Query 016489
Match_columns 388
No_of_seqs 300 out of 1801
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:25:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016489.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016489hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 3.7E-83 1.3E-87 673.9 28.5 385 2-388 187-584 (584)
2 3oz2_A Digeranylgeranylglycero 99.9 7.2E-22 2.5E-26 193.5 20.4 199 17-232 147-350 (397)
3 3cgv_A Geranylgeranyl reductas 99.8 1.8E-18 6.1E-23 170.5 21.6 203 15-233 145-351 (397)
4 3atr_A Conserved archaeal prot 99.8 3.1E-17 1E-21 166.4 23.2 205 15-232 143-355 (453)
5 3nix_A Flavoprotein/dehydrogen 99.7 7E-17 2.4E-21 160.9 15.5 192 14-216 146-344 (421)
6 3e1t_A Halogenase; flavoprotei 99.6 5E-15 1.7E-19 152.7 18.9 188 17-217 157-355 (512)
7 3rp8_A Flavoprotein monooxygen 99.6 4.4E-14 1.5E-18 140.6 18.1 207 7-233 156-371 (407)
8 3i3l_A Alkylhalidase CMLS; fla 99.5 1.3E-13 4.4E-18 145.0 16.7 196 7-217 159-367 (591)
9 1k0i_A P-hydroxybenzoate hydro 99.4 6.3E-12 2.2E-16 124.1 16.5 200 14-232 143-350 (394)
10 2x3n_A Probable FAD-dependent 99.4 3.5E-12 1.2E-16 126.4 12.9 204 12-233 146-360 (399)
11 3alj_A 2-methyl-3-hydroxypyrid 99.3 5.7E-12 2E-16 124.2 10.7 185 12-216 140-335 (379)
12 2weu_A Tryptophan 5-halogenase 99.3 3.2E-11 1.1E-15 123.7 15.7 183 5-217 202-393 (511)
13 3fmw_A Oxygenase; mithramycin, 99.3 2E-10 6.8E-15 120.2 21.6 199 14-233 188-395 (570)
14 3c96_A Flavin-containing monoo 99.3 1.6E-10 5.3E-15 115.2 18.6 181 17-216 154-357 (410)
15 2e4g_A Tryptophan halogenase; 99.2 8.8E-11 3E-15 122.1 15.3 189 6-217 225-416 (550)
16 2qa1_A PGAE, polyketide oxygen 99.2 9.3E-10 3.2E-14 113.2 22.3 186 9-215 139-333 (500)
17 3ihg_A RDME; flavoenzyme, anth 99.2 7.3E-10 2.5E-14 114.4 21.6 190 9-216 157-358 (535)
18 2qa2_A CABE, polyketide oxygen 99.2 1.1E-09 3.9E-14 112.5 22.0 183 12-215 143-334 (499)
19 2pyx_A Tryptophan halogenase; 99.2 3.9E-11 1.3E-15 123.9 10.5 190 6-217 206-401 (526)
20 2aqj_A Tryptophan halogenase, 99.2 5.7E-11 2E-15 122.9 11.5 185 6-217 195-385 (538)
21 1pn0_A Phenol 2-monooxygenase; 99.2 1.1E-09 3.7E-14 116.6 20.8 197 17-233 215-424 (665)
22 4hb9_A Similarities with proba 99.2 1.1E-09 3.7E-14 107.5 18.0 59 157-215 306-368 (412)
23 2xdo_A TETX2 protein; tetracyc 99.1 7E-10 2.4E-14 110.0 15.3 185 9-216 159-370 (398)
24 2dkh_A 3-hydroxybenzoate hydro 99.0 9E-09 3.1E-13 108.9 20.6 196 17-232 196-414 (639)
25 3c4a_A Probable tryptophan hyd 99.0 2.8E-09 9.7E-14 105.1 14.6 76 156-232 256-331 (381)
26 2vou_A 2,6-dihydroxypyridine h 99.0 3.2E-09 1.1E-13 105.1 14.6 60 156-215 293-352 (397)
27 2r0c_A REBC; flavin adenine di 98.9 4.1E-08 1.4E-12 101.9 19.2 175 17-216 181-366 (549)
28 1jb0_C Photosystem I iron-sulf 98.9 2.9E-10 1E-14 87.2 1.4 69 307-382 1-72 (80)
29 7fd1_A FD1, protein (7-Fe ferr 98.8 1.2E-09 4.1E-14 88.9 3.4 56 312-376 3-58 (106)
30 3eun_A Ferredoxin; electron tr 98.8 2E-09 6.7E-14 83.5 3.5 54 311-375 2-61 (82)
31 1xer_A Ferredoxin; electron tr 98.8 1.1E-09 3.7E-14 88.3 1.9 64 307-377 36-103 (103)
32 1dwl_A Ferredoxin I; electron 98.8 6.6E-09 2.2E-13 74.6 5.7 57 308-375 1-59 (59)
33 2fdn_A Ferredoxin; electron tr 98.8 3.4E-09 1.2E-13 75.5 3.8 50 314-374 5-54 (55)
34 1bc6_A 7-Fe ferredoxin; electr 98.8 3.3E-09 1.1E-13 81.1 3.6 55 312-375 3-57 (77)
35 2v2k_A Ferredoxin; iron, trans 98.8 3.5E-09 1.2E-13 85.9 3.6 54 313-375 4-57 (105)
36 2fgo_A Ferredoxin; allochromat 98.7 5E-09 1.7E-13 81.1 3.6 55 311-376 2-62 (82)
37 1h98_A Ferredoxin; electron tr 98.7 3.3E-09 1.1E-13 81.4 2.3 54 313-375 4-57 (78)
38 1rgv_A Ferredoxin; electron tr 98.7 5.4E-09 1.8E-13 80.5 2.3 53 312-375 3-61 (80)
39 3gyx_B Adenylylsulfate reducta 98.7 6.6E-09 2.3E-13 91.8 3.0 61 312-375 4-64 (166)
40 1jnr_B Adenylylsulfate reducta 98.7 7.3E-09 2.5E-13 90.0 3.0 56 312-375 5-65 (150)
41 2zvs_A Uncharacterized ferredo 98.5 1.6E-08 5.3E-13 78.9 1.4 53 312-375 3-62 (85)
42 3i9v_9 NADH-quinone oxidoreduc 98.5 3.2E-08 1.1E-12 87.6 2.9 57 313-375 49-116 (182)
43 3ihm_A Styrene monooxygenase A 98.5 4.3E-06 1.5E-10 83.8 16.9 180 20-213 155-359 (430)
44 1dax_A Ferredoxin I; electron 98.4 2.3E-08 7.8E-13 73.3 0.1 55 312-375 6-62 (64)
45 1rof_A Ferredoxin; electron tr 98.4 2.7E-08 9.2E-13 71.5 -0.3 56 309-375 3-59 (60)
46 1f2g_A Ferredoxin II; electron 98.4 6E-08 2E-12 69.5 0.5 52 312-374 4-57 (58)
47 2vpz_B NRFC protein; oxidoredu 98.3 2.3E-07 7.7E-12 84.0 3.3 64 306-377 46-110 (195)
48 1hfe_L Protein (Fe-only hydrog 98.3 1.2E-07 4E-12 95.7 1.4 56 309-374 27-83 (421)
