKVAQELAIGLGYTPLNTKELLEAYTKQTVDSWLLAEGPDSVAEAES 234
Query: 247 DVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHV 306
VLES+SS+ RAVVATLGG+QGA+ R+DKWQHL+AGFTVWLSQTEA DE+SA+EEA + V
Sbjct: 235 SVLESMSSYARAVVATLGGKQGASRRSDKWQHLHAGFTVWLSQTEATDEDSAREEAHKSV 294
Query: 307 KDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGD 366
KD + Y+NADVVVK QGWD + KSVAQA L ALKQLI SDKKLPGKKSLYIRLGCRGD
Sbjct: 295 KDSTIAYTNADVVVKFQGWDPAYVKSVAQACLRALKQLILSDKKLPGKKSLYIRLGCRGD 354
Query: 367 WPNIKPPGWDPSA 379
WPNI+PPGWDPS+
Sbjct: 355 WPNIEPPGWDPSS 367
>gi|18403860|ref|NP_565805.1| shikimate kinase like 2 [Arabidopsis thaliana]
gi|75100603|sp|O82290.2|SKL2_ARATH RecName: Full=Probable inactive shikimate kinase like 2,
chloroplastic; Short=AtSKL2; Flags: Precursor
gi|15724242|gb|AAL06514.1|AF412061_1 At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|18377827|gb|AAL67100.1| At2g35500/T32F12.12 [Arabidopsis thaliana]
gi|20197350|gb|AAC36171.2| expressed protein [Arabidopsis thaliana]
gi|330254020|gb|AEC09114.1| shikimate kinase like 2 [Arabidopsis thaliana]
Length = 387
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 254/387 (65%), Positives = 301/387 (77%), Gaps = 12/387 (3%)
Query: 3 AAAATYHHLSLSSISQNPISKSET-----QHFSSPRHSVSIFKPIFISSSLHKSTNVVPI 57
AA A+ + +S S NP++ T + SSPR S F + S NV+P
Sbjct: 2 AAFASGLAIIFNSPSLNPVTTQATFLSSNRIRSSPR-VFSGFHSLRRRGFRRFSQNVIPD 60
Query: 58 KTHDRRRFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLT 117
+ + F+C N LS++ +T YEF+DG E+ELRL+L + EI S KDI VDADGT L
Sbjct: 61 RFNS---FSC-NCLSAVSTSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLA 116
Query: 118 VRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLT 177
V+ R+G ITL+ETN LF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDIVESWESLT
Sbjct: 117 VKEKRNGLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLT 176
Query: 178 AGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEG 237
AG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTIDSW+LAEG
Sbjct: 177 AGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTIDSWILAEG 236
Query: 238 SDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENS 297
DSV E VLESLSSHVR VV+TLGG+ GAA RAD+W+HLY+GFTVW+SQTEA DE S
Sbjct: 237 PDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATDEES 296
Query: 298 AKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSL 357
AKEEARR ++ ++GYSNADVVVKLQGWD HAKSVAQASLSALKQLI SDK LPGKKSL
Sbjct: 297 AKEEARRSKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGKKSL 356
Query: 358 YIRLGCRGDWPNIKPPGWDPSA--GPN 382
YIRLGCRGDWPNIKPPGWDPS+ GP+
Sbjct: 357 YIRLGCRGDWPNIKPPGWDPSSDTGPH 383
>gi|297823343|ref|XP_002879554.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
gi|297325393|gb|EFH55813.1| hypothetical protein ARALYDRAFT_482510 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/394 (63%), Positives = 295/394 (74%), Gaps = 22/394 (5%)
Query: 1 MAAAAATYHHLSLSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTH 60
MAA A+ S S NP++ T +F PI I SS + ++
Sbjct: 1 MAAFASGLASTIFYSPSLNPLTCQAT-----------LFSPIRIRSSPRVFRGLHSLRRR 49
Query: 61 DRRRFT-----------CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFV 109
RRF+ N LS++ +T YEF+DG E+ELRL+L + E S KDI V
Sbjct: 50 GFRRFSQNVTTDRFKSFSCNCLSAVSTSTIDYEFTDGGKEVELRLRLKTGETLSPKDISV 109
Query: 110 DADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDI 169
DADGT L V+ R+G ITL+ETNQLF+KI P+ETIWYIDEDQLV+N+KK D ELKWPDI
Sbjct: 110 DADGTSLAVKEKRNGLLITLLETNQLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDI 169
Query: 170 VESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTI 229
VESWESLTAG MQLLKG SI++VGDSTE+N+KV+ ELAVGLGY+PL +KELLE+F+KQTI
Sbjct: 170 VESWESLTAGMMQLLKGASIYIVGDSTEINQKVSRELAVGLGYSPLDSKELLESFSKQTI 229
Query: 230 DSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQ 289
DSW++AEG DSV E VLESLSSHVR VV+TLGG+ GAA RAD+W+HLY+GFTVW+SQ
Sbjct: 230 DSWIVAEGPDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQ 289
Query: 290 TEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDK 349
TEA DE SAKEEARR+ ++ ++GYSNADVVVKLQGWD HAKSVAQASLSALKQLI SDK
Sbjct: 290 TEATDEESAKEEARRNKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDK 349
Query: 350 KLPGKKSLYIRLGCRGDWPNIKPPGWDPSAGPNA 383
LPGKKSLYIRLGCRGDWPNIKPPGWDPS+ A
Sbjct: 350 GLPGKKSLYIRLGCRGDWPNIKPPGWDPSSDTGA 383
>gi|115483646|ref|NP_001065493.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|78709051|gb|ABB48026.1| expressed protein [Oryza sativa Japonica Group]
gi|113640025|dbj|BAF27330.1| Os10g0577700 [Oryza sativa Japonica Group]
gi|215692645|dbj|BAG88065.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712379|dbj|BAG94506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185074|gb|EEC67501.1| hypothetical protein OsI_34782 [Oryza sativa Indica Group]
Length = 375
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 240/308 (77%)
Query: 70 SLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITL 129
S+SS A YEF+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TL
Sbjct: 59 SVSSSTAPAKDYEFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTL 118
Query: 130 IETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSI 189
I QLFD+IK +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+
Sbjct: 119 INVKQLFDRIKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISV 178
Query: 190 FLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVL 249
+VGDST++NE VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VL
Sbjct: 179 HIVGDSTDINEAVAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVL 238
Query: 250 ESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDG 309
ESLSSHVR VVATLGG+QGAA+R DKWQ+L+AGFTVWLS ++A DE SAKEEARR V G
Sbjct: 239 ESLSSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWLSVSDASDEASAKEEARRSVSSG 298
Query: 310 KLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPN 369
+ Y+ ADVVVKL GWD ++ ++VAQ L ALKQL +DKKL GKKSLY+RLGCRGDWPN
Sbjct: 299 NVAYAKADVVVKLGGWDPEYTRAVAQGCLVALKQLTLADKKLAGKKSLYMRLGCRGDWPN 358
Query: 370 IKPPGWDP 377
I+PPGWDP
Sbjct: 359 IEPPGWDP 366
>gi|357141190|ref|XP_003572125.1| PREDICTED: uncharacterized protein LOC100823385 [Brachypodium
distachyon]
Length = 372
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/361 (56%), Positives = 255/361 (70%), Gaps = 14/361 (3%)
Query: 26 TQHFSSP----RHSVS----IFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPAN 77
T FS P RHS + +P + S L S R R S+S+ PA
Sbjct: 8 TCSFSLPANPGRHSTRAPRLLLRPAYRRSLLAASP-----PPASRLRLRPRTSVSASPAA 62
Query: 78 TSQ-YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLF 136
+ YEF+DG+ E+ELRL +G L I+SS+D+FVD D L +R G+ TL+ LF
Sbjct: 63 AERDYEFTDGNGEVELRLDIGKLGIESSRDVFVDVDDMSLLIRAKSDGTLRTLMNVTTLF 122
Query: 137 DKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDST 196
D++K +ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST
Sbjct: 123 DRVKSSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDST 182
Query: 197 EVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHV 256
++NE VA E+A G+GY P+ T ELLE+ +++ID+W EG DSV EC VLESLSSHV
Sbjct: 183 DINEAVAKEIAEGIGYLPVCTSELLESATQKSIDAWADTEGVDSVAEAECVVLESLSSHV 242
Query: 257 RAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNA 316
R VVATLGG+QGAA+R DKWQ+L++GFTVWLS ++A DE +AKEEARR V G + Y+ +
Sbjct: 243 RTVVATLGGKQGAASRFDKWQYLHSGFTVWLSVSDAGDEAAAKEEARRSVSAGSVAYAKS 302
Query: 317 DVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWD 376
DVVVKL GWD + ++VAQ L ALKQL +DKKL GKKSLYIRLGCRGDWPNI+PPGWD
Sbjct: 303 DVVVKLGGWDPVYTRAVAQGCLVALKQLTLADKKLAGKKSLYIRLGCRGDWPNIEPPGWD 362
Query: 377 P 377
P
Sbjct: 363 P 363
>gi|194688246|gb|ACF78207.1| unknown [Zea mays]
gi|414867928|tpg|DAA46485.1| TPA: ATP binding protein [Zea mays]
Length = 384
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 252/350 (72%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQ 267
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESLSSHVR VVATLGG+Q
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESLSSHVRTVVATLGGKQ 265
Query: 268 GAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDA 327
GAA+R DKWQ+L++GFTVWLS ++A DE SA+EEARR V G + Y+ ADVVVKL GWD
Sbjct: 266 GAASRFDKWQYLHSGFTVWLSVSDASDEASAREEARRSVSSGSVSYAKADVVVKLGGWDP 325
Query: 328 DHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDP 377
++ ++VAQ L ALKQL +DKKL GKKSLYIRLGCRGDWPNI+PPGWDP
Sbjct: 326 EYTRAVAQGCLVALKQLTLADKKLAGKKSLYIRLGCRGDWPNIEPPGWDP 375
>gi|212276119|ref|NP_001130083.1| uncharacterized protein LOC100191176 [Zea mays]
gi|195628578|gb|ACG36119.1| ATP binding protein [Zea mays]
Length = 384
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 252/350 (72%)
Query: 28 HFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLSSIPANTSQYEFSDGS 87
H SP +S P ++ + ++ + R S+S+ PA + YEF+DG+
Sbjct: 26 HRRSPSGILSSHLPRLPATQFRRLRSLSAAASPPASRLRPRASVSTSPAPSKDYEFTDGN 85
Query: 88 AEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKPTETIWY 147
E+ELRL + L I SSKD+FVD D T L +R G+ TL+ LFD+IK +ETIW+
Sbjct: 86 GEVELRLDIQKLGIASSKDVFVDVDDTFLLIRAKSDGTLRTLMNVQTLFDRIKSSETIWF 145
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
IDEDQLV+NLKK + ELKWPD+ ESWESLT+G QLL G S+ +VGDST +NE VA E+A
Sbjct: 146 IDEDQLVVNLKKVEQELKWPDVDESWESLTSGITQLLTGISVHIVGDSTHINEAVAKEIA 205
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQ 267
G+GY P+ T ELLE+ +++ID+W+ +EG DSV E VLESLSSHVR VVATLGG+Q
Sbjct: 206 EGIGYLPVCTSELLESATEKSIDTWVASEGVDSVAEAESVVLESLSSHVRTVVATLGGKQ 265
Query: 268 GAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDA 327
GAA+R DKWQ+L++GFTVWLS ++A DE SA+EEARR V G + Y+ ADVVVKL GWD
Sbjct: 266 GAASRFDKWQYLHSGFTVWLSVSDASDEASAREEARRSVSSGSVSYAKADVVVKLGGWDP 325
Query: 328 DHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDP 377
++ ++VAQ L ALKQL +DKKL GKKSLYIRLGCRGDWPNI+PPGWDP
Sbjct: 326 EYTRAVAQGCLVALKQLTLADKKLAGKKSLYIRLGCRGDWPNIEPPGWDP 375
>gi|18057165|gb|AAL58188.1|AC027037_10 unknown protein [Oryza sativa Japonica Group]
Length = 336
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/326 (58%), Positives = 235/326 (72%), Gaps = 28/326 (8%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLS-------- 253
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESLS
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESLSRLLLWATP 183
Query: 254 --------------------SHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
SHVR VVATLGG+QGAA+R DKWQ+L+AGFTVWLS ++A
Sbjct: 184 SLLPLVDVLLSMLKRLFLPRSHVRTVVATLGGKQGAASRFDKWQYLHAGFTVWLSVSDAS 243
Query: 294 DENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPG 353
DE SAKEEARR V G + Y+ ADVVVKL GWD ++ ++VAQ L ALKQL +DKKL G
Sbjct: 244 DEASAKEEARRSVSSGNVAYAKADVVVKLGGWDPEYTRAVAQGCLVALKQLTLADKKLAG 303
Query: 354 KKSLYIRLGCRGDWPNIKPPGWDPSA 379
KKSLY+RLGCRGDWPNI+PPGWDP +
Sbjct: 304 KKSLYMRLGCRGDWPNIEPPGWDPDS 329
>gi|242040065|ref|XP_002467427.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
gi|241921281|gb|EER94425.1| hypothetical protein SORBIDRAFT_01g027930 [Sorghum bicolor]
Length = 387
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/299 (61%), Positives = 235/299 (78%)
Query: 81 YEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
YEF+DG+ E+ELRL + L I+S++D+FVD D T L +R G+ TL+ LFD+IK
Sbjct: 82 YEFTDGNGEVELRLDIQKLGIESARDVFVDVDDTSLLIRAKSDGTLRTLMNVQTLFDRIK 141
Query: 141 PTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNE 200
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST +NE
Sbjct: 142 SSETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTHINE 201
Query: 201 KVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260
VA E+A G+GY P+ T ELLE+ +++ID+W+ +EG+DSV E VLESLSSHVR VV
Sbjct: 202 AVAKEIAEGIGYLPVCTSELLESATQKSIDTWVASEGADSVAEAESVVLESLSSHVRTVV 261
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVV 320
ATLGG+QGAA+R D+WQ+L++GFTVWLS ++A DE +A+EEARR V G + Y+ ADVVV
Sbjct: 262 ATLGGKQGAASRFDRWQYLHSGFTVWLSVSDASDEATAREEARRSVSSGSVSYAKADVVV 321
Query: 321 KLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSA 379
KL GWD ++ ++VAQ L ALKQL +DKKL GKKSLYIRLGCRGDWPNI+PPGWDP +
Sbjct: 322 KLGGWDPEYTRAVAQGCLVALKQLTLADKKLAGKKSLYIRLGCRGDWPNIEPPGWDPES 380
>gi|222613330|gb|EEE51462.1| hypothetical protein OsJ_32585 [Oryza sativa Japonica Group]
Length = 275
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 164/276 (59%), Positives = 206/276 (74%), Gaps = 9/276 (3%)
Query: 82 EFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIKP 141
+F+DG E+ELRL +G L I++S+D+FVD D T L VR G+ TLI QLFD+IK
Sbjct: 4 KFTDGGGEVELRLDIGKLGIENSRDVFVDVDDTSLLVRAKSDGTLRTLINVKQLFDRIKS 63
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
+ETIW+IDEDQLV+NLKK + ELKWPDI ESWESLT+G QLL G S+ +VGDST++NE
Sbjct: 64 SETIWFIDEDQLVVNLKKVEQELKWPDIDESWESLTSGITQLLTGISVHIVGDSTDINEA 123
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVA 261
VA E+A G+GY P+ T ELLE+ +++ID W+ +EG DSV EC VLESLSSHVR VVA
Sbjct: 124 VAKEIAEGIGYLPVCTSELLESATEKSIDKWLASEGVDSVAEAECVVLESLSSHVRTVVA 183
Query: 262 TLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVK 321
TLGG+QGAA+R DKWQ+L+AGFT+ L SAKEEARR V G + Y+ ADVVVK
Sbjct: 184 TLGGKQGAASRFDKWQYLHAGFTMKL---------SAKEEARRSVSSGNVAYAKADVVVK 234
Query: 322 LQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSL 357
L GWD ++ ++VAQ L ALKQL +DKKL G+ S+
Sbjct: 235 LGGWDPEYTRAVAQGCLVALKQLTLADKKLAGEVSI 270
>gi|302814728|ref|XP_002989047.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
gi|300143148|gb|EFJ09841.1| hypothetical protein SELMODRAFT_129117 [Selaginella moellendorffii]
Length = 304
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/304 (49%), Positives = 205/304 (67%), Gaps = 7/304 (2%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDLSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSH 255
T +N VA ELA+ LGY PL +K+L+E K ++D + EG D+V EC V E+LS
Sbjct: 122 TLINSAVAKELALALGYVPLESKKLMEQLLKTSLDDYAKLEGPDAVAELECKVFETLSKQ 181
Query: 256 VRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSN 315
+R VVATLGG QGAA++ W+ +YAGFTVWLS++++ DE A++EA + K+G + YS
Sbjct: 182 LRVVVATLGGDQGAASKPHSWRFMYAGFTVWLSRSQSQDEAGAEKEAVK-AKEGSVVYSK 240
Query: 316 ADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGW 375
A+ VV L GW+ A+ A+ L ALK LI+SDK+LPG KSLY+RLG RGDWPNI PPGW
Sbjct: 241 AETVVALSGWEDGAARDAAEGCLRALKYLIESDKELPGNKSLYVRLGARGDWPNIMPPGW 300
Query: 376 DPSA 379
DP+A
Sbjct: 301 DPAA 304
>gi|302803929|ref|XP_002983717.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
gi|300148554|gb|EFJ15213.1| hypothetical protein SELMODRAFT_118907 [Selaginella moellendorffii]
Length = 305
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 204/304 (67%), Gaps = 6/304 (1%)
Query: 82 EFSDGSAEIELRLQLG-SLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDKIK 140
+F D E+ELRLQ+ E SSK++ ++A L V + TL+ +L+ +IK
Sbjct: 2 QFRDDGGELELRLQVPPDHEEISSKNVAINAHDFSLDVALMSQKGIRTLLSIPRLYSRIK 61
Query: 141 PTETIWY-----IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDS 195
P ET+WY IDED++V++LKKQD WP ++E+WE L G +LK TSI++VGDS
Sbjct: 62 PIETMWYALCRFIDEDEIVLSLKKQDVTQPWPGLLEAWEYLGKGVAGMLKATSIYIVGDS 121
Query: 196 TEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSH 255
T +N VA ELA+ LGY PL +K+L+E K ++D + E D+V EC V E+LS
Sbjct: 122 TLINSAVAQELALALGYVPLESKKLMEQLLKTSLDDYAKLEDRDAVAELECKVFETLSKQ 181
Query: 256 VRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSN 315
+R VVATLGG QGAA++ W+ +YAGFTVWLS++++ DE A++EA + ++G + YS
Sbjct: 182 LRVVVATLGGVQGAASKPHSWRFMYAGFTVWLSRSQSQDEAGAEKEAVKAKEEGSVVYSK 241
Query: 316 ADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGW 375
