BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016489
(388 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q16134|ETFD_HUMAN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Homo sapiens GN=ETFDH PE=1 SV=2
Length = 617
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/401 (56%), Positives = 288/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+K
Sbjct: 219 VGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLK 276
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE PG + HT+GWPLD+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P
Sbjct: 277 ELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSP 336
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+I+P LEGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPK
Sbjct: 337 FREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPK 396
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG+LAAE+ F L ++ ++ Y D L+ SWVW+EL RN RP
Sbjct: 397 IKGTHTAMKSGILAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRP 456
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++ILRG P+TLKH D E A+ +PIEYPKPDG +SF
Sbjct: 457 SCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISF 516
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL LRD IP NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 517 DLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDG 576
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 577 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q5RDD3|ETFD_PONAB Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Pongo abelii GN=ETFDH PE=2 SV=1
Length = 617
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/401 (56%), Positives = 288/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+K
Sbjct: 219 VGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLK 276
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE PG + HT+GWPLD+ TYGGSFLYH+N+ + +ALGLVV L+Y NP+L+P
Sbjct: 277 ELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSP 336
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+I+P LEGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPK
Sbjct: 337 FREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPK 396
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG+LAAE+ F L ++ ++ Y D L+ SWVW+EL RN RP
Sbjct: 397 IKGTHTAMKSGILAAESIFNQLTSENLQSKTMGLHVTEYEDNLKNSWVWKELYSVRNIRP 456
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++ILRG P+TLKH D E A+ +PIEYPKPDG +SF
Sbjct: 457 SCHGVLGVYGGMIYTGIFYWILRGMEPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISF 516
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL LRD IP NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 517 DLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDG 576
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 577 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q6UPE1|ETFD_RAT Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Rattus norvegicus GN=Etfdh PE=2 SV=1
Length = 616
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/401 (56%), Positives = 286/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++ K F LR AQ TY +G+K
Sbjct: 218 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQFYKKFDLRASCDAQ--TYGIGLK 275
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE K PG + HT+GWPLD+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P
Sbjct: 276 ELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSP 335
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+I+P LEGG + YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPK
Sbjct: 336 FREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPK 395
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG LAAEA F L ++ ++ Y D L++SWVW+EL RN RP
Sbjct: 396 IKGTHTAMKSGSLAAEAIFKQLTSENLQSKTAGLHVTEYEDNLKQSWVWKELHAVRNIRP 455
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++ILRG P+TLKH D E A+ +PIEYPKPDG +SF
Sbjct: 456 SCHGILGVYGGMIYTGIFYWILRGMEPWTLKHKGSDSEQLKPAKDCTPIEYPKPDGQISF 515
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL L+D IP NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 516 DLLSSVALSGTNHEHDQPAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDG 575