49 1iqz_A Ferredoxin; iron-sulfer 98.3 1.7E-07 5.8E-12 72.2 1.5 55 312-377 6-71 (81)
50 2ivf_B Ethylbenzene dehydrogen 98.2 5.4E-07 1.8E-11 88.6 2.4 59 312-377 146-204 (352)
51 3or1_B Sulfite reductase beta; 98.1 2.4E-07 8.1E-12 92.4 -0.7 57 313-373 214-274 (386)
52 1ti6_B Pyrogallol hydroxytrans 98.1 1.3E-06 4.5E-11 83.0 3.9 57 313-378 64-120 (274)
53 1kqf_B FDH-N beta S, formate d 98.1 1.2E-06 4.1E-11 84.1 3.6 56 313-376 96-152 (294)
54 1q16_B Respiratory nitrate red 98.1 9.1E-07 3.1E-11 90.7 2.6 59 312-377 179-237 (512)
55 3mm5_B Sulfite reductase, diss 98.1 5.5E-07 1.9E-11 89.1 0.0 54 313-373 203-257 (366)
56 1sj1_A Ferredoxin; thermostabi 98.0 5.6E-07 1.9E-11 65.8 -0.5 54 312-375 6-64 (66)
57 3j16_B RLI1P; ribosome recycli 97.9 2.2E-06 7.5E-11 90.2 2.2 63 307-377 6-76 (608)
58 2c42_A Pyruvate-ferredoxin oxi 97.9 5E-06 1.7E-10 93.8 4.3 59 311-375 682-764 (1231)
59 3mm5_A Sulfite reductase, diss 97.8 5.2E-06 1.8E-10 83.3 1.4 41 327-372 261-301 (418)
60 3c8y_A Iron hydrogenase 1; dit 97.8 2E-06 6.9E-11 89.9 -1.8 57 311-375 141-208 (574)
61 1gte_A Dihydropyrimidine dehyd 97.7 7.9E-06 2.7E-10 90.9 2.5 57 311-377 947-1007(1025)
62 1ti6_B Pyrogallol hydroxytrans 97.7 1.2E-05 4.1E-10 76.4 2.7 54 309-375 91-157 (274)
63 1h0h_B Formate dehydrogenase ( 97.6 8.7E-06 3E-10 74.5 0.5 57 313-376 68-129 (214)
64 3or1_A Sulfite reductase alpha 97.5 2.8E-05 9.4E-10 78.3 2.5 40 327-371 278-317 (437)
65 2ivf_B Ethylbenzene dehydrogen 97.5 4.1E-05 1.4E-09 75.1 2.9 53 310-375 177-238 (352)
66 2vpz_B NRFC protein; oxidoredu 97.4 2.9E-05 1E-09 70.0 0.8 52 310-375 83-143 (195)
67 3i9v_3 NADH-quinone oxidoreduc 97.4 3.7E-05 1.3E-09 83.2 1.3 56 311-375 175-238 (783)
68 1q16_B Respiratory nitrate red 97.3 8.9E-05 3E-09 76.0 2.8 52 311-375 211-271 (512)
69 1h0h_B Formate dehydrogenase ( 97.3 3.4E-05 1.2E-09 70.6 -0.5 52 311-375 102-164 (214)
70 1kqf_B FDH-N beta S, formate d 97.2 7.8E-05 2.7E-09 71.4 0.8 52 311-375 127-187 (294)
71 3kkj_A Amine oxidase, flavin-c 97.1 0.00032 1.1E-08 62.0 4.3 37 160-202 293-329 (336)
72 1ryi_A Glycine oxidase; flavop 97.0 0.002 6.8E-08 62.3 9.4 153 11-198 198-361 (382)
73 3bk7_A ABC transporter ATP-bin 97.0 0.00024 8.1E-09 74.7 2.9 62 307-374 19-86 (607)
74 2pa8_D DNA-directed RNA polyme 97.0 0.0002 6.8E-09 67.6 1.7 45 326-375 176-220 (265)
75 1yvv_A Amine oxidase, flavin-c 96.7 0.05 1.7E-06 51.2 16.1 36 161-202 294-329 (336)
76 3fpz_A Thiazole biosynthetic e 96.3 0.0012 4.2E-08 63.1 1.7 42 160-201 282-325 (326)
77 3eun_A Ferredoxin; electron tr 96.3 0.0025 8.4E-08 48.6 3.1 25 351-375 2-26 (82)
78 1dwl_A Ferredoxin I; electron 96.2 0.0031 1.1E-07 44.2 3.4 26 349-375 1-26 (59)
79 1xer_A Ferredoxin; electron tr 96.2 0.0019 6.3E-08 51.2 2.1 28 349-376 37-64 (103)
80 1dax_A Ferredoxin I; electron 96.0 0.0017 5.8E-08 46.7 1.1 26 349-375 3-28 (64)
81 1jb0_C Photosystem I iron-sulf 96.0 0.0028 9.7E-08 47.5 2.2 28 349-376 2-29 (80)
82 2zvs_A Uncharacterized ferredo 95.9 0.0034 1.2E-07 48.1 2.6 25 351-375 2-26 (85)
83 1iqz_A Ferredoxin; iron-sulfer 95.8 0.0031 1.1E-07 47.8 1.9 26 349-375 3-28 (81)
84 2fgo_A Ferredoxin; allochromat 95.8 0.0035 1.2E-07 47.6 2.1 24 352-375 3-26 (82)
85 1sj1_A Ferredoxin; thermostabi 95.8 0.0038 1.3E-07 44.8 2.1 26 349-375 3-28 (66)
86 1rgv_A Ferredoxin; electron tr 95.7 0.0032 1.1E-07 47.6 1.6 24 352-375 3-26 (80)
87 2fdn_A Ferredoxin; electron tr 95.7 0.0058 2E-07 42.5 2.7 25 350-375 2-26 (55)
88 2gag_B Heterotetrameric sarcos 95.3 0.12 4.1E-06 49.9 11.7 160 7-198 205-374 (405)
89 1rof_A Ferredoxin; electron tr 95.1 0.0064 2.2E-07 42.6 1.3 25 349-374 2-26 (60)
90 1bc6_A 7-Fe ferredoxin; electr 95.0 0.013 4.5E-07 43.7 2.9 25 351-375 2-28 (77)
91 2wdq_B Succinate dehydrogenase 94.9 0.0019 6.6E-08 59.5 -2.6 55 311-371 143-220 (238)
92 1f2g_A Ferredoxin II; electron 94.8 0.0043 1.5E-07 43.5 -0.3 23 350-374 2-24 (58)
93 1h98_A Ferredoxin; electron tr 94.4 0.012 4.2E-07 44.1 1.3 25 351-375 2-28 (78)
94 7fd1_A FD1, protein (7-Fe ferr 94.2 0.013 4.5E-07 46.7 1.3 25 351-375 2-28 (106)
95 3i9v_9 NADH-quinone oxidoreduc 94.1 0.014 4.7E-07 50.8 1.3 24 353-376 49-72 (182)
96 1kf6_B Fumarate reductase iron 93.8 0.0031 1.1E-07 58.2 -3.7 54 312-371 143-218 (243)
97 2v2k_A Ferredoxin; iron, trans 93.6 0.021 7.1E-07 45.3 1.3 25 351-375 2-28 (105)
98 2c42_A Pyruvate-ferredoxin oxi 93.3 0.02 6.8E-07 64.7 1.0 45 331-375 662-706 (1231)
99 1y56_B Sarcosine oxidase; dehy 93.3 1 3.4E-05 43.0 13.0 37 162-198 313-354 (382)
100 2h88_B Succinate dehydrogenase 92.7 0.014 4.6E-07 54.3 -1.2 54 312-371 153-229 (252)