A+ VV L GW+ A+ A+ L ALK LI+SDK+LPG KSLY+RLG RGDWPNI PPGW
Sbjct: 242 AETVVALSGWEEGAARDAAEGCLRALKYLIESDKELPGNKSLYVRLGARGDWPNIMPPGW 301
Query: 376 DPSA 379
DP+A
Sbjct: 302 DPAA 305
>gi|217072810|gb|ACJ84765.1| unknown [Medicago truncatula]
Length = 240
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/239 (56%), Positives = 173/239 (72%), Gaps = 9/239 (3%)
Query: 13 LSSISQNPISKSETQHFSSPRHSVSIFKPIFISSSLHKSTNVVPIKTHDRRRFTCSNSLS 72
L + NP ++ FS I KP F +SL ++ + +
Sbjct: 11 LRFLPPNPTTRKTFNFFS-------ILKPNF--NSLRSFSHSSLFSLSHKYPLSPCKCSF 61
Query: 73 SIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIET 132
+ P +T+ YEFSD ++E+ELRL +GS++++S+KDI VDA+ T LT+RV +SGS ITLI+T
Sbjct: 62 TAPVSTTTYEFSDNASEMELRLNIGSMDVRSTKDISVDANDTSLTIRVLQSGSPITLIDT 121
Query: 133 NQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLV 192
N LFD+IKP+ETIWYID+D LV+N KK DPELKWPDI+ESWESL AGS QLLKGTSI+L
Sbjct: 122 NPLFDRIKPSETIWYIDDDDLVVNFKKNDPELKWPDIMESWESLAAGSSQLLKGTSIYLA 181
Query: 193 GDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLES 251
GDSTE+N+KVA ELA GLGYTPLSTKELLET++ QT+DSW+LAE SDSV GE VLE+
Sbjct: 182 GDSTEINQKVAEELATGLGYTPLSTKELLETYSNQTVDSWLLAESSDSVAEGEGTVLEA 240
>gi|147767344|emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 170/225 (75%), Gaps = 19/225 (8%)
Query: 12 SLSSISQNPISKSETQH----FSSPRHSVSIF-KPIFISSSLHKSTNVVPIKTHDRRRFT 66
SL SQNP + + H S P+ ++++F P FIS++ RR +
Sbjct: 4 SLFFFSQNPFTSPQISHPKISLSXPKPTLTLFTPPPFISNN-------------ATRRLS 50
Query: 67 CSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSF 126
C +LS+I N S YEFSD S+E+ELRLQLG SS+DIFVDA+ + L + V +SGSF
Sbjct: 51 C-KALSTISLNPSNYEFSDASSEMELRLQLGGGGTLSSRDIFVDAEDSSLKIGVKQSGSF 109
Query: 127 ITLIETNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKG 186
ITL+E N L++KIK +ETIWYIDEDQLV+NLKKQDP+LKWPDIVESWESLTAG+MQLLKG
Sbjct: 110 ITLVEINXLYEKIKSSETIWYIDEDQLVVNLKKQDPDLKWPDIVESWESLTAGAMQLLKG 169
Query: 187 TSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDS 231
TSI++VGDSTE+N+KVA ELAVGLGYTPL+TKELLETFAKQ+IDS
Sbjct: 170 TSIYIVGDSTEINDKVARELAVGLGYTPLNTKELLETFAKQSIDS 214
>gi|116791194|gb|ABK25891.1| unknown [Picea sitchensis]
Length = 140
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 104/131 (79%)
Query: 248 VLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVK 307
+LES++++VR VVATLGG GAA R + W++L+AG TVWLSQ+EA DE SA+EEAR +
Sbjct: 1 MLESINTNVRVVVATLGGTLGAATRPENWKNLHAGLTVWLSQSEAKDEASAEEEARMAKQ 60
Query: 308 DGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDW 367
Y+ ADV+VKL GWD+D A+ A+ L ALK L++SDK+LPGKKSLYIR+GCRGDW
Sbjct: 61 SENQAYAMADVIVKLGGWDSDAARPAAEGCLRALKCLLESDKELPGKKSLYIRMGCRGDW 120
Query: 368 PNIKPPGWDPS 378
PN+ PPGW+PS
Sbjct: 121 PNLLPPGWNPS 131
>gi|356529734|ref|XP_003533443.1| PREDICTED: uncharacterized protein LOC100812288 [Glycine max]
Length = 113
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 91/106 (85%)
Query: 282 GFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
G TVWLS+TEA+DE+SA +E ++VKDG + Y+NADVVVKL GWD +AK+VAQA LSAL
Sbjct: 7 GLTVWLSKTEALDEDSAPQETHKNVKDGIISYTNADVVVKLPGWDPAYAKNVAQACLSAL 66
Query: 342 KQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSAGPNASTDT 387
KQLI+SDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPS+ N + T
Sbjct: 67 KQLIKSDKKLPGKKSLYIRLGCRGDWPNIKPPGWDPSSEDNTTLGT 112
>gi|303277965|ref|XP_003058276.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460933|gb|EEH58227.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 301
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGDS N+ V LA LGY PLST +L+E QT + ++G +V
Sbjct: 90 LKGVTVTFVGDSEGANDAVGRALASALGYVPLSTPDLVEKITGQTRAEIVESDGEGGLVI 149
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQT-----EAMDENSA 298
E V E LS+ +R V++T GG +GA+AR W +L+ F +WL A D +A
Sbjct: 150 AENAVFEQLSTQLRCVISTSGGGKGASARGACWDYLFGHFVIWLDDVDAAAAAAADPAAA 209
Query: 299 KEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLY 358
+ D L S ++V + + A +A ++AL +L+ D++L GKK+ Y
Sbjct: 210 PQREAYEFADAHLVMSTSEVKTQ------EEAIGIASQVVAALGELLAGDEQLAGKKTFY 263
Query: 359 IRLGCRGDWPNIKPPGWD 376
++GCRGDWP ++PPGWD
Sbjct: 264 NKMGCRGDWPTLQPPGWD 281
>gi|217070274|gb|ACJ83497.1| unknown [Medicago truncatula]
Length = 79
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 61/67 (91%)
Query: 313 YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKP 372
Y+NADVVVKLQGWD +AKSVAQ LS LKQLI SDKKLPGKKSLYIRLGCRGDWPNIKP
Sbjct: 4 YTNADVVVKLQGWDPAYAKSVAQGCLSTLKQLILSDKKLPGKKSLYIRLGCRGDWPNIKP 63
Query: 373 PGWDPSA 379
PGWDPS+
Sbjct: 64 PGWDPSS 70
>gi|255071735|ref|XP_002499542.1| predicted protein [Micromonas sp. RCC299]
gi|226514804|gb|ACO60800.1| predicted protein [Micromonas sp. RCC299]
Length = 280
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG ++ VGD+ N VA E+A LGYTPLST +L+E T + + +G +V
Sbjct: 60 LKGVTVTFVGDNESANIAVAQEVAKALGYTPLSTPDLIEKITDSTREQILEEDGEARLVI 119
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL----------SQTEAM 293
E VLE LS+ +R V T GG +GA AR D W +L+ FTVW+ S
Sbjct: 120 AENAVLEQLSTLIRCAVGTSGGGRGATARGDCWDYLFGQFTVWIDDAEAMAAAESDPSTA 179
Query: 294 DENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPG 353
+ A E A H+ V+ K + D A + +L A+ +I+ D ++PG
Sbjct: 180 PQREAYELAEVHL-----------VMSKKECKPGDEAAGIGAQALEAIGSIIKDDPQVPG 228
Query: 354 KKSLYIRLGCRGDWPNIKPPGWD 376
KK Y+++GCRGDWP ++PPGWD
Sbjct: 229 KKGFYVKMGCRGDWPVLQPPGWD 251
>gi|357436723|ref|XP_003588637.1| Shikimate kinase-like protein [Medicago truncatula]
gi|355477685|gb|AES58888.1| Shikimate kinase-like protein [Medicago truncatula]
Length = 124
Score = 124 bits (311), Expect = 8e-26, Method: Composition-based stats.
Identities = 69/126 (54%), Positives = 81/126 (64%), Gaps = 20/126 (15%)
Query: 230 DSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQ 289
+ W+LAEGSDSV GE VL S+SSHVRA VATLGG+ GAA R+DK +HLYAGFTVWLS
Sbjct: 13 NDWLLAEGSDSVAEGEGTVLASISSHVRAAVATLGGKHGAAGRSDKRRHLYAGFTVWLSH 72
Query: 290 TEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDK 349
EA DE+SA+EE R++KD Y+N LSALKQLI S+K
Sbjct: 73 IEASDEDSAREETHRNIKDRITAYTN--------------------GCLSALKQLILSNK 112
Query: 350 KLPGKK 355
KL K
Sbjct: 113 KLSANK 118
>gi|412986476|emb|CCO14902.1| predicted protein [Bathycoccus prasinos]
Length = 420
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAK-QTIDSWMLAEGSDS 240
+LL+G ++ VG++ + N +++ LA L Y+P+S EL+ + ++ + EG
Sbjct: 207 KLLRGVNVVAVGENEKANHQLSELLAPLLAYSPMSVPELIRGISDGKSREDIARLEGDAE 266
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQ-GAAARADKWQHLYAGFTVWLSQTEAMDENSAK 299
+ E V E LS +R +AT G GA AR D W ++ T+W+ DE SAK
Sbjct: 267 ALMVENSVHEQLSQFLRVSLATCGANGVGALARGDCWAWIFGMITIWVD-----DEESAK 321
Query: 300 ---EEARRHVKDGKLGYSNADVVVKLQGWDADHAKS--VAQASLSALKQLIQSDKKLPGK 354
E R + + Y AD+ V L+G + + + +A L +K L+ +D+ GK
Sbjct: 322 LSEENPERFPQ--REAYELADIRVVLKGKELNEEEKGKTVRAVLEGVKALVDNDEHFAGK 379
Query: 355 KSLYIRLGCRGDWPNIKPPGWD 376
KSLY R+GCRGDWP ++ P WD
Sbjct: 380 KSLYTRMGCRGDWPILQAPEWD 401
>gi|223943249|gb|ACN25708.1| unknown [Zea mays]
gi|414867929|tpg|DAA46486.1| TPA: hypothetical protein ZEAMMB73_757972 [Zea mays]
Length = 149
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%)
Query: 64 RFTCSNSLSSIPANTSQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRS 123
R S+S+ PA + YEF+DG+ E+ELRL + L I SSKD+FVD D T L +R
Sbjct: 62 RLRPRASVSTSPAPSKDYEFTDGNGEVELRLDIQKLGIASSKDVFVDVDDTSLLIRAKSD 121
Query: 124 GSFITLIETNQLFDKIKPTETIWYI 148
G+ TL+ LFD+IK +ETIW +
Sbjct: 122 GTLRTLMNVQTLFDRIKSSETIWCV 146
>gi|145348903|ref|XP_001418882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579112|gb|ABO97175.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 171
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
Query: 210 LGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVVNGECDVLES-----LSSHVRAVVATL 263
L Y+P+S LLE T A+ + + + D + + VLE+ L++ +R VAT
Sbjct: 1 LAYSPVSVPALLESTMARGAEEGMTMDDDDDMSEDAKALVLENSAHEQLATFLRLCVATC 60
Query: 264 GGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQ 323
GG +GA AR D W L+ TVW+ E DE++ + +A Y ++V V ++
Sbjct: 61 GGGRGATARGDCWTWLFGAITVWV-DAEGADESAPQRQA----------YELSEVRVVVK 109
Query: 324 GWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPG 374
A ++ A L+ + L+ +D +L GKK+LY+R GCRGDWP++KPPG
Sbjct: 110 KGVAVDGEAAADQVLAGIDALVDADDQLCGKKNLYVRFGCRGDWPDLKPPG 160
>gi|302836259|ref|XP_002949690.1| hypothetical protein VOLCADRAFT_104463 [Volvox carteri f.
nagariensis]
gi|300265049|gb|EFJ49242.1| hypothetical protein VOLCADRAFT_104463 [Volvox carteri f.
nagariensis]
Length = 340
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 26/206 (12%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT-IDSWMLAEGSDSVV 242
LK S+ +GD +N VA + LG+ + +++ K T +D + E + S
Sbjct: 102 LKRISLTFLGDDHALNFAVAKIVGSRLGWFAVDIPKIICGMRKVTSLDQLSVEERAAS-- 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E +VL L + R + L G GA AR WQ L+ VW+ + + + E
Sbjct: 160 --EMEVLRGLRTQFRVIATPLPG--GAIAREAAWQDLWGSVIVWIDEEDKLRPKPRTAE- 214
Query: 303 RRHVKDGKLGYSN-ADVVVK--------LQGWDA--DHAKSVAQASLSALKQLIQSDKKL 351
++ Y + A+VVV+ ++G ++ + AK+VA+ L L + +L
Sbjct: 215 -------RVLYEDKAEVVVRAKVQKGFAVKGGNSLDNRAKAVAELLLPRLSDHLAEFPEL 267
Query: 352 PGKKSLYIRLGCRGDWPNIKPPGWDP 377
+K Y+ LGCRGDWP ++PP W P
Sbjct: 268 ADRKRQYVELGCRGDWPELQPPQWSP 293
>gi|308805879|ref|XP_003080251.1| unnamed protein product [Ostreococcus tauri]
gi|116058711|emb|CAL54418.1| unnamed protein product [Ostreococcus tauri]
Length = 241
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G S+ +VGD+ N+ VA LA GY +S L+E+ A D E + +
Sbjct: 44 LEAMRGVSVCVVGDNERANDGVARALAKRFGYACVSVPALVESAASAVNDEDEDDESAAA 103
Query: 241 VVNGECDVLES-----LSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDE 295
+ +LE+ LS+++R VAT GG +GA AR D W L+ TVW+ + E DE
Sbjct: 104 SPEAKRLMLENSAHEQLSTYLRLCVATSGGGRGATARGDCWTWLFGMITVWVDE-EGADE 162
Query: 296 NSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKK 355
+ + EA Y ++V V + D+ +SVA + +K L+ +D + G+K
Sbjct: 163 TAPQREA----------YELSEVRVVVSKGKDDY-ESVADRVMDGIKTLLDADADICGRK 211
Query: 356 SLYIR 360
+LYIR
Sbjct: 212 NLYIR 216
>gi|428201800|ref|YP_007080389.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
gi|427979232|gb|AFY76832.1| shikimate kinase [Pleurocapsa sp. PCC 7327]
Length = 185
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G S+FLVG V LA LGY T L+E A QTI+ +G +
Sbjct: 4 LLQGVSVFLVGIMGTGKTTVGQILAQQLGYRFFDTDVLIERVAGQTINEIFARQGEERFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E VL LS++ ++V+AT GG G R W +L+ G VWL + E + + A++
Sbjct: 64 ELETQVLAELSAYTKSVIAT-GG--GIVMRPINWSYLHHGLIVWLDAPVELLRKRLAEDT 120
Query: 302 AR 303
R
Sbjct: 121 TR 122
>gi|303289006|ref|XP_003063791.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454859|gb|EEH52164.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 167
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G+S+FLVG V +LA LGY T E++E+ K TI EG D
Sbjct: 5 LDGSSVFLVGMMGTGKSSVGKKLAAELGYNFFDTDEIIESVTKMTIPEIFAEEGEDGFRE 64
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E +L ++S+ + VVAT G G R W HL G + LS SAK AR
Sbjct: 65 IETQILAEIASYKKCVVATGG---GIVKRKANWMHLRNGIVLCLS-------GSAKLLAR 114
Query: 304 R 304
R
Sbjct: 115 R 115
>gi|126657832|ref|ZP_01728985.1| shikimate kinase [Cyanothece sp. CCY0110]
gi|126620772|gb|EAZ91488.1| shikimate kinase [Cyanothece sp. CCY0110]
Length = 188
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 11/160 (6%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G ++FL+G V +LA L Y T L+E KQ+I + +G ++
Sbjct: 6 LLQGVNVFLIGMMGTGKTTVGKKLAQRLNYRFFDTDVLIEKVTKQSITNIFATQGEETFR 65
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
+ E VL LSS ++V+AT GG G ++ W +L+ G +WL + +++ AK
Sbjct: 66 DLESQVLSELSSCTKSVIAT-GG--GIVLKSINWSYLHHGLIIWLDAPVSVLNKRLAKNT 122
Query: 302 ARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
R +++ D+ +KLQ + AQ+ L +
Sbjct: 123 TRPLLQE-------TDLQLKLQSLLEERHSLYAQSDLQII 155
>gi|334121375|ref|ZP_08495445.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
gi|333455089|gb|EGK83750.1| Shikimate kinase [Microcoleus vaginatus FGP-2]
Length = 183
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M L+G +I+LVG V LA L Y T EL+ A Q+I EG ++
Sbjct: 1 MDGLRGVNIYLVGMMGSGKTTVGRILAKKLKYRFFDTDELIVRVANQSIAEIFAQEGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL------------- 287
E VL LS++ +VVAT G G AR+ W +L+ G VWL
Sbjct: 61 FRELETKVLGELSAYQNSVVATGG---GIVARSMNWGYLHYGVVVWLDVPVDQLYDRLRS 117
Query: 288 -SQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ + E K + + +K+ + Y+ AD V++ + ++VA ++ ++++I+
Sbjct: 118 DTARPLLQEGEIKSKLQSLLKERERFYTQAD--VRVYAGVGEKPEAVATRAIEEIQKVIK 175
Query: 347 SDKK 350
S+++
Sbjct: 176 SERR 179
>gi|332711887|ref|ZP_08431817.1| shikimate kinase [Moorea producens 3L]
gi|332349215|gb|EGJ28825.1| shikimate kinase [Moorea producens 3L]
Length = 182
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG ++FL+G V LA LGY T L+E A +TI+ +G ++
Sbjct: 4 LLKGINVFLIGMMGAGKTTVGGLLASELGYGFCDTDALIEQIAGKTINEIFAEDGEETFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E VL LS++ + +VAT G G + W +L+ G VWL AM +E+
Sbjct: 64 QLETQVLSQLSAYQQLIVATGG---GIVLKPQNWSYLHYGLVVWLDVPVAMLIERLQEDT 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|428311952|ref|YP_007122929.1| shikimate kinase [Microcoleus sp. PCC 7113]
gi|428253564|gb|AFZ19523.1| shikimate kinase [Microcoleus sp. PCC 7113]
Length = 178
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M+ LKG ++FLVG V LA LGY+ + T ++E A ++I+ EG ++
Sbjct: 1 MKELKGINVFLVGMMGTGKTTVGDLLARQLGYSFVDTDNVIEKAAGKSINQIFADEGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL LS+H R VAT G G + W +L+ G +WL
Sbjct: 61 FRQLESEVLSHLSAHTRLTVATGG---GIVLKRFNWSYLHHGLVIWL 104
>gi|443478875|ref|ZP_21068568.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
gi|443015775|gb|ELS30595.1| shikimate kinase [Pseudanabaena biceps PCC 7429]
Length = 185
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L GT+IFLVG + LA L Y + T L+E A ++I +G D
Sbjct: 1 MLNGTNIFLVGMMGAGKSTIGKLLAQKLSYNFVDTDPLIEQCAGKSITDIFTHDGEDLFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +SS+ R VVAT G G R+ W HL+ G VW+
Sbjct: 61 DLEQQVLSQVSSYTRLVVATGG---GIVLRSLNWSHLHDGIVVWI 102
>gi|255087652|ref|XP_002505749.1| predicted protein [Micromonas sp. RCC299]
gi|226521019|gb|ACO67007.1| predicted protein [Micromonas sp. RCC299]
Length = 269
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+ L G+S+FLVG V +LA LGY+ T E++E K TI G D
Sbjct: 59 EALDGSSLFLVGMMGTGKSSVGKKLAASLGYSFFDTDEVIEQVTKTTIPEIFAESGEDGF 118
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM-------- 293
E VL ++++ + VVAT G G + W HL G + L+ T +
Sbjct: 119 REIETQVLAEIAAYKKCVVATGG---GVVKKKANWMHLRNGVVLCLTGTPTLLAARITRD 175
Query: 294 -------------DENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSA 340
D ++ + +K+ Y+NADV V+L +AD A V +L
Sbjct: 176 GAETRPLFKDVGDDVDAIAAKVEEMMKERAPMYANADVQVRLA--EADGAPGVEGETLDE 233
Query: 341 LKQLI 345
L I
Sbjct: 234 LNVRI 238
>gi|428769981|ref|YP_007161771.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
gi|428684260|gb|AFZ53727.1| shikimate kinase [Cyanobacterium aponinum PCC 10605]
Length = 183
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LLKG +I+L+G V LA L Y L T ++ ++++I+ +G D
Sbjct: 3 ELLKGLNIYLIGMMGSGKTTVGELLAKELEYRFLDTDAIISAVSEKSINQIFAEDGEDEF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E DVL+ +S+++ V+AT GG G R W HL G VWL+
Sbjct: 63 RQLESDVLQEVSAYLYTVIAT-GG--GIILRQQNWSHLRDGMVVWLN 106
>gi|428306365|ref|YP_007143190.1| shikimate kinase [Crinalium epipsammum PCC 9333]