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 576 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 616
>sp|Q2KIG0|ETFD_BOVIN Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Bos taurus GN=ETFDH PE=2 SV=1
Length = 617
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/401 (55%), Positives = 288/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++L + F LR ++ + QTY +G+K
Sbjct: 219 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYRKFDLR--ANCEPQTYGIGLK 276
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE K PG + HT+GWPLD+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P
Sbjct: 277 ELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGFVVGLDYQNPYLSP 336
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+I+P LEGG + YGAR LNEGGLQ IP FPGG +IGC+ GF+NVPK
Sbjct: 337 FREFQRWKHHPSIQPTLEGGKRIAYGARALNEGGLQCIPKLTFPGGLLIGCSPGFMNVPK 396
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG+LAAE+ F L ++ ++ Y D L+KSWVW+EL RN RP
Sbjct: 397 IKGTHTAMKSGILAAESIFNQLTNENLQSKTIGLDVTEYEDNLKKSWVWKELYAVRNIRP 456
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++I RG P+TLKH D + A+ +PIEYPKPDG +SF
Sbjct: 457 SCHSILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDKLKPAKDCTPIEYPKPDGQISF 516
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL L+D +P NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 517 DLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDG 576
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 577 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q921G7|ETFD_MOUSE Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Mus musculus GN=Etfdh PE=1 SV=1
Length = 616
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/401 (55%), Positives = 287/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++L K F LR AQ TY +G+K
Sbjct: 218 VGIQKDGAPKTTFERGLELHAKVTVFAEGCHGHLAKQLYKKFDLRASCDAQ--TYGIGLK 275
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE K PG + HT+GWPLD+ TYGGSFLYH+N+ + +A+G VV L+Y NP+L+P
Sbjct: 276 ELWIIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVAVGFVVGLDYQNPYLSP 335
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+I+P LEGG + YGAR LNEGGLQSIP FPGG +IGC+ GF+NVPK
Sbjct: 336 FREFQRWKHHPSIQPTLEGGKRIAYGARALNEGGLQSIPKLTFPGGLLIGCSPGFMNVPK 395
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG LAAE+ F L ++ ++ Y D L++SWVW+EL RN RP
Sbjct: 396 IKGTHTAMKSGSLAAESIFKQLTSENLQSKTTGLHVTEYEDNLKQSWVWKELHAVRNIRP 455
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++ILRG P+TLKH D + A+ +PIEYPKPDG +SF
Sbjct: 456 SCHGILGVYGGMIYTGIFYWILRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISF 515
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL L+D IP NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 516 DLLSSVALSGTNHEHDQPAHLTLKDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDG 575
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 576 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 616
>sp|P55931|ETFD_PIG Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Sus scrofa GN=ETFDH PE=1 SV=2
Length = 617
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/401 (55%), Positives = 286/401 (71%), Gaps = 15/401 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K F+RG+EL ++T+ AEGC G L+++L K F LR ++ + QTY +G+K
Sbjct: 219 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLK 276
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ--IALGLVVALNYHNPFLNP 118
E+W IDE K PG + HT+GWPLD+ TYGGSFLYH+N+ + +ALG VV L+Y NP+L+P
Sbjct: 277 ELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSP 336
Query: 119 YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPK 178
+ EFQ++KHHP+IKP LEGG + YGAR LNEGG QSIP FPGG +IGC+ GF+NVPK
Sbjct: 337 FREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPK 396
Query: 179 IKGTHTAMKSGMLAAEAGFGVLHEDS--------NMEIYWDTLQKSWVWQELQRARNYRP 230
IKGTHTAMKSG LAAE+ F L ++ ++ Y D L+ SWVW+EL RN RP
Sbjct: 397 IKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRP 456
Query: 231 AFE--YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSF 288
+ G+ G+ G+ ++I RG P+TLKH D + A+ +PIEYPKPDG +SF
