Query 016487
Match_columns 388
No_of_seqs 173 out of 816
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:17:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016487.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016487hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.9E-64 4.2E-69 515.9 25.3 361 1-385 80-459 (464)
2 PF03016 Exostosin: Exostosin 100.0 4.7E-50 1E-54 388.0 18.7 260 44-334 29-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.8 1E-19 2.2E-24 181.5 16.9 276 57-382 219-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.0 4.3E-09 9.3E-14 105.8 13.8 244 57-347 127-383 (691)
5 PF00852 Glyco_transf_10: Glyc 96.2 0.0086 1.9E-07 59.7 5.9 116 200-335 172-296 (349)
6 cd03814 GT1_like_2 This family 96.0 0.057 1.2E-06 51.9 10.6 93 253-354 257-351 (364)
7 cd03822 GT1_ecORF704_like This 95.8 0.12 2.6E-06 49.7 11.9 92 254-355 259-354 (366)
8 cd03794 GT1_wbuB_like This fam 95.6 0.1 2.2E-06 50.1 10.6 93 254-355 286-386 (394)
9 cd03808 GT1_cap1E_like This fa 95.4 0.16 3.4E-06 48.2 10.9 92 253-353 254-348 (359)
10 PF00534 Glycos_transf_1: Glyc 95.2 0.12 2.6E-06 45.0 8.7 86 253-347 83-170 (172)
11 cd03801 GT1_YqgM_like This fam 94.9 0.22 4.9E-06 47.0 10.3 93 253-354 266-361 (374)
12 cd03809 GT1_mtfB_like This fam 94.3 0.57 1.2E-05 45.0 11.8 93 253-356 263-357 (365)
13 cd04962 GT1_like_5 This family 94.2 0.55 1.2E-05 45.8 11.5 92 254-354 262-356 (371)
14 cd03820 GT1_amsD_like This fam 94.1 0.49 1.1E-05 44.5 10.8 94 254-355 244-339 (348)
15 cd03819 GT1_WavL_like This fam 94.1 0.46 1E-05 45.9 10.7 94 253-355 254-352 (355)
16 cd03821 GT1_Bme6_like This fam 94.1 0.33 7.2E-06 46.4 9.5 92 254-356 273-367 (375)
17 cd03800 GT1_Sucrose_synthase T 94.0 0.51 1.1E-05 46.4 11.0 94 254-356 294-390 (398)
18 TIGR03088 stp2 sugar transfera 93.8 0.51 1.1E-05 46.5 10.6 91 254-355 264-359 (374)
19 cd03807 GT1_WbnK_like This fam 93.6 0.52 1.1E-05 44.8 9.9 92 254-356 260-354 (365)
20 TIGR03449 mycothiol_MshA UDP-N 93.4 0.68 1.5E-05 46.2 10.8 95 254-357 294-390 (405)
21 cd03818 GT1_ExpC_like This fam 93.2 0.76 1.6E-05 46.0 10.8 94 253-355 291-387 (396)
22 cd04951 GT1_WbdM_like This fam 93.2 0.62 1.4E-05 44.9 9.9 91 254-355 254-347 (360)
23 PLN02871 UDP-sulfoquinovose:DA 93.2 0.17 3.6E-06 52.2 6.1 96 254-358 323-423 (465)
24 cd05844 GT1_like_7 Glycosyltra 93.0 1 2.2E-05 43.8 11.2 94 254-356 256-358 (367)
25 cd03798 GT1_wlbH_like This fam 92.9 0.68 1.5E-05 43.9 9.5 42 254-296 270-311 (377)
26 PRK09814 beta-1,6-galactofuran 92.8 0.2 4.2E-06 49.4 5.7 89 254-354 218-317 (333)
27 TIGR02149 glgA_Coryne glycogen 92.5 0.88 1.9E-05 44.9 10.0 94 253-355 271-373 (388)
28 cd04949 GT1_gtfA_like This fam 92.3 0.79 1.7E-05 45.1 9.4 94 254-355 270-365 (372)
29 cd03806 GT1_ALG11_like This fa 92.0 1.5 3.3E-05 44.6 11.1 97 253-356 315-414 (419)
30 cd03823 GT1_ExpE7_like This fa 91.1 0.58 1.2E-05 44.7 6.7 86 254-348 254-342 (359)
31 PRK15427 colanic acid biosynth 91.0 2.4 5.1E-05 43.0 11.3 89 254-354 290-391 (406)
32 PRK15484 lipopolysaccharide 1, 89.9 6 0.00013 39.5 13.0 95 254-357 268-366 (380)
33 PF13524 Glyco_trans_1_2: Glyc 89.9 0.51 1.1E-05 36.9 4.2 81 266-355 2-83 (92)
34 cd03817 GT1_UGDG_like This fam 89.6 7.4 0.00016 37.0 13.0 91 253-352 269-360 (374)
35 cd03792 GT1_Trehalose_phosphor 89.5 4.5 9.7E-05 40.0 11.7 93 253-356 264-359 (372)
36 cd03825 GT1_wcfI_like This fam 88.5 16 0.00035 35.0 14.7 88 253-349 255-344 (365)
37 cd04955 GT1_like_6 This family 88.0 4.2 9.2E-05 39.2 10.2 41 254-295 259-300 (363)
38 cd03799 GT1_amsK_like This is 87.2 8.9 0.00019 36.7 11.9 94 253-355 246-348 (355)
39 TIGR02095 glgA glycogen/starch 87.1 5.3 0.00012 41.1 10.8 90 254-356 357-460 (473)
40 PRK00654 glgA glycogen synthas 87.1 6.5 0.00014 40.5 11.5 83 256-346 350-442 (466)
41 PRK09922 UDP-D-galactose:(gluc 87.1 4 8.6E-05 40.2 9.5 39 255-294 250-288 (359)
42 cd03811 GT1_WabH_like This fam 86.9 8.1 0.00018 36.1 11.2 82 254-344 255-341 (353)
43 cd03804 GT1_wbaZ_like This fam 86.3 0.82 1.8E-05 44.6 4.1 41 253-295 252-292 (351)
44 cd03813 GT1_like_3 This family 86.2 6.9 0.00015 40.4 11.1 88 253-348 361-455 (475)
45 PRK14098 glycogen synthase; Pr 86.1 7.8 0.00017 40.4 11.4 42 254-295 373-414 (489)
46 cd03802 GT1_AviGT4_like This f 86.0 2 4.3E-05 41.1 6.5 42 254-296 235-277 (335)
47 cd03805 GT1_ALG2_like This fam 84.7 2.1 4.6E-05 42.2 6.2 93 254-356 291-386 (392)
48 cd03795 GT1_like_4 This family 83.6 11 0.00025 36.0 10.7 93 254-355 255-353 (357)
49 cd03796 GT1_PIG-A_like This fa 82.5 9 0.0002 38.3 9.8 42 253-295 260-301 (398)
50 cd03816 GT1_ALG1_like This fam 81.0 10 0.00022 38.4 9.7 90 253-350 305-399 (415)
51 smart00672 CAP10 Putative lipo 80.3 31 0.00067 32.9 12.0 141 197-352 78-231 (256)
52 TIGR02472 sucr_P_syn_N sucrose 80.1 3.4 7.4E-05 42.2 5.8 93 255-356 329-428 (439)
53 cd03791 GT1_Glycogen_synthase_ 78.4 20 0.00042 36.7 10.9 82 255-347 363-457 (476)
54 PHA01630 putative group 1 glyc 78.2 4.2 9.2E-05 40.1 5.6 41 254-295 201-241 (331)
55 cd04946 GT1_AmsK_like This fam 77.2 6.8 0.00015 39.6 7.0 91 254-354 300-397 (407)
56 cd03793 GT1_Glycogen_synthase_ 76.4 2.6 5.6E-05 44.8 3.6 115 254-375 466-589 (590)
57 TIGR03087 stp1 sugar transfera 76.2 5.6 0.00012 39.8 6.0 90 255-356 290-384 (397)
58 PRK14099 glycogen synthase; Pr 76.1 7.6 0.00017 40.5 7.1 91 254-357 360-467 (485)
59 KOG2619 Fucosyltransferase [Ca 75.3 16 0.00036 36.7 8.8 125 200-340 194-322 (372)
60 TIGR02918 accessory Sec system 75.3 30 0.00066 36.2 11.3 95 255-354 385-485 (500)
61 PRK10307 putative glycosyl tra 72.6 5.2 0.00011 40.1 4.8 94 253-357 294-396 (412)
62 PF05686 Glyco_transf_90: Glyc 70.6 46 0.00099 33.8 11.0 141 198-350 153-298 (395)
63 PLN02949 transferase, transfer 70.5 54 0.0012 34.0 11.7 94 254-355 346-443 (463)
64 cd03812 GT1_CapH_like This fam 67.9 45 0.00098 31.9 10.1 42 253-295 257-298 (358)
65 PRK13608 diacylglycerol glucos 67.9 47 0.001 33.3 10.4 86 254-351 265-354 (391)
66 PHA01633 putative glycosyl tra 66.6 7.3 0.00016 38.7 4.2 41 254-295 215-255 (335)
67 cd01635 Glycosyltransferase_GT 62.2 50 0.0011 28.8 8.5 41 254-295 173-213 (229)
68 COG1819 Glycosyl transferases, 62.2 1.2E+02 0.0025 30.9 12.1 134 199-347 234-379 (406)
69 PLN02939 transferase, transfer 61.0 20 0.00044 40.4 6.7 92 257-358 851-956 (977)
70 PRK00726 murG undecaprenyldiph 60.8 52 0.0011 32.1 9.1 89 254-348 244-337 (357)
71 PLN02605 monogalactosyldiacylg 59.9 38 0.00083 33.7 8.0 84 255-349 275-362 (382)
72 TIGR02468 sucrsPsyn_pln sucros 57.6 19 0.00042 41.1 5.8 92 255-356 560-658 (1050)
73 PRK15490 Vi polysaccharide bio 53.7 42 0.00091 35.9 7.2 41 254-295 464-504 (578)
74 PRK05749 3-deoxy-D-manno-octul 53.2 39 0.00084 34.1 6.9 105 254-380 311-420 (425)
75 PF13692 Glyco_trans_1_4: Glyc 51.4 17 0.00036 29.9 3.2 41 254-295 62-103 (135)
76 PF00919 UPF0004: Uncharacteri 50.5 14 0.0003 29.8 2.5 34 47-81 9-43 (98)
77 PF06258 Mito_fiss_Elm1: Mitoc 50.0 1.2E+02 0.0026 29.7 9.5 99 191-293 135-255 (311)
78 PHA03392 egt ecdysteroid UDP-g 46.7 67 0.0015 33.7 7.6 141 203-352 298-445 (507)
79 PLN02316 synthase/transferase 46.3 40 0.00086 38.6 6.0 38 258-295 915-952 (1036)
80 PLN00142 sucrose synthase 46.2 43 0.00093 37.3 6.2 91 257-358 660-760 (815)
81 TIGR02400 trehalose_OtsA alpha 39.7 79 0.0017 32.8 6.7 83 253-348 346-436 (456)
82 COG0707 MurG UDP-N-acetylgluco 38.8 1.3E+02 0.0029 30.1 8.0 105 254-379 244-353 (357)
83 cd03788 GT1_TPS Trehalose-6-Ph 37.7 37 0.0008 35.1 3.9 88 253-351 351-444 (460)
84 KOG1387 Glycosyltransferase [C 37.7 3.2E+02 0.0069 27.6 10.0 94 254-353 348-443 (465)
85 COG0757 AroQ 3-dehydroquinate 37.0 58 0.0012 28.2 4.2 27 266-292 71-97 (146)
86 PLN02275 transferase, transfer 36.1 1.2E+02 0.0025 30.1 7.1 75 203-295 261-341 (371)
87 PRK00025 lpxB lipid-A-disaccha 35.3 1.2E+02 0.0026 29.8 7.1 35 255-295 254-288 (380)
88 PRK10125 putative glycosyl tra 35.1 1.2E+02 0.0027 30.6 7.2 65 253-329 297-363 (405)
89 TIGR02470 sucr_synth sucrose s 33.1 86 0.0019 34.9 5.9 85 264-359 645-738 (784)
90 KOG3185 Translation initiation 31.8 34 0.00075 31.1 2.2 32 262-293 20-51 (245)
91 TIGR00215 lpxB lipid-A-disacch 29.9 56 0.0012 32.8 3.7 92 255-353 260-369 (385)
92 TIGR03590 PseG pseudaminic aci 27.0 1.2E+02 0.0026 28.9 5.3 35 253-293 232-266 (279)
93 COG0438 RfaG Glycosyltransfera 26.7 72 0.0016 29.1 3.6 41 254-295 268-308 (381)
94 PRK15179 Vi polysaccharide bio 25.4 2.4E+02 0.0052 31.0 7.7 40 255-295 584-623 (694)
95 cd01611 GABARAP Ubiquitin doma 24.2 76 0.0016 26.3 2.8 38 286-332 23-61 (112)
96 PF10550 Toxin_36: Conantokin- 22.8 96 0.0021 16.0 1.9 13 336-348 2-14 (15)
97 cd04950 GT1_like_1 Glycosyltra 22.6 78 0.0017 31.3 3.1 40 254-294 265-309 (373)
98 TIGR00236 wecB UDP-N-acetylglu 22.0 7.3E+02 0.016 24.1 11.5 36 253-294 265-300 (365)
99 cd03785 GT1_MurG MurG is an N- 20.4 2.4E+02 0.0053 27.0 6.1 88 254-348 244-337 (350)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.9e-64 Score=515.87 Aligned_cols=361 Identities=30% Similarity=0.536 Sum_probs=314.9
Q ss_pred CchhchHHHhhcCCCCC-CCCC---CCccccCCCCCCcccccCC----CCCCccccCCCcchhHHHHHHhc--cCCCCCC
Q 016487 1 MPSEFNLGLVKNCHHLN-MHRD---MCPHVANHGLGQPLQHVNA----VSPACWFATNQFTAAMIFHARLE--NHPLRTW 70 (388)
Q Consensus 1 lp~~fn~~ll~~c~~~~-~~~~---~c~~~~n~g~g~~~~~~~~----~~~~~w~~t~~y~~E~~fh~~l~--~s~~rT~ 70 (388)
||+.||.+|+..|.... .|.+ +|.+..|.++|+....... ...++|+.++||++|.+||++++ .++|||.
T Consensus 80 ~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~ 159 (464)
T KOG1021|consen 80 LPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTL 159 (464)
T ss_pred cchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecC
Confidence 68999999999998764 5666 9999999999987765432 12679999999999999999994 7899999
Q ss_pred CCCCCcEEEEcccccccccccccCC----ChhHHHHHHHHHHHHHhcChhhhccCCCCEEEEccCccccccccCCCCCCC
Q 016487 71 DPSRATLFYVPFYGGLHASSKFRET----NLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDFMRTKSGPDYG 146 (388)
Q Consensus 71 dP~eAdlFfVP~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~l~~~p~W~R~~GrDH~~v~~~~~w~~~r~~~~~~wg 146 (388)
||++||+||||||++++..++.+.+ +...++.++..++.|++++|||+|++|+|||||++|+.|++.+. .+|
T Consensus 160 dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~---~~~- 235 (464)
T KOG1021|consen 160 DPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRR---SDW- 235 (464)
T ss_pred ChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeec---cch-
Confidence 9999999999999999987775433 33456788899999999999999999999999999999988765 367
Q ss_pred CcccccccccccceeeehccCCCCCCceecCCCCCCCCCCCcchhhhhcccCCCCCCceEEeecCCCCCCCchHHHHHHH
Q 016487 147 ASTLLNLPRVQNLSVLAIERNPWRTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAPRKGSQRAAIRYELI 226 (388)
Q Consensus 147 g~~~~~~~~~~n~t~l~ie~~~~~~~dv~iP~~~~f~p~~~~~~~~w~~~~~~~~R~~L~~F~G~~~~~~~~~~iR~~L~ 226 (388)
++.+..++++.|.+.+..+..+|. +|++|||++.+||....+. .|+..++..+|++|++|+|+.. ++.+|+.|+
T Consensus 236 ~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~~----~~~iR~~L~ 309 (464)
T KOG1021|consen 236 GASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAPA----GGQIRSILL 309 (464)
T ss_pred hhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEecccc----CCcHHHHHH
Confidence 677777889999888888888776 9999999999999988777 8998888899999999999962 578999999
Q ss_pred HHHcc-CCceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCcccccccccc
Q 016487 227 KQCGE-SIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYL 305 (388)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~l 305 (388)
++|++ .+.+..++|..|. ..|.++..|.+.|++|+|||||+||+++|+|+||||.+|||||||+|. .||+|+.
T Consensus 310 ~~~~~~~~~~~~~~~~~g~---~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~~lpf~~ 383 (464)
T KOG1021|consen 310 DLWKKDPDTEVFVNCPRGK---VSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---IQLPFGD 383 (464)
T ss_pred HHhhcCcCccccccCCCCc---cccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---cccCcCC
Confidence 99999 3446778887764 358889999999999999999999999999999999999999999999 5888999
Q ss_pred CCCCCceEEEEeCCCCCccchH-HHHHcCCCHHHHHHHHHHHhh-hcCceEecC--CCCCCCCCcccHHHHHHHHHHHHH
Q 016487 306 PQDAEEYSVYINGENGNATRRI-EDELMKIPRERVERMRKKVID-LIPRVTYKH--PNASDDGEFEDAVDVAVAALANHV 381 (388)
Q Consensus 306 Pidw~~fsV~i~~~~~~~~~~l-~~~L~~i~~~~~~~mr~~l~~-~~~~~~y~~--~~~~~~~~~~DAf~~~~~~l~~r~ 381 (388)
|+||++|||+|++ ++++ ++ .++|.+|+.+++.+||+++.+ +.++|.+.. +... +|||++++++|++|+
T Consensus 384 ~~d~~~fSV~v~~-~~v~--~~~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~-----~da~~~~~~~v~~r~ 455 (464)
T KOG1021|consen 384 VLDWTEFSVFVPE-KDVP--ELIKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKR-----GDAFHMILHSLWRRL 455 (464)
T ss_pred CccceEEEEEEEH-HHhh--hHHHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCc-----chhHHHHHhhhhhcc
Confidence 9999999999997 5888 55 999999999999999999995 888888888 4443 799999999999988
Q ss_pred hhhh
Q 016487 382 QSVL 385 (388)
Q Consensus 382 ~~~~ 385 (388)
..++
T Consensus 456 ~~~~ 459 (464)
T KOG1021|consen 456 HKLR 459 (464)
T ss_pred cccc
Confidence 8654
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=4.7e-50 Score=388.02 Aligned_cols=260 Identities=30% Similarity=0.515 Sum_probs=199.2
Q ss_pred CccccCCCcchhHHHHHHhccCCCCCCCCCCCcEEEEcccccccccccccCC-ChhHHHHHHHHHHHHHhcChhhhccCC
Q 016487 44 ACWFATNQFTAAMIFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRET-NLTARDELAVRFSEFLESQPWWQRNNG 122 (388)
Q Consensus 44 ~~w~~t~~y~~E~~fh~~l~~s~~rT~dP~eAdlFfVP~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~p~W~R~~G 122 (388)
..|+.++||++|.+||++|++|+++|.||+|||+||||++.++......... .......+...+..+++++|||||++|
T Consensus 29 ~~~~~~~~~~~e~~l~~~l~~s~~~T~dp~eAdlF~vP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G 108 (302)
T PF03016_consen 29 CSWYETSQYALEVILHEALLNSPFRTDDPEEADLFFVPFYSSCYFHHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGG 108 (302)
T ss_pred CCCcccccchHHHHHHHHHHhCCcEeCCHHHCeEEEEEcccccccccccCCccchhhHHHHHHHHHHHHhcCchhhccCC
Confidence 5788899999999999999999999999999999999999998641111111 122455667777888888999999999
Q ss_pred CCEEEEccCccccccccCCCCCCCCcccccccccccceeeeh-------ccCCCCCCceecCCCCCCCCCCCcchhhhhc
Q 016487 123 KDHFVVLGRTAWDFMRTKSGPDYGASTLLNLPRVQNLSVLAI-------ERNPWRTNQHGIPYPSYFHPCTSSQVLTWQH 195 (388)
Q Consensus 123 rDH~~v~~~~~w~~~r~~~~~~wgg~~~~~~~~~~n~t~l~i-------e~~~~~~~dv~iP~~~~f~p~~~~~~~~w~~ 195 (388)
+||||+.++ +||++.....+.+.++++.++ ......++||++|+....++.... ..+ .