gi|428247900|gb|AFZ13680.1| shikimate kinase [Crinalium epipsammum PCC 9333]
Length = 184
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L G +++L+G V EL+ LGY T L+E A QTI G +
Sbjct: 1 MLNGVNVYLIGMMGAGKTTVGRELSNQLGYRFFDTDTLIEQVASQTITQIFTDTGEEGFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E VL +S++ + +AT G G + + W +L+ G VWL + E + E A++
Sbjct: 61 KLESQVLSEISAYTKLAIATGG---GIVLKRENWSYLHHGLIVWLDAPVELLIERLAQDN 117
Query: 302 ARRHVKD 308
R ++D
Sbjct: 118 TRPLLQD 124
>gi|307109411|gb|EFN57649.1| hypothetical protein CHLNCDRAFT_34609 [Chlorella variabilis]
Length = 263
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Query: 169 IVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQT 228
+ + E A ++ L+GTS+FLVG V ++ LGY T L+E +++
Sbjct: 90 LTQQIEDTAAEVVEGLQGTSLFLVGMMGSGKSTVGKLISQALGYCFFDTDTLIEQLSQKK 149
Query: 229 IDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
+ +G +S E VL LS VVAT G G +A+ W H+ G +VWL+
Sbjct: 150 VSEIFAEDGEESFRELETQVLAELSPFKNCVVATGG---GVPTKAENWGHMQGGVSVWLN 206
>gi|427734518|ref|YP_007054062.1| shikimate kinase [Rivularia sp. PCC 7116]
gi|427369559|gb|AFY53515.1| shikimate kinase [Rivularia sp. PCC 7116]
Length = 181
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA L Y + T E++ AK++I+ AEG
Sbjct: 4 LLQGINLYLIGMMGAGKTTVGRLLASELEYGFVDTDEVITASAKKSINQIFAAEGEAEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E DVL +S++ R VAT GG G + W +L+ G VWL T + + KE+
Sbjct: 64 KLESDVLSQVSAYTRLTVAT-GG--GIVLKRQNWSYLHHGLIVWLDATAELLYDRLKEDT 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|67922250|ref|ZP_00515764.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|416389334|ref|ZP_11685333.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
gi|67855953|gb|EAM51198.1| Shikimate kinase [Crocosphaera watsonii WH 8501]
gi|357264243|gb|EHJ13156.1| Shikimate kinase I (AroE I) [Crocosphaera watsonii WH 0003]
Length = 188
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLL+G ++FLVG V LA L Y + L+E QTI+ +G ++
Sbjct: 5 QLLQGVNVFLVGMMGTGKTTVGQNLAQRLNYRFFDSDVLVEKVTGQTINDIFATQGEETF 64
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQT-EAMDENSAKE 300
E VL L+S ++V+AT GG G+ + W +L+ G VWL + + + AK+
Sbjct: 65 RQLETQVLSELASCTKSVIAT-GG--GSVLKPKNWSYLHHGLIVWLDVSLPILTQRLAKD 121
Query: 301 EARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
R ++ D+ +KLQ AQ+ L +
Sbjct: 122 TTRPLLQ-------TTDLSLKLQSLSEQRNPLYAQSDLRII 155
>gi|159479558|ref|XP_001697857.1| shikimate kinase-related protein [Chlamydomonas reinhardtii]
gi|158273955|gb|EDO99740.1| shikimate kinase-related protein [Chlamydomonas reinhardtii]
Length = 324
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 24/200 (12%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LK S+ +GD ++N VA + LG+ P+ +++ T ++ D L E V
Sbjct: 21 LKRVSLTFIGDDHQLNYAVAKVVGSRLGWFPVDGLKVM-TGMRKVPDLAALTE--PERVA 77
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA----------- 292
E ++L L + R + L GA + W+ L+ VW+ + +
Sbjct: 78 TEAELLRGLRNQFRVIATPL--PAGAVLQDAVWKDLWGSVIVWIDEDDKSTPKPRTPERQ 135
Query: 293 MDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLP 352
+ E+ A+ R V+ G G L+G A++VA L L + +L
Sbjct: 136 LYEDRAELAVRVKVQKG-FGVRGGQT---LEG----RARAVADTLLPRLSDFLAEKPELT 187
Query: 353 GKKSLYIRLGCRGDWPNIKP 372
+K Y+ GCRGDWP ++P
Sbjct: 188 ERKRQYVERGCRGDWPELQP 207
>gi|449019708|dbj|BAM83110.1| shikimate kinase [Cyanidioschyzon merolae strain 10D]
Length = 287
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG + LA L Y + T ++E +++I +G ++ +
Sbjct: 83 LHGASVYLVGMMGSGKSTLGAYLAKALEYAFIDTDVIIERTLQKSIPEIFAQDGEETFRD 142
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VLESL SHVR VVAT G G R W L+ G V+L+ T M
Sbjct: 143 VESLVLESLQSHVRTVVATGG---GVVLRQRNWGTLHTGLVVYLNGTPDM 189
>gi|284929680|ref|YP_003422202.1| shikimate kinase [cyanobacterium UCYN-A]
gi|284810124|gb|ADB95821.1| shikimate kinase [cyanobacterium UCYN-A]
Length = 183
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +IFL+G LA L Y T L++ ++TI + EG +S
Sbjct: 5 LLQGINIFLIGMMGSGKTTTGKRLAEHLNYRFFDTDTLIKQVKQKTISDIFVEEGEESFR 64
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL L+S R+V+AT GG G + + W +L+ G +WL
Sbjct: 65 ILESNVLSELASCTRSVIAT-GG--GIVLKQENWSYLHHGLIIWL 106
>gi|119512821|ref|ZP_01631889.1| shikimate kinase [Nodularia spumigena CCY9414]
gi|119462543|gb|EAW43512.1| shikimate kinase [Nodularia spumigena CCY9414]
Length = 192
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ A ++I+ EG +
Sbjct: 15 LLQGVNLYLIGMMGAGKTTVGQLLAKHLGYGFLDTDSVITQSAGRSINQLFAEEGEAAFR 74
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEE 301
E DVL + ++ R +AT G G R + W +L+ G VWL E + A++
Sbjct: 75 QLESDVLAQVCAYTRLTIATGG---GIILRTENWSYLHHGLVVWLDVPVELLYTRLAEDT 131
Query: 302 ARRHVKD----GKLG---------YSNAD--VVVKLQGWDADHAKSVAQASLSALK 342
R ++D GKL YS AD + V+ + D A V +A S LK
Sbjct: 132 TRPLLQDADPQGKLRSLLEQRTPLYSQADLKITVREEQTPEDIANRVIEAIPSVLK 187
>gi|354568276|ref|ZP_08987441.1| Shikimate kinase [Fischerella sp. JSC-11]
gi|353540639|gb|EHC10112.1| Shikimate kinase [Fischerella sp. JSC-11]
Length = 181
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G + LA LGY + T LLE A +TI+ EG +
Sbjct: 9 LQGINLYLIGMMGAGKSTLGRMLAYELGYGFVDTDNLLEKAAGKTINQLFTEEGEAAFRQ 68
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E +VL + + + V+AT G G R D W +L+ G +WL + N E+
Sbjct: 69 LESEVLAQVCAFTKLVIATGG---GIVLRRDNWSYLHHGIIIWLDVAVEILYNRLSEDTT 125
Query: 304 R 304
R
Sbjct: 126 R 126
>gi|254417028|ref|ZP_05030775.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
gi|196176195|gb|EDX71212.1| shikimate kinase [Coleofasciculus chthonoplastes PCC 7420]
Length = 177
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G V LA LGY + T L+E A QTI+ G D
Sbjct: 5 LLKGINVYLIGMMGVGKTTVGQRLAKELGYRFVDTDVLIEQVAGQTINQIFADRGEDEFR 64
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S++ VAT GG G + W +L+ G VWL
Sbjct: 65 QLEAQVLSEVSAYTNLTVAT-GG--GIVLKQMNWSYLHQGLIVWL 106
>gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942]
gi|81596488|sp|Q5N4D3.1|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK
gi|116257513|sp|Q31PU5.1|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK
gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301]
gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942]
Length = 190
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +FLVG + LA LGYT + T L+E ++I ++G
Sbjct: 7 LNGLDLFLVGLMGSGKTTIGKLLAESLGYTYVDTDSLIENVTGRSIPEIFASDGEAGFRQ 66
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VLE ++S+ R VVAT G G R + W +L G +WL
Sbjct: 67 IETQVLEEVASYRRLVVATGG---GIVIRPENWSYLQQGLVIWL 107
>gi|427707062|ref|YP_007049439.1| shikimate kinase [Nostoc sp. PCC 7107]
gi|427359567|gb|AFY42289.1| shikimate kinase [Nostoc sp. PCC 7107]
Length = 186
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G S++L+G V LA LGY + T +++ ++I EG +
Sbjct: 4 LLQGVSLYLIGMMGAGKTTVGRLLAPQLGYRFVDTDDVIAKATGRSITQLFAEEGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E DVL +S+H+ VAT G G R + W +L G VWL + N E+
Sbjct: 64 QLESDVLAQVSAHINLTVATGG---GIVVRRENWGYLRHGLIVWLDLPVELLYNRLAEDT 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|172036297|ref|YP_001802798.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|354553090|ref|ZP_08972397.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
gi|171697751|gb|ACB50732.1| shikimate kinase [Cyanothece sp. ATCC 51142]
gi|353554920|gb|EHC24309.1| Shikimate kinase [Cyanothece sp. ATCC 51472]
Length = 189
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLL+G ++FL+G V +LA L Y + L+E +Q I +G ++
Sbjct: 6 QLLQGVNVFLIGMMGTGKTTVGQKLAQRLNYRFFDSDVLIERVTQQRISDIFATQGEETF 65
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEE 301
E VL L+S ++V+AT GG G + W +L+ G VWL + K++
Sbjct: 66 RELESQVLSELASCTKSVIAT-GG--GIILKPINWSYLHHGLIVWLDAPVPILTKRLKKD 122
Query: 302 ARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
R + D+ +KLQ + AQ L +
Sbjct: 123 KTRPL------LQQTDLSLKLQSLLEERRYLYAQCDLQII 156
>gi|307155208|ref|YP_003890592.1| shikimate kinase [Cyanothece sp. PCC 7822]
gi|306985436|gb|ADN17317.1| Shikimate kinase [Cyanothece sp. PCC 7822]
Length = 183
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
++ LLKG SIFL+G V LA LGY + L+E + T++ G +
Sbjct: 2 TLNLLKGVSIFLIGMPGTGKTTVGELLAEKLGYRFFDSDVLIERVSGNTVNEIFNTLGEE 61
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAK 299
+ E VL L S+ ++++AT GG G + W +L G +WL + K
Sbjct: 62 AFRKIESQVLSELCSYTKSIIAT-GG--GIVIKQMNWSYLRHGLIIWLDSPVDLLIQRLK 118
Query: 300 EEARR 304
E++ R
Sbjct: 119 EDSTR 123
>gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002]
gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002]
Length = 186
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +I+L+G +A +A + Y L + ++ET AKQ+I G
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAEIIAELMNYRSLDSDSIIETLAKQSISEIFAEMGEAEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ ++ R VVAT GG + A W +L G T+WL
Sbjct: 64 KLETQVLKQIAVQTRTVVATGGGIVVSQA---NWYYLRQGLTIWL 105
>gi|16329403|ref|NP_440131.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|383321144|ref|YP_005381997.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324314|ref|YP_005385167.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490198|ref|YP_005407874.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435464|ref|YP_005650188.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|451813562|ref|YP_007450014.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|2492976|sp|P72796.1|AROK_SYNY3 RecName: Full=Shikimate kinase; Short=SK
gi|1651884|dbj|BAA16811.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|339272496|dbj|BAK48983.1| shikimate kinase [Synechocystis sp. PCC 6803]
gi|359270463|dbj|BAL27982.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273634|dbj|BAL31152.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359276804|dbj|BAL34321.1| shikimate kinase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957278|dbj|BAM50518.1| shikimate kinase [Bacillus subtilis BEST7613]
gi|451779531|gb|AGF50500.1| shikimate kinase [Synechocystis sp. PCC 6803]
Length = 189
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G ++FL+G V LA LGY L+E A + I +G D+ +
Sbjct: 10 LQGVNLFLIGMMGSGKSTVGPLLAEQLGYRFFDADVLIERVAGKAIADIFAEDGEDTFRD 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL L++ R+V+AT G G R W +L+ G +WL
Sbjct: 70 LETEVLGHLAAQTRSVIATGG---GVVLRRQNWSYLHHGLVIWL 110
>gi|427728049|ref|YP_007074286.1| shikimate kinase [Nostoc sp. PCC 7524]
gi|427363968|gb|AFY46689.1| shikimate kinase [Nostoc sp. PCC 7524]
Length = 183
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY + T ++ AK++I+ EG +
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGQLLAKQLGYGFIDTDNVIAQSAKKSINQIFAEEGEATFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E DVL + ++ + VAT G G R + W +L+ G VWL + N E+
Sbjct: 64 QLESDVLGQVCAYTKLTVATGG---GIVLRRENWSYLHHGLIVWLDVPVELLYNRLAEDT 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|428773167|ref|YP_007164955.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
gi|428687446|gb|AFZ47306.1| shikimate kinase [Cyanobacterium stanieri PCC 7202]
Length = 184
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LL+G +++L+G V LA L Y L T +ET +++I+ +G +
Sbjct: 3 RLLRGLNVYLIGMMGSGKSTVGKFLAHKLAYRFLDTDNTIETLTQKSINKIFEEDGEEVF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +SS++ V++T GG G + D W HL G +WL
Sbjct: 63 RTLENQVLAQVSSYLHTVIST-GG--GIVLKKDNWAHLRDGMVIWL 105
>gi|254422265|ref|ZP_05035983.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
gi|196189754|gb|EDX84718.1| shikimate kinase domain protein [Synechococcus sp. PCC 7335]
Length = 239
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 34/214 (15%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LK T+++L+G + +LA LGY + T L+E A QT+ + G
Sbjct: 38 LKKTNLYLIGMMGAGKTTIGRKLANRLGYGFVDTDALIEQSANQTVSELFASAGESVFRQ 97
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-----QTEAMDENSA 298
E VL +S++ VVAT G G W +L+ G +WL + +S+
Sbjct: 98 LETQVLSQVSTYTNLVVATGG---GVIIEQMNWSYLHHGIIIWLDVPIPILVARLSGDSS 154
Query: 299 K---EEARRHVKDGKLG-------------YSNADVVVKLQGWDADHAKSVAQASLSALK 342
+ +++R +KD L Y+ AD+ + G++ L+A++
Sbjct: 155 RPLIKDSRPLIKDTNLSDRLAGLIAERRDLYAQADIRI---GYEGKSVGRTCDRILNAIQ 211
Query: 343 QLIQSDKKLPGKKSLYIRLGCRGDWPNIKPPGWD 376
I+ D KL + + + P+IKP +D
Sbjct: 212 ANIRPDPKLAVDQ-------IQINQPSIKPVSFD 238
>gi|86609195|ref|YP_477957.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|115312166|sp|Q2JKT7.1|AROK_SYNJB RecName: Full=Shikimate kinase; Short=SK
gi|86557737|gb|ABD02694.1| shikimate kinase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 187
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G V ELA L + T L+E +I G +
Sbjct: 10 LRGVNVYLIGMMGSGKSTVGSELAAQLRFQFFDTDGLVEQVGGSSIAQIFAEHGEAYFRD 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS+ R V+AT G G R W +L+ G TVWL
Sbjct: 70 LETQVLAQLSSYTRLVIATGG---GIVLRPKNWSYLHHGLTVWL 110
>gi|428209800|ref|YP_007094153.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
gi|428011721|gb|AFY90284.1| shikimate kinase [Chroococcidiopsis thermalis PCC 7203]
Length = 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 179 GSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS 238
G LLKG +++LVG + LA LGY + T ++E +++I+ +G
Sbjct: 2 GDSDLLKGINLYLVGMMGAGKTTIGKILAAQLGYGFVDTDAVIEQLTQKSINQIFAEKGE 61
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENS 297
+ E VL + ++ R ++T G G R + W +L+ G VWL E +
Sbjct: 62 TTFRQIETKVLSEVCAYTRLAISTGG---GIVLRRENWSYLHYGLIVWLDVPVEQLYSRL 118
Query: 298 AKEEARRHVKD----GKL 311
A++ R ++D GKL
Sbjct: 119 AEDNTRPLLQDPDPIGKL 136
>gi|282900529|ref|ZP_06308473.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
gi|281194582|gb|EFA69535.1| Shikimate kinase [Cylindrospermopsis raciborskii CS-505]
Length = 188
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
QLLKG +++L+G + LA + Y+ + T E++ A + I + EG +
Sbjct: 7 QLLKGVNLYLIGMMGSGKTTIGNLLAQAVNYSFIDTDEVIVKAAGKPISDIFITEGEPAF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKE 300
E +VL + ++ + +AT G G R + W +L+ G +WL E + E ++
Sbjct: 67 RQLESNVLAQVCAYTKLTIATGG---GIVLRRENWSYLHHGLIIWLDVPVEILLERLKED 123
Query: 301 EARRHVKD 308
+ R ++D
Sbjct: 124 QTRPLLQD 131
>gi|412985827|emb|CCO17027.1| shikimate kinase [Bathycoccus prasinos]
Length = 305
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+ +S+FL+G V +LA LGY T +L+E KQ + +G +
Sbjct: 83 LQSSSVFLLGLMGTGKTTVGKKLADALGYGYFDTDQLIEQICKQKVHEIFEEDGEEGFRE 142
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E +L ++S+ R VV+T G G + W HL+ G TV L + + AR
Sbjct: 143 TESAILAEVASYKRVVVSTGG---GIVTVRNNWMHLHNGVTVCL-------QGDHRTLAR 192
Query: 304 RHVKDG 309
R KDG
Sbjct: 193 RVHKDG 198
>gi|427416801|ref|ZP_18906984.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
gi|425759514|gb|EKV00367.1| shikimate kinase [Leptolyngbya sp. PCC 7375]
Length = 188
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LLKGT+++LVG + LA L Y + T +++ Q+I+ A+G
Sbjct: 2 TTELLKGTNLYLVGMMGSGKTTIGKHLAKLLNYRFIDTDDVIVQATGQSINDIFAAQGEA 61
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSA- 298
+ + E VL ++ + V+AT GG + W +L +G VW++ A+DE A
Sbjct: 62 AFRDIETQVLGQVAPYTHTVIATGGGM---VIKQQNWSYLQSGLVVWIN--VAVDELIAR 116
Query: 299 --KEEARRHVKDGKL 311
++++R +K+G L
Sbjct: 117 LSRDKSRPLLKEGDL 131
>gi|302830073|ref|XP_002946603.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
gi|300268349|gb|EFJ52530.1| hypothetical protein VOLCADRAFT_86714 [Volvox carteri f.