Sbjct: 457 SCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISF 516
Query: 289 DVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-NQ 347
D+ +S+ S TNHEHDQPAHL L+D +P NL Y GPE R+CPA VYE+VP E+ +
Sbjct: 517 DLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDG 576
Query: 348 LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
+LQINAQNC+HCK CDIKDP QNI W VPEGGGGP Y+ M
Sbjct: 577 FRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617
>sp|Q54XM6|ETFD_DICDI Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Dictyostelium discoideum GN=etfdh PE=3
SV=1
Length = 606
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/404 (54%), Positives = 280/404 (69%), Gaps = 18/404 (4%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
MGIAKDGS NF RG+EL R+T+ AEGCRGSL++ L + F LR++ + QT+ LGIK
Sbjct: 205 MGIAKDGSLTSNFTRGMELNARLTIFAEGCRGSLTKGLFEKFNLRDE--CEPQTFGLGIK 262
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYE 120
E WEI KH G ++HTLG+PL + GGSF+YH + + LGLVV L+Y NP+LNPY+
Sbjct: 263 ETWEIKPEKHQQGLVIHTLGYPLSDELLGGSFIYHAENNTVNLGLVVGLDYSNPYLNPYQ 322
Query: 121 EFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIK 180
EFQK K HP +K +LEGGT +QYGART+NEGG QSIP VFPGGA++GC AGF++VPK+K
Sbjct: 323 EFQKLKLHPMVKDMLEGGTCIQYGARTINEGGFQSIPKLVFPGGALVGCTAGFVHVPKVK 382
Query: 181 GTHTAMKSGMLAAEAGFGVLHEDSN----------------MEIYWDTLQKSWVWQELQR 224
G+H AMK+G+LAAEA F L + Y + L+KSWVW+EL+
Sbjct: 383 GSHYAMKTGILAAEAAFPQLISQQEKEQEQEQDKPSVEPLLINEYPEELKKSWVWKELRE 442
Query: 225 ARNYRPAFEYGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDG 284
RNYRP+ +G +PGL LE YI RG +P+TL +GKPD+E A IEY KPDG
Sbjct: 443 VRNYRPSLHWGTIPGLIYGALEMYIFRGHTPWTLSNGKPDNERLKPAAECKKIEYKKPDG 502
Query: 285 VLSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDE 344
++FD+ TS+ RS TNHE +QP HL++RD ++ + VN Y GPE R+CPA VYE+V E
Sbjct: 503 QITFDLMTSVMRSGTNHEENQPIHLKVRDMEVAKKVNRDIYDGPEGRFCPAGVYEWVEGE 562
Query: 345 KNQLKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
K + +L N+ CLHCK CDIKDP QNI +TVPEGGGGP Y M
Sbjct: 563 KGEKELVRNSVFCLHCKTCDIKDPTQNIDFTVPEGGGGPKYGAM 606
>sp|Q11190|ETFD_CAEEL Electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Caenorhabditis elegans GN=let-721 PE=1
SV=2
Length = 597
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/401 (52%), Positives = 275/401 (68%), Gaps = 17/401 (4%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
+GI KDG+ K+ F RG+E + T+ AEGCRG LS++++ F LR +HA TY +G+K
Sbjct: 201 VGIGKDGAPKDGFARGMEFHAKCTIFAEGCRGHLSKQVLDKFDLR--THAM--TYGIGLK 256
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQ---IALGLVVALNYHNPFLN 117
E+WEID KH PG + HT+GWPL+ YGGSFLYH+ D+ +++G VVAL+Y NP LN
Sbjct: 257 ELWEIDPAKHRPGYVEHTMGWPLNVDQYGGSFLYHIEDQGQPLVSVGFVVALDYANPNLN 316
Query: 118 PYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVP 177
PY+EFQK+K HP+I LEGG + YGAR LNEGG QSIP FPGG ++GC+AGFLNV
Sbjct: 317 PYKEFQKYKTHPSISKQLEGGKRIGYGARALNEGGFQSIPKLHFPGGCLVGCSAGFLNVA 376
Query: 178 KIKGTHTAMKSGMLAAEAGFGVLHEDS------NMEIYWDTLQKSWVWQELQRARNYRPA 231
K+KGTH AMKSGM+AAE+ F + + + Y ++ ++V +EL+ RN RP+
Sbjct: 377 KLKGTHNAMKSGMVAAESIFEDIQQKGEDVQTIDPATYDKNIRDTYVVKELKATRNIRPS 436
Query: 232 F--EYGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFD 289
F G + GL G+ + RG P+TL HGK D+E + I+YPKPDG L+FD
Sbjct: 437 FNTSLGYIGGLIYSGIFYVFGRGIEPWTLGHGKKDNEKLIPVKDAKEIDYPKPDGKLTFD 496
Query: 290 VPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLK 349
+ TS+ + TNH DQPAHL L++ ++P VNL Y GPE+R+CPA VYE+VP E ++ K
Sbjct: 497 LLTSVSLTGTNHTEDQPAHLTLKNDQVPLDVNLAVYGGPEARFCPAGVYEFVPSEADESK 556
Query: 350 --LQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
LQINAQNC+HCK CDIKDP+QNI W PEGGGGP Y M
Sbjct: 557 KRLQINAQNCIHCKTCDIKDPQQNINWVTPEGGGGPKYEGM 597
>sp|Q08822|ETFD_YEAST Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CIR2 PE=1 SV=1
Length = 631
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/414 (49%), Positives = 271/414 (65%), Gaps = 30/414 (7%)
Query: 2 GIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKE 61
GI+K G KE F+RG+E R T+LAEGC GSL+++ + + LR+ QHQTY LGIKE
Sbjct: 219 GISKSGKPKETFERGMEFWARQTVLAEGCHGSLTKQALAKYDLRKGR--QHQTYGLGIKE 276