T Consensus 109 ~dH~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~P~~~~~~~~~~~--~~~-~ 173 (302)
T PF03016_consen 109 RDHFFVNSH------------DRGGCSFDRNPRLMNNSIRAVVAFSSFSSSCFRPGFDIVIPPFVPPSSLPDW--RPW-P 173 (302)
T ss_pred CCeEEEecc------------ccccccccccHhhhccchhheeccCCCCcCcccCCCCeeccccccccccCCc--ccc-c
Confidence 999999965 343444444445555555544 122346899999985433221111 111 2
Q ss_pred ccCCCCCCceEEeecCCCCCC--CchHHHHHHHHHHccCCceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecCCCC
Q 016487 196 SMRLSKRPHLFSFVGAPRKGS--QRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDS 273 (388)
Q Consensus 196 ~~~~~~R~~L~~F~G~~~~~~--~~~~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~Gd~ 273 (388)
.....+|++|++|+|+..... +++.+|+.|++.|++.++..+.... ..+..+.+|.+.|++|+|||+|+|++
T Consensus 174 ~~~~~~R~~l~~f~g~~~~~~~~~~~~~r~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~S~FCL~p~G~~ 247 (302)
T PF03016_consen 174 QRPPARRPYLLFFAGTIRPSSNDYSGGVRQRLLDECKSDPDFRCSDGS------ETCPSPSEYMELLRNSKFCLCPRGDG 247 (302)
T ss_pred cCCccCCceEEEEeeeccccccccchhhhhHHHHhcccCCcceeeecc------cccccchHHHHhcccCeEEEECCCCC
Confidence 234678999999999987643 3578999999999887764332211 23566778999999999999999999
Q ss_pred CCcchHHHHHhhCCeeEEEecCccccccccccC----CCCCceEEEEeCCCCCccchHHHHHcCC
Q 016487 274 FTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP----QDAEEYSVYINGENGNATRRIEDELMKI 334 (388)
Q Consensus 274 ~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP----idw~~fsV~i~~~~~~~~~~l~~~L~~i 334 (388)
++++||+|||++|||||||+|+ ++|| |||++|||+|++ ++++ +|+++|++|
T Consensus 248 ~~s~Rl~eal~~GcIPVii~d~-------~~lPf~~~ldw~~fsv~v~~-~~~~--~l~~iL~~i 302 (302)
T PF03016_consen 248 PWSRRLYEALAAGCIPVIISDD-------YVLPFEDVLDWSRFSVRVPE-ADLP--ELPEILRSI 302 (302)
T ss_pred cccchHHHHhhhceeeEEecCc-------ccCCcccccCHHHEEEEECH-HHHH--HHHHHHhcC
Confidence 9999999999999999999998 5788 899999999999 5899 999999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.83 E-value=1e-19 Score=181.46 Aligned_cols=276 Identities=14% Similarity=0.188 Sum_probs=181.1
Q ss_pred HHHHHhccCCCCCCCCCCCcEEEEcccccccccccccCCChhHHHHHHHHHHHHHhcChhhhccCCCCEEEEccCccccc
Q 016487 57 IFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDF 136 (388)
Q Consensus 57 ~fh~~l~~s~~rT~dP~eAdlFfVP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~W~R~~GrDH~~v~~~~~w~~ 136 (388)
.|.+-+-+..+.|.||+.||++.+-+-.- . .|-... ..++- -|-+.|+|+ +.|++|+++.-.
T Consensus 219 ~fq~t~~~n~~~ve~pd~ACiyi~lvge~--q-----~P~~l~----p~ele-klyslp~w~-~dg~Nhvl~Nl~----- 280 (907)
T KOG2264|consen 219 VFQETIPNNVYLVETPDKACIYIHLVGEI--Q-----SPVVLT----PAELE-KLYSLPHWR-TDGFNHVLFNLG----- 280 (907)
T ss_pred HHHHhcccceeEeeCCCccEEEEEEeccc--c-----CCCcCC----hHhhh-hhhcCcccc-CCCcceEEEEcc-----
Confidence 44455556678999999999997765431 1 111111 12222 377889994 899999999721
Q ss_pred cccCCCCCCCCcccccccccccceeeehcc-----CCCCCCceecCCCCCCCCCCCcchhhhhc--ccCCCCCCceEEee
Q 016487 137 MRTKSGPDYGASTLLNLPRVQNLSVLAIER-----NPWRTNQHGIPYPSYFHPCTSSQVLTWQH--SMRLSKRPHLFSFV 209 (388)
Q Consensus 137 ~r~~~~~~wgg~~~~~~~~~~n~t~l~ie~-----~~~~~~dv~iP~~~~f~p~~~~~~~~w~~--~~~~~~R~~L~~F~ 209 (388)
|. ++- .+.+......+ + +++.+ +..++.|.+||+. .|+... ..|++ ++-+.+|++|++|+
T Consensus 281 -r~---s~~-~n~lyn~~t~r--a-ivvQssf~~~q~RpgfDl~V~pv--~h~~~e---~~~~e~~p~vP~~RkyL~t~q 347 (907)
T KOG2264|consen 281 -RP---SDT-QNLLYNFQTGR--A-IVVQSSFYTVQIRPGFDLPVDPV--NHIAVE---KNFVELTPLVPFQRKYLITLQ 347 (907)
T ss_pred -Cc---ccc-ccceeEeccCc--e-EEEeecceeeeeccCCCcccCcc--cccccC---ccceecCcccchhhheeEEEE
Confidence 21 111 22233222222 1 12222 2346899888752 344322 23433 23468899999999
Q ss_pred cCCCCCCCc-hHHHHHHHHHHccCC-------ceeEeeeccCCCCC--------CCCCChhhHHHhhhcCeeeEe-cCCC
Q 016487 210 GAPRKGSQR-AAIRYELIKQCGESI-------RCKLLTCRYGSGAS--------NKCSSPSEILGVMSKSQFCLQ-APGD 272 (388)
Q Consensus 210 G~~~~~~~~-~~iR~~L~~~~~~~~-------~~~~~~~~~~~~~~--------~~~~~~~~y~~~m~~S~FCL~-P~Gd 272 (388)
|.+++..-+ ...+....++..+-+ -...+.|...-.++ ..|.....-.+++..|+|||+ |+||
T Consensus 348 gki~~~~ssLn~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d 427 (907)
T KOG2264|consen 348 GKIESDNSSLNEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGD 427 (907)
T ss_pred eeecccccccchhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCC
Confidence 988764212 234444434433321 23556665322221 346667788999999999997 8888
Q ss_pred CCCc-----chHHHHHhhCCeeEEEecCccccccccccC----CCCCceEEEEeCCCCCccchHHHHHcCCCHHHHHHHH
Q 016487 273 SFTR-----RSTFDSVLAGCIPVFFSRHTAYTQYMWYLP----QDAEEYSVYINGENGNATRRIEDELMKIPRERVERMR 343 (388)
Q Consensus 273 ~~~~-----~rl~dai~~GCIPVii~d~~~~~~y~~~lP----idw~~fsV~i~~~~~~~~~~l~~~L~~i~~~~~~~mr 343 (388)
+--+ .||++|+..||||||+++. ..|| +||.+.++++|. .+++ +++-+|+++..+++.+||
T Consensus 428 ~rv~S~~~~~r~~eaL~~GavPviLg~~-------~~LPyqd~idWrraal~lPk-aR~t--E~HFllrs~~dsDll~mR 497 (907)
T KOG2264|consen 428 PRVISEMFFQRFLEALQLGAVPVILGNS-------QLLPYQDLIDWRRAALRLPK-ARLT--EAHFLLRSFEDSDLLEMR 497 (907)
T ss_pred cchhhHHHHHHHHHHHhcCCeeEEeccc-------cccchHHHHHHHHHhhhCCc-cccc--hHHHHHHhcchhhHHHHH
Confidence 7533 6899999999999999987 3677 999999999999 6999 999999999999999999
Q ss_pred HHHhhhcCceEecCCCCCCCCCcccHHHHHHHHHHHHHh
Q 016487 344 KKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANHVQ 382 (388)
Q Consensus 344 ~~l~~~~~~~~y~~~~~~~~~~~~DAf~~~~~~l~~r~~ 382 (388)
++.+-+|..++ +. ..-.+++++..|+.|+.
T Consensus 498 RqGRl~wEtYl-----s~----~~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 498 RQGRLFWETYL-----SD----RHLLARTVLAALRYRLQ 527 (907)
T ss_pred hhhhhhHHHHh-----hH----HHHHHHHHHHHHHHhhC
Confidence 99976655544 31 23467888888877763
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.01 E-value=4.3e-09 Score=105.81 Aligned_cols=244 Identities=18% Similarity=0.133 Sum_probs=154.8
Q ss_pred HHHHHhccCCCCCCCCCCCcEEEEcccccccccccccCCChhHHHHHHHHHHHHHhcChhhhccCCCCEEEEccCccccc
Q 016487 57 IFHARLENHPLRTWDPSRATLFYVPFYGGLHASSKFRETNLTARDELAVRFSEFLESQPWWQRNNGKDHFVVLGRTAWDF 136 (388)
Q Consensus 57 ~fh~~l~~s~~rT~dP~eAdlFfVP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~p~W~R~~GrDH~~v~~~~~w~~ 136 (388)
.+.+....|.+.|.|+++|++| +|-.--+..+..-| .+. ..-|.+.-.|. .|.+|..+..-+..
T Consensus 127 ~lleA~~~S~yyt~n~N~aclf-~Ps~d~lnQn~l~~--------kl~---~~ala~l~~wd--rg~nH~~fnmLpGg-- 190 (691)
T KOG1022|consen 127 ALLEAWHLSFYYTFNYNGACLF-MPSSDELNQNPLSW--------KLE---KVALAKLLVWD--RGVNHEGFNMLPGG-- 190 (691)
T ss_pred HHHHHHHhccceecCCCceEEE-ecchhhhccCcchH--------HHH---HHHHhcccchh--cccceeeEeeccCC--
Confidence 3445556688999999999998 88555432221111 111 11244566897 78999988755432
Q ss_pred cccCCCCCCCCcccccccccccceeee-hccCCC---CCCceecCCCCCCCCCCCcchhhhhcccCCCCCCceEEeecCC
Q 016487 137 MRTKSGPDYGASTLLNLPRVQNLSVLA-IERNPW---RTNQHGIPYPSYFHPCTSSQVLTWQHSMRLSKRPHLFSFVGAP 212 (388)
Q Consensus 137 ~r~~~~~~wgg~~~~~~~~~~n~t~l~-ie~~~~---~~~dv~iP~~~~f~p~~~~~~~~w~~~~~~~~R~~L~~F~G~~ 212 (388)
.+++ +..+..+.. + +++. .....| .++||.+|.- .|.. ... ....+..|.+++- .
T Consensus 191 -----~p~y--ntaldv~~d-~-a~~~gggf~tW~yr~g~dv~ipv~---Sp~~-v~~----~~~~~g~r~~~l~----~ 249 (691)
T KOG1022|consen 191 -----DPTY--NTALDVGQD-E-AWYSGGGFGTWKYRKGNDVYIPVR---SPGN-VGR----AFLYDGSRYRVLQ----D 249 (691)
T ss_pred -----CCCc--cccccCCcc-e-eEEecCCcCcccccCCCccccccc---cccc-cCc----cccCCccceeeee----c
Confidence 2233 222222221 1 2221 122335 5789999872 2321 100 0011334544333 2
Q ss_pred CCCCCchHHHHHHHHHHccCCc-eeEe-eeccCCCCC-CCC--CChhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCC
Q 016487 213 RKGSQRAAIRYELIKQCGESIR-CKLL-TCRYGSGAS-NKC--SSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGC 287 (388)
Q Consensus 213 ~~~~~~~~iR~~L~~~~~~~~~-~~~~-~~~~~~~~~-~~~--~~~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GC 287 (388)
+.-.++.++|..|.+.....+. ...+ .|..-+.+. ..| +...+|...+...+||+.-+|.+-+..-+.+-+.+||
T Consensus 250 ~q~n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c 329 (691)
T KOG1022|consen 250 CQENYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASC 329 (691)
T ss_pred cccccchHhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhccc
Confidence 2223577899999988766543 2222 243322110 123 2346799999999999999988888888999999999
Q ss_pred eeEEEecCccccccccccC----CCCCceEEEEeCCCCCccchHHHHHcCCCHHHHHHHHHHHh
Q 016487 288 IPVFFSRHTAYTQYMWYLP----QDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVI 347 (388)
Q Consensus 288 IPVii~d~~~~~~y~~~lP----idw~~fsV~i~~~~~~~~~~l~~~L~~i~~~~~~~mr~~l~ 347 (388)
||||..|. +.|| +||..-||.++| .... ++.+.|.+|+...+-+|+.+..
T Consensus 330 ~pvi~vd~-------y~lpf~~Vvdw~~aSv~~~e-~~~~--~v~~~l~~i~~~~i~sl~~r~~ 383 (691)
T KOG1022|consen 330 APVISVDI-------YLLPFLGVVDWIVASVWCME-YYAG--KVMDALLNIETAGICSLQLRRI 383 (691)
T ss_pred ceeeeeeh-------hhhhhhhhhhceeeeEEeeh-hhHH--HHHHHhhcchhcchhhhhhhhh
Confidence 99999998 5788 899999999999 5777 9999999999988888887654
No 5
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=96.17 E-value=0.0086 Score=59.73 Aligned_cols=116 Identities=18% Similarity=0.363 Sum_probs=62.1
Q ss_pred CCCCceEEeecCCCCCCCchHHHHHHHHHHccCCceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecC---CCCCCc
Q 016487 200 SKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAP---GDSFTR 276 (388)
Q Consensus 200 ~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~---Gd~~~~ 276 (388)
..|+.++++..+-+. ...-|..+++.+.+.-. |++. |.-....+.......+.+++-+|.|+.. -....+
T Consensus 172 ~~K~~~~~w~~Snc~---~~~~R~~~~~~L~~~~~---vd~y-G~c~~~~~~~~~~~~~~~~~ykF~lafENs~c~dYiT 244 (349)
T PF00852_consen 172 KKKTKLAAWIVSNCN---PHSGREEYVRELSKYIP---VDSY-GKCGNNNPCPRDCKLELLSKYKFYLAFENSNCPDYIT 244 (349)
T ss_dssp -TSSEEEEE--S-S-----H-HHHHHHHHHHTTS----EEE--SSTT--SSS--S-HHHHHHTEEEEEEE-SS--TT---
T ss_pred cCCCceEEEEeeCcC---CcccHHHHHHHHHhhcC---eEcc-CCCCCCCCcccccccccccCcEEEEEecCCCCCCCCC
Confidence 345556555544332 23449999999988743 3321 2100001122345889999999999865 445567
Q ss_pred chHHHHHhhCCeeEEEe--cCccccccccccC----CCCCceEEEEeCCCCCccchHHHHHcCCC
Q 016487 277 RSTFDSVLAGCIPVFFS--RHTAYTQYMWYLP----QDAEEYSVYINGENGNATRRIEDELMKIP 335 (388)
Q Consensus 277 ~rl~dai~~GCIPVii~--d~~~~~~y~~~lP----idw~~fsV~i~~~~~~~~~~l~~~L~~i~ 335 (388)
--||+|+.+|||||+++ ... |.-.+| |+.++|. . +++|.+.|..+.
T Consensus 245 EK~~~al~~g~VPI~~G~~~~~----~~~~~P~~SfI~~~df~-------s--~~~La~yl~~l~ 296 (349)
T PF00852_consen 245 EKFWNALLAGTVPIYWGPPRPN----YEEFAPPNSFIHVDDFK-------S--PKELADYLKYLD 296 (349)
T ss_dssp HHHHHHHHTTSEEEEES---TT----HHHHS-GGGSEEGGGSS-------S--HHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEEEECCEecc----cccCCCCCCccchhcCC-------C--HHHHHHHHHHHh
Confidence 78999999999999999 432 222355 4444442 2 237777777664
No 6
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.00 E-value=0.057 Score=51.87 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=61.7
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..++.+.|..|.+++.|.+.......++|||.+|| |||.++..... ++ +.-....+.++.. +.. .+.+.|.
T Consensus 257 ~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~~~----~~-i~~~~~g~~~~~~-~~~--~l~~~i~ 327 (364)
T cd03814 257 GEELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGGPA----DI-VTDGENGLLVEPG-DAE--AFAAALA 327 (364)
T ss_pred HHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCCch----hh-hcCCcceEEcCCC-CHH--HHHHHHH
Confidence 35678899999999999887776778999999999 88888764211 11 2223445555552 332 3444444
Q ss_pred CC--CHHHHHHHHHHHhhhcCceE
Q 016487 333 KI--PRERVERMRKKVIDLIPRVT 354 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~~~~~~~ 354 (388)
.+ .++...+|.++..+....+.