nagariensis]
Length = 352
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 52/210 (24%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
L+G +I+L+G V L+ L Y T ++E K+ + EG +
Sbjct: 106 LRGCNIWLIGMMGSGKSTVGKMLSNTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQEYFR 165
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-------------- 288
N E +++ LS + V+AT G GA R + W +++ G WL+
Sbjct: 166 NCESQIIKELSPYRNLVIATGG---GAVLRPENWGYMHLGIVCWLNGDVDLLARRVVRDG 222
Query: 289 -----------------------QTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGW 325
A D+ +A +E RR Y NADVVV L+G+
Sbjct: 223 LEKRPLLAAASAADGGGAEGGGALGVARDKLAALQEQRRRY------YENADVVVTLEGY 276
Query: 326 DADHAKSVAQAS-----LSALKQLIQSDKK 350
D A+ LSA+ + +Q+ K+
Sbjct: 277 GKDAEAGAPTAAVMYRLLSAINEKVQAKKR 306
>gi|168031989|ref|XP_001768502.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680215|gb|EDQ66653.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+GT IFL+G V LA LGY + +L++ Q D ++E +
Sbjct: 112 LQGTCIFLIGMMDNGKASVGKMLAKELGYYFFDSNDLVQ----QAADGEEISENEEGYRE 167
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS---QTEAMDE----- 295
E +VL+ LSS R VVAT G + W +L G VW+ +T A D
Sbjct: 168 AETEVLKQLSSMGRLVVAT---GAGTVLNTENWGYLRHGIVVWIDIPVETVAKDAKTRQL 224
Query: 296 ---NSAKEEA----RRHVKDGKLGYSNADVVVKLQ 323
NS+ +EA + ++ K Y NAD V +Q
Sbjct: 225 LVPNSSDDEALSKLTKMYEERKEVYMNADATVSIQ 259
>gi|434393629|ref|YP_007128576.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
gi|428265470|gb|AFZ31416.1| shikimate kinase [Gloeocapsa sp. PCC 7428]
Length = 190
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG +++LVG V LA LGY + T E++ +Q+I G +
Sbjct: 10 VLKGVNLYLVGMMGTGKTTVGRALATKLGYRFVDTDEIITQVTQQSISEVFATSGEAAFR 69
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E VL + ++ +AT G G + + W +L+ G VWL + TE + + ++
Sbjct: 70 QIETQVLAKVCAYTHLAIATGG---GIVLQRENWSYLHHGLIVWLDAPTELLSTRLSADD 126
Query: 302 ARRHVKDGKLG-------------YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSD 348
R ++ G L YS AD+ V + + + +A L + Q+++
Sbjct: 127 TRPLLQTGDLRSQLETILQQRQPLYSQADLRVVVT--SEETPEQLATRILQEIPQVLKQP 184
Query: 349 KKLP 352
LP
Sbjct: 185 STLP 188
>gi|257058860|ref|YP_003136748.1| shikimate kinase [Cyanothece sp. PCC 8802]
gi|256589026|gb|ACU99912.1| Shikimate kinase [Cyanothece sp. PCC 8802]
Length = 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LL+G +I+L+G + LA L Y T L+E +Q+I+ + +G
Sbjct: 3 TQKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIERVTQQSINDIFVTQGET 62
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAK 299
+ E VL +++ R+V+AT GG G + W +L+ G +WL + + +
Sbjct: 63 VFRDIETQVLSEVAACTRSVIAT-GG--GIVLNSQNWSYLHHGLIIWLDVSIKLLKTRLI 119
Query: 300 EEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
+ R + +D+ +KL+ D +A LS +
Sbjct: 120 NDTTRPL------LKESDLTLKLKTLDEQRRNLYNKADLSIV 155
>gi|443324667|ref|ZP_21053405.1| shikimate kinase [Xenococcus sp. PCC 7305]
gi|442795735|gb|ELS05084.1| shikimate kinase [Xenococcus sp. PCC 7305]
Length = 187
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + LA L Y T L+E A++TI EG
Sbjct: 17 LLKGVNVYLIGMMGSGKSTIGKILAQKLNYRFFDTDVLIEKVAQKTIPEIFATEGEAYFR 76
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
+ E VL +S++ +V+AT GG + W L G VWL + + + E AK+
Sbjct: 77 DLETKVLHEVSAYNHSVIATGGGM---IQKTVNWSFLRQGLIVWLDADLDVLLERVAKD- 132
Query: 302 ARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKL 351
+N + KLQ + AQA L + I++ K++
Sbjct: 133 ------------TNRPLAGKLQSLLEKRSSLYAQADLRIVSDRIKTPKQV 170
>gi|86607258|ref|YP_476021.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
gi|115312165|sp|Q2JRJ6.1|AROK_SYNJA RecName: Full=Shikimate kinase; Short=SK
gi|86555800|gb|ABD00758.1| shikimate kinase [Synechococcus sp. JA-3-3Ab]
Length = 189
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G + ELA L T L+E A +I +G
Sbjct: 10 LRGVTVYLIGMMASGKSTLGAELAAQLRRPFFDTDALVEQVAGCSIAQIFAEQGEAHFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LS + R VVAT G G R W +L+ G TVWL
Sbjct: 70 LETQVLAQLSGYTRLVVATGG---GIVLRPKNWSYLHHGLTVWL 110
>gi|75906776|ref|YP_321072.1| shikimate kinase [Anabaena variabilis ATCC 29413]
gi|115312135|sp|Q3MFQ9.1|AROK_ANAVT RecName: Full=Shikimate kinase; Short=SK
gi|75700501|gb|ABA20177.1| shikimate kinase [Anabaena variabilis ATCC 29413]
Length = 181
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ AK++I+ G
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGHLLAQELGYGFLDTDNVIAQAAKKSINEIFAEAGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + S+ + VAT G G R + W +L+ G VWL
Sbjct: 64 QIESDVLAQVCSYTKLTVATGG---GIVLRRENWSYLHHGLIVWL 105
>gi|119491298|ref|ZP_01623352.1| shikimate kinase [Lyngbya sp. PCC 8106]
gi|119453462|gb|EAW34624.1| shikimate kinase [Lyngbya sp. PCC 8106]
Length = 193
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA Y + T E++ A Q+I+ +G ++
Sbjct: 4 LLRGINLYLIGMMGAGKTTVGKLLAKQFNYRFIDTDEVITQVAGQSINQIFTEQGEEAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E VL L +H R VVAT GG RA+ W +L G VWL + KE+
Sbjct: 64 TLESQVLSGLCAHQRLVVATGGGI--ILQRAN-WGYLRHGLIVWLDVSPEDLYQRLKEDT 120
Query: 303 RRHV--KDGKLG------------YSNADVVVKLQGWD 326
R + D LG Y+ ADV V + D
Sbjct: 121 TRPLLQHDNPLGRLQELLKQRESLYAEADVKVTITQHD 158
>gi|440682487|ref|YP_007157282.1| shikimate kinase [Anabaena cylindrica PCC 7122]
gi|428679606|gb|AFZ58372.1| shikimate kinase [Anabaena cylindrica PCC 7122]
Length = 184
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T +++ A ++I+ + EG
Sbjct: 4 LLRGVNLYLIGMMGVGKTTVGRLLAKELGYGFLDTDDVIVKAAGKSINEIFVDEGEAEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E DVL + ++ + +AT G G R + W +L G VWL + E + A+++
Sbjct: 64 QLESDVLAQVCAYTKLTIATGG---GIVLRRENWGYLRHGLIVWLDAPVEILLNRLAEDD 120
Query: 302 ARRHVKD----GKLG---------YSNADV 318
R ++D GKL YS AD+
Sbjct: 121 TRPLLQDSDPEGKLRSLLEQRQSLYSQADL 150
>gi|428297809|ref|YP_007136115.1| shikimate kinase [Calothrix sp. PCC 6303]
gi|428234353|gb|AFZ00143.1| shikimate kinase [Calothrix sp. PCC 6303]
Length = 181
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++LVG + LA LGY + + +++ A + I +G D+
Sbjct: 4 LLKGLNLYLVGMMGAGKTTLGRLLAKDLGYGFVDSDDVITKAAGKNISQIFAEDGEDAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E DVL +++ R +AT G G + + W +L G VWL A E +E+
Sbjct: 64 QLESDVLGQIAAFTRLTIATGG---GIILKRENWSYLRQGLVVWLDVPVAELERRLREDT 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|300865613|ref|ZP_07110388.1| shikimate kinase [Oscillatoria sp. PCC 6506]
gi|300336397|emb|CBN55538.1| shikimate kinase [Oscillatoria sp. PCC 6506]
Length = 176
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M LL+G +++LVG V LA LGY T +++ A +I +G ++
Sbjct: 1 MDLLRGVNLYLVGMMGAGKTTVGRWLASELGYHFFDTDDVISKVANLSISEIFARDGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAK 299
E VL LS++ + +VAT G G R W +L+ G VWL E + + +
Sbjct: 61 FRQLESQVLGELSAYKKLIVATGG---GIVLRQMNWSYLHHGIVVWLDVPVEELCDRLRE 117
Query: 300 EEARRHVKDG-------------KLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ +R +++G + Y+ ADV V + ++ ++V + L+++++
Sbjct: 118 DNSRPLLREGEPRAILQNILNQRQRFYAQADVRVAV---GSETPEAVGMRVIEELQKVVK 174
Query: 347 SD 348
D
Sbjct: 175 KD 176
>gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424]
gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424]
Length = 184
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG SIFLVG V LA L Y + +++ QTI +G D
Sbjct: 4 LLKGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKKVTGQTIKEIFATQGEDFFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL L ++ R+V+AT GG G + W +L G +WL
Sbjct: 64 ELESQVLRELCAYTRSVIAT-GG--GIILKQINWSYLRHGLIIWL 105
>gi|427714678|ref|YP_007063302.1| shikimate kinase [Synechococcus sp. PCC 6312]
gi|427378807|gb|AFY62759.1| shikimate kinase [Synechococcus sp. PCC 6312]
Length = 188
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 19/179 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT+++L+G ELA LGY + T L+E A Q++ G +
Sbjct: 14 LNGTNLYLIGMMGSGKTTTGQELAAALGYRFMDTDRLIEQVAGQSVSEIFAQAGEATFRQ 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEEA 302
E VL +S + VVAT G G W +L+ G +WL + A +
Sbjct: 74 LETQVLAEVSCYHHLVVATGG---GIILEPMNWSYLHHGLVIWLKVSIPNLVNRLAGDTT 130
Query: 303 RRHVKDGKLG-------------YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSD 348
R + L Y+ AD+ + + D V+QA L+AL ++++ D
Sbjct: 131 RPLLAHAALAEKLTTLAQARNEFYAQADLTLTIA--DDLRPHQVSQAILTALPKILRDD 187
>gi|218245814|ref|YP_002371185.1| shikimate kinase [Cyanothece sp. PCC 8801]
gi|226729123|sp|B7JZT6.1|AROK_CYAP8 RecName: Full=Shikimate kinase; Short=SK
gi|218166292|gb|ACK65029.1| Shikimate kinase [Cyanothece sp. PCC 8801]
Length = 187
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 180 SMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD 239
+ +LL+G +I+L+G + LA L Y T L+E +Q+I+ + +G
Sbjct: 3 TQKLLQGINIYLIGMMGSGKSTIGKILAQRLDYRFFDTDILIERVTQQSINDIFVTQGET 62
Query: 240 SVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAK 299
+ E VL +++ R+V+AT GG G + W +L+ G +WL + + +
Sbjct: 63 VFRDIETQVLSEVAACTRSVIAT-GG--GIVLNSQNWSYLHHGLIIWLDVSIKLLKTRLI 119
Query: 300 EEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSAL 341
+ R + +D+ +KL+ D +A L+ +
Sbjct: 120 NDTTRPL------LKESDLTLKLKTLDEQRRNLYNKADLTIV 155
>gi|428319260|ref|YP_007117142.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
gi|428242940|gb|AFZ08726.1| shikimate kinase [Oscillatoria nigro-viridis PCC 7112]
Length = 183
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M L+G +I+LVG V LA L Y T EL+ Q+I EG ++
Sbjct: 1 MDGLRGVNIYLVGMMGAGKTTVGRILAKKLKYRFFDTDELIVRVTNQSIAEIFDREGEEA 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAK 299
E VL LS++ +VVAT G G R+ W +L+ G VWL + + +
Sbjct: 61 FRELETKVLGELSAYKNSVVATGG---GIVTRSMNWGYLHYGVVVWLDVPVDQLYDRLRS 117
Query: 300 EEARRHVKDGKLG-------------YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ AR +++G++ Y+ AD V++ + A+++A ++ ++++I+
Sbjct: 118 DTARPLLQEGEIKSKLQSLLNERERLYTQAD--VRVCAGVGERAEAMATRAIEEIQKVIK 175
Query: 347 SD 348
+
Sbjct: 176 PE 177
>gi|427724186|ref|YP_007071463.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
gi|427355906|gb|AFY38629.1| shikimate kinase [Leptolyngbya sp. PCC 7376]
Length = 186
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 9/140 (6%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +I+L+G +A +A + Y L + +++E A +I + G +
Sbjct: 4 LLKGLNIYLIGMMGTGKSTLAKIIAEIMNYRVLDSDDIIEQLAGTSISNIFAEMGEEEFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E VL ++ R VVAT GG G D W +L G T+WL + + + +
Sbjct: 64 KLETQVLGKIAVQTRTVVAT-GG--GIILSNDNWYYLQQGLTIWLDVPTPLLMDRLRSDT 120
Query: 303 RRHVKDGKLGYSNADVVVKL 322
RR + N D+ KL
Sbjct: 121 RRPL------LQNVDLETKL 134
>gi|17228739|ref|NP_485287.1| shikimate kinase [Nostoc sp. PCC 7120]
gi|60389805|sp|Q8YXG9.1|AROK_ANASP RecName: Full=Shikimate kinase; Short=SK
gi|17130591|dbj|BAB73201.1| shikimate kinase [Nostoc sp. PCC 7120]
Length = 181
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L T ++ K++I+ G
Sbjct: 4 LLQGVNLYLIGMMGAGKTTVGHLLAKELGYGFLDTDNVIAQATKKSINEIFAEAGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEE 301
E DVL + S+ + VAT G G R + W +L+ G +WL + + A +
Sbjct: 64 QIESDVLAQVCSYTKLTVATGG---GIVLRRENWSYLHHGLILWLDVPVDILYARLAADT 120
Query: 302 ARRHVKD----GKLG---------YSNADVVVKLQGWDADH--AKSVAQASLSALKQ 343
R ++D GKL YS AD+ + + + A V QA S LKQ
Sbjct: 121 TRPLLQDDDPKGKLRSLLEQRTPLYSQADLRICVNAEETPEQIANKVMQAIPSVLKQ 177
>gi|434396920|ref|YP_007130924.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
gi|428268017|gb|AFZ33958.1| shikimate kinase [Stanieria cyanosphaera PCC 7437]
Length = 182
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G SI+L+G + LA L Y T L+E +Q+I G D+
Sbjct: 7 QSLHGISIYLIGMMGVGKTTIGKLLAHQLNYRFFDTDVLIERVTQQSIPEIFAESGEDNF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKE 300
E VL+ +S ++V+AT GG G R W +L G +WL + E + + A++
Sbjct: 67 RELEHQVLQEISVETKSVIAT-GG--GIVERQINWSYLQQGLIIWLDVEVEVLKQRLAED 123
Query: 301 EAR 303
+ R
Sbjct: 124 QNR 126
>gi|219127919|ref|XP_002184173.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404404|gb|EEC44351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 277
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L G++++ VG V LA +G Y L T E++E TI AEG +
Sbjct: 84 LNGSNVYFVGIMGSGKSAVGDILARRMGTYNFLDTDEIIERATGMTIPEIFKAEGEEGFR 143
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS--------QTEAMD 294
E VL+S+ +VR +++T G G + + W L G VWL + E D
Sbjct: 144 TVEAQVLDSVHPYVRCIISTGG---GIVIKLENWSKLQTGLVVWLDCEPEVIMRRIEGTD 200
Query: 295 E-----NSAKEEARRHVKDGKLGYSNADVVVKL-QGWDADHAKSVAQASL 338
++ ++ + + + + YS AD+ +K+ + D +H +A L
Sbjct: 201 RPLLQTDNPLQKLKDLLAEREDKYSQADIRIKVTEDMDTEHVADLAIREL 250
>gi|126695461|ref|YP_001090347.1| shikimate kinase [Prochlorococcus marinus str. MIT 9301]
gi|126542504|gb|ABO16746.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9301]
Length = 185
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 7/135 (5%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ ++ +KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVHTIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
EG D+ E + L+ + + ++V + GG G +++ W L G W+ +
Sbjct: 63 NDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWID----L 115
Query: 294 DENSAKEEARRHVKD 308
D++ A E + +K+
Sbjct: 116 DKDIAIERLKNEIKN 130
>gi|397566788|gb|EJK45217.1| hypothetical protein THAOC_36180 [Thalassiosira oceanica]
Length = 278
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++L+G V LA +G Y L T +LE +I EG D+
Sbjct: 85 LRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFR 144
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL+S+ +HVR V+ T G G R W L G ++L
Sbjct: 145 DAEAQVLDSVHAHVRCVIGTGG---GLVTRNQNWAKLQTGLVLYL 186
>gi|397609609|gb|EJK60447.1| hypothetical protein THAOC_19201 [Thalassiosira oceanica]
Length = 282
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++L+G V LA +G Y L T +LE +I EG D+
Sbjct: 89 LRGCNLYLIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAVGMSIPEIFEKEGEDAFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL+S+ +HVR V+ T G G R W L G ++L
Sbjct: 149 DAEAQVLDSVHAHVRCVIGTGG---GLVTRNQNWAKLQTGLVLYL 190
>gi|148240549|ref|YP_001225936.1| shikimate kinase [Synechococcus sp. WH 7803]
gi|147849088|emb|CAK24639.1| Shikimate kinase [Synechococcus sp. WH 7803]
Length = 191
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 72/184 (39%), Gaps = 21/184 (11%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + ++E A TI EG
Sbjct: 10 QRLGGRNLYLVGMMGSGKTSTGRPLAQRLEYGFVDADAVIEQAAGCTIPDIFKREGESGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL--SQTEAMDENSAK 299
N E VL ++S VVAT G GA R + W ++ G +WL Q + +
Sbjct: 70 RNLETQVLSAISQRHSLVVATGG---GAVTRPENWGAMHQGIVIWLDVEQQRLLKRLESD 126
Query: 300 EEARR--HVKDGKLG-----------YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ R H +D L Y+ AD+ V + DA+ VA L L LIQ
Sbjct: 127 DTPRPLLHEQDPALALNTLLTARRPMYAEADLTVVI---DAEPPDEVADGILKLLPTLIQ 183
Query: 347 SDKK 350
K
Sbjct: 184 DPPK 187
>gi|443323785|ref|ZP_21052788.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
gi|442786571|gb|ELR96301.1| shikimate kinase [Gloeocapsa sp. PCC 73106]
Length = 183
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG +++LVG + LA L Y + +LE A+ I EG +
Sbjct: 8 LKGINVYLVGMMGTGKSTIGQILAHNLEYRFFDSDTVLERVAQANITEIFATEGEEVFRE 67
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEEA 302
E VL L ++ R+V+AT GG G + W +L+ G +WL + E + + A ++
Sbjct: 68 LETQVLSQLCAYTRSVIAT-GG--GVVLKPKNWSYLHHGLVIWLDAPVELLYQRLAIDQT 124
Query: 303 R 303
R
Sbjct: 125 R 125
>gi|224007048|ref|XP_002292484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972126|gb|EED90459.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 293
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLG-YTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L+G +++ +G V LA +G Y L T +LE A +I EG ++
Sbjct: 100 LQGCNLYFIGMMGSGKSAVGDALARRMGTYNFLDTDVILERAAGMSIPKIFQTEGEEAFR 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+S+ +HVR VV+T GG R W L G V+L
Sbjct: 160 EAEAQVLDSVHAHVRCVVSTGGGM---ILRNQNWSKLQTGLVVYL 201
>gi|145357115|ref|XP_001422768.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583011|gb|ABP01085.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 170
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L TS+FL+G V LA LGY L T EL+++ K+T S + AE +S
Sbjct: 5 LADTSLFLIGIMGSGKSTVGASLAKALGYNHLDTDELIKSVTKKT-PSELFAEAGESEFR 63
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E +L ++++ R V++T G G W HL+ G TV L ++ A
Sbjct: 64 AIESMILAEVAAYKRCVISTGG---GIVCEKTNWMHLHNGVTVRL-------HGDSELLA 113
Query: 303 RRHVKDG 309
RR + DG
Sbjct: 114 RRVLADG 120
>gi|254526222|ref|ZP_05138274.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
gi|221537646|gb|EEE40099.1| shikimate kinase [Prochlorococcus marinus str. MIT 9202]
Length = 185
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEA 292
EG D+ E + L+ + + ++V + GG G + + W L G W+ + +
Sbjct: 63 KDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKPENWGILRQGIIAWIDLEKDI 119
Query: 293 MDENSAKEEARRHVKDGK 310
E E A R + GK
Sbjct: 120 AIERLKNEIANRPLLQGK 137
>gi|443316765|ref|ZP_21046197.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
gi|442783620|gb|ELR93528.1| shikimate kinase [Leptolyngbya sp. PCC 6406]
Length = 221
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+ S++LVG + LA L Y T L+E A+++I G +
Sbjct: 34 LLRNVSLYLVGMMGAGKSTLGKRLAAVLKYRFFDTDTLIEQTAQRSIGDIFAEAGESTFR 93
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E V+ L+ + R VV+T GG R + W HL G VW+