Query: 62 VWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEE 121
VWE+ N G HT+G+PL YGG F YH D + +GLVV L+Y NP+++PY+E
Sbjct: 277 VWEVKPENFNKGFAAHTMGYPLTNDVYGGGFQYHFGDGLVTVGLVVGLDYKNPYVSPYKE 336
Query: 122 FQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKG 181
FQK KHHP +LEGG + Y AR LNEGGLQS+P FPGG ++G +AGF+NVPKIKG
Sbjct: 337 FQKMKHHPYYSKVLEGGKCIAYAARALNEGGLQSVPKLNFPGGVLVGASAGFMNVPKIKG 396
Query: 182 THTAMKSGMLAAEAGF----------GVLHEDS-----------NMEIYWDTLQKSWVWQ 220
THTAMKSG+LAAE+ F V ED+ N+E Y ++S +++
Sbjct: 397 THTAMKSGLLAAESIFESIKGLPVLEEVEDEDAKMAMFDKEATINLESYESAFKESSIYK 456
Query: 221 ELQRARNYRPAF--EYGLLPGLAICGLEHYILRGKSPYTLKHG-KPDHEATDAARLHSPI 277
EL RN RP+F + G G+ G++ IL+GK P+TLK K D E + A + PI
Sbjct: 457 ELYEVRNIRPSFSGKLGGYGGMIYSGIDSLILKGKVPWTLKFDEKNDGEILEPASKYKPI 516
Query: 278 EYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELV--NLPEYAGPESRYCPA 335
EYPKPDGV+SFD+ TS+ R+ T H+ D+P HLR+ + + + P + G ESR+CPA
Sbjct: 517 EYPKPDGVISFDILTSVSRTGTYHDDDEPCHLRVPGQDMVKYAERSFPVWKGVESRFCPA 576
Query: 336 RVYEYVPDEKNQL--KLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSV 387
VYE+V DEK+ + +LQIN+QNC+HCK CDIK P+Q+I W VPEGG GP Y++
Sbjct: 577 GVYEFVKDEKSPVGTRLQINSQNCIHCKTCDIKAPRQDITWKVPEGGDGPKYTL 630
>sp|Q9HZP5|ETFD_PSEAE Electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=PA2953 PE=1 SV=1
Length = 551
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/394 (50%), Positives = 260/394 (65%), Gaps = 8/394 (2%)
Query: 1 MGIAKDGSKKENFQR-GVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGI 59
+G+ ++G+ KE + G+ELR + TL AEGCRG + ++LIK + L ++ AQH Y +GI
Sbjct: 160 LGVDREGNPKEGYYTPGMELRAKYTLFAEGCRGHIGKQLIKKYNLDSEADAQH--YGIGI 217
Query: 60 KEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY 119
KE+W+ID KH PG ++HT GWPL+ + GGSFLYH+ + Q+ +GL++ L+Y NP L+P+
Sbjct: 218 KEIWDIDPSKHKPGLVVHTAGWPLNDENTGGSFLYHLENNQVFVGLIIDLSYSNPHLSPF 277
Query: 120 EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKI 179
+EFQ++KHHP +K LEGG V YGAR + +GGL S+P VFPGGA+IGC G LN KI
Sbjct: 278 DEFQRYKHHPVVKQYLEGGKRVAYGARAICKGGLNSLPKMVFPGGALIGCDLGTLNFAKI 337
Query: 180 KGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF-EY 234
KG+HTAMKSGMLAA+A L + Y D + SW++ EL R+RN+ A ++
Sbjct: 338 KGSHTAMKSGMLAADAIAEALAAGREGGDELSSYVDAFKASWLYDELFRSRNFGAAIHKF 397
Query: 235 GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSL 294
G + G A ++ I GK P TL KPD+ A I+YPKPDG LSFD +S+
Sbjct: 398 GAIGGGAFNFIDQNIFGGKIPVTLHDDKPDYACLKKASEAPKIDYPKPDGKLSFDKLSSV 457
Query: 295 HRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINA 354
SNTNHE DQP HL+L D IP NLP Y P RYCPA VYE V ++ + QINA
Sbjct: 458 FLSNTNHEEDQPIHLKLADASIPIEKNLPLYDEPAQRYCPAGVYEVVANDDGSKRFQINA 517
Query: 355 QNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
QNC+HCK CDIKDP QNI W PEG GGP Y M
Sbjct: 518 QNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM 551
>sp|P87111|ETFD_SCHPO Probable electron transfer flavoprotein-ubiquinone oxidoreductase,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC20G8.04c PE=3 SV=1
Length = 632
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/396 (47%), Positives = 257/396 (64%), Gaps = 12/396 (3%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
G+ G K+NF+RG+ +TL AEG GSLS+ +IK F LR + + QTY LG+K
Sbjct: 239 FGVDSKGLPKDNFERGMAFHAPVTLFAEGAHGSLSKSIIKRFNLR--GNCEPQTYGLGVK 296
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYE 120
EVW + + GE+ HTLGWP+ TYGG F+Y D + +GLVV L+Y NP+++P
Sbjct: 297 EVWRVPDENFRKGEVAHTLGWPMRNDTYGGGFMYQFGDNYVTVGLVVGLDYPNPYVSPAL 356
Query: 121 EFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIK 180
EFQ+ K +P +L+GG ++Y AR LNEGG Q+IP VFPGGA+IGC+AGF+NV KIK
Sbjct: 357 EFQRMKQNPFFAKVLKGGKCLEYAARALNEGGYQAIPKLVFPGGALIGCSAGFVNVAKIK 416
Query: 181 GTHTAMKSGMLAAEAGFGVLHEDSN-----MEIYWDTLQKSWVWQELQRARNYRPAFE-- 233
GTHTAMKSG++AA+A D+ + Y + L+ ++V++EL RN RP+F
Sbjct: 417 GTHTAMKSGIVAADAIVDAFGRDAASKPLLLNDYEENLKNTYVFKELYSVRNIRPSFHSF 476
Query: 234 YGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTS 293
G G+A +E Y+L+G+ P+TLKH D +AT +A + PI YPKPD VLSFD+PTS
Sbjct: 477 LGNYGGMAYSAVEAYVLKGRVPWTLKHKGGDAKATKSASKYKPINYPKPDNVLSFDIPTS 536