101 1hfe_L Protein (Fe-only hydrog 92.5 0.034 1.1E-06 55.7 1.3 27 349-375 27-53 (421)
102 3cf4_A Acetyl-COA decarboxylas 92.0 0.0079 2.7E-07 65.1 -4.4 55 313-373 413-471 (807)
103 3nyc_A D-arginine dehydrogenas 91.9 0.5 1.7E-05 44.8 8.8 159 10-197 187-356 (381)
104 2bs2_B Quinol-fumarate reducta 90.1 0.026 8.9E-07 51.9 -2.3 53 313-371 147-222 (241)
105 3k7m_X 6-hydroxy-L-nicotine ox 88.9 3.8 0.00013 39.6 12.3 34 162-198 391-424 (431)
106 3vr8_B Iron-sulfur subunit of 88.0 0.1 3.5E-06 49.4 0.1 17 354-370 236-252 (282)
107 3ps9_A TRNA 5-methylaminomethy 86.9 1.4 4.6E-05 46.3 8.0 23 175-197 621-643 (676)
108 2gf3_A MSOX, monomeric sarcosi 86.1 5.3 0.00018 37.8 11.2 38 161-198 321-363 (389)
109 3pvc_A TRNA 5-methylaminomethy 85.4 2 6.9E-05 45.1 8.5 23 175-197 625-647 (689)
110 3c8y_A Iron hydrogenase 1; dit 83.8 0.19 6.6E-06 52.2 -0.3 27 349-375 139-169 (574)
111 1gte_A Dihydropyrimidine dehyd 82.8 0.26 9E-06 54.6 0.3 29 348-376 944-975 (1025)
112 3da1_A Glycerol-3-phosphate de 82.5 14 0.00046 37.8 13.1 167 17-201 217-393 (561)
113 2oln_A NIKD protein; flavoprot 81.7 15 0.0005 35.0 12.3 21 12-32 188-208 (397)
114 2qcu_A Aerobic glycerol-3-phos 81.5 11 0.00039 37.6 11.9 107 90-200 255-373 (501)
115 3dme_A Conserved exported prot 81.5 29 0.00099 32.0 14.2 30 13-45 188-220 (369)
116 3fbs_A Oxidoreductase; structu 80.6 1.5 5.2E-05 39.8 4.6 39 159-202 255-293 (297)
117 3itj_A Thioredoxin reductase 1 79.1 2 6.7E-05 39.8 4.9 40 159-202 297-336 (338)
118 3f8d_A Thioredoxin reductase ( 77.8 2.2 7.6E-05 39.1 4.8 42 159-202 277-318 (323)
119 3i9v_3 NADH-quinone oxidoreduc 77.4 0.68 2.3E-05 49.8 1.3 27 349-375 173-203 (783)
120 3or1_B Sulfite reductase beta; 77.1 0.47 1.6E-05 46.8 -0.1 27 349-375 210-239 (386)
121 4gcm_A TRXR, thioredoxin reduc 76.6 2.7 9.1E-05 38.9 5.0 39 159-201 268-306 (312)
122 4dgk_A Phytoene dehydrogenase; 76.5 1.5 5.2E-05 43.5 3.5 37 161-202 457-493 (501)
123 3jsk_A Cypbp37 protein; octame 75.9 2.3 7.7E-05 41.2 4.4 26 16-41 235-260 (344)
124 4a5l_A Thioredoxin reductase; 74.3 3.4 0.00012 37.9 5.1 40 158-201 273-312 (314)
125 3mm5_B Sulfite reductase, diss 72.8 0.5 1.7E-05 46.2 -1.1 28 349-376 199-229 (366)
126 3mm5_A Sulfite reductase, diss 71.4 0.84 2.9E-05 45.5 0.1 27 349-375 242-275 (418)
127 1kf6_B Fumarate reductase iron 71.3 0.33 1.1E-05 44.4 -2.8 21 352-372 143-163 (243)
128 2ywl_A Thioredoxin reductase r 71.1 4.6 0.00016 34.0 4.8 41 158-202 132-172 (180)
129 1trb_A Thioredoxin reductase; 71.0 4.2 0.00014 37.4 4.9 40 159-202 276-315 (320)
130 2h88_B Succinate dehydrogenase 70.5 1.1 3.6E-05 41.3 0.6 19 353-371 154-172 (252)
131 2bs2_B Quinol-fumarate reducta 70.4 0.28 9.7E-06 44.8 -3.4 20 353-372 147-166 (241)
132 3r9u_A Thioredoxin reductase; 70.1 3.9 0.00013 37.3 4.4 39 159-201 274-312 (315)
133 2wdq_B Succinate dehydrogenase 69.6 1.2 3.9E-05 40.5 0.6 21 352-372 144-164 (238)
134 3cty_A Thioredoxin reductase; 69.3 5.2 0.00018 36.9 5.1 40 159-202 278-317 (319)
135 3gyx_B Adenylylsulfate reducta 68.0 1.6 5.4E-05 37.6 1.1 27 311-343 40-66 (166)
136 1jnr_B Adenylylsulfate reducta 67.6 1.6 5.6E-05 36.8 1.1 26 311-342 41-66 (150)
137 3lzw_A Ferredoxin--NADP reduct 67.5 5.2 0.00018 36.8 4.7 42 159-202 275-316 (332)
138 2q0l_A TRXR, thioredoxin reduc 65.8 6.5 0.00022 35.9 5.0 39 159-201 271-309 (311)
139 3i6d_A Protoporphyrinogen oxid 64.2 5.8 0.0002 38.5 4.5 34 161-200 435-468 (470)
140 1vdc_A NTR, NADPH dependent th 63.7 6.1 0.00021 36.5 4.4 39 160-202 286-324 (333)
141 3axb_A Putative oxidoreductase 63.5 16 0.00053 35.6 7.5 37 6-45 226-264 (448)
142 2ywl_A Thioredoxin reductase r 63.1 4 0.00014 34.3 2.8 28 13-45 92-119 (180)
143 3nlc_A Uncharacterized protein 63.0 6.8 0.00023 40.2 4.9 36 160-200 507-542 (549)
144 2jae_A L-amino acid oxidase; o 62.8 6.1 0.00021 39.0 4.4 38 161-202 450-487 (489)
145 1fl2_A Alkyl hydroperoxide red 62.6 7.4 0.00025 35.5 4.7 40 159-202 267-306 (310)
146 2cul_A Glucose-inhibited divis 62.5 6.1 0.00021 35.1 4.0 35 160-200 197-231 (232)
147 3vr8_B Iron-sulfur subunit of 62.3 2.1 7.1E-05 40.3 0.8 18 354-371 179-196 (282)
148 3or1_A Sulfite reductase alpha 61.9 1.8 6.1E-05 43.3 0.3 27 349-375 243-292 (437)
149 2q7v_A Thioredoxin reductase; 61.8 7.6 0.00026 35.9 4.6 39 160-202 275-313 (325)
150 3nlc_A Uncharacterized protein 61.6 4 0.00014 42.0 2.8 51 6-60 250-301 (549)
151 1sez_A Protoporphyrinogen oxid 60.8 7.5 0.00026 38.5 4.7 36 161-202 460-495 (504)
152 4fk1_A Putative thioredoxin re 59.8 5.6 0.00019 36.6 3.3 40 158-201 261-300 (304)