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~~ 351 (364)
T cd03814 328 ALLADPELRRRMAARARAEAERRS 351 (364)
T ss_pred HHHcCHHHHHHHHHHHHHHHhhcC
Confidence 33 47788888888877654444
No 7
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=95.79 E-value=0.12 Score=49.74 Aligned_cols=92 Identities=10% Similarity=0.110 Sum_probs=61.7
Q ss_pred hhHHHhhhcCeeeEecCCCC--CCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDS--FTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDEL 331 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~--~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L 331 (388)
.++.+.|+.|.+++.|.... ..+..+.|||.+|+ |||.++.... -.+ .+ ..-.+.++. .+.. .+.+.|
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~~----~~i-~~-~~~g~~~~~-~d~~--~~~~~l 328 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGHA----EEV-LD-GGTGLLVPP-GDPA--ALAEAI 328 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCCh----hee-ee-CCCcEEEcC-CCHH--HHHHHH
Confidence 56789999999999998777 66677999999999 9999886320 011 12 233445555 2333 555555
Q ss_pred cCC--CHHHHHHHHHHHhhhcCceEe
Q 016487 332 MKI--PRERVERMRKKVIDLIPRVTY 355 (388)
Q Consensus 332 ~~i--~~~~~~~mr~~l~~~~~~~~y 355 (388)
..+ .++...+|+++..+....|.|
T Consensus 329 ~~l~~~~~~~~~~~~~~~~~~~~~s~ 354 (366)
T cd03822 329 RRLLADPELAQALRARAREYARAMSW 354 (366)
T ss_pred HHHHcChHHHHHHHHHHHHHHhhCCH
Confidence 443 356788888888776665443
No 8
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.62 E-value=0.1 Score=50.14 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=61.0
Q ss_pred hhHHHhhhcCeeeEecCCCCCC-----cchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFT-----RRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIE 328 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~-----~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~ 328 (388)
.++.+.|..+.+++.|...+.. ...++||+.+|| |||.++..... +. +.-....+.++. .+.. .+.
T Consensus 286 ~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~~----~~-~~~~~~g~~~~~-~~~~--~l~ 356 (394)
T cd03794 286 EELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGESA----EL-VEEAGAGLVVPP-GDPE--ALA 356 (394)
T ss_pred HHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCch----hh-hccCCcceEeCC-CCHH--HHH
Confidence 5788899999999999766543 446899999997 88888764211 11 222245566665 2444 566
Q ss_pred HHHcCC--CHHHHHHHHHHHhhhcC-ceEe
Q 016487 329 DELMKI--PRERVERMRKKVIDLIP-RVTY 355 (388)
Q Consensus 329 ~~L~~i--~~~~~~~mr~~l~~~~~-~~~y 355 (388)
+.|..+ .+++..+|.++..+... +|.|
T Consensus 357 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 386 (394)
T cd03794 357 AAILELLDDPEERAEMGENGRRYVEEKFSR 386 (394)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence 666554 57788888877766443 5544
No 9
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.36 E-value=0.16 Score=48.19 Aligned_cols=92 Identities=9% Similarity=0.072 Sum_probs=57.9
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..+..+.|+.|.+++.|.........++||+.+|| |||.++..... ++ +.-....+.++.+ +.. .+.+.+.
T Consensus 254 ~~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~~----~~-i~~~~~g~~~~~~-~~~--~~~~~i~ 324 (359)
T cd03808 254 RDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGCR----EA-VIDGVNGFLVPPG-DAE--ALADAIE 324 (359)
T ss_pred cccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCch----hh-hhcCcceEEECCC-CHH--HHHHHHH
Confidence 34677899999999999876666677999999995 88888763211 11 2213345566652 333 4555544
Q ss_pred CC--CHHHHHHHHHHHhhh-cCce
Q 016487 333 KI--PRERVERMRKKVIDL-IPRV 353 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~~-~~~~ 353 (388)
.+ .++...+|.++..+. ..+|
T Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~ 348 (359)
T cd03808 325 RLIEDPELRARMGQAARKRAEEEF 348 (359)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhc
Confidence 43 356677776666554 4444
No 10
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=95.19 E-value=0.12 Score=45.03 Aligned_cols=86 Identities=16% Similarity=0.208 Sum_probs=53.4
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..++.+.++.|.+.++|.........+.|||.+|| |||.++.... ...+ .+.. -.+.++. .+.. ++.+.+.
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~~---~e~~-~~~~-~g~~~~~-~~~~--~l~~~i~ 153 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGGN---NEII-NDGV-NGFLFDP-NDIE--ELADAIE 153 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTHH---HHHS-GTTT-SEEEEST-TSHH--HHHHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccCC---ceee-cccc-ceEEeCC-CCHH--HHHHHHH
Confidence 46889999999999999988888889999999999 6667764211 1111 1222 2355655 2444 6666665
Q ss_pred CCC--HHHHHHHHHHHh
Q 016487 333 KIP--RERVERMRKKVI 347 (388)
Q Consensus 333 ~i~--~~~~~~mr~~l~ 347 (388)
.+- ++....|.++.+
T Consensus 154 ~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhc
Confidence 543 355666666543
No 11
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=94.87 E-value=0.22 Score=47.02 Aligned_cols=93 Identities=10% Similarity=0.138 Sum_probs=61.5
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..++.+.|..|.+.+.|.-.......++||+.+|| |||.++..... ++ +......+.++. .+.. ++.+.|.
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~~~~----~~-~~~~~~g~~~~~-~~~~--~l~~~i~ 336 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGIP----EV-VEDGETGLLVPP-GDPE--ALAEAIL 336 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCCChh----HH-hcCCcceEEeCC-CCHH--HHHHHHH
Confidence 36789999999999999866666667999999997 67777642211 11 333455666666 3334 6666666
Q ss_pred CC--CHHHHHHHHHHHh-hhcCceE
Q 016487 333 KI--PRERVERMRKKVI-DLIPRVT 354 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~-~~~~~~~ 354 (388)
.+ .++...+|.++.. .+...+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03801 337 RLLDDPELRRRLGEAARERVAERFS 361 (374)
T ss_pred HHHcChHHHHHHHHHHHHHHHHhcC
Confidence 53 4666777877766 3444444
No 12
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=94.33 E-value=0.57 Score=45.01 Aligned_cols=93 Identities=10% Similarity=0.146 Sum_probs=60.6
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..++.+.+..+.+++.|.-....+..++||+.+|| |||.++..+. -++ + .+..+.++. ++.. .+.+.|.
T Consensus 263 ~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~~----~e~-~--~~~~~~~~~-~~~~--~~~~~i~ 331 (365)
T cd03809 263 DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISSL----PEV-A--GDAALYFDP-LDPE--ALAAAIE 331 (365)
T ss_pred hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCCc----cce-e--cCceeeeCC-CCHH--HHHHHHH
Confidence 35678899999999998644444556999999997 7887765321 111 2 234555655 2444 5666655
Q ss_pred C-C-CHHHHHHHHHHHhhhcCceEec
Q 016487 333 K-I-PRERVERMRKKVIDLIPRVTYK 356 (388)
Q Consensus 333 ~-i-~~~~~~~mr~~l~~~~~~~~y~ 356 (388)
. + .++...+|.++...+...+.|.
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 332 RLLEDPALREELRERGLARAKRFSWE 357 (365)
T ss_pred HHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 5 3 4677788888777666666554
No 13
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=94.18 E-value=0.55 Score=45.82 Aligned_cols=92 Identities=10% Similarity=0.131 Sum_probs=58.3
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|+.|..++.|.-.......+.|||.+| +|||.++.... -++ +.-..-...++. .+.. ++.+.+..
T Consensus 262 ~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~~----~e~-i~~~~~G~~~~~-~~~~--~l~~~i~~ 332 (371)
T cd04962 262 DHVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGGI----PEV-VKHGETGFLVDV-GDVE--AMAEYALS 332 (371)
T ss_pred ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCCc----hhh-hcCCCceEEcCC-CCHH--HHHHHHHH
Confidence 467889999999999974444456799999999 78888876310 111 322233445555 2333 44444433
Q ss_pred C--CHHHHHHHHHHHhhh-cCceE
Q 016487 334 I--PRERVERMRKKVIDL-IPRVT 354 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~-~~~~~ 354 (388)
+ .++...+|+++.... ..+|.
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~~fs 356 (371)
T cd04962 333 LLEDDELWQEFSRAARNRAAERFD 356 (371)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCC
Confidence 2 477888888888765 44444
No 14
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=94.13 E-value=0.49 Score=44.53 Aligned_cols=94 Identities=9% Similarity=0.035 Sum_probs=61.1
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|+++.+++.|.........++|||.+||.+ |.++.... + .++ ++-....+.++. .+.. ++.+.+..
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~Pv-i~~~~~~~-~--~~~-~~~~~~g~~~~~-~~~~--~~~~~i~~ 315 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLPV-ISFDCPTG-P--SEI-IEDGVNGLLVPN-GDVE--ALAEALLR 315 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCCE-EEecCCCc-h--Hhh-hccCcceEEeCC-CCHH--HHHHHHHH
Confidence 678899999999999986655566799999999865 45543210 0 111 233335566665 3433 55555555
Q ss_pred C--CHHHHHHHHHHHhhhcCceEe
Q 016487 334 I--PRERVERMRKKVIDLIPRVTY 355 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~~~~~~y 355 (388)
+ .++...+|.++...+...|.|
T Consensus 316 ll~~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 316 LMEDEELRKRMGANARESAERFSI 339 (348)
T ss_pred HHcCHHHHHHHHHHHHHHHHHhCH
Confidence 4 577888888887766665544
No 15
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=94.09 E-value=0.46 Score=45.93 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=59.6
Q ss_pred hhhHHHhhhcCeeeEecC-CCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHH
Q 016487 253 PSEILGVMSKSQFCLQAP-GDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDEL 331 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~-Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L 331 (388)
..++.+.|+.|..++.|. -.......++|||++|| |||.++..... ++ +.-....+.++. ++.. .+.+.|
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~-PvI~~~~~~~~----e~-i~~~~~g~~~~~-~~~~--~l~~~i 324 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGR-PVIASDHGGAR----ET-VRPGETGLLVPP-GDAE--ALAQAL 324 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCC-CEEEcCCCCcH----HH-HhCCCceEEeCC-CCHH--HHHHHH
Confidence 456788999999999987 33333356999999999 88888753211 11 333334555665 3444 666665
Q ss_pred c-C--CCHHHHHHHHHHHhhhc-CceEe
Q 016487 332 M-K--IPRERVERMRKKVIDLI-PRVTY 355 (388)
Q Consensus 332 ~-~--i~~~~~~~mr~~l~~~~-~~~~y 355 (388)
. . .++++..+|.++.++.. .+|.|
T Consensus 325 ~~~~~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 325 DQILSLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHhhhh
Confidence 2 2 25778888888876643 44443
No 16
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=94.07 E-value=0.33 Score=46.37 Aligned_cols=92 Identities=10% Similarity=0.162 Sum_probs=57.6
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|..+.+++.|.-.......++|||.+|| |||.++..... ++ +.- ...+.++.+ . . .+.+.+..
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~----~~-~~~-~~~~~~~~~-~-~--~~~~~i~~ 341 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPWQ----EL-IEY-GCGWVVDDD-V-D--ALAAALRR 341 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCHH----HH-hhc-CceEEeCCC-h-H--HHHHHHHH
Confidence 4678889999999999865555667999999996 88888763211 11 222 444555542 1 2 44444433
Q ss_pred C--CHHHHHHHHHHHhhh-cCceEec
Q 016487 334 I--PRERVERMRKKVIDL-IPRVTYK 356 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~-~~~~~y~ 356 (388)
+ .++..++|.++..+. ...|.|.
T Consensus 342 l~~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 342 ALELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhcCHH
Confidence 3 246777787777665 5555443
No 17
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=94.03 E-value=0.51 Score=46.42 Aligned_cols=94 Identities=7% Similarity=0.114 Sum_probs=60.5
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.+..|..++.|.-.......++|||.+| +|||.++.... . ++ +.-....+.++.. +.. .+.+.+..
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G-~Pvi~s~~~~~---~-e~-i~~~~~g~~~~~~-~~~--~l~~~i~~ 364 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG-LPVVATAVGGP---R-DI-VVDGVTGLLVDPR-DPE--ALAAALRR 364 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC-CCEEECCCCCH---H-HH-ccCCCCeEEeCCC-CHH--HHHHHHHH
Confidence 457788999999999976655556799999999 59999875311 0 11 3333445666652 333 45444443
Q ss_pred C--CHHHHHHHHHHHhhhc-CceEec
Q 016487 334 I--PRERVERMRKKVIDLI-PRVTYK 356 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~~-~~~~y~ 356 (388)
+ .++.+.+|.++..+.. .+|.|.
T Consensus 365 l~~~~~~~~~~~~~a~~~~~~~~s~~ 390 (398)
T cd03800 365 LLTDPALRRRLSRAGLRRARARYTWE 390 (398)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 3 4677888888776644 555543
No 18
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=93.83 E-value=0.51 Score=46.54 Aligned_cols=91 Identities=7% Similarity=0.022 Sum_probs=58.5
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIEDEL 331 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~~L 331 (388)
.+..+.|+.|.+++.|.-.......++|||.+|+ |||.+|.. ..+ +.-....+.++. ++.. .+.+.|
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~-------g~~e~i~~~~~g~~~~~-~d~~--~la~~i 332 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG-------GNPELVQHGVTGALVPP-GDAV--ALARAL 332 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC-------CcHHHhcCCCceEEeCC-CCHH--HHHHHH
Confidence 4678889999999888655555567999999996 99998863 233 333445666766 2443 555555
Q ss_pred cCC--CHHHHHHHHHHHhhh-cCceEe
Q 016487 332 MKI--PRERVERMRKKVIDL-IPRVTY 355 (388)
Q Consensus 332 ~~i--~~~~~~~mr~~l~~~-~~~~~y 355 (388)
..+ .++....|.++.++. ...|.|
T Consensus 333 ~~l~~~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 333 QPYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 443 355666666665543 345543
No 19
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=93.61 E-value=0.52 Score=44.80 Aligned_cols=92 Identities=7% Similarity=0.089 Sum_probs=57.4
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|..+.+++.|......+..++|||.+|| |||.++..... ++-.+ ..+.++.+ +.. ++.+.+..
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~~----e~~~~---~g~~~~~~-~~~--~l~~~i~~ 328 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDNA----ELVGD---TGFLVPPG-DPE--ALAEAIEA 328 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCChH----HHhhc---CCEEeCCC-CHH--HHHHHHHH
Confidence 4577899999999999877666677999999996 88888753211 11022 45566652 333 45544443
Q ss_pred C--CHHHHHHHHHHHhh-hcCceEec
Q 016487 334 I--PRERVERMRKKVID-LIPRVTYK 356 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~-~~~~~~y~ 356 (388)
+ .++...+|.++..+ +...|.|.
T Consensus 329 l~~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 329 LLADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred HHhChHHHHHHHHHHHHHHHHhCCHH
Confidence 3 24566666666654 33445443
No 20
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=93.39 E-value=0.68 Score=46.22 Aligned_cols=95 Identities=14% Similarity=0.182 Sum_probs=60.1
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|+.+..++.|.=.......+.|||.+|| |||.++.... . ++ +.-....+.++. .+.. .+.+.|..
T Consensus 294 ~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~~---~-e~-i~~~~~g~~~~~-~d~~--~la~~i~~ 364 (405)
T TIGR03449 294 EELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGGL---P-VA-VADGETGLLVDG-HDPA--DWADALAR 364 (405)
T ss_pred HHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCCc---H-hh-hccCCceEECCC-CCHH--HHHHHHHH
Confidence 5678899999998888644444456999999996 8888875310 0 11 322344556665 2333 44444433
Q ss_pred C--CHHHHHHHHHHHhhhcCceEecC
Q 016487 334 I--PRERVERMRKKVIDLIPRVTYKH 357 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~~~~~~y~~ 357 (388)
+ .++...+|.++..+....|.|..
T Consensus 365 ~l~~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 365 LLDDPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred HHhCHHHHHHHHHHHHHHHHhCCHHH
Confidence 2 46777888888877666665544
No 21
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=93.24 E-value=0.76 Score=46.00 Aligned_cols=94 Identities=12% Similarity=0.100 Sum_probs=57.3
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..++.+.|+.|..++.|.-.......++|||++|| |||.++.... . ++ +.-..-.+.++.. +.. .+.+.+.
T Consensus 291 ~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~-PVIas~~~g~---~-e~-i~~~~~G~lv~~~-d~~--~la~~i~ 361 (396)
T cd03818 291 YDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGC-LVVGSDTAPV---R-EV-ITDGENGLLVDFF-DPD--ALAAAVI 361 (396)
T ss_pred HHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCC-CEEEcCCCCc---h-hh-cccCCceEEcCCC-CHH--HHHHHHH
Confidence 35678889999988887654444456999999999 8888875311 0 11 3333445666652 333 4444433
Q ss_pred CC--CHHHHHHHHHHHhhhc-CceEe
Q 016487 333 KI--PRERVERMRKKVIDLI-PRVTY 355 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~~~-~~~~y 355 (388)
.+ .++...+|.++.++.. .+|.|
T Consensus 362 ~ll~~~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 362 ELLDDPARRARLRRAARRTALRYDLL 387 (396)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhccH
Confidence 32 3567778877776533 33544
No 22
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=93.24 E-value=0.62 Score=44.93 Aligned_cols=91 Identities=7% Similarity=0.072 Sum_probs=54.4
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|..+.+.+.|.........++|||.+|| |||.+|.... -++--+ ....++. .+.. .+.+.+..
T Consensus 254 ~~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~----~e~i~~---~g~~~~~-~~~~--~~~~~i~~ 322 (360)
T cd04951 254 DDIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGV----REVVGD---SGLIVPI-SDPE--ALANKIDE 322 (360)
T ss_pred ccHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCCh----hhEecC---CceEeCC-CCHH--HHHHHHHH
Confidence 3567889999999998876655667999999999 8888875321 111022 2334444 2333 44444443
Q ss_pred C---CHHHHHHHHHHHhhhcCceEe
Q 016487 334 I---PRERVERMRKKVIDLIPRVTY 355 (388)
Q Consensus 334 i---~~~~~~~mr~~l~~~~~~~~y 355 (388)
+ +++....|.++...+...|.|
T Consensus 323 ll~~~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 323 ILKMSGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred HHhCCHHHHHHHHHHHHHHHHhcCH
Confidence 2 455556666553335455443
No 23
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=93.21 E-value=0.17 Score=52.21 Aligned_cols=96 Identities=10% Similarity=0.128 Sum_probs=66.9
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCC---CceEEEEeCCCCCccchHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDA---EEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw---~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.+..+.|+.+..++.|.........++|||.+| +|||.++.... -++ ++- ....+.++. .+.. .+.+.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg~----~ei-v~~~~~~~~G~lv~~-~d~~--~la~~ 393 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGGI----PDI-IPPDQEGKTGFLYTP-GDVD--DCVEK 393 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCCc----Hhh-hhcCCCCCceEEeCC-CCHH--HHHHH
Confidence 578899999999999987766667899999999 89999875310 011 322 555677766 3444 55554
Q ss_pred HcCC--CHHHHHHHHHHHhhhcCceEecCC
Q 016487 331 LMKI--PRERVERMRKKVIDLIPRVTYKHP 358 (388)
Q Consensus 331 L~~i--~~~~~~~mr~~l~~~~~~~~y~~~ 358 (388)
|..+ .++...+|.++.++....|.|...