Query: 294 LHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQL--KLQ 351
+ RS T H +QP HL PK + Y G E+++CPA VYEYV DE + +
Sbjct: 537 VSRSATMHAENQPCHLFDHRPKDRKSC-FETYKGVENKFCPAGVYEYVNDEASSYGKRFV 595
Query: 352 INAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSV 387
IN+QNC+HCK CDIKDP Q I+W P+GG GP Y++
Sbjct: 596 INSQNCVHCKTCDIKDPLQGIQWKTPQGGDGPKYTL 631
>sp|P94132|ETFD_ACIAD Probable electron transfer flavoprotein-ubiquinone oxidoreductase
OS=Acinetobacter sp. (strain ADP1) GN=etfD PE=4 SV=1
Length = 570
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/412 (47%), Positives = 247/412 (59%), Gaps = 29/412 (7%)
Query: 1 MGIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60
MGI KDG NF G EL + TL AEGCRG L ++LI F L + + QH Y +GIK
Sbjct: 164 MGIGKDGEPTHNFAPGYELHAKYTLFAEGCRGHLGKRLINKFNLDQDADPQH--YGIGIK 221
Query: 61 EVWEIDEGKHNPGEILHTLGWPLDQK-TYGGSFLYHMNDRQIALGLVVALNYHNPFLNPY 119
E+WEID KH PG ++H GWPL + + GG +LYH + Q+ LG++V L+Y NP + P+
Sbjct: 222 ELWEIDPAKHKPGLVMHGSGWPLSETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMFPF 281
Query: 120 EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKI 179
E Q++K HP IK LEGG + YGAR + +GGL S+P FPGG +IG AGFLN KI
Sbjct: 282 MEMQRWKTHPLIKQYLEGGKRISYGARAVVKGGLNSLPKLTFPGGCLIGDDAGFLNFAKI 341
Query: 180 KGTHTAMKSGMLAAEAGFGVLHE--------------------DSNMEIYWDTLQKSWVW 219
KG+HTAMKSGML EA F + D + Y KSW+
Sbjct: 342 KGSHTAMKSGMLCGEAVFEAIARGVDKGGDLAIARVVEGEDLFDKELTTYTQKFDKSWLK 401
Query: 220 QELQRARNYRPAF-EYGLLPGLAICGLEHYILRGKSPYTLKHGKPDHEA--TDAARLHSP 276
+EL R+RN+ PA ++GL G A ++ I K P+TL +PD+ A T P
Sbjct: 402 EELHRSRNFGPAMHKFGLWIGGAFNFVDQNIF--KVPFTLHDLQPDYSALKTQDQATFKP 459
Query: 277 IEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHLRLRDPKIPELVNLPEYAGPESRYCPAR 336
YPKPDG L+FD +S+ SNT HE +QP+HL+L D IP VNLP + P RYCPA
Sbjct: 460 -NYPKPDGKLTFDRLSSVFVSNTVHEENQPSHLKLTDASIPVAVNLPRWDEPAQRYCPAG 518
Query: 337 VYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388
VYE V + + + QINA NC+HCK CDIKDP QNI W PEGGGGP Y M
Sbjct: 519 VYEIVDEGEGNKRFQINAANCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM 570
>sp|P26484|FIXC_AZOC5 Protein FixC OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM
5975 / ORS 571) GN=fixC PE=3 SV=2
Length = 435
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 114/228 (50%), Gaps = 22/228 (9%)
Query: 14 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGK 69
+ G ++ + +LAEG G L K LRE+ +H AL +KE+ E E +
Sbjct: 149 RSGGQIHADVVVLAEGVNGLLGTKA----HLRERPKPEH--VALAVKEMHFLPRETIEAR 202
Query: 70 HN----PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQK 124
N G ++ G + + G F+Y N I+LG+ + ++ PY ++
Sbjct: 203 FNLQGDEGVVIEAAG-TISRGMTGMGFIY-ANKECISLGIGCLVSDFQKTGETPYGLLER 260
Query: 125 FKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 184
FK HP++ PL+EG V +Y A + EGG ++IP G ++G AA N +G++
Sbjct: 261 FKSHPSVAPLIEGSEVKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNL 320
Query: 185 AMKSGMLAAEAGFGVLHEDS-----NMEIYWDTLQKSWVWQELQRARN 227
AM SG +AAEA F V N+ +Y L++S+V +++++ ++
Sbjct: 321 AMTSGRIAAEAIFQVKSRREPMSAKNLSLYKTMLEESFVLKDMKKYKD 368
>sp|Q53208|FIXC_RHISN Protein FixC OS=Rhizobium sp. (strain NGR234) GN=fixC PE=3 SV=1
Length = 435
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 22/219 (10%)
Query: 23 ITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNP--------GE 74
+ +LAEG G L + R + + + AL +KE+ + E N G
Sbjct: 158 VVVLAEGVNGLLGTRA------RFRKVPKPEAVALAVKEMHFLPEEVINERFGLTGDQGC 211
Query: 75 ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFL-NPYEEFQKFKHHPAIKP 133
++ G + + G FLY N I+LG+ +++ L +PY FK+HP+I+P
Sbjct: 212 VIEAAG-TISRGMAGLGFLY-TNKESISLGIGCLVSHFAATLESPYALLDAFKNHPSIRP 269
Query: 134 LLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAA 193
LL G + +Y A + EGG ++IP G ++G AA N +G++ AM SG +A
Sbjct: 270 LLAGSEIKEYAAHLIPEGGFKAIPQLFGDGWVVVGDAAQLNNAVHREGSNLAMTSGRIAG 329
Query: 194 EAGFGVLHE-----DSNMEIYWDTLQKSWVWQELQRARN 227
EA + N+ +Y L KS+V ++L++ ++
Sbjct: 330 EAIAAIKSRKHPMTSDNLSLYKAMLDKSFVLKDLRKYKD 368
>sp|P53572|FIXC_AZOVI Protein FixC OS=Azotobacter vinelandii GN=fixC PE=3 SV=1
Length = 427