153 2bry_A NEDD9 interacting prote 59.4 5.8 0.0002 39.9 3.5 45 158-202 389-434 (497)
154 2e1m_C L-glutamate oxidase; L- 59.2 5.1 0.00017 34.7 2.7 37 162-202 118-154 (181)
155 2a87_A TRXR, TR, thioredoxin r 57.6 10 0.00034 35.3 4.7 40 159-202 278-317 (335)
156 2zbw_A Thioredoxin reductase; 55.0 12 0.00042 34.4 4.9 41 160-202 278-318 (335)
157 2ivd_A PPO, PPOX, protoporphyr 54.0 7.3 0.00025 38.2 3.2 35 161-201 440-474 (478)
158 3h28_A Sulfide-quinone reducta 53.8 14 0.00049 35.9 5.3 43 160-202 285-334 (430)
159 2yg5_A Putrescine oxidase; oxi 52.7 11 0.00039 36.5 4.4 37 161-200 415-451 (453)
160 3lov_A Protoporphyrinogen oxid 52.7 11 0.00038 36.9 4.3 36 161-202 432-467 (475)
161 2gjc_A Thiazole biosynthetic e 52.2 13 0.00044 35.5 4.5 42 160-201 282-325 (326)
162 3sx6_A Sulfide-quinone reducta 52.1 15 0.0005 35.9 5.0 43 160-202 296-345 (437)
163 2gqw_A Ferredoxin reductase; f 52.0 9.6 0.00033 37.0 3.7 39 159-197 263-306 (408)
164 4eqs_A Coenzyme A disulfide re 51.1 11 0.00038 37.0 3.9 40 158-197 265-309 (437)
165 3qj4_A Renalase; FAD/NAD(P)-bi 50.8 8 0.00027 36.2 2.8 34 160-199 308-341 (342)
166 1igr_A Insulin-like growth fac 50.3 5 0.00017 40.6 1.3 27 315-341 216-242 (478)
167 3kd9_A Coenzyme A disulfide re 50.1 14 0.00047 36.2 4.5 39 159-197 270-313 (449)
168 3ab1_A Ferredoxin--NADP reduct 49.5 17 0.00057 34.0 4.9 41 160-202 289-329 (360)
169 2vvm_A Monoamine oxidase N; FA 49.2 16 0.00055 36.0 4.8 39 161-202 449-487 (495)
170 3ef6_A Toluene 1,2-dioxygenase 49.1 11 0.00039 36.4 3.7 40 158-198 264-308 (410)
171 1s3e_A Amine oxidase [flavin-c 48.8 15 0.00053 36.5 4.7 38 162-202 419-456 (520)
172 3ntd_A FAD-dependent pyridine 48.8 13 0.00044 37.5 4.1 40 159-198 293-337 (565)
173 1b37_A Protein (polyamine oxid 48.8 13 0.00045 36.5 4.1 38 162-202 423-460 (472)
174 2cdu_A NADPH oxidase; flavoenz 48.6 9.4 0.00032 37.4 3.0 39 159-197 272-315 (452)
175 3v76_A Flavoprotein; structura 48.3 12 0.00039 36.8 3.6 24 10-33 165-188 (417)
176 3h8l_A NADH oxidase; membrane 48.2 16 0.00056 35.0 4.6 39 160-201 298-336 (409)
177 3fg2_P Putative rubredoxin red 48.1 8.1 0.00028 37.3 2.4 39 159-197 265-308 (404)
178 3klj_A NAD(FAD)-dependent dehy 47.8 13 0.00046 35.8 3.9 38 159-197 255-292 (385)
179 1y56_A Hypothetical protein PH 47.2 16 0.00054 36.5 4.5 35 160-200 342-376 (493)
180 4a9w_A Monooxygenase; baeyer-v 47.1 13 0.00043 34.3 3.5 40 159-202 312-353 (357)
181 3d1c_A Flavin-containing putat 47.0 22 0.00075 33.1 5.2 42 160-202 299-340 (369)
182 3nks_A Protoporphyrinogen oxid 46.4 17 0.00056 35.5 4.4 32 161-198 441-472 (477)
183 3c4n_A Uncharacterized protein 45.7 8.5 0.00029 37.2 2.1 32 11-45 215-247 (405)
184 3vrd_B FCCB subunit, flavocyto 45.7 22 0.00074 33.9 5.1 42 159-202 284-325 (401)
185 1q1r_A Putidaredoxin reductase 45.5 13 0.00045 36.3 3.5 39 159-197 274-317 (431)
186 2i0z_A NAD(FAD)-utilizing dehy 45.2 9.7 0.00033 37.4 2.5 41 160-200 403-443 (447)
187 2pa8_D DNA-directed RNA polyme 45.1 14 0.00047 34.1 3.3 23 349-375 169-191 (265)
188 3cgb_A Pyridine nucleotide-dis 45.1 16 0.00055 36.2 4.1 38 160-197 309-351 (480)
189 3lxd_A FAD-dependent pyridine 44.8 14 0.00049 35.6 3.6 39 159-197 275-319 (415)
190 2bc0_A NADH oxidase; flavoprot 44.7 16 0.00055 36.3 4.0 38 160-197 317-359 (490)
191 3ics_A Coenzyme A-disulfide re 43.8 18 0.00061 36.8 4.3 40 159-198 308-352 (588)
192 1hyu_A AHPF, alkyl hydroperoxi 43.7 20 0.0007 36.0 4.7 39 160-202 479-517 (521)
193 3j16_B RLI1P; ribosome recycli 42.4 10 0.00035 39.4 2.2 30 307-342 45-74 (608)
194 3cf4_A Acetyl-COA decarboxylas 42.4 3.8 0.00013 44.2 -1.1 19 353-371 413-431 (807)
195 3oc4_A Oxidoreductase, pyridin 42.3 7.6 0.00026 38.2 1.2 39 159-197 269-312 (452)
196 3nrn_A Uncharacterized protein 42.0 15 0.0005 35.4 3.1 30 162-196 372-403 (421)
197 2vdc_G Glutamate synthase [NAD 41.2 21 0.00073 35.3 4.3 38 159-201 407-444 (456)
198 2gmh_A Electron transfer flavo 41.2 5.9 0.0002 40.8 0.2 27 349-375 503-536 (584)
199 2iid_A L-amino-acid oxidase; f 41.0 23 0.00078 34.9 4.5 38 161-202 449-486 (498)
200 2cul_A Glucose-inhibited divis 40.7 15 0.0005 32.5 2.7 29 6-34 98-127 (232)
201 1rsg_A FMS1 protein; FAD bindi 40.7 18 0.00061 36.1 3.7 39 161-202 471-509 (516)
202 2hr7_A Insulin receptor; hormo 40.1 6.1 0.00021 40.0 0.0 24 317-340 225-248 (486)
203 1n8y_C Protooncoprotein; tyros 39.6 13 0.00043 38.8 2.3 55 314-371 228-298 (608)
204 1rp0_A ARA6, thiazole biosynth 39.3 26 0.0009 31.9 4.3 42 161-202 233-276 (284)
205 3hyw_A Sulfide-quinone reducta 39.2 24 0.00083 34.3 4.3 44 159-202 284-334 (430)