Sbjct: 94 DLETAVIRELAPYTRIVVSTGGGM---VLRRENWGHLRQGVVVWV 135
>gi|157412463|ref|YP_001483329.1| shikimate kinase [Prochlorococcus marinus str. MIT 9215]
gi|157387038|gb|ABV49743.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9215]
Length = 185
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKIIKGRSIFLIGMMGSGKSQTGLKLAELLKYKYIDLDTLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
EG D+ E + L+ + + ++V + GG G +++ W L G W+
Sbjct: 63 KDEGEDNFRELEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWI 113
>gi|428218974|ref|YP_007103439.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
gi|427990756|gb|AFY71011.1| shikimate kinase [Pseudanabaena sp. PCC 7367]
Length = 196
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 175 SLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWML 234
SL + +L+G ++FL+G V A LGY + T + +E++A ++I
Sbjct: 2 SLKSKQTSMLQGVNLFLIGMMGAGKSTVGKLAAQRLGYHFIDTDDTIESYAGKSIPQIFA 61
Query: 235 AEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAM 293
G E +VL +S++ VVAT G G W HL++G WL E +
Sbjct: 62 DSGEAEFRQIEHNVLMQVSAYRNLVVATGG---GIVVDRQNWAHLHSGVVAWLDVPIEVL 118
Query: 294 DENSAKEEARR 304
+ K +R
Sbjct: 119 HQRLTKNNGKR 129
>gi|427704162|ref|YP_007047384.1| shikimate kinase [Cyanobium gracile PCC 6307]
gi|427347330|gb|AFY30043.1| shikimate kinase [Cyanobium gracile PCC 6307]
Length = 215
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +I+LVG V LA LGY + L A + I ++G D
Sbjct: 20 LDGLNIYLVGMMGAGKSAVGRPLAEALGYRFIDADTALGEVAGRPIAEIFASDGEDGFRT 79
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTE-------AMD-- 294
E VL ++S VVAT G GA R + W H+ G VWL A D
Sbjct: 80 LETAVLNGIASWHSLVVATGG---GAVIRPENWGHMRQGLVVWLDAPADELVRRLAADPT 136
Query: 295 --------ENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ +A+ EA H + + Y+ AD+ V QG +VA L AL +++
Sbjct: 137 PRPLLDAPDPAARLEALLHER--RPLYAQADLTVAQQG---GTPAAVALQVLEALPSVLR 191
Query: 347 SDKKLP 352
P
Sbjct: 192 DPTPPP 197
>gi|428211742|ref|YP_007084886.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
gi|428000123|gb|AFY80966.1| shikimate kinase [Oscillatoria acuminata PCC 6304]
Length = 182
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q LKG +++L+G VA LA L Y L + L+E A Q+I G +
Sbjct: 3 QFLKGCNLYLIGMMGSGKTTVAQILAPQLEYRYLDSDRLIEQVAGQSIPEIFAESGEAAF 62
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKE 300
E VL L ++ VVAT G G W +L G VWL E + + A +
Sbjct: 63 RELETKVLSELCAYTHLVVATGG---GIILNRQNWSYLQHGVVVWLDVPVEQLYQRLAGD 119
Query: 301 EARRHVKD 308
R ++D
Sbjct: 120 TTRPLLRD 127
>gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101]
gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101]
Length = 184
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 23/185 (12%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
+LL+G +++LVG V LA LGY+ L T L+ A ++I+ EG +
Sbjct: 7 KLLQGVNLYLVGMMGAGKTTVGHLLAQHLGYSFLDTDNLITQAAGKSINEIFATEGEAAF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-------------S 288
E ++L +SS+ +AT G G W +L G VWL
Sbjct: 67 RELETNILSEISSYKNLTIATGG---GIVISRFNWSYLRHGIVVWLDVPVEVLYSRLQGD 123
Query: 289 QTEAMDENS---AKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLI 345
QT + +NS A+ +A +++ + Y+ ADV V + D + V +L +K+++
Sbjct: 124 QTRPLIQNSNPLARLQAI--LEERRPFYNCADVHVNVDIQDT--PQQVTILTLEEIKKVL 179
Query: 346 QSDKK 350
+S ++
Sbjct: 180 KSSQR 184
>gi|428775242|ref|YP_007167029.1| shikimate kinase [Halothece sp. PCC 7418]
gi|428689521|gb|AFZ42815.1| shikimate kinase [Halothece sp. PCC 7418]
Length = 182
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V +A L Y T EL+ Q I G D
Sbjct: 9 LLQGLNLYLIGMMGVGKTAVGQAVAQQLTYRFFDTDELITRVQGQAITEIFAKAGEDYFR 68
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E VL+ LS++ R+V+AT GG G + W L G VWL + + + E A+++
Sbjct: 69 ELETKVLQELSAYARSVIAT-GG--GIILQNQNWSFLQQGLVVWLDADLDLIMERLAEDQ 125
Query: 302 AR 303
+R
Sbjct: 126 SR 127
>gi|428220177|ref|YP_007104347.1| shikimate kinase [Synechococcus sp. PCC 7502]
gi|427993517|gb|AFY72212.1| shikimate kinase [Synechococcus sp. PCC 7502]
Length = 184
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+L GT+I+L+G + LA L Y + T L+E K+T+ G
Sbjct: 1 MLDGTNIYLIGMMGAGKSTIGKLLADRLNYRFVDTDSLVEACTKRTVAQIFAESGESGFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S++ R VVAT G G W HL G VWL
Sbjct: 61 QIEHQVLSEVSAYTRLVVATGG---GIVLDRLNWSHLRNGLVVWL 102
>gi|428779039|ref|YP_007170825.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
gi|428693318|gb|AFZ49468.1| shikimate kinase [Dactylococcopsis salina PCC 8305]
Length = 186
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 4/126 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +I+LVG V E+A L Y T +L+ + I +G
Sbjct: 9 LLQGLNIYLVGLMGVGKTAVGKEIAQQLNYRFFDTDDLIIRVEGKAITDIFAQKGETYFR 68
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEE 301
E VL+ LS R+V+AT G G + + W L G VWL ++T+ + E A++
Sbjct: 69 ELETKVLQELSVCTRSVIATGG---GIIMKKENWSFLQQGLVVWLDAKTDLIMERLAEDN 125
Query: 302 ARRHVK 307
R +K
Sbjct: 126 TRPLLK 131
>gi|78778496|ref|YP_396608.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
gi|78711995|gb|ABB49172.1| shikimate kinase [Prochlorococcus marinus str. MIT 9312]
Length = 185
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ +++++KG SIFL+G + L+LA L Y + L+E AK++I+
Sbjct: 3 QSIIEKTVKVIKGRSIFLIGMMGCGKSQTGLKLAELLKYKYIDLDSLIEKLAKKSINQIF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
EG D+ E L+ + + ++V + GG G +++ W L G W+ +
Sbjct: 63 NDEGEDNFRELETSCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWID----L 115
Query: 294 DENSAKEEARRHVKD 308
D++ A E + +++
Sbjct: 116 DKDIAIERLKNEIEN 130
>gi|297605427|ref|NP_001057199.2| Os06g0225800 [Oryza sativa Japonica Group]
gi|75107689|sp|Q5NTH3.1|SK2_ORYSJ RecName: Full=Shikimate kinase 2, chloroplastic; Short=OsSK2;
Flags: Precursor
gi|56805579|dbj|BAD83413.1| shikimate kinase 2 [Oryza sativa Japonica Group]
gi|218197836|gb|EEC80263.1| hypothetical protein OsI_22231 [Oryza sativa Indica Group]
gi|255676848|dbj|BAF19113.2| Os06g0225800 [Oryza sativa Japonica Group]
Length = 307
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG VA LA LGY+ + +L+E + + E S++
Sbjct: 92 LNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFR 151
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 152 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 193
>gi|308811598|ref|XP_003083107.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
gi|116054985|emb|CAL57062.1| AROK_SYNY3 Shikimate kinase (ISS) [Ostreococcus tauri]
Length = 272
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 16/184 (8%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GTS+FL+G V LA +GY L T EL++ K+T G
Sbjct: 51 LVGTSVFLIGIMGTGKSTVGAALAKAMGYKHLDTDELIQGVTKKTPAELFAELGESEFRA 110
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEAMDENSAKEEA 302
E +L ++++ VV+T G G W HL+ G TV L + E + A
Sbjct: 111 IESLILAEVAAYKNCVVSTGG---GIVCERTNWMHLHNGVTVRLHGENELL--------A 159
Query: 303 RRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSDKKLPGKKSLYIRLG 362
+R + D G ++ G D ++ +A+ ++ +++L+++ + + + L + LG
Sbjct: 160 KRVLAD---GVEKRPLLASEGGESDDESEQMARV-VARIEKLLEARESMYKQADLTVPLG 215
Query: 363 CRGD 366
R D
Sbjct: 216 SRDD 219
>gi|222635237|gb|EEE65369.1| hypothetical protein OsJ_20662 [Oryza sativa Japonica Group]
Length = 272
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG VA LA LGY+ + +L+E + + E S++
Sbjct: 57 LNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKEHSEAFFR 116
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 117 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 158
>gi|318042493|ref|ZP_07974449.1| shikimate kinase [Synechococcus sp. CB0101]
Length = 207
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L+G +++LVG LA LGY L +E A ++I +EG
Sbjct: 10 QRLEGLNLYLVGMMGSGKSTAGRHLAELLGYRFLDADSSIEQVAGRSIPEVFASEGEAGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
E VL ++S VVAT G G R D W L+ G +WL E +
Sbjct: 70 RQLEAAVLNQIASWHSLVVATGG---GVVTRPDNWGQLHQGVVIWLDAPEEL 118
>gi|302770076|ref|XP_002968457.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
gi|300164101|gb|EFJ30711.1| hypothetical protein SELMODRAFT_169767 [Selaginella moellendorffii]
Length = 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS-DSVV 242
LKGT +FL+G V L+ LGY + +L+E A + + + + +
Sbjct: 95 LKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VVAT G GA R W ++ G TV+L
Sbjct: 155 DAESEVLSQLSGMYRLVVATGG---GAVVRPQNWGYMRHGITVYL 196
>gi|302774428|ref|XP_002970631.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
gi|300162147|gb|EFJ28761.1| hypothetical protein SELMODRAFT_147242 [Selaginella moellendorffii]
Length = 300
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGS-DSVV 242
LKGT +FL+G V L+ LGY + +L+E A + + + + +
Sbjct: 95 LKGTCLFLIGMMGSGKSTVGKHLSDALGYYFFDSDKLVEQAAGGASVAQIFKQSNEEGFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VVAT G GA R W ++ G TV+L
Sbjct: 155 DAESEVLSQLSGMYRLVVATGG---GAVVRPQNWGYMRHGITVYL 196
>gi|376003244|ref|ZP_09781058.1| shikimate kinase I [Arthrospira sp. PCC 8005]
gi|375328404|emb|CCE16811.1| shikimate kinase I [Arthrospira sp. PCC 8005]
Length = 194
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ A Q I +G +
Sbjct: 13 LEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAGQAIPEIFATQGEEE 72
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 73 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRTNWSYLRHGIIVWL 116
>gi|298490902|ref|YP_003721079.1| shikimate kinase ['Nostoc azollae' 0708]
gi|298232820|gb|ADI63956.1| Shikimate kinase ['Nostoc azollae' 0708]
Length = 181
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L G V LA LGY + T +++ A ++I+ EG +
Sbjct: 4 LLKGVNLYLTGMMGVGKTTVGHLLAHQLGYGFIDTDDVIVKAAGKSINEIFTEEGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E DVL + ++ + +AT G G R + W ++ G VWL + N E+
Sbjct: 64 QLESDVLGQVCAYTKLTIATGG---GIVLRRENWGYMRHGLIVWLDAPVQILLNRLGEDD 120
Query: 303 RR 304
R
Sbjct: 121 TR 122
>gi|123967661|ref|YP_001008519.1| shikimate kinase [Prochlorococcus marinus str. AS9601]
gi|123197771|gb|ABM69412.1| Shikimate kinase [Prochlorococcus marinus str. AS9601]
Length = 185
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFL+G K L+LA L Y + L+E AK++I+ EG +
Sbjct: 13 LKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRE 72
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E + L+ + + ++V + GG G +++ W L G W+ +D++ A E +
Sbjct: 73 LEANCLKE-TIKIPSLVISTGG--GIVTKSENWGILRQGIIAWID----LDKDIAIERLK 125
Query: 304 RHVKD 308
+++
Sbjct: 126 NEIEN 130
>gi|4417286|gb|AAD20411.1| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 292
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|282898123|ref|ZP_06306118.1| Shikimate kinase [Raphidiopsis brookii D9]
gi|281197267|gb|EFA72168.1| Shikimate kinase [Raphidiopsis brookii D9]
Length = 167
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q LKG +++L+G + LA + Y+ + T E++ A + I EG +
Sbjct: 7 QSLKGVNLYLIGMMGSGKTTIGSLLAQAVNYSFIDTDEVIVKAAGKPISDIFTTEGETAF 66
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEE 301
E +VL + ++ + +AT G G R + W +L+ G +WL + + KE+
Sbjct: 67 RQLESNVLAQVCAYTKLTIATGG---GIVLRRENWSYLHHGLIIWLDVSVEILLERLKED 123
Query: 302 ARR 304
R
Sbjct: 124 QTR 126
>gi|145329214|ref|NP_001077936.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252148|gb|AEC07242.1| Shikimate kinase [Arabidopsis thaliana]
Length = 276
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|39104605|dbj|BAC43483.2| putative shikimate kinase precursor [Arabidopsis thaliana]
Length = 303
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|145329216|ref|NP_001077937.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252149|gb|AEC07243.1| Shikimate kinase [Arabidopsis thaliana]
Length = 304
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 101 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 160
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 161 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 202
>gi|30681570|ref|NP_179785.2| Shikimate kinase [Arabidopsis thaliana]
gi|145329577|ref|NP_001077938.1| Shikimate kinase [Arabidopsis thaliana]
gi|145362131|ref|NP_973507.2| Shikimate kinase [Arabidopsis thaliana]
gi|209572588|sp|Q9SJ05.2|SK1_ARATH RecName: Full=Shikimate kinase 1, chloroplastic; Short=AtSK1;
Flags: Precursor
gi|330252146|gb|AEC07240.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252147|gb|AEC07241.1| Shikimate kinase [Arabidopsis thaliana]
gi|330252150|gb|AEC07244.1| Shikimate kinase [Arabidopsis thaliana]
Length = 303
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|189303601|gb|ACD85800.1| At2g21940 [Arabidopsis thaliana]
Length = 303
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V ++ LGYT L+E T + + ++
Sbjct: 100 LNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAEIFVHHGENFFR 159
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 160 GKETDALKKLSSRYQVVVSTGGG---AVIRPINWKYMHKGISIWL 201
>gi|88807136|ref|ZP_01122648.1| shikimate kinase [Synechococcus sp. WH 7805]
gi|88788350|gb|EAR19505.1| shikimate kinase [Synechococcus sp. WH 7805]
Length = 191
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 71/184 (38%), Gaps = 21/184 (11%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + ++E A TI +G
Sbjct: 10 QRLGGRNLYLVGMMGSGKTSTGRPLAQRLQYGFVDADAVIEQAAGCTIPEIFKRDGESGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-------------- 287
+ E VL ++S VVAT G GA R + W ++ G +WL
Sbjct: 70 RSLETQVLSAISQRHSLVVATGG---GAVTRPENWGAMHQGIVIWLDVERQQLLKRLEKD 126
Query: 288 -SQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
+ + E R + + YS AD+ V + DA+ +VA L+ L LIQ
Sbjct: 127 DTPRPLLQEQDPAMALDRLLMTRRPMYSEADLTVVI---DAEPPDAVADGILNLLPTLIQ 183
Query: 347 SDKK 350
K
Sbjct: 184 DPPK 187
>gi|209527294|ref|ZP_03275804.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|423066193|ref|ZP_17054983.1| shikimate kinase [Arthrospira platensis C1]
gi|209492282|gb|EDZ92627.1| Shikimate kinase [Arthrospira maxima CS-328]
gi|406712235|gb|EKD07424.1| shikimate kinase [Arthrospira platensis C1]
Length = 194
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ A Q I +G +
Sbjct: 13 LEQIQGINIYLIGMMGAGKSTVGQILANRLSYKFFDTDVLISQVAGQAIPEIFATQGEEE 72
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 73 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRMNWSYLRHGIIVWL 116
>gi|116787038|gb|ABK24350.1| unknown [Picea sitchensis]
Length = 318
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD-SVV 242
LKG I+LVG V L+ LGY + +L+E + + + E ++
Sbjct: 117 LKGKCIYLVGMMGSGKTTVGKILSEVLGYYFFDSDQLVEEASGGASVAQIFKERNEQGFR 176
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL+ LS+ R V+AT GG A R W ++ G TVWL
Sbjct: 177 DSESEVLKQLSTMYRLVIATGGG---AVVRPQNWNYMRQGITVWL 218
>gi|350538979|ref|NP_001234112.1| shikimate kinase, chloroplastic [Solanum lycopersicum]
gi|114200|sp|Q00497.1|AROK_SOLLC RecName: Full=Shikimate kinase, chloroplastic; Flags: Precursor
gi|19349|emb|CAA45121.1| shikimate kinase precursor [Solanum lycopersicum]
Length = 300
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 85/221 (38%), Gaps = 36/221 (16%)
Query: 168 DIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQ 227
D +E+ ++ + L G ++LVG V LA LGY+ L+E Q
Sbjct: 86 DEIETLKNKAEEVEEYLDGRCVYLVGMMGCGKTTVGRILAETLGYSFFDCDRLIE----Q 141
Query: 228 TIDSWMLAE-----GSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAG 282
+ +AE G + E +VL LS R VV+T GG A R W+H++ G
Sbjct: 142 AVGGITVAEIFELRGESFFRDNETEVLHKLSLMHRLVVSTGGG---AVVRPINWRHMHKG 198
Query: 283 FTVWLS----------QTEAMDENSAKEEARRHVKDGKL------------GYSNADVVV 320
+VWL TE E V D L Y+NA V
Sbjct: 199 ISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRGENYANASARV 258
Query: 321 KLQGWDADHAKSVAQASLS--ALKQLIQSDKKLPGKKSLYI 359
L+ K V + + L+ LIQ + L +KS+ +
Sbjct: 259 SLENIALKREKDVCHITPAEITLEVLIQIENFLKTQKSVVV 299
>gi|37522279|ref|NP_925656.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
gi|81709329|sp|Q7NH27.1|AROK_GLOVI RecName: Full=Shikimate kinase; Short=SK
gi|35213279|dbj|BAC90651.1| shikimate kinase [Gloeobacter violaceus PCC 7421]
Length = 177
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG S++LVG V LA LGY + L+E + + + EG
Sbjct: 1 MLKGVSLYLVGMMGSGKSTVGRLLAEKLGYGFVDLDALIEQVSGKRVGEIFEREGEAVFR 60
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL +S++ R VVAT GG AR + W +L+ G VWL
Sbjct: 61 DLESRVLAEVSAYTRLVVATGGGV--VLARRN-WGYLHHGVVVWL 102
>gi|186686317|ref|YP_001869513.1| shikimate kinase [Nostoc punctiforme PCC 73102]
gi|238691206|sp|B2IX35.1|AROK_NOSP7 RecName: Full=Shikimate kinase; Short=SK
gi|186468769|gb|ACC84570.1| shikimate kinase [Nostoc punctiforme PCC 73102]
Length = 181
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LL+G +++L+G V LA LGY L ++ ++I+ EG
Sbjct: 4 LLQGVNLYLIGMMGVGKTTVGPLLAKHLGYGFLDLDGVIAKATDKSINQLFAEEGEAGFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEE 301
E DVL + + + +AT G G R + W +L+ G VWL E + A++
Sbjct: 64 QIESDVLSQVCAFTKLTIATGG---GIVLRRENWGYLHHGLIVWLDVPVELIYRRLAEDT 120
Query: 302 ARRHVKD----GKLG---------YSNADVVVKLQ 323
R ++D GKL YS AD+ + +Q
Sbjct: 121 TRPLLQDADLKGKLRSLLEQRTPLYSQADLHITVQ 155
>gi|411118274|ref|ZP_11390655.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
gi|410711998|gb|EKQ69504.1| shikimate kinase [Oscillatoriales cyanobacterium JSC-12]
Length = 190
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 21/184 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +++L+G V +A LGY T ++E Q I + G