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 21/231 (9%)
Query: 14 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGK 69
++G E+R +LA+G L+ K F S Q + +AL +KE+ E E +
Sbjct: 145 RQGGEVRADAVILADGVNSRLAVK--AGF-----SRDQPENWALAVKEIHFLPQETMEAR 197
Query: 70 HNPGE--ILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYHNPFLNPYEEFQKFK 126
N GE + +D G FLY N I LG+ L ++ ++PYE + K
Sbjct: 198 FNIGEEEAAIEMAGKIDAGMMGTGFLY-TNKESITLGVGCMLSDFKQQKISPYELLDRMK 256
Query: 127 HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAM 186
HP+I PL+ G + +Y A + EGG +IP V+ G +I A + +G++ AM
Sbjct: 257 THPSIAPLIAGSDMKEYAAHLIPEGGYNAIP-QVYGDGWMIAGDAPIRHGIHREGSNLAM 315
Query: 187 KSGMLAAEAGFGVLHED-----SNMEIYWDTLQKSWVWQELQRARNYRPAF 232
+GMLAA+ + D +N+ Y L S+V ++L++ R F
Sbjct: 316 TTGMLAAQTLVELRAADKPFSAANLAEYKKKLDDSFVMKDLKKYRRMPEIF 366
>sp|P10331|FIXC_BRAJA Protein FixC OS=Bradyrhizobium japonicum (strain USDA 110) GN=fixC
PE=3 SV=2
Length = 435
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 24/232 (10%)
Query: 14 QRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV----WEIDEGK 69
+R E+ + +LAEG G L + LR + + AL +KE+ E E +
Sbjct: 149 RRDGEIHADVVVLAEGVNGLLGTRA----GLRARPAPDN--VALAVKEMHFLPRETIEAR 202
Query: 70 HN----PGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQK 124
N G ++ G + + G F+Y N I+LG+ + ++ PY +
Sbjct: 203 FNLKGDEGVVIEAAG-TISRGMTGMGFIY-ANKECISLGIGCLVADFQRTGQTPYGLLDE 260
Query: 125 FKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHT 184
FK HP++ PL+ G V +Y A + EGG +SIP G ++G AA N +G++
Sbjct: 261 FKRHPSVAPLIAGSEVKEYSAHLIPEGGYKSIPQLYGEGWVVVGDAAQLNNAVHREGSNL 320
Query: 185 AMKSGMLAAEAGFGVLHED------SNMEIYWDTLQKSWVWQELQRARNYRP 230
AM SG +AAEA G++ +N+ IY L S+V ++L++ ++ P
Sbjct: 321 AMTSGRIAAEA-IGLVKSRGEPMSATNLSIYKKMLDDSFVIKDLKKYKDLPP 371
>sp|P09820|FIXC_RHIME Protein FixC OS=Rhizobium meliloti (strain 1021) GN=fixC PE=3 SV=1
Length = 435
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 80 GWPLDQKTYGGSFLYHMNDRQIALGL-VVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGG 138
G + + G FLY N I+LG+ + N+ PY FK HP+I+PL+ G
Sbjct: 216 GGTISRGMAGLGFLY-TNKESISLGIGCLISNFAETMERPYALLDAFKRHPSIQPLIAGS 274
Query: 139 TVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEA--- 195
V +Y A + EGG +IP G ++G AA N +G++ AM SG +A EA
Sbjct: 275 EVKEYAAHLIPEGGFNAIPRLCGNGWVVVGDAAQLNNAVHREGSNLAMASGRMAGEAISI 334
Query: 196 --GFGVLHEDSNMEIYWDTLQKSWVWQELQRARN 227
G + + +++ +Y L KS+V ++L + ++
Sbjct: 335 IKSRGGVMDKASLSLYKTMLDKSFVVEDLSKQKD 368
>sp|Q8Z9K9|FIXC_SALTI Protein FixC OS=Salmonella typhi GN=fixC PE=3 SV=1
Length = 428
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G L ++ +LA+G L+EKL + ++ A H A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDILEAKVVILADGVNSLLAEKL----GMAKRVEASH--VAVGVKEL 188
Query: 63 WEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP 114
E+ + + N G G P D GG FLY N+ ++LGLV L++
Sbjct: 189 IELPKSVIEDRFQLQGNEGAACLFAGAPTD-GLMGGGFLYT-NETTLSLGLVCGLHHLKD 246
Query: 115 FLNPY-EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + FK HPA+ PL+ GG +V+Y A + E G+ P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGM 306
Query: 174 -LNVP-KIKGTHTAMKSGMLAAEAGFGVLHED 203
+N+ I+G A+ +G AA+ + D
Sbjct: 307 CMNLGFTIRGMDLAISAGEAAAKTVLSAMKRD 338
>sp|Q8ZRW9|FIXC_SALTY Protein FixC OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=fixC PE=3 SV=1
Length = 428
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G L ++ +LA+G L+EKL + ++ A H A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDILEAKVVILADGVNSLLAEKL----GMTKRVEASH--VAVGVKEL 188
Query: 63 WEID--------EGKHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNP 114
E+ + + N G G P D GG FLY N+ ++LGLV L++
Sbjct: 189 IELPKLVIEDRFQLQGNEGAACLFAGAPTD-GLMGGGFLYT-NETTLSLGLVCGLHHLKD 246
Query: 115 FLNPY-EEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + FK HPA+ PL+ GG +V+Y A + E G+ P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYAAHVVPEAGMNMQPELVGDGVLIAGDAAGM 306
Query: 174 -LNVP-KIKGTHTAMKSGMLAAEAGFGVLHED 203
+N+ I+G A+ +G AA+ + D
Sbjct: 307 CMNLGFTIRGMDLAISAGEAAAKTVLSAMKRD 338
>sp|P77337|YDIS_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YdiS