T Consensus 394 i~~ll~~~~~~~~~~~~a~~~~~~fsw~~~ 423 (465)
T PLN02871 394 LETLLADPELRERMGAAAREEVEKWDWRAA 423 (465)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 4443 477888898888877666665543
No 24
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=93.03 E-value=1 Score=43.84 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=57.6
Q ss_pred hhHHHhhhcCeeeEecCCC------CCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchH
Q 016487 254 SEILGVMSKSQFCLQAPGD------SFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRI 327 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd------~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l 327 (388)
.+..+.|..|...+.|.-. ......++|||.+|| |||.++..... ++ +.-....+.++. .+.. ++
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~-PvI~s~~~~~~----e~-i~~~~~g~~~~~-~d~~--~l 326 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGV-PVVATRHGGIP----EA-VEDGETGLLVPE-GDVA--AL 326 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCC-CEEEeCCCCch----hh-eecCCeeEEECC-CCHH--HH
Confidence 5677889999988887532 112346999999996 99998874211 11 333445667765 2443 55
Q ss_pred HHHHcCC--CHHHHHHHHHHHhh-hcCceEec
Q 016487 328 EDELMKI--PRERVERMRKKVID-LIPRVTYK 356 (388)
Q Consensus 328 ~~~L~~i--~~~~~~~mr~~l~~-~~~~~~y~ 356 (388)
.+.|..+ +++...+|.++..+ +..+|.|.
T Consensus 327 ~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~ 358 (367)
T cd05844 327 AAALGRLLADPDLRARMGAAGRRRVEERFDLR 358 (367)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHH
Confidence 5555443 35667778777655 33555543
No 25
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=92.93 E-value=0.68 Score=43.95 Aligned_cols=42 Identities=10% Similarity=0.066 Sum_probs=34.9
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCc
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHT 296 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~ 296 (388)
.+..+.+.+|.+++.|.........++||+.+|| |||.++..
T Consensus 270 ~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~ 311 (377)
T cd03798 270 EEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVG 311 (377)
T ss_pred HHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCC
Confidence 5678999999999999876666677999999999 67777653
No 26
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=92.80 E-value=0.2 Score=49.38 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=62.5
Q ss_pred hhHHHhhhcCeeeEecCCCC-----------CCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCC
Q 016487 254 SEILGVMSKSQFCLQAPGDS-----------FTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGN 322 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~-----------~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~ 322 (388)
.+..+.|.. .|+|++.+++ .....++++|++| +|||.++..+...+ +.-....+.++. .
T Consensus 218 eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-~PVI~~~~~~~~~~-----V~~~~~G~~v~~---~ 287 (333)
T PRK09814 218 EELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-LPVIVWSKAAIADF-----IVENGLGFVVDS---L 287 (333)
T ss_pred HHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-CCEEECCCccHHHH-----HHhCCceEEeCC---H
Confidence 455556655 9999988761 1223488888888 59999987532211 333455566652 3
Q ss_pred ccchHHHHHcCCCHHHHHHHHHHHhhhcCceE
Q 016487 323 ATRRIEDELMKIPRERVERMRKKVIDLIPRVT 354 (388)
Q Consensus 323 ~~~~l~~~L~~i~~~~~~~mr~~l~~~~~~~~ 354 (388)
. ++.+.|..++++++.+|+++.+++.+.+.
T Consensus 288 ~--el~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 288 E--ELPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred H--HHHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 3 89999999999999999999999887665
No 27
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=92.49 E-value=0.88 Score=44.87 Aligned_cols=94 Identities=11% Similarity=0.095 Sum_probs=58.9
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCC------ccch
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGN------ATRR 326 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~------~~~~ 326 (388)
..+..+.|..|..++.|.-.......++||+.+|| |||.++.... -++ +.-....+.++.. +. . .
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~----~e~-i~~~~~G~~~~~~-~~~~~~~~~--~ 341 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI----PEV-VVDGETGFLVPPD-NSDADGFQA--E 341 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH----HHH-hhCCCceEEcCCC-CCcccchHH--H
Confidence 35678889999999998755555566899999999 8998875310 111 3223335556552 33 2 4
Q ss_pred HHHHHcCC--CHHHHHHHHHHHhh-hcCceEe
Q 016487 327 IEDELMKI--PRERVERMRKKVID-LIPRVTY 355 (388)
Q Consensus 327 l~~~L~~i--~~~~~~~mr~~l~~-~~~~~~y 355 (388)
+.+.|..+ .+++..+|.++.++ +...|.|
T Consensus 342 l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 342 LAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 55555433 46777788777665 3345544
No 28
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=92.31 E-value=0.79 Score=45.05 Aligned_cols=94 Identities=11% Similarity=0.121 Sum_probs=58.2
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
.+..+.|+++..++.|.-.......+.|||.+|| |||.++-.. .. -++ +.-..-.+.++.. +.. .+.+.|..
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~~-g~--~~~-v~~~~~G~lv~~~-d~~--~la~~i~~ 341 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVNY-GP--SEI-IEDGENGYLVPKG-DIE--ALAEAIIE 341 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCCC-Cc--HHH-cccCCCceEeCCC-cHH--HHHHHHHH
Confidence 4567889999999998754444456999999999 788776320 00 011 3223445566652 333 44444333
Q ss_pred C--CHHHHHHHHHHHhhhcCceEe
Q 016487 334 I--PRERVERMRKKVIDLIPRVTY 355 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~~~~~~~y 355 (388)
+ .++.+.+|+++..+....|.+
T Consensus 342 ll~~~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 342 LLNDPKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred HHcCHHHHHHHHHHHHHHHHHhhH
Confidence 2 467888898888776665544
No 29
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=91.96 E-value=1.5 Score=44.64 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=55.2
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCC---CCceEEEEeCCCCCccchHHH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQD---AEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPid---w~~fsV~i~~~~~~~~~~l~~ 329 (388)
..+..+.|+.|..++.|.=+..-.-.+.|||++||+||.-...-. . -++ +. -..-.+.++..+++. +.|.+
T Consensus 315 ~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~-~~i-v~~~~~g~~G~l~~d~~~la-~ai~~ 388 (419)
T cd03806 315 FEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---L-LDI-VVPWDGGPTGFLASTAEEYA-EAIEK 388 (419)
T ss_pred HHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCC---c-hhe-eeccCCCCceEEeCCHHHHH-HHHHH
Confidence 467889999999999886544445679999999997665432210 0 011 21 122222232102222 13333
Q ss_pred HHcCCCHHHHHHHHHHHhhhcCceEec
Q 016487 330 ELMKIPRERVERMRKKVIDLIPRVTYK 356 (388)
Q Consensus 330 ~L~~i~~~~~~~mr~~l~~~~~~~~y~ 356 (388)
+|. .+++....|+++-+++..+|.+.
T Consensus 389 ll~-~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 389 ILS-LSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred HHh-CCHHHHHHHHHHHHHHHHhhCHH
Confidence 343 35666666777777777776644
No 30
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=91.11 E-value=0.58 Score=44.67 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=55.8
Q ss_pred hhHHHhhhcCeeeEecCC-CCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 254 SEILGVMSKSQFCLQAPG-DSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~G-d~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
.+..+.|..|..++.|.- .......++|||.+| +|||.++.... -++ ++.....+.++.+ +.. .+.+.+.
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~~~~~Ea~a~G-~Pvi~~~~~~~----~e~-i~~~~~g~~~~~~-d~~--~l~~~i~ 324 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFPLVIREALAAG-VPVIASDIGGM----AEL-VRDGVNGLLFPPG-DAE--DLAAALE 324 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCChHHHHHHHCC-CCEEECCCCCH----HHH-hcCCCcEEEECCC-CHH--HHHHHHH
Confidence 678889999999999963 334445699999999 77888775321 111 3444456667663 443 4555444
Q ss_pred CC--CHHHHHHHHHHHhh
Q 016487 333 KI--PRERVERMRKKVID 348 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~ 348 (388)
.+ .++...+|+++..+
T Consensus 325 ~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 325 RLIDDPDLLERLRAGIEP 342 (359)
T ss_pred HHHhChHHHHHHHHhHHH
Confidence 33 46777777777654
No 31
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=91.00 E-value=2.4 Score=43.03 Aligned_cols=89 Identities=12% Similarity=0.262 Sum_probs=59.1
Q ss_pred hhHHHhhhcCeeeEecCC-------CCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCcc
Q 016487 254 SEILGVMSKSQFCLQAPG-------DSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNAT 324 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~G-------d~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~ 324 (388)
.+..+.|+.+..++.|.= ++. ...++|||.+|+ |||.++.. -.| +.-..-.+.+++ .+..
T Consensus 290 ~el~~~l~~aDv~v~pS~~~~~g~~Eg~-p~~llEAma~G~-PVI~t~~~-------g~~E~v~~~~~G~lv~~-~d~~- 358 (406)
T PRK15427 290 HEVKAMLDDADVFLLPSVTGADGDMEGI-PVALMEAMAVGI-PVVSTLHS-------GIPELVEADKSGWLVPE-NDAQ- 358 (406)
T ss_pred HHHHHHHHhCCEEEECCccCCCCCccCc-cHHHHHHHhCCC-CEEEeCCC-------CchhhhcCCCceEEeCC-CCHH-
Confidence 567889999999998852 232 345999999995 99998763 223 433444667776 3444
Q ss_pred chHHHHHcCC---CHHHHHHHHHHHhh-hcCceE
Q 016487 325 RRIEDELMKI---PRERVERMRKKVID-LIPRVT 354 (388)
Q Consensus 325 ~~l~~~L~~i---~~~~~~~mr~~l~~-~~~~~~ 354 (388)
.+.+.|..+ ++++..+|.++.++ +...|.
T Consensus 359 -~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~ 391 (406)
T PRK15427 359 -ALAQRLAAFSQLDTDELAPVVKRAREKVETDFN 391 (406)
T ss_pred -HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcC
Confidence 565555543 56778888888765 344444
No 32
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=89.87 E-value=6 Score=39.55 Aligned_cols=95 Identities=7% Similarity=0.115 Sum_probs=53.8
Q ss_pred hhHHHhhhcCeeeEecCCC-CCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEE-EEeCCCCCccchHHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGD-SFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSV-YINGENGNATRRIEDEL 331 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd-~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV-~i~~~~~~~~~~l~~~L 331 (388)
.+..+.|+.|..++.|... ......++|||++| +|||.++.... -++-.|. .-.. .++. .+.. .+.+.|
T Consensus 268 ~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~----~Eiv~~~-~~G~~l~~~-~d~~--~la~~I 338 (380)
T PRK15484 268 EKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGI----TEFVLEG-ITGYHLAEP-MTSD--SIISDI 338 (380)
T ss_pred HHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCc----HhhcccC-CceEEEeCC-CCHH--HHHHHH
Confidence 4678889999999999753 33345689999999 78999876321 0110232 2222 3333 1222 444444
Q ss_pred cC-CCHHHHHHHHHHHhh-hcCceEecC
Q 016487 332 MK-IPRERVERMRKKVID-LIPRVTYKH 357 (388)
Q Consensus 332 ~~-i~~~~~~~mr~~l~~-~~~~~~y~~ 357 (388)
.. +...+..+|.++.++ +..+|.|..
T Consensus 339 ~~ll~d~~~~~~~~~ar~~~~~~fsw~~ 366 (380)
T PRK15484 339 NRTLADPELTQIAEQAKDFVFSKYSWEG 366 (380)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHhCCHHH
Confidence 32 223334667766654 456665543
No 33
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=89.86 E-value=0.51 Score=36.94 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=43.6
Q ss_pred eEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCCCHHHHHHHHHH
Q 016487 266 CLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKK 345 (388)
Q Consensus 266 CL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i~~~~~~~mr~~ 345 (388)
||.|.-.+..+.|+||++++|+..|.-. ...+. .+ ++..+-.+.++..+++. ...+.|.+ .++++++|.++
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~vi~~~-~~~~~----~~-~~~~~~~~~~~~~~el~--~~i~~ll~-~~~~~~~ia~~ 72 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPVISDD-SPGLR----EI-FEDGEHIITYNDPEELA--EKIEYLLE-NPEERRRIAKN 72 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeEEECC-hHHHH----HH-cCCCCeEEEECCHHHHH--HHHHHHHC-CHHHHHHHHHH
Confidence 4445433445568999999998654443 22111 11 55554455554212333 33333333 67888888888
Q ss_pred Hhh-hcCceEe
Q 016487 346 VID-LIPRVTY 355 (388)
Q Consensus 346 l~~-~~~~~~y 355 (388)
..+ +..++.|
T Consensus 73 a~~~v~~~~t~ 83 (92)
T PF13524_consen 73 ARERVLKRHTW 83 (92)
T ss_pred HHHHHHHhCCH
Confidence 766 3334444
No 34
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=89.55 E-value=7.4 Score=37.01 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=54.8
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCC-CCccchHHHHH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGEN-GNATRRIEDEL 331 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~-~~~~~~l~~~L 331 (388)
..++.+.|..|.+.+.|.........++|||.+|+ |||.++..+.. ++ +.-....+.++.++ ++. ..|.+++
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~~~----~~-i~~~~~g~~~~~~~~~~~-~~i~~l~ 341 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPGLP----DL-VADGENGFLFPPGDEALA-EALLRLL 341 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCChh----hh-eecCceeEEeCCCCHHHH-HHHHHHH
Confidence 35678899999999999866556667999999976 56666653211 11 22223455555532 111 1333333
Q ss_pred cCCCHHHHHHHHHHHhhhcCc
Q 016487 332 MKIPRERVERMRKKVIDLIPR 352 (388)
Q Consensus 332 ~~i~~~~~~~mr~~l~~~~~~ 352 (388)
. .++..++|+++.++....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 342 Q--DPELRRRLSKNAEESAEK 360 (374)
T ss_pred h--ChHHHHHHHHHHHHHHHH
Confidence 3 355567788777765544
No 35
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=89.53 E-value=4.5 Score=39.96 Aligned_cols=93 Identities=16% Similarity=0.081 Sum_probs=57.3
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHHH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.......++.+..++.|.........+.||+++| +|||.++.. .++ +.-....+.++..+... ..|.++
T Consensus 264 ~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~-------~~~~~i~~~~~g~~~~~~~~~a-~~i~~l 334 (372)
T cd03792 264 DLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVG-------GIPLQIEDGETGFLVDTVEEAA-VRILYL 334 (372)
T ss_pred HHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCC-------CchhhcccCCceEEeCCcHHHH-HHHHHH
Confidence 3566788899999998875555556799999999 599998753 122 32222233343311121 134444
Q ss_pred HcCCCHHHHHHHHHHHhhh-cCceEec
Q 016487 331 LMKIPRERVERMRKKVIDL-IPRVTYK 356 (388)
Q Consensus 331 L~~i~~~~~~~mr~~l~~~-~~~~~y~ 356 (388)
|. +++...+|.++..+. ...|.|.
T Consensus 335 l~--~~~~~~~~~~~a~~~~~~~~s~~ 359 (372)
T cd03792 335 LR--DPELRRKMGANAREHVRENFLIT 359 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHHcCHH
Confidence 44 467778888887764 4455543
No 36
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=88.52 E-value=16 Score=35.00 Aligned_cols=88 Identities=7% Similarity=0.040 Sum_probs=54.6
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
...+.+.|+.|.+.+.|.........++|||.+||- ||.++..... ++ +.-..-.+.++.. +.. .+.+.|.
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~P-vI~~~~~~~~----e~-~~~~~~g~~~~~~-~~~--~~~~~l~ 325 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGTP-VVAFDVGGIP----DI-VDHGVTGYLAKPG-DPE--DLAEGIE 325 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCCC-EEEecCCCCh----hh-eeCCCceEEeCCC-CHH--HHHHHHH
Confidence 345778899999999998766666789999999985 6666542211 11 2222345556552 333 4444443
Q ss_pred CC--CHHHHHHHHHHHhhh
Q 016487 333 KI--PRERVERMRKKVIDL 349 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~~ 349 (388)
.+ .++...+|.++....
T Consensus 326 ~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 326 WLLADPDEREELGEAAREL 344 (365)
T ss_pred HHHhCHHHHHHHHHHHHHH
Confidence 32 356677777776653
No 37
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=87.97 E-value=4.2 Score=39.18 Aligned_cols=41 Identities=22% Similarity=0.352 Sum_probs=30.8
Q ss_pred hhHHHhhhcCeeeEecCCC-CCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGD-SFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd-~~~~~rl~dai~~GCIPVii~d~ 295 (388)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~ 300 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDN 300 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecC
Confidence 4567788888888887644 344456999999999 7887765
No 38
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=87.19 E-value=8.9 Score=36.70 Aligned_cols=94 Identities=7% Similarity=0.042 Sum_probs=55.3
Q ss_pred hhhHHHhhhcCeeeEecCCC------CCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccch
Q 016487 253 PSEILGVMSKSQFCLQAPGD------SFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRR 326 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd------~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~ 326 (388)
..+..+.|+++.+++.|... ......++||+.+||-.|. ++.... -++ +.-..-...++++ +.. +
T Consensus 246 ~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~-~~~~~~----~~~-i~~~~~g~~~~~~-~~~--~ 316 (355)
T cd03799 246 QEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVIS-TDVSGI----PEL-VEDGETGLLVPPG-DPE--A 316 (355)
T ss_pred hHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEe-cCCCCc----chh-hhCCCceEEeCCC-CHH--H
Confidence 35788999999999998654 3345679999999986554 544211 011 2222234555552 333 4
Q ss_pred HHHHHcCC--CHHHHHHHHHHHhh-hcCceEe
Q 016487 327 IEDELMKI--PRERVERMRKKVID-LIPRVTY 355 (388)
Q Consensus 327 l~~~L~~i--~~~~~~~mr~~l~~-~~~~~~y 355 (388)
+.+.|..+ .+++..+|.++..+ +...|.|
T Consensus 317 l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 317 LADAIERLLDDPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCH
Confidence 54444433 35667778777665 3344544
No 39
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=87.13 E-value=5.3 Score=41.14 Aligned_cols=90 Identities=11% Similarity=0.124 Sum_probs=54.5
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC---CCCC-----ceEEEEeCCCCCccc
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP---QDAE-----EYSVYINGENGNATR 325 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP---idw~-----~fsV~i~~~~~~~~~ 325 (388)
....+.++.|.+++.|.-..+..-.+.|||.+||.||. ++.. -++ .|.. ...+.+++. +..