Sbjct: 9 LQGINLYLIGMMGAGKTTVGRLIAQALGYQFFDTDAVIEQVTGQPITALFTEMGEAGFRE 68
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEEA 302
E VL LS++ R +AT G G R + W +L G VWL E + + +
Sbjct: 69 LETRVLAELSTYTRLAIATGG---GIVLRHENWGYLRHGVIVWLDVPLEQLQQRLQSDTN 125
Query: 303 RRHVKDGKLG-------------YSNADVVVKLQGWDADHAKS-VAQASLSALKQLIQSD 348
R ++ G L Y+ ADV V G+ + VA+ L ++Q++ D
Sbjct: 126 RPLLQTGDLTTRLQTLLDQRRSLYAQADVHV---GYRVGETPTQVAEQVLIQVQQVLLPD 182
Query: 349 KKLP 352
P
Sbjct: 183 SAPP 186
>gi|255572361|ref|XP_002527119.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223533542|gb|EEF35282.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 282
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
LKG +FLVG V L+ LGYT + + E +E T ++ G D
Sbjct: 100 LKGCCVFLVGMMGSGKTTVGKILSEALGYTFVDSDEYVEQTAGGNSVSHIFQQYGEDYFR 159
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E + L+ LS R VVAT G G+ R W+++ G TV+L
Sbjct: 160 DIESEALQKLSIIPRQVVATGG---GSVVRPINWKYMRQGITVFL 201
>gi|33239580|ref|NP_874522.1| shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|81665111|sp|Q7VE85.1|AROK_PROMA RecName: Full=Shikimate kinase; Short=SK
gi|33237105|gb|AAP99174.1| Shikimate kinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 190
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG LA L Y+ + EL+E AK ++ EG + +
Sbjct: 14 LGGRIIYLVGMMGSGKSTTGPHLAKLLKYSFIDQDELIEKVAKSSVSQIFREEGENGFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ + VVAT G G R++ W L+ G +WL
Sbjct: 74 IETQVLKQIGQRHSLVVATGG---GLVTRSENWGVLHQGIVIWL 114
>gi|30692396|ref|NP_195664.2| shikimate kinase 2 [Arabidopsis thaliana]
gi|42573237|ref|NP_974715.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|75151384|sp|Q8GY88.1|SK2_ARATH RecName: Full=Shikimate kinase 2, chloroplastic; Short=AtSK2;
Flags: Precursor
gi|26450651|dbj|BAC42436.1| putative shikimate kinase [Arabidopsis thaliana]
gi|28950863|gb|AAO63355.1| At4g39540 [Arabidopsis thaliana]
gi|332661683|gb|AEE87083.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661684|gb|AEE87084.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 300
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V +A LGYT L+E K T + + +SV
Sbjct: 96 LNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFR 155
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ LS VV + GG GA R W++++ G ++WL
Sbjct: 156 EKETEALKKLSLMYHQVVVSTGG--GAVIRPINWKYMHKGISIWL 198
>gi|384247569|gb|EIE21055.1| shikimate kinase, partial [Coccomyxa subellipsoidea C-169]
Length = 178
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G+S++LVG V +A L Y + + +L+E A T+ A+G + +
Sbjct: 1 LDGSSLYLVGMMGSGKSTVGKMVAAALEYPYVDSDKLIEERAGCTVAQIFAAQGEQAFRD 60
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E VL+ L++ +AV+ + GG G R W+ + G +WL+ + A+
Sbjct: 61 LESSVLQELAAS-KAVMVSTGG--GVVTREQNWESMRHGLVIWLTGPPEL-------LAK 110
Query: 304 RHVKDG 309
R V DG
Sbjct: 111 RAVSDG 116
>gi|124024892|ref|YP_001014008.1| shikimate kinase [Prochlorococcus marinus str. NATL1A]
gi|123959960|gb|ABM74743.1| Shikimate kinase [Prochlorococcus marinus str. NATL1A]
Length = 198
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +IFL+G + LA + Y + T +++E +KQ+I S +G +
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ +S H V+AT G G + W L+ G +WL
Sbjct: 74 VEKKVLKEISQHHSLVIATGG---GLVTLPENWGILHQGIVIWL 114
>gi|72383312|ref|YP_292667.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
gi|115312159|sp|Q46HR4.1|AROK_PROMT RecName: Full=Shikimate kinase; Short=SK
gi|72003162|gb|AAZ58964.1| shikimate kinase [Prochlorococcus marinus str. NATL2A]
Length = 198
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +IFL+G + LA + Y + T +++E +KQ+I S +G +
Sbjct: 14 LGGRNIFLIGMMGSGKSQTGPVLAKMINYAFVDTDDVIEKASKQSISSIFEKDGEKVFRD 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL+ +S H V+AT G G + W L+ G +WL
Sbjct: 74 VEKKVLKEISQHHSLVIATGG---GLVTLPENWGILHQGIVIWL 114
>gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205]
Length = 207
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 74/186 (39%), Gaps = 21/186 (11%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L+G +++LVG V LA L Y L LE A ++I +EG
Sbjct: 10 QRLEGLNLYLVGMMGSGKSSVGRHLAEALDYRFLDADTSLEQVAGRSIPEIFASEGETGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA--------- 292
E VL ++S VVAT G G + W L+ G +WL +A
Sbjct: 70 RALESAVLNQIASWHSLVVATGG---GVVTQPANWGELHQGVVIWLDAPDAILLARLEAD 126
Query: 293 ------MDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
M+ E + + + Y+ AD+ + LQ D A+ V Q L AL +I+
Sbjct: 127 PTPRPLMEAEDRAERLASLMAERRPLYAQADLQI-LQ--DGRPAEQVVQQILEALPSIIK 183
Query: 347 SDKKLP 352
K P
Sbjct: 184 ERKAPP 189
>gi|159464345|ref|XP_001690402.1| shikimate kinase [Chlamydomonas reinhardtii]
gi|158279902|gb|EDP05661.1| shikimate kinase [Chlamydomonas reinhardtii]
Length = 327
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 36/200 (18%)
Query: 184 LKGTSI--FLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDS 240
L+G +I F VG V LA L Y T ++E K+ + EG D
Sbjct: 94 LRGCNIWLFQVGMMGSGKSTVGKMLANTLKYAFFDTDSVIELAHDKKPVSQIFAEEGQDY 153
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAK 299
E +++ LS + V++T GG A + W +++ G WL+ TE + AK
Sbjct: 154 FRQCESQIIKELSPYRNLVISTGGG---AVLKPQNWGYMHLGIVAWLNGDTELLARRVAK 210
Query: 300 EEARRH------------------------VKDGKLGYSNADVVVKLQGWDADHAKSVAQ 335
+ + ++D + Y NADVVV L+G+ D
Sbjct: 211 DGIEKRPLLAADAPEGADMQQVAKTKLDALLEDRRKYYENADVVVTLEGYGKDLEDGAPT 270
Query: 336 AS-----LSALKQLIQSDKK 350
A+ L+A+ +Q+ K+
Sbjct: 271 AAVMYRLLTAINDKVQAKKR 290
>gi|340707718|pdb|3NWJ|A Chain A, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
gi|340707719|pdb|3NWJ|B Chain B, Crystal Structure Of Shikimate Kinase From Arabidopsis
Thaliana (Atsk2)
Length = 250
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V +A LGYT L+E K T + + +SV
Sbjct: 46 LNGRSMYLVGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFR 105
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ LS VV + GG GA R W++++ G ++WL
Sbjct: 106 EKETEALKKLSLMYHQVVVSTGG--GAVIRPINWKYMHKGISIWL 148
>gi|434405733|ref|YP_007148618.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
gi|428259988|gb|AFZ25938.1| shikimate kinase [Cylindrospermum stagnale PCC 7417]
Length = 184
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G V LA LGY + T ++ A ++I+ +G +
Sbjct: 4 LLKGVNLYLIGMMGVGKTTVGRLLAQQLGYGFVDTDNVIVQAAGKSINELFADKGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL--------------S 288
E DVL + + + +AT G G + + W +L+ G VWL +
Sbjct: 64 QLESDVLAQVCAFTKLTIATGG---GIVLKRENWGYLHHGLIVWLDAPVELILARLAEDT 120
Query: 289 QTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQ 323
+ + +++ R ++ K YS AD+ + +Q
Sbjct: 121 TRPLLQDTDPQDKLRSLLEQRKPLYSQADLRITVQ 155
>gi|158337774|ref|YP_001518950.1| shikimate kinase [Acaryochloris marina MBIC11017]
gi|158308015|gb|ABW29632.1| shikimate kinase [Acaryochloris marina MBIC11017]
Length = 182
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG +++LVG LA LGY + T +L+ Q I G D
Sbjct: 4 LKGVNLYLVGMMGCGKSTTGRALAKQLGYGFVDTDDLITQLTGQAITDIFAESGEDHFRQ 63
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +++H VVAT G G W L G +WL
Sbjct: 64 VESKVLSEVAAHTNLVVATGG---GIVLDKKNWSFLQHGLVIWL 104
>gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39]
Length = 184
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ + Q I +G +
Sbjct: 3 LEQIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSGQAIPEIFSTQGEEE 62
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT G G + W +L G VWL
Sbjct: 63 FRNLESQVLSSLCAYQHLVVATGG---GVVIKRMNWSYLRHGIIVWL 106
>gi|443313787|ref|ZP_21043397.1| shikimate kinase [Synechocystis sp. PCC 7509]
gi|442776200|gb|ELR86483.1| shikimate kinase [Synechocystis sp. PCC 7509]
Length = 188
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + +A LGY + T ++E K +I G
Sbjct: 9 LLKGVNLYLIGMMGSGKTTIGSLIATELGYGFVDTDAVIEQVTKHSISQLFAEVGEAEFR 68
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL + ++ VV+T G G + W +L+ G VWL
Sbjct: 69 QIESQVLAEVCAYTNLVVSTGG---GIVTQQKNWSYLHYGLIVWL 110
>gi|124021918|ref|YP_001016225.1| shikimate kinase [Prochlorococcus marinus str. MIT 9303]
gi|254806780|sp|A2C650.1|AROK_PROM3 RecName: Full=Shikimate kinase; Short=SK
gi|123962204|gb|ABM76960.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9303]
Length = 192
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + T ++E A Q I EG +
Sbjct: 12 QRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFNEEGEEGF 71
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEE 301
E VL ++ VVAT GG ++ + W L+ G +WL N +EE
Sbjct: 72 RAMESQVLNAIGQRHSLVVATGGGM---VSKPENWGILHQGIVIWL--------NPGREE 120
Query: 302 ARRHV 306
R +
Sbjct: 121 LFRRL 125
>gi|297821397|ref|XP_002878581.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
gi|297324420|gb|EFH54840.1| hypothetical protein ARALYDRAFT_320039 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
L G S++LVG V ++ LGY+ L+E T + + ++
Sbjct: 101 FLNGRSMYLVGMMGSGKTTVGKLMSKVLGYSFFDCDSLIEQAMNGTSVAEIFVHHGENFF 160
Query: 243 NG-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
G E D L+ LSS + VV+T GG A R W++++ G ++WL
Sbjct: 161 RGKETDALKKLSSMYQVVVSTGGG---AVIRPINWKYMHKGISIWL 203
>gi|425472135|ref|ZP_18850986.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
gi|389881854|emb|CCI37641.1| Shikimate kinase [Microcystis aeruginosa PCC 9701]
Length = 190
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I + EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFVDEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|409989186|ref|ZP_11272878.1| shikimate kinase [Arthrospira platensis str. Paraca]
gi|409939933|gb|EKN80923.1| shikimate kinase [Arthrospira platensis str. Paraca]
Length = 204
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
++ ++G +I+L+G V LA L Y T L+ + Q I +G +
Sbjct: 23 LEQIQGINIYLIGMMGAGKSTVGEILANRLSYKFFDTDVLISQVSGQAIPEIFSTQGEEE 82
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E VL SL ++ VVAT GG G + W +L G VWL
Sbjct: 83 FRNLESQVLSSLCAYQHLVVAT-GG--GVVIKRMNWSYLRHGIIVWL 126
>gi|78183927|ref|YP_376362.1| shikimate kinase [Synechococcus sp. CC9902]
gi|124053405|sp|Q3B009.1|AROK_SYNS9 RecName: Full=Shikimate kinase; Short=SK
gi|78168221|gb|ABB25318.1| shikimate kinase [Synechococcus sp. CC9902]
Length = 191
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+L+G LA LGY + ++E A TI +G +
Sbjct: 12 LSGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVAGCTIPEIFERDGEAGFRS 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEA 292
E VL ++S VVAT G G + + W L++G VWL A
Sbjct: 72 IESQVLNAISQRHSLVVATGG---GVVTKPENWGQLHSGIVVWLDVNRA 117
>gi|33862436|ref|NP_893996.1| shikimate kinase [Prochlorococcus marinus str. MIT 9313]
gi|81578001|sp|Q7V904.1|AROK_PROMM RecName: Full=Shikimate kinase; Short=SK
gi|33640549|emb|CAE20338.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9313]
Length = 192
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G +++LVG LA L Y + T ++E A Q I EG
Sbjct: 12 QRLGGRNLYLVGMMASGKSSTGRPLAEQLSYGFVDTDAVIEQLAGQPIPKIFSEEGEAGF 71
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEE 301
E VL ++ VVAT G G ++ + W L+ G +WL N +EE
Sbjct: 72 RTMESQVLNAIGQRHSLVVATGG---GIVSKPENWGVLHQGIVIWL--------NPGREE 120
Query: 302 ARRHV 306
R +
Sbjct: 121 LLRRL 125
>gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843]
gi|238687539|sp|B0JFW8.1|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK
gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843]
Length = 190
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I + EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFVDEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG G + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIAT-GG--GMVLKPMNWSYLRHGLMIWL 110
>gi|414079234|ref|YP_007000658.1| shikimate kinase [Anabaena sp. 90]
gi|413972513|gb|AFW96601.1| shikimate kinase [Anabaena sp. 90]
Length = 178
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
+ +LKG +++L+G V LA +GY + T E++ A ++I+ G
Sbjct: 2 IDILKGVNLYLIGMMGVGKTTVGKLLAAEIGYRFVDTDEVIIKAAGKSINEIFAENGEAE 61
Query: 241 VVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL ++ + +++T G G + W +L+ G +WL
Sbjct: 62 FRQLESDVLAQACAYTKLIISTGG---GVPMQQQNWSYLHHGLIIWL 105
>gi|425452721|ref|ZP_18832536.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
gi|389765347|emb|CCI08717.1| Shikimate kinase [Microcystis aeruginosa PCC 7941]
Length = 190
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E VL LSS + V+AT GG + W +L G +WL + K++
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLDVPLEILVKRLKQDTS 126
Query: 304 RHVKDG-------------KLG-YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
R + + + G Y+ AD +++ +D D + + L+A+ +I+
Sbjct: 127 RPLLESTDLESKLELLLEQRRGLYAEAD--LRIVVYDLDRPTDIVEKILTAIPTVIK 181
>gi|116071455|ref|ZP_01468723.1| shikimate kinase [Synechococcus sp. BL107]
gi|116065078|gb|EAU70836.1| shikimate kinase [Synechococcus sp. BL107]
Length = 191
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+L+G LA LGY + ++E A TI +G +
Sbjct: 12 LGGRSIYLIGMMGSGKTSTGRPLAKRLGYGFVDADAVIEQVANCTIPEIFERDGEEGFRL 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G G + + W L++G VWL
Sbjct: 72 IESQVLNAISQRHSLVVATGG---GVVTKPENWGQLHSGIVVWL 112
>gi|374256057|gb|AEZ00890.1| putative shikimate kinase 1 protein, partial [Elaeis guineensis]
Length = 164
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V L+ LGY+ + + +L+E + + E S++
Sbjct: 17 LNGHCIYLVGMMGSGKTTVGKILSEVLGYSFIDSDKLVEQAVGVPSVAQIFKEYSEAFFR 76
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LS+ R VVAT GG A R W+++ G TVWL
Sbjct: 77 DNESKVLRDLSTMHRLVVATGGG---AVIRPVNWKYMKQGMTVWL 118
>gi|194476762|ref|YP_002048941.1| shikimate kinase [Paulinella chromatophora]
gi|171191769|gb|ACB42731.1| shikimate kinase [Paulinella chromatophora]
Length = 187
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G +I+LVG + LA L Y+ T ++LE Q I G +
Sbjct: 10 LQGLNIYLVGIMGSGKSTIGKPLATALNYSFADTDDVLENATGQNISDIFSVNGESHFRS 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +S + VVAT G G ++ W ++ G VWL
Sbjct: 70 LEHKVLSEISHYHSLVVATGG---GVVINSNNWGIMHQGIVVWL 110
>gi|440755112|ref|ZP_20934314.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
gi|440175318|gb|ELP54687.1| shikimate kinase family protein [Microcystis aeruginosa TAIHU98]
Length = 190
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 19/177 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEAR 303
E VL LSS + V+AT GG + W +L G +WL + K++
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWLDVPLEILVKRLKQDTS 126
Query: 304 RHVKDG-------------KLG-YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQ 346
R + + + G Y+ AD +++ +D D + + L+A+ +I+
Sbjct: 127 RPLLESTDLESKLELLLEQRRGLYAEAD--LRIVVYDLDRPADIVEKILTAIPTVIK 181
>gi|326533332|dbj|BAJ93638.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 304
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVV 242
L G I+LVG V LA LGY+ + +L+E ++ G
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHGEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAK 299
+ E VL LSS R VVAT G GA R W+++ G +VWL EA+ AK
Sbjct: 154 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKNMKKGLSVWLDVPLEALARRIAK 208
>gi|22298425|ref|NP_681672.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
gi|34222550|sp|Q8DKH7.1|AROK_THEEB RecName: Full=Shikimate kinase; Short=SK
gi|22294604|dbj|BAC08434.1| shikimate kinase [Thermosynechococcus elongatus BP-1]
Length = 183
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +I+LVG LA LGY+ + T ++ F ++ I EG +
Sbjct: 7 LGGANIYLVGMMGAGKTTTGRLLAQRLGYSFVDTDAVITAFRQRPIREIFAQEGEPAFRE 66
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL +SS+ VVAT GG G W +L+ G VWL
Sbjct: 67 LEQQVLAQVSSYHHLVVAT-GG--GIVLNPMNWSYLHHGIVVWL 107
>gi|297797940|ref|XP_002866854.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312690|gb|EFH43113.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG V +A LGYT L+E T + + +SV
Sbjct: 95 LNGRSMYLVGMMGSGKTTVGKIMARALGYTFFDCDTLIEQAMNGTSVAEIFEHFGESVFR 154
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L+ LS VV + GG GA R W++++ G ++WL
Sbjct: 155 EKETEALKKLSLMYNQVVVSTGG--GAVIRPINWKYMHKGISIWL 197
>gi|452822420|gb|EME29439.1| shikimate kinase [Galdieria sulphuraria]
Length = 173
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY+ L T +++E +K+ I + G + + E DVL + S+V VVAT G
Sbjct: 13 LARKLGYSFLDTVQIIERASKKEISEILKEYGEEKLREIESDVLNQVQSYVCCVVATEG- 71
Query: 266 QQGAAARADKWQHLYAGFTVWL 287
G + W L+ G V+L
Sbjct: 72 --GVVLKNSNWAVLHNGIVVFL 91
>gi|425438084|ref|ZP_18818493.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
gi|389676823|emb|CCH94217.1| Shikimate kinase [Microcystis aeruginosa PCC 9432]
Length = 190
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|425467327|ref|ZP_18846610.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
gi|389829918|emb|CCI28391.1| Shikimate kinase [Microcystis aeruginosa PCC 9809]
Length = 190
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|380505030|gb|AFD62803.1| shikimate kinase, partial [Ipomoea purpurea]
Length = 298
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V +A LGY L+E Q + +AE G
Sbjct: 103 LSGRCIYLVGMMGSGKTTVGRIIAEALGYAFFDCDTLIE----QAVGGTSVAEIFKLHGE 158
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS +R VV + GG GA R W++++ G +VWL
Sbjct: 159 GFFRDNETEVLRKLS-LMREVVVSTGG--GAVVRPINWRYMHKGISVWL 204
>gi|443653401|ref|ZP_21131078.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806]
gi|443334040|gb|ELS48570.1| shikimate kinase family protein [Microcystis aeruginosa DIANCHI905]