206 3l8k_A Dihydrolipoyl dehydroge 38.6 25 0.00087 34.5 4.4 36 159-199 298-333 (466)
207 3iwa_A FAD-dependent pyridine 38.3 18 0.00061 35.6 3.2 39 159-197 284-327 (472)
208 2dtg_E Insulin receptor; IR ec 38.0 3.3 0.00011 44.9 -2.5 24 317-340 225-248 (897)
209 1nhp_A NADH peroxidase; oxidor 37.9 15 0.00051 35.9 2.5 38 160-197 272-314 (447)
210 1m6i_A Programmed cell death p 37.4 18 0.00061 36.1 3.0 37 161-197 310-350 (493)
211 2gqf_A Hypothetical protein HI 35.8 19 0.00066 34.9 2.9 21 12-32 148-168 (401)
212 2i0z_A NAD(FAD)-utilizing dehy 35.7 28 0.00096 34.0 4.1 27 6-32 164-191 (447)
213 1c0p_A D-amino acid oxidase; a 32.4 52 0.0018 30.6 5.3 25 176-200 334-358 (363)
214 3dje_A Fructosyl amine: oxygen 31.9 21 0.00073 34.4 2.5 28 6-33 194-222 (438)
215 1qo8_A Flavocytochrome C3 fuma 31.6 43 0.0015 33.8 4.9 35 7-42 282-321 (566)
216 4g6h_A Rotenone-insensitive NA 30.0 33 0.0011 34.4 3.6 38 160-200 363-400 (502)
217 2gag_A Heterotetrameric sarcos 30.0 37 0.0013 37.1 4.2 36 160-201 409-444 (965)
218 2qae_A Lipoamide, dihydrolipoy 29.7 43 0.0015 32.8 4.3 36 159-198 304-339 (468)
219 2bry_A NEDD9 interacting prote 29.7 14 0.00049 37.0 0.8 20 17-36 215-234 (497)
220 2z3y_A Lysine-specific histone 29.4 33 0.0011 35.6 3.6 38 162-202 623-660 (662)
221 1chu_A Protein (L-aspartate ox 29.3 36 0.0012 34.4 3.7 42 159-200 365-410 (540)
222 3o0h_A Glutathione reductase; 29.2 44 0.0015 32.9 4.3 36 158-198 315-350 (484)
223 4dna_A Probable glutathione re 28.3 47 0.0016 32.5 4.3 35 159-198 296-330 (463)
224 1qo8_A Flavocytochrome C3 fuma 28.2 39 0.0013 34.2 3.8 41 160-200 520-563 (566)
225 3ic9_A Dihydrolipoamide dehydr 28.0 49 0.0017 32.8 4.4 35 159-198 303-337 (492)
226 1yy9_A Epidermal growth factor 28.0 32 0.0011 35.8 3.2 25 314-338 221-245 (624)
227 2a8x_A Dihydrolipoyl dehydroge 28.0 48 0.0017 32.3 4.4 35 159-198 299-333 (464)
228 1xhc_A NADH oxidase /nitrite r 27.7 47 0.0016 31.5 4.1 38 159-197 258-295 (367)
229 1vdc_A NTR, NADPH dependent th 27.0 23 0.00078 32.5 1.6 20 15-34 107-126 (333)
230 3ces_A MNMG, tRNA uridine 5-ca 27.0 43 0.0015 35.1 3.9 29 5-33 153-182 (651)
231 3i2t_A Epidermal growth factor 26.5 21 0.00073 36.6 1.4 26 314-339 223-248 (551)
232 3urh_A Dihydrolipoyl dehydroge 26.3 51 0.0018 32.5 4.2 35 159-198 328-362 (491)
233 4gut_A Lysine-specific histone 26.1 52 0.0018 35.1 4.4 36 160-198 740-775 (776)
234 1dxl_A Dihydrolipoamide dehydr 26.1 57 0.0019 31.8 4.5 34 160-198 308-341 (470)
235 2uzz_A N-methyl-L-tryptophan o 25.8 24 0.00081 33.0 1.6 22 177-198 335-356 (372)
236 1y0p_A Fumarate reductase flav 25.7 37 0.0013 34.4 3.1 40 160-199 525-567 (571)
237 1fec_A Trypanothione reductase 25.1 58 0.002 32.2 4.3 35 159-198 316-350 (490)
238 1v59_A Dihydrolipoamide dehydr 24.6 62 0.0021 31.7 4.4 35 159-198 315-349 (478)
239 2hqm_A GR, grase, glutathione 24.0 63 0.0022 31.8 4.4 35 159-198 312-346 (479)
240 4a9w_A Monooxygenase; baeyer-v 23.8 26 0.00087 32.2 1.3 21 12-32 112-132 (357)
241 3lad_A Dihydrolipoamide dehydr 23.7 66 0.0023 31.4 4.4 35 159-198 308-342 (476)
242 1ojt_A Surface protein; redox- 23.7 62 0.0021 31.8 4.2 35 159-198 314-348 (482)
243 1ges_A Glutathione reductase; 23.7 63 0.0022 31.5 4.3 35 159-198 293-327 (450)
244 2bs2_A Quinol-fumarate reducta 23.5 50 0.0017 34.4 3.6 44 158-201 382-429 (660)
245 2wpf_A Trypanothione reductase 23.4 65 0.0022 31.9 4.3 35 159-198 320-354 (495)
246 1kf6_A Fumarate reductase flav 23.4 56 0.0019 33.6 3.9 43 158-200 369-415 (602)
247 3k30_A Histamine dehydrogenase 23.1 33 0.0011 35.8 2.2 36 161-202 641-676 (690)
248 4fk1_A Putative thioredoxin re 23.1 47 0.0016 30.2 3.0 26 7-32 92-117 (304)
249 2eq6_A Pyruvate dehydrogenase 22.9 65 0.0022 31.5 4.2 35 159-198 299-333 (464)
250 1zk7_A HGII, reductase, mercur 22.8 71 0.0024 31.2 4.4 35 159-198 299-333 (467)
251 1ebd_A E3BD, dihydrolipoamide 22.7 68 0.0023 31.2 4.3 33 160-197 299-331 (455)
252 1zmd_A Dihydrolipoyl dehydroge 22.5 68 0.0023 31.3 4.3 35 159-198 310-344 (474)
253 2zxi_A TRNA uridine 5-carboxym 22.3 52 0.0018 34.3 3.4 36 161-202 389-424 (637)
254 1w4x_A Phenylacetone monooxyge 21.9 63 0.0022 32.4 3.9 20 13-32 135-154 (542)
255 2r9z_A Glutathione amide reduc 21.9 73 0.0025 31.2 4.3 35 159-198 292-326 (463)
256 3dgh_A TRXR-1, thioredoxin red 21.9 82 0.0028 30.9 4.7 36 158-198 315-351 (483)
257 1d4d_A Flavocytochrome C fumar 21.7 49 0.0017 33.6 3.1 41 160-200 526-569 (572)
258 3dk9_A Grase, GR, glutathione 21.6 75 0.0026 31.1 4.4 36 158-198 320-355 (478)
259 3dgz_A Thioredoxin reductase 2 20.6 83 0.0028 30.9 4.5 37 158-198 315-351 (488)