OS=Escherichia coli (strain K12) GN=ydiS PE=3 SV=1
Length = 429
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 3 IAKDGSKKENFQRGVE-LRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKE 61
+ ++G+K Q G + L + +LA+G L ++ + S H YA+G+KE
Sbjct: 134 LVREGNKVTGVQAGDDILEANVVILADGVNSMLG----RSLGMVPASDPHH--YAVGVKE 187
Query: 62 VWEIDEGKHNP--------GEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVAL-NYH 112
V + + N G G P D GG FLY N I+LGLV L +
Sbjct: 188 VIGLTPEQINDRFNITGEEGAAWLFAGSPSD-GLMGGGFLY-TNKDSISLGLVCGLGDIA 245
Query: 113 NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAG 172
+ + + + FK HPAI+PL+ GG +++Y A + EGGL +P V G I+G AAG
Sbjct: 246 HAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAG 305
Query: 173 F 173
F
Sbjct: 306 F 306
>sp|Q46904|YGCN_ECOLI Probable electron transfer flavoprotein-quinone oxidoreductase YgcN
OS=Escherichia coli (strain K12) GN=ygcN PE=3 SV=2
Length = 423
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 19 LRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--------KH 70
LR R +LAEG L+E+ R A ALGIKEV ++ ++
Sbjct: 145 LRARYVVLAEGANSVLAER--HGLVTRPAGEAM----ALGIKEVLSLETSAIEERFHLEN 198
Query: 71 NPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEF-QKFKHHP 129
N G L G D GG+FLY N + ++LG+V L+ P E +FK HP
Sbjct: 199 NEGAALLFSGRICDDLP-GGAFLY-TNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHP 256
Query: 130 AIKPLLEGGTVVQYGARTLNEGGLQSIPYP------VFPGGAIIGCAAGFLNVPKIKGTH 183
A++PL++ ++YGA + EGGL S+P + G A+ C ++V +G
Sbjct: 257 AVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISV---RGMD 313
Query: 184 TAMKSGMLAAEAGFGVLH--EDSNM-EIYWDTLQKSWVWQELQR 224
A+ AA+ E N+ +Y +++S +W LQR
Sbjct: 314 MALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQR 357
>sp|Q83SQ7|FIXC_SHIFL Protein FixC OS=Shigella flexneri GN=fixC PE=3 SV=1
Length = 428
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G + + LLA+G L+EKL +++ A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDVIEAKTVLLADGVNSILAEKLGMAKRVKPTD------VAVGVKEL 188
Query: 63 WEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HN 113
E+ + + N G G P D GG FLY N+ ++LGLV L++ H+
Sbjct: 189 IELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHD 246
Query: 114 PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|Q7AHT0|FIXC_ECO57 Protein FixC OS=Escherichia coli O157:H7 GN=fixC PE=3 SV=1
Length = 428
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G + + +LA+G L+EKL +++ + A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTN------VAVGVKEL 188
Query: 63 WEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HN 113
E+ + + N G G P D GG FLY N+ ++LGLV L++ H+
Sbjct: 189 IELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHD 246
Query: 114 PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P68644|FIXC_ECOLI Protein FixC OS=Escherichia coli (strain K12) GN=fixC PE=3 SV=1
Length = 428
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G + + +LA+G L+EKL +++ A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTD------VAVGVKEL 188
Query: 63 WEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HN 113
E+ + + N G G P D GG FLY N+ ++LGLV L++ H+
Sbjct: 189 IELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHD 246
Query: 114 PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P68645|FIXC_ECOL6 Protein FixC OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=fixC PE=3 SV=1
Length = 428
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 3 IAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEV 62
+ +DG G + + +LA+G L+EKL +++ A+G+KE+
Sbjct: 135 VQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTD------VAVGVKEL 188
Query: 63 WEIDEG--------KHNPGEILHTLGWPLDQKTYGGSFLYHMNDRQIALGLVVALNY-HN 113
E+ + + N G G P D GG FLY N+ ++LGLV L++ H+
Sbjct: 189 IELPKSVIEDRFQLQGNQGAACLFAGSPTD-GLMGGGFLY-TNENTLSLGLVCGLHHLHD 246
Query: 114 PFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGF 173
+ + + FK HPA+ PL+ GG +V+Y A + E G+ +P V G I G AAG
Sbjct: 247 AKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGM 306
>sp|P09821|FIXC_RHILE Protein FixC (Fragment) OS=Rhizobium leguminosarum GN=fixC PE=3
SV=1
Length = 163