T Consensus 357 ~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~g-------g~~e~v~~~~~~~~~~~G~l~~~~-d~~-- 425 (473)
T TIGR02095 357 ALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTG-------GLADTVVDGDPEAESGTGFLFEEY-DPG-- 425 (473)
T ss_pred HHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCC-------CccceEecCCCCCCCCceEEeCCC-CHH--
Confidence 34567899999999998777776778999999996665 4431 122 2321 445666652 333
Q ss_pred hHHHHHcCC------CHHHHHHHHHHHhhhcCceEec
Q 016487 326 RIEDELMKI------PRERVERMRKKVIDLIPRVTYK 356 (388)
Q Consensus 326 ~l~~~L~~i------~~~~~~~mr~~l~~~~~~~~y~ 356 (388)
.+.+.|..+ .++.+.+|.++.. ...|.|.
T Consensus 426 ~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~ 460 (473)
T TIGR02095 426 ALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWD 460 (473)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcH
Confidence 444444332 4566677766653 2344443
No 40
>PRK00654 glgA glycogen synthase; Provisional
Probab=87.13 E-value=6.5 Score=40.52 Aligned_cols=83 Identities=6% Similarity=-0.001 Sum_probs=50.7
Q ss_pred HHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCC-----ceEEEEeCCCCCccchHHHH
Q 016487 256 ILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAE-----EYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 256 y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~-----~fsV~i~~~~~~~~~~l~~~ 330 (388)
....++.|.+++.|.=..+..-.+.|||.+||+||+-.-.-. -+.-.|.. .-.+.++.. +.. .+.+.
T Consensus 350 ~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~-----~e~v~~~~~~~~~~~G~lv~~~-d~~--~la~~ 421 (466)
T PRK00654 350 AHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGL-----ADTVIDYNPEDGEATGFVFDDF-NAE--DLLRA 421 (466)
T ss_pred HHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCc-----cceeecCCCCCCCCceEEeCCC-CHH--HHHHH
Confidence 457789999999998666666779999999998887532210 01102321 345666663 433 55554
Q ss_pred HcCC-----CHHHHHHHHHHH
Q 016487 331 LMKI-----PRERVERMRKKV 346 (388)
Q Consensus 331 L~~i-----~~~~~~~mr~~l 346 (388)
|..+ .++.+.+|.++.
T Consensus 422 i~~~l~~~~~~~~~~~~~~~~ 442 (466)
T PRK00654 422 LRRALELYRQPPLWRALQRQA 442 (466)
T ss_pred HHHHHHHhcCHHHHHHHHHHH
Confidence 4432 345566666655
No 41
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=87.09 E-value=4 Score=40.24 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=30.3
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEec
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSR 294 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d 294 (388)
.+.+.++.+..++.|.........+.|||++| +|||.++
T Consensus 250 ~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~ 288 (359)
T PRK09922 250 VVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSD 288 (359)
T ss_pred HHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeC
Confidence 45666778888888876555556799999999 6888887
No 42
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=86.91 E-value=8.1 Score=36.13 Aligned_cols=82 Identities=11% Similarity=0.039 Sum_probs=48.4
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchH---HHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRI---EDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l---~~~ 330 (388)
.+..+.+..|.+++.|.-.......++||+.+||. ||.+|.... -++ +.-....+.++.+ +.. .+ .+.
T Consensus 255 ~~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~P-vI~~~~~~~----~e~-i~~~~~g~~~~~~-~~~--~~~~~~~~ 325 (353)
T cd03811 255 SNPYPYLKAADLFVLSSRYEGFPNVLLEAMALGTP-VVATDCPGP----REI-LEDGENGLLVPVG-DEA--ALAAAALA 325 (353)
T ss_pred CCHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCCC-EEEcCCCCh----HHH-hcCCCceEEECCC-CHH--HHHHHHHH
Confidence 34568899999999997655555679999999985 555654211 011 3333445566663 333 43 233
Q ss_pred H-cCCC-HHHHHHHHH
Q 016487 331 L-MKIP-RERVERMRK 344 (388)
Q Consensus 331 L-~~i~-~~~~~~mr~ 344 (388)
+ .... ++...+|.+
T Consensus 326 i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 326 LLDLLLDPELRERLAA 341 (353)
T ss_pred HHhccCChHHHHHHHH
Confidence 3 3222 455566666
No 43
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=86.30 E-value=0.82 Score=44.63 Aligned_cols=41 Identities=15% Similarity=0.283 Sum_probs=32.5
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
..+..+.|+.+..++.|.-.+.+ -.++|||++|| |||.++.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~e~~g-~~~~Eama~G~-Pvi~~~~ 292 (351)
T cd03804 252 DEELRDLYARARAFLFPAEEDFG-IVPVEAMASGT-PVIAYGK 292 (351)
T ss_pred HHHHHHHHHhCCEEEECCcCCCC-chHHHHHHcCC-CEEEeCC
Confidence 35678899999999988654443 45799999998 9999875
No 44
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=86.23 E-value=6.9 Score=40.44 Aligned_cols=88 Identities=10% Similarity=0.060 Sum_probs=54.7
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCC-----CceEEEEeCCCCCccchH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDA-----EEYSVYINGENGNATRRI 327 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw-----~~fsV~i~~~~~~~~~~l 327 (388)
..+..+.|..+..++.|.-.......++|||++|| |||.+|..... ++--+. ....+.++.. +.. .+
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~~----elv~~~~~~~~g~~G~lv~~~-d~~--~l 432 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSCR----ELIEGADDEALGPAGEVVPPA-DPE--AL 432 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCChH----HHhcCCcccccCCceEEECCC-CHH--HH
Confidence 44667888899998888643334456999999999 88888753211 110121 1355666662 433 45
Q ss_pred HHHHcCC--CHHHHHHHHHHHhh
Q 016487 328 EDELMKI--PRERVERMRKKVID 348 (388)
Q Consensus 328 ~~~L~~i--~~~~~~~mr~~l~~ 348 (388)
.+.+..+ .++...+|.++.++
T Consensus 433 a~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 433 ARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Confidence 4444432 46778888877765
No 45
>PRK14098 glycogen synthase; Provisional
Probab=86.08 E-value=7.8 Score=40.42 Aligned_cols=42 Identities=12% Similarity=0.006 Sum_probs=34.6
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
....+.|+.|.+++.|.-..+..-...|||++||+||+....
T Consensus 373 ~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~G 414 (489)
T PRK14098 373 AFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGG 414 (489)
T ss_pred HHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCC
Confidence 345778999999999987777667789999999999987643
No 46
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=86.00 E-value=2 Score=41.09 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=32.8
Q ss_pred hhHHHhhhcCeeeEecCC-CCCCcchHHHHHhhCCeeEEEecCc
Q 016487 254 SEILGVMSKSQFCLQAPG-DSFTRRSTFDSVLAGCIPVFFSRHT 296 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~G-d~~~~~rl~dai~~GCIPVii~d~~ 296 (388)
.+..+.|+.+.+++.|.- .......++|||++|+ |||.+|..
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~~~~lEAma~G~-PvI~~~~~ 277 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFGLVMIEAMACGT-PVIAFRRG 277 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcchHHHHHHhcCC-CEEEeCCC
Confidence 356788999999999974 2333456999999997 99999863
No 47
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=84.66 E-value=2.1 Score=42.20 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=54.4
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
....+.|+.|.+++.|.......-.++|||.+| +|||.++.... -++=.+.. -.+.++.+ .. .+.+.+..
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~~----~e~i~~~~-~g~~~~~~--~~--~~a~~i~~ 360 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGGP----LETVVDGE-TGFLCEPT--PE--EFAEAMLK 360 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCCc----HHHhccCC-ceEEeCCC--HH--HHHHHHHH
Confidence 455788999999999876655555689999999 67777765310 11102332 23445442 22 33333332
Q ss_pred C--CHHHHHHHHHHHhh-hcCceEec
Q 016487 334 I--PRERVERMRKKVID-LIPRVTYK 356 (388)
Q Consensus 334 i--~~~~~~~mr~~l~~-~~~~~~y~ 356 (388)
+ .++...+|+++.++ +...|.|.
T Consensus 361 l~~~~~~~~~~~~~a~~~~~~~~s~~ 386 (392)
T cd03805 361 LANDPDLADRMGAAGRKRVKEKFSTE 386 (392)
T ss_pred HHhChHHHHHHHHHHHHHHHHhcCHH
Confidence 2 35667888777665 44555543
No 48
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=83.62 E-value=11 Score=36.00 Aligned_cols=93 Identities=11% Similarity=0.120 Sum_probs=56.8
Q ss_pred hhHHHhhhcCeeeEecC---CCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHH
Q 016487 254 SEILGVMSKSQFCLQAP---GDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~---Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.++.+.++.+..++.|. +.+.+ -.+.|||.+| +|||.++..... ++-.+.....+.++. ++.. .+.+.
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g-~~~~Ea~~~g-~Pvi~~~~~~~~----~~i~~~~~~g~~~~~-~d~~--~~~~~ 325 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFG-IVLLEAMAFG-KPVISTEIGTGG----SYVNLHGVTGLVVPP-GDPA--ALAEA 325 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccc-hHHHHHHHcC-CCEEecCCCCch----hHHhhCCCceEEeCC-CCHH--HHHHH
Confidence 45788999999999885 23333 3599999997 577777653211 110222445556655 2443 45555
Q ss_pred HcCC--CHHHHHHHHHHHhhhc-CceEe
Q 016487 331 LMKI--PRERVERMRKKVIDLI-PRVTY 355 (388)
Q Consensus 331 L~~i--~~~~~~~mr~~l~~~~-~~~~y 355 (388)
+..+ .+++..+|.++..+.. ++|.+
T Consensus 326 i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 326 IRRLLEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHHHHHCHHHHHHHHHHHHHHHHHhcch
Confidence 4443 4778888988887743 44443
No 49
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=82.52 E-value=9 Score=38.29 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=31.9
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
..+..+.++.+..++.|.-.......+.|||++|| |||.++.
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~ 301 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRV 301 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCC
Confidence 35788899999999988644344457999999998 5666664
No 50
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=81.05 E-value=10 Score=38.39 Aligned_cols=90 Identities=13% Similarity=0.128 Sum_probs=52.0
Q ss_pred hhhHHHhhhcCeeeEecC----CCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHH
Q 016487 253 PSEILGVMSKSQFCLQAP----GDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIE 328 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~----Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~ 328 (388)
..++.+.|..|..++.|. |.+. ...++|||++|+ |||.++.... -++ +.-..-.+.++..+++. +.|.
T Consensus 305 ~~~~~~~l~~aDv~v~~~~~~~~~~~-p~~~~Eama~G~-PVI~s~~~~~----~ei-v~~~~~G~lv~d~~~la-~~i~ 376 (415)
T cd03816 305 AEDYPKLLASADLGVSLHTSSSGLDL-PMKVVDMFGCGL-PVCALDFKCI----DEL-VKHGENGLVFGDSEELA-EQLI 376 (415)
T ss_pred HHHHHHHHHhCCEEEEccccccccCC-cHHHHHHHHcCC-CEEEeCCCCH----HHH-hcCCCCEEEECCHHHHH-HHHH
Confidence 467788899999887542 3332 446999999999 9999885310 011 32222233342112222 1333
Q ss_pred HHHcC-CCHHHHHHHHHHHhhhc
Q 016487 329 DELMK-IPRERVERMRKKVIDLI 350 (388)
Q Consensus 329 ~~L~~-i~~~~~~~mr~~l~~~~ 350 (388)
.+|.. .++++..+|.++.++..
T Consensus 377 ~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 377 DLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhh
Confidence 34442 12778888888877644
No 51
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=80.27 E-value=31 Score=32.90 Aligned_cols=141 Identities=14% Similarity=0.160 Sum_probs=80.9
Q ss_pred cCCCCCCceEEeecCCCCCCCchHHHHHHHHHHccCCce---eEee-eccCCCCCCCCCC-------hhhHHHhhhcCee
Q 016487 197 MRLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRC---KLLT-CRYGSGASNKCSS-------PSEILGVMSKSQF 265 (388)
Q Consensus 197 ~~~~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~---~~~~-~~~~~~~~~~~~~-------~~~y~~~m~~S~F 265 (388)
.+-++|.-.++|+|+...+ ..|+.|++...+.++. .+.. |.. ..|.. ...-.+...+-||
T Consensus 78 ~pW~~K~~~a~WRG~~~~~----~~R~~Lv~~~~~~p~~~da~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~yKy 148 (256)
T smart00672 78 TKWSDKNAYAYWRGNPTVA----SERLDLIKCNQSSPELVNARITIQDWP-----GKCDGEEDAPGFKKSPLEEQCKHKY 148 (256)
T ss_pred CCccccCcCccccCCCCCC----cchHHHHHHhcCCcccceeEEEEecCC-----CCChHHhcccCcCCCCHHHHhhcce
Confidence 3556788899999998632 3899999887776532 2322 111 01211 1122455577899
Q ss_pred eEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCC--CHHHHHHHH
Q 016487 266 CLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKI--PRERVERMR 343 (388)
Q Consensus 266 CL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i--~~~~~~~mr 343 (388)
=+...|.+.+. ||.=-|.+++|++..... |.+|-.+.=..|.-| |-|.. +....+|.++++=+ .+++.+++-
T Consensus 149 li~~dG~~~S~-rl~~~l~~~Svvl~~~~~--~~~~~~~~L~P~~HY-vPv~~--d~sd~~l~~~i~~~~~~~~~a~~Ia 222 (256)
T smart00672 149 KINIEGVAWSV-RLKYILACDSVVLKVKPE--YYEFFSRGLQPWVHY-WPIKS--DLSCRELKEAVDWGNEHDKKAQEIG 222 (256)
T ss_pred EEecCCccchh-hHHHHHhcCceEEEeCCc--hhHHHHhcccCccce-EEeeC--CCchhhHHHHHHHHHhCHHHHHHHH
Confidence 99999998775 688899999998888754 233211211455554 23333 22200155555421 355555665
Q ss_pred HHHhhhcCc
Q 016487 344 KKVIDLIPR 352 (388)
Q Consensus 344 ~~l~~~~~~ 352 (388)
++..+.+..
T Consensus 223 ~~~~~~~~~ 231 (256)
T smart00672 223 KRGSEFIQQ 231 (256)
T ss_pred HHHHHHHHH
Confidence 566554444
No 52
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=80.08 E-value=3.4 Score=42.17 Aligned_cols=93 Identities=5% Similarity=0.047 Sum_probs=51.3
Q ss_pred hHHHhhhcC----eeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHH
Q 016487 255 EILGVMSKS----QFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 255 ~y~~~m~~S----~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
+..+.|+.+ ...+.|.-.......+.|||++|| |||.++.... -++ ++-..-.+.++.. +.. .+.+.
T Consensus 329 ~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg~----~ei-v~~~~~G~lv~~~-d~~--~la~~ 399 (439)
T TIGR02472 329 DVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGGP----RDI-IANCRNGLLVDVL-DLE--AIASA 399 (439)
T ss_pred HHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCCc----HHH-hcCCCcEEEeCCC-CHH--HHHHH
Confidence 344555544 333445433333446999999999 9999986311 011 3333445667663 333 44444
Q ss_pred HcCC--CHHHHHHHHHHHhh-hcCceEec
Q 016487 331 LMKI--PRERVERMRKKVID-LIPRVTYK 356 (388)
Q Consensus 331 L~~i--~~~~~~~mr~~l~~-~~~~~~y~ 356 (388)
+..+ .++...+|.++.++ +..+|.|.
T Consensus 400 i~~ll~~~~~~~~~~~~a~~~~~~~fsw~ 428 (439)
T TIGR02472 400 LEDALSDSSQWQLWSRNGIEGVRRHYSWD 428 (439)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4332 45666777776654 44555544
No 53
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=78.42 E-value=20 Score=36.73 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=51.7
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC---CCCCc-----eEEEEeCCCCCccch
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP---QDAEE-----YSVYINGENGNATRR 326 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP---idw~~-----fsV~i~~~~~~~~~~ 326 (388)
.....++.+.+.+.|.-..+....+.|||++||.||.-.-. -++ .|... -.+.++.. +.. .
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~g--------g~~e~v~~~~~~~~~~~G~~~~~~-~~~--~ 431 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATG--------GLADTVIDYNEDTGEGTGFVFEGY-NAD--A 431 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCC--------CccceEeCCcCCCCCCCeEEeCCC-CHH--H
Confidence 44678899999999987777777789999999998764433 122 33321 35556652 333 4
Q ss_pred HHHHHcCC-----CHHHHHHHHHHHh
Q 016487 327 IEDELMKI-----PRERVERMRKKVI 347 (388)
Q Consensus 327 l~~~L~~i-----~~~~~~~mr~~l~ 347 (388)
+.+.|..+ .++...+|.++..
T Consensus 432 l~~~i~~~l~~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 432 LLAALRRALALYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHh
Confidence 55444432 2566667766653
No 54
>PHA01630 putative group 1 glycosyl transferase
Probab=78.24 E-value=4.2 Score=40.13 Aligned_cols=41 Identities=7% Similarity=0.152 Sum_probs=31.3
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
.+..+.|+.+..++.|.-.....--+.|||++|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 5678889999999998644433455899999998 6666664
No 55
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=77.22 E-value=6.8 Score=39.58 Aligned_cols=91 Identities=15% Similarity=0.187 Sum_probs=50.8
Q ss_pred hhHHHhhhcCe--eeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHH
Q 016487 254 SEILGVMSKSQ--FCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 254 ~~y~~~m~~S~--FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~ 329 (388)
.+..+.++.+. ..+.|.-.....-.+.|||++|+ |||.++-. -.| ++-..-.+.++..++.. .+.+
T Consensus 300 ~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~-PVIas~vg-------g~~e~i~~~~~G~l~~~~~~~~--~la~ 369 (407)
T cd04946 300 SEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGI-PVIATNVG-------GTPEIVDNGGNGLLLSKDPTPN--ELVS 369 (407)
T ss_pred HHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCC-CEEeCCCC-------CcHHHhcCCCcEEEeCCCCCHH--HHHH
Confidence 34556666532 23334333334456999999995 99988753 222 33333345555421223 4555
Q ss_pred HHcCC--CHHHHHHHHHHHhhhc-CceE
Q 016487 330 ELMKI--PRERVERMRKKVIDLI-PRVT 354 (388)
Q Consensus 330 ~L~~i--~~~~~~~mr~~l~~~~-~~~~ 354 (388)
.|..+ ++++..+|+++.++.+ .+|.