260 1mo9_A ORF3; nucleotide bindin 20.4 76 0.0026 31.6 4.1 34 159-197 343-376 (523)
261 2q0l_A TRXR, thioredoxin reduc 20.4 26 0.00088 31.8 0.6 21 13-33 95-115 (311)
262 1xdi_A RV3303C-LPDA; reductase 20.2 77 0.0026 31.3 4.1 35 159-198 307-341 (499)
263 2e5v_A L-aspartate oxidase; ar 20.1 29 0.00099 34.4 0.9 41 158-198 326-370 (472)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=3.7e-83 Score=673.86 Aligned_cols=385 Identities=58% Similarity=1.075 Sum_probs=352.5
Q ss_pred CCCCCCeeeeeeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCC
Q 016489 2 GIAKDGSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGW 81 (388)
Q Consensus 2 g~~~dG~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~ 81 (388)
|+++||+++.+|++|.+++||+||+|||++|.+.++|++++|++ ....++.++++++++|.++.+.+.++.+.|++||
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~--~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~ 264 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLR--ANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGW 264 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTT--TTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEET
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCC--CCCCchhHHhhhhhheecCcccccCCeEEEEEec
Confidence 45678888888888999999999999999999999999999997 3456778999999999888777778888999999
Q ss_pred CCCCCCcceeEEEEcC--CCEEEEEEEEecCCCCCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCcc
Q 016489 82 PLDQKTYGGSFLYHMN--DRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYP 159 (388)
Q Consensus 82 p~~~~~~Gggwiy~~~--~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~ 159 (388)
|+....+|++|+|+.. +++++||+++..++.++..++++.|++|++||.++++|++++++.|+++.++.++++.++++
T Consensus 265 ~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 344 (584)
T 2gmh_A 265 PLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKL 344 (584)
T ss_dssp TSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCC
T ss_pred cccCCcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCcc
Confidence 8765567889999998 78999999999887777778899999999999999999999999999999999888888999
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc-----Cch---HHHHHHHHHHhhhHHHHHHHHhhhHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE-----DSN---MEIYWDTLQKSWVWQELQRARNYRPA 231 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~-----~~~---l~~Y~~~~~~s~~~~el~~~r~~~~~ 231 (388)
+.+|++||||||++++|++++|+++||.+|+++|+++.++++. ..+ |+.|+++++++|+++||+.+|+++++
T Consensus 345 ~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~ 424 (584)
T 2gmh_A 345 TFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPS 424 (584)
T ss_dssp EETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGG
T ss_pred ccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHHHHhChhHH
Confidence 9999999999999999999999999999999999999998853 232 89999999999999999999999998
Q ss_pred Hh-h-CChHHHHHHHHHHHHhcCCCCccccCCCCCcccchhhhcCCCCCCCCCCCCCCCCcccceEeecccccCCCCCCe
Q 016489 232 FE-Y-GLLPGLAICGLEHYILRGKSPYTLKHGKPDHEATDAARLHSPIEYPKPDGVLSFDVPTSLHRSNTNHEHDQPAHL 309 (388)
Q Consensus 232 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~dg~ltfd~~~~v~~s~~~h~~d~~~Hl 309 (388)
|+ + |.||+|++.++++|+++|+.|||++|.++|+.++++++.++||+||||||+||||++|||++|||||+||||+||
T Consensus 425 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl 504 (584)
T 2gmh_A 425 CHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHL 504 (584)
T ss_dssp GGSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSE
T ss_pred HHHhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeE
Confidence 86 3 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcccCCCCCCCccccccCCceEEEecCCCCc-eeEEEecCCCccCCcccccCCCCCeeEECcCCCCCCcccCC
Q 016489 310 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQ-LKLQINAQNCLHCKACDIKDPKQNIKWTVPEGGGGPGYSVM 388 (388)
Q Consensus 310 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~-~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p~gg~G~~y~~~ 388 (388)
+|+|+++|...|++.|+++|+++|||+||++++++++. .+++||+++|+|||||+++||++||+|++|+||+||+|++|
T Consensus 505 ~~~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg~g~~~~~~ 584 (584)
T 2gmh_A 505 TLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 (584)
T ss_dssp EESSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCSTTCBCCCSCC
T ss_pred EEcCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCCCchhhCCCCCceeECCCCCCCcCccCC
Confidence 99999999877788889999999999999994422232 27999999999999999999999999999999999999998