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 137 GGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAG 196
G + +Y A + EGG ++IP G ++G AA N +G++ AM SG++A EA
Sbjct: 1 GSEIKEYAAHLIPEGGFKAIPQLFGNGWVVVGDAAQLNNAVHREGSNLAMTSGLMAGEAI 60
Query: 197 F-----GVLHEDSNMEIYWDTLQKSWVWQELQRARN 227
F G L N+ +Y L KS+V ++L + ++
Sbjct: 61 FQIKSRGGLMTKRNLSLYKGMLGKSFVMKDLMKHKD 96
>sp|P26485|FIXX_AZOC5 Ferredoxin-like protein OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=fixX PE=4 SV=1
Length = 97
Score = 41.6 bits (96), Expect = 0.010, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 307 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACD-I 365
AH+++R P P + CPAR YE +E Q+++ ++ C+ C C I
Sbjct: 24 AHIKVRPHTEP-----PPALLSMLKLCPARCYEL--NEAGQVEVTVDG--CVECGTCRVI 74
Query: 366 KDPKQNIKWTVPEGGGG 382
+P +I+WT P GG G
Sbjct: 75 AEPSGDIEWTYPRGGFG 91
>sp|P10326|FIXX_BRAJA Ferredoxin-like protein OS=Bradyrhizobium japonicum (strain USDA
110) GN=fixX PE=4 SV=1
Length = 98
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 308 HLRLRDPKIP--ELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACD- 364
H+R+R K P +L+ L + CPAR YE + ++++ C+ C C
Sbjct: 26 HVRVRAHKTPSPQLLTL-------LKACPARCYEL----NDNGQVEVTVDGCIECGTCRV 74
Query: 365 IKDPKQNIKWTVPEGGGG 382
I +P +I+W+ P GG G
Sbjct: 75 IAEPTGDIEWSHPRGGYG 92
>sp|P08710|FIXX_RHILT Ferredoxin-like protein OS=Rhizobium leguminosarum bv. trifolii
GN=fixX PE=4 SV=1
Length = 98
Score = 37.0 bits (84), Expect = 0.23, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 330 SRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIK-DPKQNIKWTVPEGGGG 382
++ CPA+ Y+ ++ ++ I + CL C C++ P +I+WT P GG G
Sbjct: 43 TQVCPAKCYQL----NDRRQVIIVSDGCLECGTCNVLCGPDGDIEWTYPRGGFG 92
>sp|P09823|FIXX_RHILE Ferredoxin-like protein OS=Rhizobium leguminosarum GN=fixX PE=4
SV=1
Length = 98
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 330 SRYCPARVYEYVPDEKNQL-KLQINAQNCLHCKACDI-KDPKQNIKWTVPEGGGG 382
++ CPA+ YE N++ ++ I + CL C C + + +IKW P GG G
Sbjct: 43 TQICPAKCYEV-----NEIGQVAIVSDGCLECGTCRVLAEASGDIKWNYPRGGFG 92
>sp|P41732|TSN7_HUMAN Tetraspanin-7 OS=Homo sapiens GN=TSPAN7 PE=1 SV=2
Length = 249
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 190 MLAAEAGFGVLHE--DSNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEH 247
++A +GF HE D+ + Y D +Q E RA ++ L+ CG+++
Sbjct: 103 LVAGISGFVFRHEIKDTFLRTYTDAMQTYNGNDERSRAVDHVQ-------RSLSCCGVQN 155
Query: 248 YILRGKSPYTLKHGKP 263
Y SPY L+HG P
Sbjct: 156 YTNWSTSPYFLEHGIP 171
>sp|Q7YQL0|TSN7_PANTR Tetraspanin-7 OS=Pan troglodytes GN=TSPAN7 PE=2 SV=1
Length = 244
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 190 MLAAEAGFGVLHE--DSNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEH 247
++A +GF HE D+ + Y D +Q E RA ++ L+ CG+++
Sbjct: 98 LVAGISGFVFRHEIKDTFLRTYTDAMQTYNGNDERSRAVDHVQ-------RSLSCCGVQN 150
Query: 248 YILRGKSPYTLKHGKP-----DHEATDAARLHS-PIEYPKPDGVLSFDVPTSLHRSN 298
Y SPY L+HG P + + LH+ + K + +D+ TS +N
Sbjct: 151 YTNWSTSPYFLEHGIPPSCCMNETDCNPQDLHNLTVAATKVNQKGCYDLVTSFMETN 207
>sp|Q62283|TSN7_MOUSE Tetraspanin-7 OS=Mus musculus GN=Tspan7 PE=2 SV=2
Length = 249
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 15/117 (12%)
Query: 190 MLAAEAGFGVLHE--DSNMEIYWDTLQKSWVWQELQRARNYRPAFEYGLLPGLAICGLEH 247
++A +GF HE D+ + Y D +Q E RA ++ L+ CG+++
Sbjct: 103 LVAGISGFVFRHEIKDTFLRTYTDAMQNYNGNDERSRAVDHVQ-------RSLSCCGVQN 155
Query: 248 YILRGKSPYTLKHGKP-----DHEATDAARLHS-PIEYPKPDGVLSFDVPTSLHRSN 298
Y SPY L HG P + + LH+ + K + +D+ TS +N
Sbjct: 156 YTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVAATKVNQKGCYDLVTSFMETN 212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,585,448
Number of Sequences: 539616
Number of extensions: 7970577
Number of successful extensions: 16090
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 16005
Number of HSP's gapped (non-prelim): 33
length of query: 388
length of database: 191,569,459
effective HSP length: 119
effective length of query: 269
effective length of database: 127,355,155
effective search space: 34258536695
effective search space used: 34258536695
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)