T Consensus 370 ~I~~ll~~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 370 SLSKFIDNEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHcC
Confidence 44443 4788888988877643 4443
No 56
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=76.38 E-value=2.6 Score=44.82 Aligned_cols=115 Identities=12% Similarity=0.187 Sum_probs=69.2
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCC------CCCccchH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGE------NGNATRRI 327 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~------~~~~~~~l 327 (388)
..|.+.++.+.-++.|.-..+...-..||+++| +|||.++..-+..|.-+.-.+-.+..|.|... +.+. .|
T Consensus 466 ~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G-~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~--~L 542 (590)
T cd03793 466 LDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG-IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQ--QL 542 (590)
T ss_pred cchHHHhhhceEEEeccccCCCCcHHHHHHHcC-CCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHH--HH
Confidence 468999999999999987676666789999999 59999987432211111102333567777531 1122 33
Q ss_pred HHHHcC---CCHHHHHHHHHHHhhhcCceEecCCCCCCCCCcccHHHHHHH
Q 016487 328 EDELMK---IPRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVA 375 (388)
Q Consensus 328 ~~~L~~---i~~~~~~~mr~~l~~~~~~~~y~~~~~~~~~~~~DAf~~~~~ 375 (388)
.+.|.. .+..+....|....+....|.|..-.. -|..|.+.+++
T Consensus 543 a~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~----~Y~~A~~~Al~ 589 (590)
T cd03793 543 TQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGR----YYRKARQLALS 589 (590)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHH----HHHHHHHHHhh
Confidence 333333 233333333433447888888887644 24567776653
No 57
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=76.16 E-value=5.6 Score=39.78 Aligned_cols=90 Identities=7% Similarity=0.140 Sum_probs=53.9
Q ss_pred hHHHhhhcCeeeEecC--CCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHc
Q 016487 255 EILGVMSKSQFCLQAP--GDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~--Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
+....++.+..++.|. |.+.. ..+.|||.+|| |||.++... ..+... ..-.+.++.+ .. .+.+.+.
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~~-~~~lEAma~G~-PVV~t~~~~-----~~i~~~-~~~g~lv~~~--~~--~la~ai~ 357 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGIQ-NKVLEAMAMAK-PVVASPEAA-----EGIDAL-PGAELLVAAD--PA--DFAAAIL 357 (397)
T ss_pred CHHHHHHhCCEEEecccccCCcc-cHHHHHHHcCC-CEEecCccc-----cccccc-CCcceEeCCC--HH--HHHHHHH
Confidence 4677889999999885 44433 35999999998 999987421 111111 2234455532 22 4444433
Q ss_pred CC--CHHHHHHHHHHHhh-hcCceEec
Q 016487 333 KI--PRERVERMRKKVID-LIPRVTYK 356 (388)
Q Consensus 333 ~i--~~~~~~~mr~~l~~-~~~~~~y~ 356 (388)
.+ .++...+|.++.++ +...|.|.
T Consensus 358 ~ll~~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 358 ALLANPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 32 46677888887765 34556554
No 58
>PRK14099 glycogen synthase; Provisional
Probab=76.14 E-value=7.6 Score=40.47 Aligned_cols=91 Identities=13% Similarity=0.138 Sum_probs=56.1
Q ss_pred hhHHHhh-hcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC---CCCC--------ceEEEEeCCCC
Q 016487 254 SEILGVM-SKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP---QDAE--------EYSVYINGENG 321 (388)
Q Consensus 254 ~~y~~~m-~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP---idw~--------~fsV~i~~~~~ 321 (388)
.+....+ +.|.+.+.|.=..+..-...|||++||+||+-.-. -++ .|.. .-.+.++.. +
T Consensus 360 ~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~G--------Gl~d~V~~~~~~~~~~~~~~G~l~~~~-d 430 (485)
T PRK14099 360 EALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVG--------GLADTVVDANEMAIATGVATGVQFSPV-T 430 (485)
T ss_pred HHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCC--------CccceeecccccccccCCCceEEeCCC-C
Confidence 3445555 46888888876777667789999999999884322 122 3432 345666663 4
Q ss_pred CccchHHHHHcC----C-CHHHHHHHHHHHhhhcCceEecC
Q 016487 322 NATRRIEDELMK----I-PRERVERMRKKVIDLIPRVTYKH 357 (388)
Q Consensus 322 ~~~~~l~~~L~~----i-~~~~~~~mr~~l~~~~~~~~y~~ 357 (388)
.. .|.+.|.. + .++.+.+|+++.. ...|.|..
T Consensus 431 ~~--~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 431 AD--ALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred HH--HHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 33 55555442 2 4667777887764 34555544
No 59
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=75.34 E-value=16 Score=36.69 Aligned_cols=125 Identities=14% Similarity=0.231 Sum_probs=71.0
Q ss_pred CCCCceEEeecCCCCCCCchHHHHHHHHHHccCCceeE-eeeccCCCCCCCCCChhhHHHhhhcCeeeEecC---CCCCC
Q 016487 200 SKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKL-LTCRYGSGASNKCSSPSEILGVMSKSQFCLQAP---GDSFT 275 (388)
Q Consensus 200 ~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~---Gd~~~ 275 (388)
.+++.++.+.-.... ..-|.++++.+...-...+ -.|... ...+.......+.+..=||=|+-. -...-
T Consensus 194 ~k~~~~aw~vSnc~~----~~~R~~~~~~L~k~l~iD~YG~c~~~---~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYV 266 (372)
T KOG2619|consen 194 AKTKLAAWLVSNCIP----RSARLDYYKELMKHLEIDSYGECLRK---NANRDPSDCLLETLSHYKFYLAFENSNCEDYV 266 (372)
T ss_pred cccceeeeeccccCc----chHHHHHHHHHHhhCceeeccccccc---cccCCCCCcceeecccceEEEEecccCCcccc
Confidence 445555555555443 4567777777765522111 123210 012233445677888899999743 23344
Q ss_pred cchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCCCHHHHH
Q 016487 276 RRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVE 340 (388)
Q Consensus 276 ~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i~~~~~~ 340 (388)
+-.|+-|+.+|.|||+++... ++ -.+| .+--|.|+.-.. ++++.+.|+.+...+.+
T Consensus 267 TEKfw~al~~gsVPVvlg~~n-~e---~fvP---~~SfI~vdDF~s--~~ela~ylk~L~~n~~~ 322 (372)
T KOG2619|consen 267 TEKFWNALDAGSVPVVLGPPN-YE---NFVP---PDSFIHVDDFQS--PQELAAYLKKLDKNPAA 322 (372)
T ss_pred cHHHHhhhhcCcccEEECCcc-cc---ccCC---CcceEehhhcCC--HHHHHHHHHHhhcCHHH
Confidence 566899999999999999842 11 1233 333345544222 45888888887544433
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=75.28 E-value=30 Score=36.24 Aligned_cols=95 Identities=7% Similarity=0.099 Sum_probs=50.7
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCC---CCCc--cchHHH
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGE---NGNA--TRRIED 329 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~---~~~~--~~~l~~ 329 (388)
+..+.+..+.-++.|.=.......+.|||++|| |||.+|-. +.. -++ +.-..-.+.++.. .+.. +..+.+
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~-~G~--~ei-I~~g~nG~lv~~~~~~~d~~~~~~~la~ 459 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVN-YGN--PTF-IEDNKNGYLIPIDEEEDDEDQIITALAE 459 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCC-CCC--HHH-ccCCCCEEEEeCCccccchhHHHHHHHH
Confidence 456677777777776643444456999999997 77777631 000 011 3223333444410 1110 012222
Q ss_pred HHcC-CCHHHHHHHHHHHhhhcCceE
Q 016487 330 ELMK-IPRERVERMRKKVIDLIPRVT 354 (388)
Q Consensus 330 ~L~~-i~~~~~~~mr~~l~~~~~~~~ 354 (388)
.+.. +.++...+|.++..+.+..|.
T Consensus 460 ~I~~ll~~~~~~~~~~~a~~~a~~fs 485 (500)
T TIGR02918 460 KIVEYFNSNDIDAFHEYSYQIAEGFL 485 (500)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHhcC
Confidence 2211 246678889888887777655
No 61
>PRK10307 putative glycosyl transferase; Provisional
Probab=72.64 E-value=5.2 Score=40.11 Aligned_cols=94 Identities=5% Similarity=0.008 Sum_probs=59.3
Q ss_pred hhhHHHhhhcCeeeEecCCCCC----CcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccch
Q 016487 253 PSEILGVMSKSQFCLQAPGDSF----TRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRR 326 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~----~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~ 326 (388)
..+..+.|+.|..++.|.=... ....++|+|++| +|||.++... ..++ +. .-.+.++. .+.. +
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g-----~~~~~~i~--~~G~~~~~-~d~~--~ 362 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPG-----TELGQLVE--GIGVCVEP-ESVE--A 362 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCC-----chHHHHHh--CCcEEeCC-CCHH--H
Confidence 3567888999999888742221 233589999999 6888886421 1112 34 34666666 3444 6
Q ss_pred HHHHHcCC--CHHHHHHHHHHHhh-hcCceEecC
Q 016487 327 IEDELMKI--PRERVERMRKKVID-LIPRVTYKH 357 (388)
Q Consensus 327 l~~~L~~i--~~~~~~~mr~~l~~-~~~~~~y~~ 357 (388)
+.+.|..+ .++...+|+++..+ +..+|.|..
T Consensus 363 la~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 396 (412)
T PRK10307 363 LVAAIAALARQALLRPKLGTVAREYAERTLDKEN 396 (412)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHH
Confidence 66666554 46677888888776 344566543
No 62
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=70.61 E-value=46 Score=33.85 Aligned_cols=141 Identities=9% Similarity=0.138 Sum_probs=78.3
Q ss_pred CCCCCCceEEeecCCCCCCCchHHHHHHHHHHccCCce---eEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecCCCCC
Q 016487 198 RLSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRC---KLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPGDSF 274 (388)
Q Consensus 198 ~~~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~Gd~~ 274 (388)
+-.+|.-.++|+|+... +..|+.|++.-.+.++. .+..-... ....-.....-.+...+-+|=+...|.++
T Consensus 153 pW~~K~p~afWRG~~~~----~~~R~~L~~~~~~~~~~~~a~i~~~d~~--~~~~~~~~~~~l~~~~~yKYli~idG~~~ 226 (395)
T PF05686_consen 153 PWEDKKPKAFWRGSPTV----AETRQRLVRCSRSHPDLWDARITKQDWD--KEYKPGFKHVPLEDQCKYKYLIYIDGNAW 226 (395)
T ss_pred ChhhcccceEECCCcCC----CcchhHHHHHhccCCccceeeechhhhh--hhccccccccCHHHHhhhheeecCCCcee
Confidence 44668888999999763 34799998765544321 12211100 00000111223555678888899999987
Q ss_pred CcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCCC--HHHHHHHHHHHhhhc
Q 016487 275 TRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIP--RERVERMRKKVIDLI 350 (388)
Q Consensus 275 ~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i~--~~~~~~mr~~l~~~~ 350 (388)
+. |+.=-|.+|++.+..... |.+|-.+.=..|.-|. -|..+++.. +|.+.++=.. +++.+++-++..+.+
T Consensus 227 S~-RlkylL~c~SvVl~~~~~--~~e~f~~~L~P~vHYV-PV~~~~d~s--dL~~~v~w~~~~~~~A~~IA~~g~~f~ 298 (395)
T PF05686_consen 227 SG-RLKYLLACNSVVLKVKSP--YYEFFYRALKPWVHYV-PVKRDDDLS--DLEEKVEWLNAHDDEAQRIAENGQRFA 298 (395)
T ss_pred eh-hHHHHHcCCceEEEeCCc--HHHHHHhhhcccccEE-Eeccccchh--hHHHHhhhcccChHHHHHHHHHHHHHH
Confidence 64 688888899988777543 3332112115666553 344422444 6666654332 455555555555433
No 63
>PLN02949 transferase, transferring glycosyl groups
Probab=70.55 E-value=54 Score=33.98 Aligned_cols=94 Identities=10% Similarity=0.138 Sum_probs=51.8
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCC-ceEEEEeCCCCCccchHHHHHc
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAE-EYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~-~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
.+..+.|++|.+++.|.-+...-.-+.|||++||+||.....- +. .++-.++. .-.-++.++ .. .+.+.+.
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gG---p~-~eIV~~~~~g~tG~l~~~--~~--~la~ai~ 417 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAG---PK-MDIVLDEDGQQTGFLATT--VE--EYADAIL 417 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCC---Cc-ceeeecCCCCcccccCCC--HH--HHHHHHH
Confidence 5677888999988877543333346999999998777765331 00 01101111 111111121 22 3333333
Q ss_pred C---CCHHHHHHHHHHHhhhcCceEe
Q 016487 333 K---IPRERVERMRKKVIDLIPRVTY 355 (388)
Q Consensus 333 ~---i~~~~~~~mr~~l~~~~~~~~y 355 (388)
. .++++..+|+++.++....|.+
T Consensus 418 ~ll~~~~~~r~~m~~~ar~~~~~FS~ 443 (463)
T PLN02949 418 EVLRMRETERLEIAAAARKRANRFSE 443 (463)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHcCH
Confidence 3 2567778888888776565553
No 64
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=67.93 E-value=45 Score=31.88 Aligned_cols=42 Identities=7% Similarity=-0.027 Sum_probs=33.3
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
..+..+.+.++.++++|.-.......+.|||.+||-. |.++.
T Consensus 257 ~~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~Pv-I~s~~ 298 (358)
T cd03812 257 RNDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGLPC-ILSDT 298 (358)
T ss_pred cCCHHHHHHhcCEEEecccccCCCHHHHHHHHhCCCE-EEEcC
Confidence 3467889999999999986666677899999999855 45553
No 65
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=67.88 E-value=47 Score=33.30 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=49.4
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC----CCCCceEEEEeCCCCCccchHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP----QDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP----idw~~fsV~i~~~~~~~~~~l~~ 329 (388)
.+..+.|+.|.+++..+|. ..+.||+.+|+ |||+.+... .| +.- +.-..+++.+...+++. ..|.+
T Consensus 265 ~~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~p-gq---e~~N~~~~~~~G~g~~~~~~~~l~-~~i~~ 334 (391)
T PRK13608 265 KHMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPAP-GQ---ELENALYFEEKGFGKIADTPEEAI-KIVAS 334 (391)
T ss_pred chHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCCC-Cc---chhHHHHHHhCCcEEEeCCHHHHH-HHHHH
Confidence 3567889999999885542 24899999985 888876421 00 110 11223444432211221 12333
Q ss_pred HHcCCCHHHHHHHHHHHhhhcC
Q 016487 330 ELMKIPRERVERMRKKVIDLIP 351 (388)
Q Consensus 330 ~L~~i~~~~~~~mr~~l~~~~~ 351 (388)
+|. .++.+.+|+++..+...
T Consensus 335 ll~--~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 335 LTN--GNEQLTNMISTMEQDKI 354 (391)
T ss_pred Hhc--CHHHHHHHHHHHHHhcC
Confidence 333 47888999999876544
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=66.58 E-value=7.3 Score=38.69 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=34.2
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
.+..+.++.|.+.+.|.-......-+.|||++|| |||.++-
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 4567889999999988766666667999999999 9999876
No 67
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=62.23 E-value=50 Score=28.79 Aligned_cols=41 Identities=7% Similarity=0.057 Sum_probs=31.5
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
..+...+..|..++.|.........++|||.+|| |||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 4455556569999999987777888999999976 5555654
No 68
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=62.22 E-value=1.2e+02 Score=30.94 Aligned_cols=134 Identities=9% Similarity=0.144 Sum_probs=79.0
Q ss_pred CCCCCceEEeecCCCCCCCchHHHHHHHHHHccCCceeEeeeccCCCCC------CCCCChhhHHHhhhcCeeeEecCCC
Q 016487 199 LSKRPHLFSFVGAPRKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGAS------NKCSSPSEILGVMSKSQFCLQAPGD 272 (388)
Q Consensus 199 ~~~R~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~y~~~m~~S~FCL~P~Gd 272 (388)
...|+.+.+-.|+.... ..+=+.+.+.|.+.+..+++.-....... ..-.+.....+.+.+|.=-.+..|.
T Consensus 234 ~~d~~~vyvslGt~~~~---~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p~~~~l~~ad~vI~hGG~ 310 (406)
T COG1819 234 PADRPIVYVSLGTVGNA---VELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELLPRADAVIHHGGA 310 (406)
T ss_pred cCCCCeEEEEcCCcccH---HHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCCHHHHhhhcCEEEecCCc
Confidence 56688888888877532 34555667788887765555432200000 0001123457788888888887776
Q ss_pred CCCcchHHHHHhhCCeeEEEecCccccccccccC-----CCCCceEEEEeCCCCCccchHHHHHcCC-CHHHHHHHHHHH
Q 016487 273 SFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP-----QDAEEYSVYINGENGNATRRIEDELMKI-PRERVERMRKKV 346 (388)
Q Consensus 273 ~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP-----idw~~fsV~i~~~~~~~~~~l~~~L~~i-~~~~~~~mr~~l 346 (388)
+ .+.+||.+| ||+|+-... ++-| +.+....+.++- +....+.|.+.++.+ .++.+.+-.+++
T Consensus 311 g----tt~eaL~~g-vP~vv~P~~------~DQ~~nA~rve~~G~G~~l~~-~~l~~~~l~~av~~vL~~~~~~~~~~~~ 378 (406)
T COG1819 311 G----TTSEALYAG-VPLVVIPDG------ADQPLNAERVEELGAGIALPF-EELTEERLRAAVNEVLADDSYRRAAERL 378 (406)
T ss_pred c----hHHHHHHcC-CCEEEecCC------cchhHHHHHHHHcCCceecCc-ccCCHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6 358899888 788887553 3444 456677777776 344445666666654 344444444444
Q ss_pred h
Q 016487 347 I 347 (388)
Q Consensus 347 ~ 347 (388)
.
T Consensus 379 ~ 379 (406)
T COG1819 379 A 379 (406)
T ss_pred H
Confidence 3
No 69
>PLN02939 transferase, transferring glycosyl groups
Probab=60.96 E-value=20 Score=40.42 Aligned_cols=92 Identities=8% Similarity=0.017 Sum_probs=55.7
Q ss_pred HHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCC--------ceEEEEeCCCCCccchHH
Q 016487 257 LGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAE--------EYSVYINGENGNATRRIE 328 (388)
Q Consensus 257 ~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~--------~fsV~i~~~~~~~~~~l~ 328 (388)
...++.|.+++.|.=..+..-.+.+||++||+||+..-.-. -+.=.|++ .-.+.++.. +.. .+.