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.88 E-value=7.2e-22 Score=193.54 Aligned_cols=199 Identities=16% Similarity=0.239 Sum_probs=144.3
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeEEEEc
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHM 96 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy~~ 96 (388)
.+++|++||+|||++|.+++++ |+.. .....+.+...+. +.......+++....+++... ..|+.|+++.
T Consensus 147 ~~~~a~~vIgAdG~~S~vr~~~----g~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~ 216 (397)
T 3oz2_A 147 VDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISALQ--YRMINVDVDPDYTDFYLGSIA---PAGYIWVFPK 216 (397)
T ss_dssp EEEEEEEEEECCCTTCHHHHHH----TCGG-GCCCGGGEEEEEE--EEEESCCCCTTEEEEECSTTS---TTEEEEEEEE
T ss_pred eEEEEeEEEeCCccccHHHHHc----CCCc-ccccceeeeeeEE--EEeeccccCcccceeeeeccC---CCceEEEeec
Confidence 4699999999999999999865 7763 1223333333322 222233334566666666432 3478899999
Q ss_pred CCCEEEEEEEEecCCCCCCCChHHHHHHHH-cCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEEccCccccC
Q 016489 97 NDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFLN 175 (388)
Q Consensus 97 ~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k-~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLvGDAAG~vd 175 (388)
+++.++||++...+......++.+.++++. .+|. +..++.++.-...+|..... .+.+.+|++||||||++++
T Consensus 217 ~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~--~~~~~~~v~lvGDAA~~~~ 290 (397)
T 3oz2_A 217 GEGMANVGIGSSINWIHNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSKVK--MPITMPGLMLVGDAARLID 290 (397)
T ss_dssp ETTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCCCC--SCCEETTEEECGGGGTCSC
T ss_pred ccceeEEEEeeccchhhhhhhHHHHHHHHHHhCcc----ccccceeeeeeccccccCcc--cceeeeeEEEcccccccCC
Confidence 999999999988765444445666777764 4443 44566666656667765543 3678999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhhhHHHHHHHHhhhHHH
Q 016489 176 VPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 232 (388)
Q Consensus 176 p~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~ 232 (388)
|++++||++||.+|++||++|.++++. ++.|+.|++.++++| .++......+++.+
T Consensus 291 P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~-~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 291 PITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERF-ERKHLRNWVAKEKL 350 (397)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999999999999975 356899999999987 66666555555554
No 3
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.81 E-value=1.8e-18 Score=170.52 Aligned_cols=203 Identities=15% Similarity=0.196 Sum_probs=147.9
Q ss_pred cCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeEEE
Q 016489 15 RGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLY 94 (388)
Q Consensus 15 ~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy 94 (388)
++.+++|++||+|+|.+|.+.+++ |+.. ....+..+..++.. .++....+++....+++. . ...|+.|++
T Consensus 145 ~~~~~~a~~vV~A~G~~s~~~~~~----g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~--~~~g~~~~~ 214 (397)
T 3cgv_A 145 EIVDVRAKMVIAADGFESEFGRWA----GLKS-VILARNDIISALQY--RMINVDVDPDYTDFYLGS-I--APAGYIWVF 214 (397)
T ss_dssp EEEEEEEEEEEECCCTTCHHHHHH----TCCT-TCCCGGGEEEEEEE--EEESCCCCTTEEEEECST-T--STTEEEEEE
T ss_pred eEEEEEcCEEEECCCcchHhHHhc----CCCc-cCCChhheeEEEEE--EeccCCCCCCcEEEEeCC-c--CCCceEEEE
Confidence 456899999999999999888864 7762 02335556666542 233333345555555553 1 134778999
Q ss_pred EcCCCEEEEEEEEecCCCCCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEEccCcccc
Q 016489 95 HMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCAAGFL 174 (388)
Q Consensus 95 ~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLvGDAAG~v 174 (388)
|..+++++||++...+......++.+.++++...- +.+..+++++.....+|..+. .++...+|+++|||||+++
T Consensus 215 P~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~liGDAa~~~ 289 (397)
T 3cgv_A 215 PKGEGMANVGIGSSINWIHNRFELKNYLDRFIENH---PGLKKGQDIQLVTGGVSVSKV--KMPITMPGLMLVGDAARLI 289 (397)
T ss_dssp EEETTEEEEEEEEETTTCSCHHHHHHHHHHHHHTC---HHHHTSEEEEEEEEEEECCCC--CSCCEETTEEECGGGGTCS
T ss_pred ECCCCeEEEEEEeccccccCCCCHHHHHHHHHHhC---cCCCCCeEEeeeeeeeecCCC--ccceeeCCEEEEEccccCC
Confidence 99888999999887653322234566777765331 123456666666677887544 4578899999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhhhHHHHHHHHhhhHHHh
Q 016489 175 NVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 233 (388)
Q Consensus 175 dp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~~ 233 (388)
+|++++|+++||.+|..+|+.+.+++.. ...|+.|++.+++. +.++++..+.++.++.