Length = 190
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWL 110
>gi|390440354|ref|ZP_10228690.1| Shikimate kinase [Microcystis sp. T1-4]
gi|389836236|emb|CCI32816.1| Shikimate kinase [Microcystis sp. T1-4]
Length = 190
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIRQIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|425459812|ref|ZP_18839298.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
gi|389827663|emb|CCI20915.1| Shikimate kinase [Microcystis aeruginosa PCC 9808]
Length = 190
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|425455716|ref|ZP_18835429.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
gi|389803372|emb|CCI17712.1| Shikimate kinase [Microcystis aeruginosa PCC 9807]
Length = 190
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWL 110
>gi|425442960|ref|ZP_18823194.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
gi|389715849|emb|CCH99842.1| Shikimate kinase [Microcystis aeruginosa PCC 9717]
Length = 190
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGAGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPMNWSYLRHGLMIWL 110
>gi|425444946|ref|ZP_18824986.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
gi|389735150|emb|CCI01281.1| Shikimate kinase [Microcystis aeruginosa PCC 9443]
Length = 190
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEGTFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLAELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWL 110
>gi|123965355|ref|YP_001010436.1| shikimate kinase [Prochlorococcus marinus str. MIT 9515]
gi|123199721|gb|ABM71329.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9515]
Length = 185
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ + +++KG SIFL+G + LA L Y + +L+E K+TI
Sbjct: 3 KSIIDKTNKIIKGRSIFLIGMMASGKSQTGPVLAKFLRYKYIDLDKLIEKIVKKTIIEMF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+G + E + L+ + + ++V + GG G A+ + W L G +W+
Sbjct: 63 HEDGEEKFRELETNCLKE-TIKIPSLVISTGG--GVIAKPENWGILRQGIIIWI 113
>gi|422302513|ref|ZP_16389875.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
gi|389788246|emb|CCI16208.1| Shikimate kinase [Microcystis aeruginosa PCC 9806]
Length = 190
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+G S+FL+G + L+ L Y T L+E A + I EG +
Sbjct: 10 LRGLSVFLLGMMGSGKSTLGELLSRRLQYRFFDTDILIERVAGKKIREIFADEGEATFRE 69
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL LSS + V+AT GG + W +L G +WL
Sbjct: 70 LETQVLVELSSLTKTVIATGGGM---VLKPINWSYLRHGLMIWL 110
>gi|334187330|ref|NP_001190969.1| shikimate kinase 2 [Arabidopsis thaliana]
gi|332661685|gb|AEE87085.1| shikimate kinase 2 [Arabidopsis thaliana]
Length = 308
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 148 IDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
DE+Q + LKK+ E+K L SM LL + +G V +A
Sbjct: 78 FDEEQQI--LKKKAEEVK--------PYLNGRSMYLLNSFLVNALGMMGSGKTTVGKIMA 127
Query: 208 VGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN-GECDVLESLSSHVRAVVATLGGQ 266
LGYT L+E K T + + +SV E + L+ LS VV + GG
Sbjct: 128 RSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTGG- 186
Query: 267 QGAAARADKWQHLYAGFTVWL 287
GA R W++++ G ++WL
Sbjct: 187 -GAVIRPINWKYMHKGISIWL 206
>gi|302769450|ref|XP_002968144.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
gi|300163788|gb|EFJ30398.1| hypothetical protein SELMODRAFT_409286 [Selaginella moellendorffii]
Length = 237
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT +FLVG VA +++ L Y + +L+E T+ D
Sbjct: 43 LSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAIGATVAKIFSDSSEDKFRA 102
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS VVAT G GA R + W++L G T++L
Sbjct: 103 AESEALNQLSETSNVVVATGG---GAVVRDENWRYLKQGITIYL 143
>gi|33860667|ref|NP_892228.1| shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33633609|emb|CAE18566.1| Shikimate kinase [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 185
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
+S+ + ++++G SI+L+G K LA L Y + +L+E AK+TI+
Sbjct: 3 KSIIEKTNKIIQGRSIYLIGMMASGKSKTGPVLAELLRYKYIDLDKLIENIAKKTINEMF 62
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL-SQTEA 292
+G + E + L+ + + +++ + GG G ++ + W L G +W+ ++ E
Sbjct: 63 QEDGEKAFRELETNCLKE-TIKIPSLIVSTGG--GIISKPENWGVLRQGIIIWIDTKQEI 119
Query: 293 MDENSAKEEARRHVKDG--------------KLGYSNADVVVKLQGWDADHA 330
E K+ R + G K YS AD+ V++ D +
Sbjct: 120 ALERLKKDIENRPLLQGEDLSDLYNQIFQSRKNLYSQADLRVEVNNEDVEEV 171
>gi|242077364|ref|XP_002448618.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
gi|241939801|gb|EES12946.1| hypothetical protein SORBIDRAFT_06g030260 [Sorghum bicolor]
Length = 300
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y ++ L++ K QD + L G ++LVG
Sbjct: 78 TGKVHYSTDEALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 119
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V LA LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 120 VGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVV 179
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 180 ATGGG---AVIRPINWSYMKKGLTVWL 203
>gi|348686287|gb|EGZ26102.1| hypothetical protein PHYSODRAFT_285146 [Phytophthora sojae]
Length = 162
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDK 138
+ Y ++DG + + L L + QS +D +D T LTV++ L+ +L+D+
Sbjct: 71 TNYAWADGKKRVSVYLTLPGIGAQSEEDTHIDWTATSLTVKIKNYEGKTRLLSVPKLYDE 130
Query: 139 IKPTETIWYIDEDQLVINLKKQDPELKW 166
I +T EDQLV+ L K E W
Sbjct: 131 ISDVKT--KRKEDQLVLQLVKAK-EFSW 155
>gi|357138119|ref|XP_003570645.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 305
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V LA LGY+ + +L+E + + S++
Sbjct: 95 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSFFDSDKLVEQSVGMPSVAQIFKVHSEAFFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAK 299
+ E VL LSS R VVAT G GA R W+++ G +VWL EA+ AK
Sbjct: 155 DNETSVLRDLSSMRRLVVATGG---GAVIRPVNWKNMKKGLSVWLDVPLEALARRIAK 209
>gi|414585207|tpg|DAA35778.1| TPA: shikimate kinase [Zea mays]
Length = 292
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 70 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 111
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 112 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 171
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 172 ATGGG---AVIRPINWSYMKKGLTVWL 195
>gi|195638244|gb|ACG38590.1| shikimate kinase [Zea mays]
Length = 293
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 71 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 112
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 113 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 172
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 173 ATGGG---AVIRPINWSYMKKGLTVWL 196
>gi|212275149|ref|NP_001130232.1| hypothetical protein [Zea mays]
gi|194688616|gb|ACF78392.1| unknown [Zea mays]
gi|223973151|gb|ACN30763.1| unknown [Zea mays]
gi|414585206|tpg|DAA35777.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 293
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
T + Y +D L++ K QD + L G ++LVG
Sbjct: 71 TGKVHYSADDALILQQKAQD------------------VLPYLDGRCVYLVGMMGSGKTT 112
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V L+ LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 113 VGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFRDNESEVLTDLSSMHRLVV 172
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G TVWL
Sbjct: 173 ATGGG---AVIRPINWSYMKKGLTVWL 196
>gi|125541140|gb|EAY87535.1| hypothetical protein OsI_08943 [Oryza sativa Indica Group]
Length = 401
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|224035559|gb|ACN36855.1| unknown [Zea mays]
Length = 247
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 33 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 92
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 93 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 134
>gi|116073893|ref|ZP_01471155.1| shikimate kinase [Synechococcus sp. RS9916]
gi|116069198|gb|EAU74950.1| shikimate kinase [Synechococcus sp. RS9916]
Length = 201
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++LVG LA LGY + ++E A + I +G D
Sbjct: 16 LGGRNLYLVGMMGSGKSSSGRPLAQQLGYGFVDADPVIEQVAGRPIPQIFSEDGEDGFRA 75
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 76 IEAQVLQAIGQRHSLVVATGG---GVVTKPENWGVLHQGIVIWLN 117
>gi|222623677|gb|EEE57809.1| hypothetical protein OsJ_08387 [Oryza sativa Japonica Group]
Length = 464
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|87301781|ref|ZP_01084615.1| shikimate kinase [Synechococcus sp. WH 5701]
gi|87283349|gb|EAQ75304.1| shikimate kinase [Synechococcus sp. WH 5701]
Length = 220
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 74/193 (38%), Gaps = 21/193 (10%)
Query: 175 SLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWML 234
S+T G L+G +I+LVG V LA LGY + +LE A +I
Sbjct: 10 SVTPGLPGSLEGLNIYLVGMMGAGKSSVGRPLAQALGYRFIDADSVLEQHAGCSIPELFE 69
Query: 235 AEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL------- 287
G E VL ++ VVAT G G +R W + G VWL
Sbjct: 70 QRGEAGFRELESAVLNRIACWHSLVVATGG---GVVSRPCNWGQMRQGLVVWLDADELLL 126
Query: 288 --------SQTEAMDENSAKEEARRHVKDGKLGYSNADVVVKLQGWDADHAKSVAQASLS 339
Q + + R+ + + + YS AD+ V D A +VA+ L
Sbjct: 127 LERLRADPGQRPLLATADPEARLRQLLSERRPLYSQADLRVP---QDGRPATAVAEQVLE 183
Query: 340 ALKQLIQSDKKLP 352
++ ++++ P
Sbjct: 184 SIPKVLRQRVAPP 196
>gi|226505012|ref|NP_001152400.1| shikimate kinase [Zea mays]
gi|195655879|gb|ACG47407.1| shikimate kinase [Zea mays]
Length = 307
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 93 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 152
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 153 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKKGLSVWL 194
>gi|449464238|ref|XP_004149836.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449522321|ref|XP_004168175.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 307
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 37/192 (19%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKGTSIFLVG ++ + K+ LA L Y + L+ + + + + +
Sbjct: 105 LKGTSIFLVGINSSIKTKLGKLLADVLRYYYFDSDSLVVEVSGGEAAAKLYKQSDEKGFQ 164
Query: 244 G-ECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEEA 302
E +VL+ LSS R VV GA + L G T+W+ M E+
Sbjct: 165 AFETEVLKQLSSMGRLVVC---AGNGAVQSSTNLALLRHGITLWIDLPLQMIAEEFAEDR 221
Query: 303 RRH------------------------VKDGKLGYSNADVVVKLQ------GWDADHAKS 332
+H VKD GY+ AD ++ LQ G+D +A +
Sbjct: 222 SQHPVFDISTSGSYSEVLGQITSLYQKVKD---GYATADALISLQKLASKLGYDDFNAVT 278
Query: 333 VAQASLSALKQL 344
++ ALK++
Sbjct: 279 TEDMAMEALKEI 290
>gi|226495257|ref|NP_001149678.1| shikimate kinase [Zea mays]
gi|194700058|gb|ACF84113.1| unknown [Zea mays]
gi|194700758|gb|ACF84463.1| unknown [Zea mays]
gi|195629356|gb|ACG36319.1| shikimate kinase [Zea mays]
gi|413924549|gb|AFW64481.1| Shikimate kinase [Zea mays]
Length = 303
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 89 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 149 DNESSVLRDLSSMRRLVVATGG---GAVIRPVNWKYMKKGLSVWL 190
>gi|302773918|ref|XP_002970376.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
gi|300161892|gb|EFJ28506.1| hypothetical protein SELMODRAFT_411357 [Selaginella moellendorffii]
Length = 237
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L GT +FLVG VA +++ L Y + +L+E T+ +
Sbjct: 43 LSGTCLFLVGMMGCGKSTVAKDISEALSYEFQDSDKLVEKAVGATVAKIFSDSSEEKFRA 102
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS VVAT G GA R + W++L G T++L
Sbjct: 103 AESEALNQLSETSNVVVATGG---GAVVRDENWRYLKQGITIYL 143
>gi|413938896|gb|AFW73447.1| shikimate kinase [Zea mays]
Length = 305
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 91 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 150
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 151 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 192
>gi|75107690|sp|Q5NTH4.1|SK1_ORYSJ RecName: Full=Shikimate kinase 1, chloroplastic; Short=OsSK1;
Flags: Precursor
gi|56805577|dbj|BAD83412.1| shikimate kinase 1 [Oryza sativa Japonica Group]
Length = 308
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 94 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 153
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 154 DNESSVLRDLSSMKRLVVATGG---GAVIRPVNWKYMKKGLSVWL 195
>gi|449461431|ref|XP_004148445.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
gi|449503057|ref|XP_004161818.1| PREDICTED: shikimate kinase, chloroplastic-like [Cucumis sativus]
Length = 302
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG V L+ LGY+ + L+E ++ G D
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLVEQDMGISVAEVFKVYGEDFFRE 163
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS + V++T G GA R+ W++++ G +VWL
Sbjct: 164 RETEALRKLSLMRQFVISTGG---GAVTRSINWKYMHKGISVWL 204
>gi|413938895|gb|AFW73446.1| hypothetical protein ZEAMMB73_578634 [Zea mays]
Length = 257
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V ++ LGY+ + +L+E + + S++
Sbjct: 91 LNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGMPSVAQIFKVHSEAFFR 150
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G +VWL
Sbjct: 151 DNESSVLRDLSSMRRLVVATGG---GAVIRPINWRYMKRGLSVWL 192
>gi|220908896|ref|YP_002484207.1| shikimate kinase [Cyanothece sp. PCC 7425]
gi|219865507|gb|ACL45846.1| Shikimate kinase [Cyanothece sp. PCC 7425]
Length = 169
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 18/156 (11%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY T L+E A ++ G E VL LS + V+AT G
Sbjct: 13 LAQSLGYRYFDTDTLIEQLAGCSVREIFARWGEPQFRQWETQVLAELSPYKNLVIATGG- 71
Query: 266 QQGAAARADKWQHLYAGFTVWLS-QTEAMDENSAKEEARRHVKDGKLG------------ 312
G W +L+ G VWL+ E + + + R + D L
Sbjct: 72 --GIVLNPINWSYLHHGLVVWLNVPLEELSQRLVGDRTRPLLADNPLERLQTLLDQRRPY 129
Query: 313 YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQSD 348
Y+ AD+ V+++ + A+ VA L L +++S+
Sbjct: 130 YAQADLQVQVR--SGESAEQVALRVLETLPTILKSN 163
>gi|427718276|ref|YP_007066270.1| shikimate kinase [Calothrix sp. PCC 7507]
gi|427350712|gb|AFY33436.1| shikimate kinase [Calothrix sp. PCC 7507]
Length = 176
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
LLKG +++L+G + LA L Y + T ++ A ++I+ G +
Sbjct: 4 LLKGVNLYLIGMMGTGKTTIGRLLAQQLSYGFVDTDSIVVQAAGKSINQIFAELGEAAFR 63
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E DVL + ++ + +AT G G + + W +L+ G VWL
Sbjct: 64 QLESDVLAQVCAYTKLTIATGG---GIILQRENWGYLHHGLIVWL 105
>gi|254430567|ref|ZP_05044270.1| shikimate kinase [Cyanobium sp. PCC 7001]
gi|197625020|gb|EDY37579.1| shikimate kinase [Cyanobium sp. PCC 7001]
Length = 191
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 206 LAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGG 265
LA LGY + +LE A + I +G E VLE +SS VVAT G
Sbjct: 5 LADALGYRFVDADTVLEQAAGRGIAEIFAEDGEAGFRELETAVLEQISSWHSLVVATGG- 63
Query: 266 QQGAAARADKWQHLYAGFTVWLSQTEAMDENSAKEE 301
G R W HL+ G VWL + N +++
Sbjct: 64 --GVVTRPRNWGHLHQGVVVWLDAPAELLLNRLRQD 97
>gi|30688547|ref|NP_189325.2| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510473|ref|NP_001118711.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|186510475|ref|NP_001118712.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|75274423|sp|Q9LW20.1|SKL1_ARATH RecName: Full=Probable inactive shikimate kinase like 1,
chloroplastic; Short=AtSKL1; Flags: Precursor
gi|9279680|dbj|BAB01237.1| unnamed protein product [Arabidopsis thaliana]
gi|45752658|gb|AAS76227.1| At3g26900 [Arabidopsis thaliana]
gi|46402442|gb|AAS92323.1| At3g26900 [Arabidopsis thaliana]
gi|227202866|dbj|BAH56906.1| AT3G26900 [Arabidopsis thaliana]
gi|332643714|gb|AEE77235.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643715|gb|AEE77236.1| shikimate kinase like 1 [Arabidopsis thaliana]
gi|332643716|gb|AEE77237.1| shikimate kinase like 1 [Arabidopsis thaliana]
Length = 280
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFLVG + + LA L Y + L+ A + + L E +
Sbjct: 87 LKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQ 146
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVW----LSQTEAMDENSA 298
E +VL+ LSS R VV GA L G ++W L T D++S
Sbjct: 147 ESETEVLKQLSSMGRLVVC---AGDGAVQSLRNLALLRHGISIWIDVPLDITAKGDDDSF 203
Query: 299 KEEARRHVKD--------GKLGYSNADVVVKLQ 323
E + D + GY ADV + L+
Sbjct: 204 HSEPSPELFDTLKASYEKSRKGYETADVSISLE 236
>gi|414585204|tpg|DAA35775.1| TPA: hypothetical protein ZEAMMB73_776202 [Zea mays]
Length = 216
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G ++LVG V L+ LGY+ + +L+E + + + S++
Sbjct: 18 LDGRCVYLVGMMGSGKTTVGKILSEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSETFFR 77
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LSS R VVAT GG A R W ++ G TVWL
Sbjct: 78 DNESEVLTDLSSMHRLVVATGGG---AVIRPINWSYMKKGLTVWL 119
>gi|316995679|emb|CBY85385.1| shikimate kinase [Cucumis sativus]
Length = 302
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G I+LVG V L+ LGY+ + L+E ++ G D
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKVLSNALGYSFSDSDSLVEQDMGISVAEVFKVYGEDFFRE 163
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E + L LS + V++T G GA R+ W++++ G +VWL
Sbjct: 164 RETEALGKLSLMRQFVISTGG---GAVTRSINWKYMHKGISVWL 204
>gi|363807180|ref|NP_001242093.1| uncharacterized protein LOC100807736 [Glycine max]
gi|255642221|gb|ACU21375.1| unknown [Glycine max]
Length = 253
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET-FAKQTIDSWMLAEGSDSVV 242
L G I+LVG V ++ LGY+ + L+E ++ G