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL-----~DtV~d~d~e~i~~eg~NGfLf~~~-D~e--aLa 922 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL-----NDSVFDFDDETIPVELRNGFTFLTP-DEQ--GLN 922 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC-----cceeecCCccccccCCCceEEecCC-CHH--HHH
Confidence 46899999999998777777779999999999997643310 01102332 224445542 332 444
Q ss_pred HHHcC----C--CHHHHHHHHHHHhhhcCceEecCC
Q 016487 329 DELMK----I--PRERVERMRKKVIDLIPRVTYKHP 358 (388)
Q Consensus 329 ~~L~~----i--~~~~~~~mr~~l~~~~~~~~y~~~ 358 (388)
+.|.. + .++.+.+|+++. +...|.|...
T Consensus 923 ~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~ 956 (977)
T PLN02939 923 SALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSS 956 (977)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHH
Confidence 33322 2 467788887754 3355665544
No 70
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=60.83 E-value=52 Score=32.11 Aligned_cols=89 Identities=11% Similarity=0.154 Sum_probs=50.7
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCc--cccccc-cccCCCCCceEEEEeCCCCCccchHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHT--AYTQYM-WYLPQDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~--~~~~y~-~~lPidw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.++.+.|..+..++...| ...++|||.+|+--|.+.... ...|.. -+. +--....+.++.+ ++.++.|.+.
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~-i~~~~~g~~~~~~-~~~~~~l~~~ 317 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARA-LVDAGAALLIPQS-DLTPEKLAEK 317 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHH-HHHCCCEEEEEcc-cCCHHHHHHH
Confidence 367889999999998776 234899999997555443210 000100 000 2123456677763 4333355555
Q ss_pred HcCC--CHHHHHHHHHHHhh
Q 016487 331 LMKI--PRERVERMRKKVID 348 (388)
Q Consensus 331 L~~i--~~~~~~~mr~~l~~ 348 (388)
+..+ .++...+|+++..+
T Consensus 318 i~~ll~~~~~~~~~~~~~~~ 337 (357)
T PRK00726 318 LLELLSDPERLEAMAEAARA 337 (357)
T ss_pred HHHHHcCHHHHHHHHHHHHh
Confidence 5543 36677788887643
No 71
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=59.91 E-value=38 Score=33.73 Aligned_cols=84 Identities=11% Similarity=0.206 Sum_probs=47.3
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC-CCCCceEEEEeCCCCCccchHHHHHcC
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP-QDAEEYSVYINGENGNATRRIEDELMK 333 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP-idw~~fsV~i~~~~~~~~~~l~~~L~~ 333 (388)
+..+.|+.|...+.++| +. .+.|||.+|+ |||+.+...-.+. --.+ +--....+.+ .+ .. .|.+.+..
T Consensus 275 ~~~~l~~aaDv~V~~~g--~~--ti~EAma~g~-PvI~~~~~pgqe~-gn~~~i~~~g~g~~~-~~--~~--~la~~i~~ 343 (382)
T PLN02605 275 NMEEWMGACDCIITKAG--PG--TIAEALIRGL-PIILNGYIPGQEE-GNVPYVVDNGFGAFS-ES--PK--EIARIVAE 343 (382)
T ss_pred cHHHHHHhCCEEEECCC--cc--hHHHHHHcCC-CEEEecCCCccch-hhHHHHHhCCceeec-CC--HH--HHHHHHHH
Confidence 57889999999888776 23 3899999997 7777663110000 0001 1113344443 21 11 34444332
Q ss_pred C---CHHHHHHHHHHHhhh
Q 016487 334 I---PRERVERMRKKVIDL 349 (388)
Q Consensus 334 i---~~~~~~~mr~~l~~~ 349 (388)
+ .++..++|+++.++.
T Consensus 344 ll~~~~~~~~~m~~~~~~~ 362 (382)
T PLN02605 344 WFGDKSDELEAMSENALKL 362 (382)
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 2 267788888887643
No 72
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=57.58 E-value=19 Score=41.07 Aligned_cols=92 Identities=10% Similarity=0.144 Sum_probs=54.4
Q ss_pred hHHHhhhcC-----eeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHH
Q 016487 255 EILGVMSKS-----QFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 255 ~y~~~m~~S-----~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~ 329 (388)
+..+.|+.+ .|++ |.=..+..--+.|||++|+ |||.++.... -++ +.-..-.+.|+.. +.. .|.+
T Consensus 560 dvp~lYr~Ad~s~DVFV~-PS~~EgFGLvlLEAMAcGl-PVVASdvGG~----~EI-I~~g~nGlLVdP~-D~e--aLA~ 629 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGL-PMVATKNGGP----VDI-HRVLDNGLLVDPH-DQQ--AIAD 629 (1050)
T ss_pred HHHHHHHHhhhcCCeeeC-CcccCCCCHHHHHHHHhCC-CEEEeCCCCc----HHH-hccCCcEEEECCC-CHH--HHHH
Confidence 445556554 4544 5433333356999999995 9999975310 111 3334456677763 443 5555
Q ss_pred HHcCC--CHHHHHHHHHHHhhhcCceEec
Q 016487 330 ELMKI--PRERVERMRKKVIDLIPRVTYK 356 (388)
Q Consensus 330 ~L~~i--~~~~~~~mr~~l~~~~~~~~y~ 356 (388)
.|..+ .++...+|.++..+..+.|.|.
T Consensus 630 AL~~LL~Dpelr~~m~~~gr~~v~~FSWe 658 (1050)
T TIGR02468 630 ALLKLVADKQLWAECRQNGLKNIHLFSWP 658 (1050)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHCCHH
Confidence 54433 4677888888877766666554
No 73
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=53.74 E-value=42 Score=35.86 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=33.2
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
.+....|+.+..++.|.-.......+.|||.+|| |||.++.
T Consensus 464 ~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdv 504 (578)
T PRK15490 464 RDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPA 504 (578)
T ss_pred hhHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCC
Confidence 4567778888888888656666677999999999 9999875
No 74
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=53.24 E-value=39 Score=34.08 Aligned_cols=105 Identities=8% Similarity=0.067 Sum_probs=57.2
Q ss_pred hhHHHhhhcCeeeEecCCC-CCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGD-SFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd-~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.+....|+.|..++++... ......+.||+.+|| |||.++...- .. ++. +.-..+.+. +. +.. .+.+.
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~-PVI~g~~~~~--~~-e~~~~~~~~g~~~~-~~--d~~--~La~~ 381 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGV-PVISGPHTFN--FK-EIFERLLQAGAAIQ-VE--DAE--DLAKA 381 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCC-CEEECCCccC--HH-HHHHHHHHCCCeEE-EC--CHH--HHHHH
Confidence 4678888999887775322 112234899999996 8888765210 00 111 112233333 22 222 34444
Q ss_pred HcCC--CHHHHHHHHHHHhhhcCceEecCCCCCCCCCcccHHHHHHHHHHHH
Q 016487 331 LMKI--PRERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALANH 380 (388)
Q Consensus 331 L~~i--~~~~~~~mr~~l~~~~~~~~y~~~~~~~~~~~~DAf~~~~~~l~~r 380 (388)
|..+ .++...+|.++..+..... .+|.+.+++.+.+-
T Consensus 382 l~~ll~~~~~~~~m~~~a~~~~~~~-------------~~~~~~~~~~l~~~ 420 (425)
T PRK05749 382 VTYLLTDPDARQAYGEAGVAFLKQN-------------QGALQRTLQLLEPY 420 (425)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhC-------------ccHHHHHHHHHHHh
Confidence 4332 4677788888776654321 25666666666543
No 75
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=51.35 E-value=17 Score=29.88 Aligned_cols=41 Identities=12% Similarity=0.141 Sum_probs=27.3
Q ss_pred hhHHHhhhcCeeeEecCC-CCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPG-DSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~G-d~~~~~rl~dai~~GCIPVii~d~ 295 (388)
.++.+.++++.+++.|.- +...+..++|++.+||-.| .++.
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~pvi-~~~~ 103 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGKPVI-ASDN 103 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT--EE-EEHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCCCEE-ECCc
Confidence 479999999999999863 2345567999999998554 4544
No 76
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=50.50 E-value=14 Score=29.84 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=24.5
Q ss_pred ccCCCcchhHHHHHHhccC-CCCCCCCCCCcEEEEc
Q 016487 47 FATNQFTAAMIFHARLENH-PLRTWDPSRATLFYVP 81 (388)
Q Consensus 47 ~~t~~y~~E~~fh~~l~~s-~~rT~dP~eAdlFfVP 81 (388)
+..+|+.+|.+. ..|.+. --.|.+|++||+++|=
T Consensus 9 C~~N~~Dse~i~-~~l~~~G~~~~~~~e~AD~iiiN 43 (98)
T PF00919_consen 9 CQMNQYDSERIA-SILQAAGYEIVDDPEEADVIIIN 43 (98)
T ss_pred CcccHHHHHHHH-HHHHhcCCeeecccccCCEEEEE
Confidence 345677888766 444544 4589999999999764
No 77
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=49.96 E-value=1.2e+02 Score=29.71 Aligned_cols=99 Identities=15% Similarity=0.199 Sum_probs=54.3
Q ss_pred hhhhcccCCCCCCceEEeecCCCCCC-Cch----HHHHHHHHHHccCCceeEeeeccCCCC--------------C--CC
Q 016487 191 LTWQHSMRLSKRPHLFSFVGAPRKGS-QRA----AIRYELIKQCGESIRCKLLTCRYGSGA--------------S--NK 249 (388)
Q Consensus 191 ~~w~~~~~~~~R~~L~~F~G~~~~~~-~~~----~iR~~L~~~~~~~~~~~~~~~~~~~~~--------------~--~~ 249 (388)
..|+.......|+..+...|+..... ++. .+=+.|.+..+..+....+..+.-... . ..
T Consensus 135 ~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~ 214 (311)
T PF06258_consen 135 AAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPGVYIW 214 (311)
T ss_pred HhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCceEEe
Confidence 34666666677888888888765432 121 222333333333332222222211000 0 00
Q ss_pred -CCChhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEe
Q 016487 250 -CSSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS 293 (388)
Q Consensus 250 -~~~~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~ 293 (388)
..+...|...|+.+...++ .+||.+ .+.||+.+| -||.+-
T Consensus 215 ~~~~~nPy~~~La~ad~i~V-T~DSvS--MvsEA~~tG-~pV~v~ 255 (311)
T PF06258_consen 215 DGTGENPYLGFLAAADAIVV-TEDSVS--MVSEAAATG-KPVYVL 255 (311)
T ss_pred cCCCCCcHHHHHHhCCEEEE-cCccHH--HHHHHHHcC-CCEEEe
Confidence 1123357888888877666 667776 599999999 788874
No 78
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=46.67 E-value=67 Score=33.74 Aligned_cols=141 Identities=12% Similarity=0.013 Sum_probs=70.3
Q ss_pred CceEEeecCC-CCCCCchHHHHHHHHHHccCCceeEeeeccCCCCCCCCCC-----hhhHHHhhhcC-eeeEecCCCCCC
Q 016487 203 PHLFSFVGAP-RKGSQRAAIRYELIKQCGESIRCKLLTCRYGSGASNKCSS-----PSEILGVMSKS-QFCLQAPGDSFT 275 (388)
Q Consensus 203 ~~L~~F~G~~-~~~~~~~~iR~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~y~~~m~~S-~FCL~P~Gd~~~ 275 (388)
..+++| |+. ..........+.+++.+++.+...+..............+ -....++|++. .-+.+=.|..-
T Consensus 298 ~V~vS~-GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~- 375 (507)
T PHA03392 298 VVYVSF-GSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQ- 375 (507)
T ss_pred EEEEEC-CCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCCCEEEecCCcc-
Confidence 445555 443 2222245788889999887766555554321110000001 11235566543 33444444433
Q ss_pred cchHHHHHhhCCeeEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHHHHcCCCHHHHHHHHHHHhhhcCc
Q 016487 276 RRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIEDELMKIPRERVERMRKKVIDLIPR 352 (388)
Q Consensus 276 ~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~L~~i~~~~~~~mr~~l~~~~~~ 352 (388)
++.||+.+| ||+|+-.... -|+..--=+-....++.++. .++..++|.+.++.+-.. ...+++.+++...
T Consensus 376 --s~~Eal~~G-vP~v~iP~~~-DQ~~Na~rv~~~G~G~~l~~-~~~t~~~l~~ai~~vl~~--~~y~~~a~~ls~~ 445 (507)
T PHA03392 376 --STDEAIDAL-VPMVGLPMMG-DQFYNTNKYVELGIGRALDT-VTVSAAQLVLAIVDVIEN--PKYRKNLKELRHL 445 (507)
T ss_pred --cHHHHHHcC-CCEEECCCCc-cHHHHHHHHHHcCcEEEecc-CCcCHHHHHHHHHHHhCC--HHHHHHHHHHHHH
Confidence 379999998 5777765431 11110000335677888876 355545676666554211 3345555555444
No 79
>PLN02316 synthase/transferase
Probab=46.27 E-value=40 Score=38.64 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=33.3
Q ss_pred HhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 258 GVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 258 ~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
..|+.|.+.+.|.=..+..-...+||++||+||+-.-.
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC
Confidence 68999999999987888888899999999999996543
No 80
>PLN00142 sucrose synthase
Probab=46.16 E-value=43 Score=37.33 Aligned_cols=91 Identities=9% Similarity=-0.011 Sum_probs=52.3
Q ss_pred HHhhhc-CeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHHHH--
Q 016487 257 LGVMSK-SQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIEDEL-- 331 (388)
Q Consensus 257 ~~~m~~-S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~~L-- 331 (388)
...+++ +..++.|.=..+..-.+.|||++|+ |||.++.- -++ +.-..-.+.|+.. +.. .+.+.|
T Consensus 660 yr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvG-------G~~EIV~dG~tG~LV~P~-D~e--aLA~aI~~ 728 (815)
T PLN00142 660 YRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQG-------GPAEIIVDGVSGFHIDPY-HGD--EAANKIAD 728 (815)
T ss_pred HHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCC-------CHHHHhcCCCcEEEeCCC-CHH--HHHHHHHH
Confidence 344443 3344566544545556999999997 77777652 122 3334445667663 333 443333
Q ss_pred --cC--CCHHHHHHHHHHH-hhhcCceEecCC
Q 016487 332 --MK--IPRERVERMRKKV-IDLIPRVTYKHP 358 (388)
Q Consensus 332 --~~--i~~~~~~~mr~~l-~~~~~~~~y~~~ 358 (388)
.. -.++...+|.++. .++..+|.|...
T Consensus 729 lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~ 760 (815)
T PLN00142 729 FFEKCKEDPSYWNKISDAGLQRIYECYTWKIY 760 (815)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 22 1577778887775 446677877653
No 81
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=39.67 E-value=79 Score=32.75 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=50.5
Q ss_pred hhhHHHhhhcCeeeEecC-CCCCCcchHHHHHhhCCee----EEEecCccccccccccCCCCCceEEEEeCCCCCccchH
Q 016487 253 PSEILGVMSKSQFCLQAP-GDSFTRRSTFDSVLAGCIP----VFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRI 327 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~-Gd~~~~~rl~dai~~GCIP----Vii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l 327 (388)
..+..+.|+.+.-|+.|. .++.+ --..|||++|+ | ||+++..-- .-. +. -++.|+.. +.. .+
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~-Lv~lEamA~g~-P~~g~vVlS~~~G~---~~~--l~---~gllVnP~-d~~--~l 412 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMN-LVAKEYVAAQD-PKDGVLILSEFAGA---AQE--LN---GALLVNPY-DID--GM 412 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccC-ccHHHHHHhcC-CCCceEEEeCCCCC---hHH--hC---CcEEECCC-CHH--HH
Confidence 467788899999999876 34433 34899999996 8 899875310 012 32 35677763 443 44
Q ss_pred HHHHcC---CCHHHHHHHHHHHhh
Q 016487 328 EDELMK---IPRERVERMRKKVID 348 (388)
Q Consensus 328 ~~~L~~---i~~~~~~~mr~~l~~ 348 (388)
.+.|.. .++++..++.+++.+
T Consensus 413 A~aI~~aL~~~~~er~~r~~~~~~ 436 (456)
T TIGR02400 413 ADAIARALTMPLEEREERHRAMMD 436 (456)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 444432 356555555555544
No 82
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=38.77 E-value=1.3e+02 Score=30.06 Aligned_cols=105 Identities=10% Similarity=0.136 Sum_probs=68.3
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccc---cccccccCCCCCceEEEEeCCCCCccchHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAY---TQYMWYLPQDAEEYSVYINGENGNATRRIEDE 330 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~---~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~~ 330 (388)
.++.+.|+.|.-+++=+|.+ -+.|+.. =++|+|+-...-- .||.=-..+-=...+..+++ .++.++++.+.
T Consensus 244 ~dm~~~~~~ADLvIsRaGa~----Ti~E~~a-~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~-~~lt~~~l~~~ 317 (357)
T COG0707 244 DDMAALLAAADLVISRAGAL----TIAELLA-LGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQ-SELTPEKLAEL 317 (357)
T ss_pred hhHHHHHHhccEEEeCCccc----HHHHHHH-hCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEecc-ccCCHHHHHHH
Confidence 46788999999999977754 2566554 4689999643210 11100000112467888888 46666678777
Q ss_pred HcCCC--HHHHHHHHHHHhhhcCceEecCCCCCCCCCcccHHHHHHHHHHH
Q 016487 331 LMKIP--RERVERMRKKVIDLIPRVTYKHPNASDDGEFEDAVDVAVAALAN 379 (388)
Q Consensus 331 L~~i~--~~~~~~mr~~l~~~~~~~~y~~~~~~~~~~~~DAf~~~~~~l~~ 379 (388)
|.++- ++++.+|.++.+.+.. .||.+.+.+.+..
T Consensus 318 i~~l~~~~~~l~~m~~~a~~~~~---------------p~aa~~i~~~~~~ 353 (357)
T COG0707 318 ILRLLSNPEKLKAMAENAKKLGK---------------PDAAERIADLLLA 353 (357)
T ss_pred HHHHhcCHHHHHHHHHHHHhcCC---------------CCHHHHHHHHHHH
Confidence 77663 5999999999875432 4777777776654
No 83
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=37.72 E-value=37 Score=35.06 Aligned_cols=88 Identities=11% Similarity=0.095 Sum_probs=53.3
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCe---eEEEecCccccccccccCCCCCceEEEEeCCCCCccchHHH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCI---PVFFSRHTAYTQYMWYLPQDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCI---PVii~d~~~~~~y~~~lPidw~~fsV~i~~~~~~~~~~l~~ 329 (388)
..+..+.|+.+.-++.|.-.....--+.|||.+||= |||+++.... .+ . ..-.+.|+.. +.. .+.+
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~~--~--~~~g~lv~p~-d~~--~la~ 419 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----AE--E--LSGALLVNPY-DID--EVAD 419 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccc----hh--h--cCCCEEECCC-CHH--HHHH
Confidence 456788888888888875333333447899999996 6999975311 01 1 2235666663 443 4444
Q ss_pred HHc---CCCHHHHHHHHHHHhhhcC
Q 016487 330 ELM---KIPRERVERMRKKVIDLIP 351 (388)
Q Consensus 330 ~L~---~i~~~~~~~mr~~l~~~~~ 351 (388)
.|. ..++++...|.++.++...
T Consensus 420 ai~~~l~~~~~e~~~~~~~~~~~v~ 444 (460)
T cd03788 420 AIHRALTMPLEERRERHRKLREYVR 444 (460)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 433 2366677777666665443
No 84
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=37.67 E-value=3.2e+02 Score=27.65 Aligned_cols=94 Identities=11% Similarity=0.174 Sum_probs=53.9
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccCCCCCceE-EEEeCCCCCc-cchHHHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLPQDAEEYS-VYINGENGNA-TRRIEDEL 331 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lPidw~~fs-V~i~~~~~~~-~~~l~~~L 331 (388)
.+..+.+.++++.+.-.=+..---+++|+|++|.|||.=...-. ..+.-.+|+.=. =++.++ +.. .+.+.+|+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP----~lDIV~~~~G~~tGFla~t-~~EYaE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGP----LLDIVTPWDGETTGFLAPT-DEEYAEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCC----ceeeeeccCCccceeecCC-hHHHHHHHHHHH
Confidence 56788889999988755444333469999999999998665421 011114554211 122221 111 12344444
Q ss_pred cCCCHHHHHHHHHHHhhhcCce
Q 016487 332 MKIPRERVERMRKKVIDLIPRV 353 (388)
Q Consensus 332 ~~i~~~~~~~mr~~l~~~~~~~ 353 (388)
. .+.++...||++-+.-.-+|
T Consensus 423 ~-~~~~~r~~~r~~AR~s~~RF 443 (465)
T KOG1387|consen 423 K-LNYDERNMMRRNARKSLARF 443 (465)
T ss_pred H-cCHHHHHHHHHHHHHHHHHh
Confidence 3 24566788888877655554
No 85
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=37.00 E-value=58 Score=28.18 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=24.2
Q ss_pred eEecCCCCCCcchHHHHHhhCCeeEEE
Q 016487 266 CLQAPGDSFTRRSTFDSVLAGCIPVFF 292 (388)
Q Consensus 266 CL~P~Gd~~~~~rl~dai~~GCIPVii 292 (388)
-+.|.+.|.+|-.|-|||.+=.||||=
T Consensus 71 vINpga~THTSvAlrDAi~av~iP~vE 97 (146)
T COG0757 71 VINPGAYTHTSVALRDAIAAVSIPVVE 97 (146)
T ss_pred EEcCccchhhHHHHHHHHHhcCCCEEE
Confidence 345999999999999999999999983
No 86
>PLN02275 transferase, transferring glycosyl groups
Probab=36.10 E-value=1.2e+02 Score=30.08 Aligned_cols=75 Identities=11% Similarity=0.018 Sum_probs=45.5
Q ss_pred CceEEeecCCCCCCCchHHHHHHHHHHccC--CceeEeeeccCCCCCCCCCChhhHHHhhhcCeeeEecCC----CCCCc
Q 016487 203 PHLFSFVGAPRKGSQRAAIRYELIKQCGES--IRCKLLTCRYGSGASNKCSSPSEILGVMSKSQFCLQAPG----DSFTR 276 (388)
Q Consensus 203 ~~L~~F~G~~~~~~~~~~iR~~L~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~y~~~m~~S~FCL~P~G----d~~~~ 276 (388)
++-+.+.|.- ..|..|.+..++. ++..++. + --...++.+.|+.+..++.|.. .+ ..
T Consensus 261 ~i~l~ivG~G-------~~~~~l~~~~~~~~l~~v~~~~---~------~~~~~~~~~~l~~aDv~v~~~~s~~~e~-~p 323 (371)
T PLN02275 261 RLLFIITGKG-------PQKAMYEEKISRLNLRHVAFRT---M------WLEAEDYPLLLGSADLGVSLHTSSSGLD-LP 323 (371)
T ss_pred CeEEEEEeCC-------CCHHHHHHHHHHcCCCceEEEc---C------CCCHHHHHHHHHhCCEEEEecccccccc-cc
Confidence 4667888852 2345555444432 3332221 1 1135678888999999887532 22 23
Q ss_pred chHHHHHhhCCeeEEEecC
Q 016487 277 RSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 277 ~rl~dai~~GCIPVii~d~ 295 (388)
..++|||++|+ |||.++.
T Consensus 324 ~~llEAmA~G~-PVVa~~~ 341 (371)
T PLN02275 324 MKVVDMFGCGL-PVCAVSY 341 (371)
T ss_pred HHHHHHHHCCC-CEEEecC
Confidence 46999999986 8888764
No 87
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=35.34 E-value=1.2e+02 Score=29.75 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=26.5
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
+..+.|+.|..++.+.|. ...||+.+|| |||+...
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~ 288 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYK 288 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEc
Confidence 567888999999997653 3459999986 7777644
No 88
>PRK10125 putative glycosyl transferase; Provisional
Probab=35.12 E-value=1.2e+02 Score=30.61 Aligned_cols=65 Identities=5% Similarity=0.035 Sum_probs=43.9
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHH
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~ 329 (388)
..+..+.|+.+...+.|.-......-+.|||++|| |||.+|-. -+| ++-. -.+.++. .+.. .|.+
T Consensus 297 ~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~-PVVat~~g-------G~~Eiv~~~-~G~lv~~-~d~~--~La~ 363 (405)
T PRK10125 297 KRKLMSALNQMDALVFSSRVDNYPLILCEALSIGV-PVIATHSD-------AAREVLQKS-GGKTVSE-EEVL--QLAQ 363 (405)
T ss_pred HHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCC-CEEEeCCC-------ChHHhEeCC-cEEEECC-CCHH--HHHh
Confidence 34567888888888888766666667999999995 88888763 233 4432 4677777 3444 5554
No 89
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=33.07 E-value=86 Score=34.91 Aligned_cols=85 Identities=8% Similarity=0.054 Sum_probs=52.1
Q ss_pred eeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccccccC--CCCCceEEEEeCCCCCccchHHHHHcCC------C
Q 016487 264 QFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYMWYLP--QDAEEYSVYINGENGNATRRIEDELMKI------P 335 (388)
Q Consensus 264 ~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~~~lP--idw~~fsV~i~~~~~~~~~~l~~~L~~i------~ 335 (388)
..+++|.=..+--.-+.|||++||- ||.++.- -++ +.-..-.+.|+.. +.. .+.+.|..+ .
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGlP-VVAT~~G-------G~~EiV~dg~tGfLVdp~-D~e--aLA~aL~~ll~kll~d 713 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGLP-TFATRFG-------GPLEIIQDGVSGFHIDPY-HGE--EAAEKIVDFFEKCDED 713 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCCC-EEEcCCC-------CHHHHhcCCCcEEEeCCC-CHH--HHHHHHHHHHHHhcCC
Confidence 3556666556656679999999985 5555532 122 3334456667763 333 455544432 5
Q ss_pred HHHHHHHHHHHh-hhcCceEecCCC
Q 016487 336 RERVERMRKKVI-DLIPRVTYKHPN 359 (388)
Q Consensus 336 ~~~~~~mr~~l~-~~~~~~~y~~~~ 359 (388)
++.+.+|.++.. ++..+|.|....
T Consensus 714 p~~~~~ms~~a~~rV~~~FSW~~~A 738 (784)
T TIGR02470 714 PSYWQKISQGGLQRIYEKYTWKIYS 738 (784)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 778888888754 467888887643
No 90
>KOG3185 consensus Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis]
Probab=31.76 E-value=34 Score=31.12 Aligned_cols=32 Identities=31% Similarity=0.552 Sum_probs=28.5
Q ss_pred cCeeeEecCCCCCCcchHHHHHhhCCeeEEEe
Q 016487 262 KSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS 293 (388)
Q Consensus 262 ~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~ 293 (388)
.-+|||+-.|.+-.=.++|||=..+.|||+-.
T Consensus 20 TNtYclva~ggS~nfys~~e~el~d~IPiV~t 51 (245)
T KOG3185|consen 20 TNTYCLVAIGGSENFYSAFEAELGDVIPIVHT 51 (245)
T ss_pred ccceEEEEecCchhHHHHHHHHhcCccceEEe
Confidence 56799999999988888999999999999854
No 91
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=29.95 E-value=56 Score=32.82 Aligned_cols=92 Identities=14% Similarity=0.175 Sum_probs=52.9
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCccccccc----------cccC--CCCCceEEEEeCCCCC
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTAYTQYM----------WYLP--QDAEEYSVYINGENGN 322 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~~~~y~----------~~lP--idw~~fsV~i~~~~~~ 322 (388)
+..+.|+.|.+++++.|.+ -+ |++.+|+ |+|+.......+|. +.+| +-=.....-+-+ ++.
T Consensus 260 ~~~~~l~aADl~V~~SGt~----tl-Ea~a~G~-P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q-~~~ 332 (385)
T TIGR00215 260 DARKAMFAADAALLASGTA----AL-EAALIKT-PMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQ-EEC 332 (385)
T ss_pred hHHHHHHhCCEEeecCCHH----HH-HHHHcCC-CEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcC-CCC
Confidence 4467899999999998653 24 9999985 77777554322221 1122 111121222222 233
Q ss_pred ccchHHHHHcCC--CH----HHHHHHHHHHhhhcCce
Q 016487 323 ATRRIEDELMKI--PR----ERVERMRKKVIDLIPRV 353 (388)
Q Consensus 323 ~~~~l~~~L~~i--~~----~~~~~mr~~l~~~~~~~ 353 (388)
.+++|.+.+..+ .+ +...+|++.+.++.+.+
T Consensus 333 ~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l 369 (385)
T TIGR00215 333 TPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRI 369 (385)
T ss_pred CHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh
Confidence 344555444443 34 67888888888888776
No 92
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.99 E-value=1.2e+02 Score=28.90 Aligned_cols=35 Identities=14% Similarity=0.424 Sum_probs=28.6
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEe
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS 293 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~ 293 (388)
..+..+.|+.|.+.+...|- .++|++.+| +|+|+-
T Consensus 232 ~~~m~~lm~~aDl~Is~~G~-----T~~E~~a~g-~P~i~i 266 (279)
T TIGR03590 232 VENMAELMNEADLAIGAAGS-----TSWERCCLG-LPSLAI 266 (279)
T ss_pred HHHHHHHHHHCCEEEECCch-----HHHHHHHcC-CCEEEE
Confidence 35678999999999998772 289999999 777765
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=26.75 E-value=72 Score=29.13 Aligned_cols=41 Identities=15% Similarity=0.166 Sum_probs=29.8
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
....+.++.+...+.|.-.......+.||+.+| +|||.++.
T Consensus 268 ~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g-~pvi~~~~ 308 (381)
T COG0438 268 EELAELLASADVFVLPSLSEGFGLVLLEAMAAG-TPVIASDV 308 (381)
T ss_pred HHHHHHHHhCCEEEeccccccchHHHHHHHhcC-CcEEECCC
Confidence 455667887889999853322222389999999 99999876
No 94
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=25.38 E-value=2.4e+02 Score=30.99 Aligned_cols=40 Identities=10% Similarity=0.006 Sum_probs=30.1
Q ss_pred hHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecC
Q 016487 255 EILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRH 295 (388)
Q Consensus 255 ~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~ 295 (388)
+....|..+...+.|.-.......+.|||.+|| |||.++.
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~ 623 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLA 623 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECC
Confidence 466778888877777555555667999999995 7888775
No 95
>cd01611 GABARAP Ubiquitin domain of GABA-receptor-associated protein. GABARAP (GABA-receptor-associated protein) belongs ot a large family of proteins that mediate intracellular membrane trafficking and/or fusion. GABARAP binds not only to GABA, type A but also to tubulin, gephrin, and ULK1. Orthologues of GABARAP include Gate-16 (golgi-associated ATPase enhancer), LC3 (microtubule-associated protein light chain 3), and ATG8 (autophagy protein 8). ATG8 is a ubiquitin-like protein that is conjugated to the membrane phospholipid, phosphatidylethanolamine as part of a ubiquitin-like conjugation system essential for autophagosome-formation.
Probab=24.21 E-value=76 Score=26.32 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=26.0
Q ss_pred CCeeEEEecCccccccccccC-CCCCceEEEEeCCCCCccchHHHHHc
Q 016487 286 GCIPVFFSRHTAYTQYMWYLP-QDAEEYSVYINGENGNATRRIEDELM 332 (388)
Q Consensus 286 GCIPVii~d~~~~~~y~~~lP-idw~~fsV~i~~~~~~~~~~l~~~L~ 332 (388)
..||||+..... -.+| +|-.+|. ||++..+. ++..+|+
T Consensus 23 ~~iPVIvE~~~~-----~~~p~l~k~Kfl--Vp~~~tv~--~f~~~ir 61 (112)
T cd01611 23 DRIPVIVERYPK-----SDLPDLDKKKYL--VPSDLTVG--QFVYIIR 61 (112)
T ss_pred CceEEEEEEcCC-----CCcccccCceEE--ecCCCCHH--HHHHHHH
Confidence 589999996532 3677 8999985 67742333 6776663
No 96
>PF10550 Toxin_36: Conantokin-G mollusc-toxin; InterPro: IPR005918 The conantokins are a family of neuroactive peptides found in the venoms of fish-hunting cone snails. They possess a relatively high number of residues (4-5) of the non-standard amino acid gamma-carboxyglutamic acid (Gla), which is generated by the post-translational modification of glutamate (Glu) residues. Conantokins are the only naturally produced peptides known to be N-methyl-D-aspartate (NMDA) receptor antagonists and show therapeutic promise in treating conditions associated with NMDA receptor dysfunction. In animal models they have exhibited anticonvulsant and anti-Parkinsonian properties and have provided neuroprotection within therapeutically acceptable times following transient focal brain ischemia [, , , ]. Upon binding of Ca2+ to Gla, conantokin undergoes a conformational transition from a distorted curvilinear 3(10) helix to a linear alpha-helix. The binding of Ca2+ to conantokin leads to the exposure of a hydrophobic region on the opposite face of the helix []. Conantokins share relatively few sequence elements, which include include sequence identity at the first four residues, homologous positioning of the two most C-terminal Gla residues, and an Arg preceding the most C-terminal Gla []. The conantokin family is currently known to include: Conotoxin G from Conus geographus (Geography cone) (Nubecula geographus). Conantokin-L from Conus lynceus (Lynceus cone). Conantokin-R from Conus radiatus (Rayed cone). Conantokin-T from Conus tulipa (Fish-hunting cone snail) (Tulip cone). ; PDB: 1ONT_A.
Probab=22.79 E-value=96 Score=16.03 Aligned_cols=13 Identities=23% Similarity=0.404 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHhh
Q 016487 336 RERVERMRKKVID 348 (388)
Q Consensus 336 ~~~~~~mr~~l~~ 348 (388)
+++++.|-++|++
T Consensus 2 eee~~km~~~lar 14 (15)
T PF10550_consen 2 EEEVAKMAAELAR 14 (15)
T ss_dssp HHHHHHHHHHH-H
T ss_pred hHHHHHHHHHHhc
Confidence 5788888888754
No 97
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=22.58 E-value=78 Score=31.35 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=29.8
Q ss_pred hhHHHhhhcCeeeEecCCCC-----CCcchHHHHHhhCCeeEEEec
Q 016487 254 SEILGVMSKSQFCLQAPGDS-----FTRRSTFDSVLAGCIPVFFSR 294 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~-----~~~~rl~dai~~GCIPVii~d 294 (388)
.+..+.++.+..|+.|--.+ .....++|+|++|+ |||.++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 56788999999999986332 12235999999996 777654
No 98
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=22.02 E-value=7.3e+02 Score=24.05 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=27.4
Q ss_pred hhhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEec
Q 016487 253 PSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSR 294 (388)
Q Consensus 253 ~~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d 294 (388)
..++...|..+.+.+.+.|. -+.||+.+|| |||...
T Consensus 265 ~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~ 300 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLR 300 (365)
T ss_pred hHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECC
Confidence 45678899999999877642 3799999986 777753
No 99
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=20.43 E-value=2.4e+02 Score=26.97 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=49.2
Q ss_pred hhHHHhhhcCeeeEecCCCCCCcchHHHHHhhCCeeEEEecCcc---ccccc-cccCCCCCceEEEEeCCCCCccchHHH
Q 016487 254 SEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSRHTA---YTQYM-WYLPQDAEEYSVYINGENGNATRRIED 329 (388)
Q Consensus 254 ~~y~~~m~~S~FCL~P~Gd~~~~~rl~dai~~GCIPVii~d~~~---~~~y~-~~lPidw~~fsV~i~~~~~~~~~~l~~ 329 (388)
.++.+.|..+.+.+.+.|. ..+.|||.+|+ |||+.+... -.|.. ... +......+.++. .+..++.|.+
T Consensus 244 ~~~~~~l~~ad~~v~~sg~----~t~~Eam~~G~-Pvv~~~~~~~~~~~~~~~~~~-l~~~g~g~~v~~-~~~~~~~l~~ 316 (350)
T cd03785 244 DDMAAAYAAADLVISRAGA----STVAELAALGL-PAILIPLPYAADDHQTANARA-LVKAGAAVLIPQ-EELTPERLAA 316 (350)
T ss_pred hhHHHHHHhcCEEEECCCH----hHHHHHHHhCC-CEEEeecCCCCCCcHHHhHHH-HHhCCCEEEEec-CCCCHHHHHH
Confidence 4678889999999987762 34899999997 555543210 00000 000 222345566665 2111225555
Q ss_pred HHcCC--CHHHHHHHHHHHhh
Q 016487 330 ELMKI--PRERVERMRKKVID 348 (388)
Q Consensus 330 ~L~~i--~~~~~~~mr~~l~~ 348 (388)
.|..+ .++...+|+++.+.
T Consensus 317 ~i~~ll~~~~~~~~~~~~~~~ 337 (350)
T cd03785 317 ALLELLSDPERLKAMAEAARS 337 (350)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 54433 46777778877654
Done!