Sbjct: 96 LNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVVDIFEQHGETFFR 155
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E +VL LS R V++T GG A R W++++ G +VWL
Sbjct: 156 NKETEVLHKLSLLHRLVISTGGG---AVMRPINWKYMHKGVSVWL 197
>gi|357166256|ref|XP_003580651.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 298
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
TE + Y ++ L++ K +D + L ++LVG
Sbjct: 76 TEKVHYSADEALILKQKAED------------------VLPCLNDRCVYLVGMMGSGKTT 117
Query: 202 VALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV-NGECDVLESLSSHVRAVV 260
V +A LGY+ + +L+E + + + S++ + E +VL LSS R VV
Sbjct: 118 VGKIIAEVLGYSFFDSDKLVEQAVGISSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLVV 177
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT G GA R W ++ G T+WL
Sbjct: 178 ATGG---GAVIRPINWSYMRKGLTIWL 201
>gi|388514859|gb|AFK45491.1| unknown [Lotus japonicus]
Length = 299
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET-FAKQTIDSWMLAEGSDSVV 242
L G I+LVG V L+ L Y+ + L+E K ++ G
Sbjct: 103 LNGRCIYLVGMMGSGKTTVGKILSEVLSYSFFDSDALIEEEVDKTSVADIFKNYGEAFFR 162
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E ++L+ LS R V++T GG A + W++++ G +VWL
Sbjct: 163 NKETEILKKLSMMRRDVISTGGG---AVVKPTNWKYMHKGISVWL 204
>gi|326530582|dbj|BAJ97717.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 301
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Query: 142 TETIWYIDEDQLVINLKKQDPELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEK 201
TE + Y ++ LV+ K +D + L ++LVG
Sbjct: 79 TEKVHYSADEALVLKQKAED------------------VLPYLNDRCVYLVGMMGSGKTT 120
Query: 202 VALELAVGLGYTPLSTKELLE-TFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVV 260
V +A LGY+ + +L+E + ++ + E +VL LSS R +V
Sbjct: 121 VGKIIAEVLGYSFFDSDKLVEQSVGIPSVAEIFQVHSEAFFRDNESEVLRDLSSMHRLIV 180
Query: 261 ATLGGQQGAAARADKWQHLYAGFTVWL 287
AT GG A R W ++ G T+WL
Sbjct: 181 ATGGG---AVIRPINWSYMRKGLTIWL 204
>gi|255583009|ref|XP_002532273.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
gi|223528033|gb|EEF30113.1| Shikimate kinase, chloroplast precursor, putative [Ricinus
communis]
Length = 313
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ LGY+ L+E Q +D +AE G
Sbjct: 104 LSGRCIYLVGMMGSGKTTVGKVLSQVLGYSFCDCDSLIE----QDVDGTSVAEIFKLYGE 159
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +VL++LS + VV+T GG A R W+++ G +VWL
Sbjct: 160 GFFRMKETEVLKNLSMMHQIVVSTGGG---AVIRPINWEYMQKGISVWL 205
>gi|260435091|ref|ZP_05789061.1| shikimate kinase [Synechococcus sp. WH 8109]
gi|260412965|gb|EEX06261.1| shikimate kinase [Synechococcus sp. WH 8109]
Length = 191
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G SI+LVG LA LGY + ++E A +I +G +
Sbjct: 12 LAGRSIYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAAGCSIPEIFDRDGEAGFRS 71
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G G + + W L++G +WL
Sbjct: 72 LESQVLSAISQRHSLVVATGG---GVVTQPENWGMLHSGIVIWL 112
>gi|76782196|gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
Length = 302
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ L Y + L+E Q +D+ +AE G
Sbjct: 103 LSGRCIYLVGMMGSGKTTVGKVLSQVLSYAFFDSDTLVE----QDVDANSVAEIFNLYGE 158
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LS R VV+T GG A R W+++ G +VWL
Sbjct: 159 GFFRDKETEVLRKLSLMHRLVVSTGGG---AVVRPINWKYMQKGISVWL 204
>gi|148241390|ref|YP_001226547.1| shikimate kinase [Synechococcus sp. RCC307]
gi|254806784|sp|A5GQN5.1|AROK_SYNR3 RecName: Full=Shikimate kinase; Short=SK
gi|147849700|emb|CAK27194.1| Shikimate kinase [Synechococcus sp. RCC307]
Length = 195
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 21/179 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L+GT+++LVG V LA LGY L ++ A +I +G +
Sbjct: 14 LQGTNLYLVGMMGSGKSTVGPLLAKALGYRFLDADAVISQAAGCSIPEIFERDGEEGFRQ 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL--SQTEAMDENSAKEE 301
E VL+ LS VVAT GG A W L G +WL ++ E M A
Sbjct: 74 LERQVLQQLSQWHSLVVATGGGIVTVPA---NWGELRQGVVIWLDVAEEELMRRLQADPG 130
Query: 302 ARRHVKD----GKLG---------YSNADVVVKLQGWDADHAKSVAQASLSALKQLIQS 347
R + G+L Y AD+ V QG + A +++ L L L+++
Sbjct: 131 GRPLLAGDDPAGRLHGLLEKRQPLYGQADLRVSAQG---EGASDISERILQQLPGLLKA 186
>gi|301112194|ref|XP_002905176.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095506|gb|EEY53558.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 163
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 79 SQYEFSDGSAEIELRLQLGSLEIQSSKDIFVDADGTCLTVRVNRSGSFITLIETNQLFDK 138
+ Y ++DG + + L+L + + +D +D T LTV++ L+ ++L+D+
Sbjct: 72 TNYAWADGKKRVSMYLKLPGIGAYNEEDTHIDWTATSLTVKIKNYEGKTRLLVMSKLYDE 131
Query: 139 IKPTETIWYIDEDQLVINLKKQDPELKW 166
I +T EDQLV+ L K E W
Sbjct: 132 ISDIKTK--RKEDQLVLQLVKA-KEFSW 156
>gi|352096131|ref|ZP_08957078.1| Shikimate kinase [Synechococcus sp. WH 8016]
gi|351677487|gb|EHA60636.1| Shikimate kinase [Synechococcus sp. WH 8016]
Length = 204
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++L+G LA LGY + ++E A + I EG
Sbjct: 16 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEALAGRPIPQIFETEGEPGFRA 75
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 76 LESQVLQAIGERHSLVVATGG---GVITQPENWGVLHQGIVIWLA 117
>gi|224096310|ref|XP_002310602.1| shikimate kinase [Populus trichocarpa]
gi|222853505|gb|EEE91052.1| shikimate kinase [Populus trichocarpa]
Length = 294
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAE-----GS 238
L G I+LVG V L+ + Y+ +L+E Q + +AE G
Sbjct: 104 LNGRCIYLVGMMGSGKTTVGKILSRSIRYSFCDCDKLVE----QDVGVPSVAEIFEIYGE 159
Query: 239 DSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
D + E + LE LS R VV+T GG A R + W ++ G +VWL
Sbjct: 160 DFFRDKETEALEKLSIEHRFVVSTGGG---AVIRDENWIYMRKGISVWL 205
>gi|384246912|gb|EIE20400.1| SKI-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 235
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Query: 174 ESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWM 233
++L A M+LL+GTS++LVG V LA L Y L L+E A ++
Sbjct: 26 KALAAEVMELLEGTSLYLVGMMGSGKSTVGKILASALKYPYLDCDTLIEKMAGCSVAEIF 85
Query: 234 LAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLSQTEAM 293
EG +S E VL L VV+T G W ++ G +WL+ +
Sbjct: 86 SEEGEESFRELESQVLHELMPFKAVVVST---GGGVVVSKQNWGYMQHGVVIWLTGPPEL 142
Query: 294 DENSAKEEARRHVKDG 309
+RR ++DG
Sbjct: 143 -------LSRRALRDG 151
>gi|356525535|ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
Length = 295
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLET-FAKQTIDSWMLAEGSDSVV 242
L G I+LVG V ++ LGY+ + L+E ++ G
Sbjct: 95 LNGRCIYLVGMMGSGKTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFR 154
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
N E +VL LS + V++T GG A R W++++ G +VWL
Sbjct: 155 NKETEVLHKLSLMHQLVISTGGG---AVTRPINWKYMHKGVSVWL 196
>gi|255543635|ref|XP_002512880.1| protein with unknown function [Ricinus communis]
gi|223547891|gb|EEF49383.1| protein with unknown function [Ricinus communis]
Length = 292
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 73/188 (38%), Gaps = 36/188 (19%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSD-SVV 242
LKGTSIFLVG + + + LA L Y + L+E A + E +
Sbjct: 97 LKGTSIFLVGMRSSMKTSLGKLLADSLRYYYFDSDSLVEEVASGASAAKSFKETDEKGFR 156
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS-----QTEAMDENS 297
E +VL+ LSS R VV GA L G ++W+ +AM E S
Sbjct: 157 ESETEVLKQLSSMGRLVVC---AGDGAVQSFTNLALLRHGISLWIDVPLDMVAQAMSEES 213
Query: 298 ---------------AKEEARRHVKDGKLGYSNADVVVKLQ------GWDADHAKSVAQA 336
A EA R GY+ AD + LQ G+DA + +
Sbjct: 214 DQLSGADSEELTELIATFEAMRG------GYATADATISLQKVAVNLGYDALDSVTAEDM 267
Query: 337 SLSALKQL 344
+L LK++
Sbjct: 268 TLEVLKEI 275
>gi|78213853|ref|YP_382632.1| shikimate kinase [Synechococcus sp. CC9605]
gi|124053406|sp|Q3AH55.1|AROK_SYNSC RecName: Full=Shikimate kinase; Short=SK
gi|78198312|gb|ABB36077.1| Shikimate kinase [Synechococcus sp. CC9605]
Length = 199
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G S++LVG LA LGY + ++E A +I +G +
Sbjct: 20 LSGRSLYLVGMMGSGKTSTGRPLAERLGYGFVDADAVIEQAAGCSIPEIFERDGDAGFRS 79
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++S VVAT G G + + W L++G +WL
Sbjct: 80 LESQVLSAISQRHSLVVATGG---GVVTQPENWGLLHSGIVIWL 120
>gi|113955447|ref|YP_731746.1| shikimate kinase [Synechococcus sp. CC9311]
gi|113882798|gb|ABI47756.1| shikimate kinase [Synechococcus sp. CC9311]
Length = 212
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++L+G LA LGY + ++E A + I +G
Sbjct: 24 LGGRNLYLIGMMGSGKSSTGRPLAQRLGYGFVDADGVVEALAGRPIPQIFETDGEQGFRT 83
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWLS 288
E VL+++ VVAT G G + + W L+ G +WL+
Sbjct: 84 LESQVLQAIGQRHSLVVATGG---GVITQPENWGVLHQGIVIWLA 125
>gi|297603441|ref|NP_001054037.2| Os04g0640600 [Oryza sativa Japonica Group]
gi|75140480|sp|Q7X7H9.2|SK3_ORYSJ RecName: Full=Shikimate kinase 3, chloroplastic; Short=OsSK3;
Flags: Precursor
gi|38344899|emb|CAE02970.2| OSJNBb0079B02.2 [Oryza sativa Japonica Group]
gi|56805581|dbj|BAD83414.1| shikimate kinase 3 [Oryza sativa Japonica Group]
gi|116310881|emb|CAH67822.1| OSIGBa0138H21-OSIGBa0138E01.13 [Oryza sativa Indica Group]
gi|222629650|gb|EEE61782.1| hypothetical protein OsJ_16353 [Oryza sativa Japonica Group]
gi|255675822|dbj|BAF15951.2| Os04g0640600 [Oryza sativa Japonica Group]
Length = 287
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L I+LVG V LA LGY+ + +L+E + + + S++
Sbjct: 89 LNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGISSVAEIFQLHSEAFFR 148
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E +VL LSS R VVAT G GA R W ++ G T+WL
Sbjct: 149 DNESEVLRDLSSMHRLVVATGG---GAVIRPINWSYMKKGSTIWL 190
>gi|159902664|ref|YP_001550008.1| shikimate kinase [Prochlorococcus marinus str. MIT 9211]
gi|254806781|sp|A9BCW6.1|AROK_PROM4 RecName: Full=Shikimate kinase; Short=SK
gi|159887840|gb|ABX08054.1| Shikimate kinase [Prochlorococcus marinus str. MIT 9211]
Length = 197
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
L G +++LVG + LA L Y + +++E Q+I EG
Sbjct: 14 LGGRNLYLVGMMGSGKSRTGPVLAKKLSYGFVDVDDVIEKVTNQSISEIFDQEGEIGFRE 73
Query: 244 GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E +L+ + VVAT G G R + W L+ G +W+
Sbjct: 74 IETQILQEIGQRHSLVVATGG---GIVTRPENWGILHQGVVIWI 114
>gi|434387800|ref|YP_007098411.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
gi|428018790|gb|AFY94884.1| shikimate kinase [Chamaesiphon minutus PCC 6605]
Length = 202
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 30/127 (23%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGY-----------------------TPLSTKEL 220
L+G +I+L+G VA LA LGY T LS EL
Sbjct: 4 LQGLNIYLIGMMGCGKSTVAPLLADRLGYNFLDTDITLAKSCAKPLGYDFEDTDLSESEL 63
Query: 221 LETFAKQTIDSWMLAEGSDSVVNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLY 280
+ ++ + G E VL +S++ R VVAT GG G A + W HL+
Sbjct: 64 IAKIIRELFQTV----GEPEFRAIETQVLAEVSAYTRLVVAT-GG--GIAIERENWNHLH 116
Query: 281 AGFTVWL 287
G +WL
Sbjct: 117 QGLVIWL 123
>gi|357124743|ref|XP_003564057.1| PREDICTED: shikimate kinase, chloroplastic-like [Brachypodium
distachyon]
Length = 302
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV- 242
L G I+LVG V LA LGY+ + L+E + + S++
Sbjct: 99 LNGRCIYLVGMMGSGKSTVGKILAEVLGYSYFDSDSLVEQAVGMPSVAQIFKVHSEAFFR 158
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
+ E VL LSS R VVAT G GA R W+++ G ++ L
Sbjct: 159 DNESSVLRDLSSMQRLVVATGG---GAVIRPVNWRYMKKGLSIML 200
>gi|428226691|ref|YP_007110788.1| shikimate kinase [Geitlerinema sp. PCC 7407]
gi|427986592|gb|AFY67736.1| shikimate kinase [Geitlerinema sp. PCC 7407]
Length = 194
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 183 LLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVV 242
+LKG +++L+G V LA LGY T L+E Q++ G
Sbjct: 6 ILKGVNLYLIGMMGAGKSTVGRLLASRLGYHFFDTDALIEQATGQSVRQIFAESGEAIFR 65
Query: 243 NGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL L + +++T G G W +L G VWL
Sbjct: 66 QLESQVLAQLCAQKNLLISTGG---GIVTTPFNWSYLRHGVVVWL 107
>gi|297818234|ref|XP_002877000.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297322838|gb|EFH53259.1| shikimate kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 58/153 (37%), Gaps = 16/153 (10%)
Query: 184 LKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSVVN 243
LKG SIFLVG + + LA L Y + L+ A + + L E +
Sbjct: 87 LKGASIFLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQ 146
Query: 244 -GECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVW----LSQTEAMDENSA 298
E +VL+ LSS R VV GA L G ++W L D++S
Sbjct: 147 ESETEVLKQLSSMGRLVVC---AGDGAVQSLTNLALLRHGISIWIDVPLDIAAKGDDDSF 203
Query: 299 KEEARRHVKD--------GKLGYSNADVVVKLQ 323
E + D + GY AD + L+
Sbjct: 204 NSEPSPELFDTLKASYEKSRKGYETADASISLE 236
>gi|33866734|ref|NP_898293.1| shikimate kinase [Synechococcus sp. WH 8102]
gi|81573829|sp|Q7U469.1|AROK_SYNPX RecName: Full=Shikimate kinase; Short=SK
gi|33639335|emb|CAE08717.1| Shikimate kinase [Synechococcus sp. WH 8102]
Length = 191
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 182 QLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDSV 241
Q L G S++LVG LA LGY + ++E A +I +G
Sbjct: 10 QRLGGRSLYLVGMMGSGKTSTGRPLAEQLGYGFVDADAVIEQAAGCSIPEIFERDGEAGF 69
Query: 242 VNGECDVLESLSSHVRAVVATLGGQQGAAARADKWQHLYAGFTVWL 287
E VL ++ VVAT G G + + W L++G VWL
Sbjct: 70 RALESQVLNAIGQRHSLVVATGG---GVVTQQENWGLLHSGIVVWL 112
>gi|423089795|ref|ZP_17078144.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
gi|357557696|gb|EHJ39227.1| putative cell wall binding repeat 2 [Clostridium difficile
70-100-2010]
Length = 634
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W LTA +++L+ G I +VG S V ++ +LA
Sbjct: 481 ELKAPIIVNGWNDLTADAIKLMDGKEIGIVGGSNNVPSQIENQLA 525
>gi|434383184|ref|YP_006704967.1| shikimate kinase [Brachyspira pilosicoli WesB]
gi|404431833|emb|CCG57879.1| shikimate kinase [Brachyspira pilosicoli WesB]
Length = 174
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 181 MQLLKGTSIFLVGDSTEVNEKVALELAVGLGYTPLSTKELLETFAKQTIDSWMLAEGSDS 240
M LK T IF++G ++ LA + YT +++E+ K+TI+ G +
Sbjct: 2 MNDLKNT-IFVIGLPGSGKSDLSKLLAEYINYTFFDMDKVIESREKKTINKIFEDRGEEY 60
Query: 241 VVNGECDVLESLSSHVRAVVATLGG 265
E DVLE LS+ AVV+T GG
Sbjct: 61 FREVESDVLEELSNIKNAVVSTGGG 85
>gi|91079410|ref|XP_967066.1| PREDICTED: similar to NudC domain containing 1 [Tribolium
castaneum]
gi|270003473|gb|EEZ99920.1| hypothetical protein TcasGA2_TC002712 [Tribolium castaneum]
Length = 566
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 132 TNQLFDKIKPTETIWYIDEDQLVINLKKQDPELKWPDIVE 171
T +L+ +I P T W I+ LV+ L+K + L WP+IVE
Sbjct: 311 TGKLYHQIDPDVTCWTIESSTLVLTLQKCESGLMWPEIVE 350
>gi|255101961|ref|ZP_05330938.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-63q42]
gi|255307829|ref|ZP_05352000.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile ATCC 43255]
Length = 623
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|126700407|ref|YP_001089304.1| cell wall binding protein [Clostridium difficile 630]
gi|115251844|emb|CAJ69679.1| Cell wall binding protein [Clostridium difficile 630]
Length = 623
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|423081111|ref|ZP_17069723.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
gi|423085017|ref|ZP_17073475.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357550872|gb|EHJ32677.1| putative cell wall binding repeat 2 [Clostridium difficile
050-P50-2011]
gi|357551420|gb|EHJ33210.1| putative cell wall binding repeat 2 [Clostridium difficile
002-P50-2011]
Length = 623
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255656776|ref|ZP_05402185.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-23m63]
Length = 623
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
>gi|255093771|ref|ZP_05323249.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CIP 107932]
gi|255651301|ref|ZP_05398203.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-37x79]
Length = 614
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 461 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 505
>gi|254976385|ref|ZP_05272857.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-66c26]
gi|255315522|ref|ZP_05357105.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-76w55]
gi|255518185|ref|ZP_05385861.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-97b34]
gi|260684366|ref|YP_003215651.1| S-layer protein [Clostridium difficile CD196]
gi|260688025|ref|YP_003219159.1| S-layer protein [Clostridium difficile R20291]
gi|306521135|ref|ZP_07407482.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile QCD-32g58]
gi|384362009|ref|YP_006199861.1| S-layer protein [Clostridium difficile BI1]
gi|260210529|emb|CBA65047.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile CD196]
gi|260214042|emb|CBE06195.1| cell surface protein (putative S-layer protein precursor)
[Clostridium difficile R20291]
Length = 623
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 163 ELKWPDIVESWESLTAGSMQLLKGTSIFLVGDSTEVNEKVALELA 207
ELK P IV W L+A +++L+ G I +VG S V+ ++ +LA
Sbjct: 470 ELKAPIIVNGWNDLSADAIKLMDGKEIGIVGGSNNVSSQIENQLA 514
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,860,981,003
Number of Sequences: 23463169
Number of extensions: 227530066
Number of successful extensions: 481483
Number of sequences better than 100.0: 254
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 481204
Number of HSP's gapped (non-prelim): 260
length of query: 388
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 244
effective length of database: 8,980,499,031
effective search space: 2191241763564
effective search space used: 2191241763564
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)