T Consensus 290 ~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~~ 351 (397)
T 3cgv_A 290 DPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKER-FERKHLRNWVAKEKLA 351 (397)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998854 25689999999887 4888999888887663
No 4
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.77 E-value=3.1e-17 Score=166.44 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=142.1
Q ss_pred cCe--EEEecEEEecccCCCccchhHHHhcCCCcc--cCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcce
Q 016489 15 RGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGG 90 (388)
Q Consensus 15 ~g~--~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~--~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gg 90 (388)
+|. +++|++||+|||.+|.+.+++ +...+ ....+..+..+++..+.++....+++....+++.+.. ..|+
T Consensus 143 ~G~~~~~~ad~VV~AdG~~s~vr~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~ 216 (453)
T 3atr_A 143 TNEELTVYSKVVVEATGYSRSFRSKL----PPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETS--PGGY 216 (453)
T ss_dssp TTEEEEEECSEEEECCGGGCTTGGGS----CTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTS--TTSC
T ss_pred CCceEEEEcCEEEECcCCchhhHHhc----CCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCC--CCcE
Confidence 565 799999999999999998854 65410 0112335667777666655433344554455554321 2467
Q ss_pred eEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEEccC
Q 016489 91 SFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIGCA 170 (388)
Q Consensus 91 gwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLvGDA 170 (388)
.|+||..+++++||+++..+.. ..++.+.++++... +.+.+.+.++++.....+|..+ .+++.+.+|++|||||
T Consensus 217 ~~~~P~~~~~~~vg~~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~lvGDA 290 (453)
T 3atr_A 217 WWYFPKGKNKVNVGLGIQGGMG--YPSIHEYYKKYLDK--YAPDVDKSKLLVKGGALVPTRR--PLYTMAWNGIIVIGDS 290 (453)
T ss_dssp EEEEEEETTEEEEEEEEESSSC--CCCHHHHHHHHHHH--HCTTEEEEEEEEEEEEEEECSS--CCSCSEETTEEECGGG
T ss_pred EEEEECCCCeEEEEEEecCCCC--CCCHHHHHHHHHHh--hhhhcCCCeEEeccceeccCCC--CCCceecCCEEEEeCc
Confidence 8999998889999998875421 22355555555311 1123333455554445566632 3567889999999999
Q ss_pred ccccCCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhhhHHHHHHHHhhhHHH
Q 016489 171 AGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAF 232 (388)
Q Consensus 171 AG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~ 232 (388)
|++++|++|+|+..||.+|..+|+++.+++.. ...|+.|++.++..+ .+.++..+.++.++
T Consensus 291 Ah~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~-~~~~~~~~~~~~~~ 355 (453)
T 3atr_A 291 GFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEY-GAKQASLDIFRRFL 355 (453)
T ss_dssp GTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHT-HHHHHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999999999999999999999988753 457899999999874 77778777777655
No 5
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.71 E-value=7e-17 Score=160.90 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=126.4
Q ss_pred ecCe--EEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEe-cCCCCCCCCcEEEEcCCCCCCCCcce
Q 016489 14 QRGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWE-IDEGKHNPGEILHTLGWPLDQKTYGG 90 (388)
Q Consensus 14 ~~g~--~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~-~~~~~~~~g~v~~~~G~p~~~~~~Gg 90 (388)
.+|. +++|++||+|+|.+|.+.+. +|+.. +...+...++.. .+.. .+....+.+....++. + ....|+
T Consensus 146 ~~g~~~~~~a~~vV~A~G~~s~l~~~----~g~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~ 216 (421)
T 3nix_A 146 INGNKREIEARFIIDASGYGRVIPRM----FGLDK-PSGFESRRTLFT-HIKDVKRPVAAEMEGNRITAV-V--HKPKVW 216 (421)
T ss_dssp TTSCEEEEEEEEEEECCGGGCHHHHH----TTCEE-CCSSCCCEEEEE-EEECTTCCC----CCSEEEEE-E--EETTEE
T ss_pred CCCCEEEEEcCEEEECCCCchhhHHh----cCCCC-CCcCCCcEEEEE-EECCCcCCCccCCCCeEEEEE-e--CCCCEE
Confidence 4565 69999999999999988764 47763 122233333321 1111 1111111122222221 1 012466
Q ss_pred eEEEEcCCCEEEEEEEEecCCCCC-CCChHHHHHHHH-cCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEEc
Q 016489 91 SFLYHMNDRQIALGLVVALNYHNP-FLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 168 (388)
Q Consensus 91 gwiy~~~~~~vsVGlv~~l~~~~~-~~~~~~~~~~~k-~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLvG 168 (388)
.|++|..+++++||++...+.... ..++.+.++.+. .+|.+.+.+++.+.. ...+.++..... .++.+.+|++|||
T Consensus 217 ~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~-~~~~~~~~v~lvG 294 (421)
T 3nix_A 217 IWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFL-FEPRTIEGYAIS-ASKLYGDGFVLTG 294 (421)
T ss_dssp EEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBS-SCCEEEECCCBE-ESCSEETTEEECG
T ss_pred EEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccc-cCceeeccccee-eeeeccCCEEEec
Confidence 788899999999999887653222 236788887775 678888888776554 123334332222 4577899999999
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHHHHhhccC--chHHHHHHHHHHh
Q 016489 169 CAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHED--SNMEIYWDTLQKS 216 (388)
Q Consensus 169 DAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~--~~l~~Y~~~~~~s 216 (388)
|||++++|++++|++.||.+|.++|+++.+++.+. ..++.|.+.++..
T Consensus 295 DAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~~ 344 (421)
T 3nix_A 295 NATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQG 344 (421)
T ss_dssp GGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHH
T ss_pred ccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763 4567788777664
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.64 E-value=5e-15 Score=152.68 Aligned_cols=188 Identities=19% Similarity=0.161 Sum_probs=126.9
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCC--CCCcEEEEcCCCCCCCCcceeEEE
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKH--NPGEILHTLGWPLDQKTYGGSFLY 94 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~--~~g~v~~~~G~p~~~~~~Gggwiy 94 (388)
.+++|++||+|+|.+|.+.+++ |++. .... ....++..++....... ..+...+.+. ..|+.|++
T Consensus 157 ~~i~ad~VI~AdG~~S~vr~~l----g~~~--~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~G~~~~~ 223 (512)
T 3e1t_A 157 LMAHARFIVDASGNRTRVSQAV----GERV--YSRF-FQNVALYGYFENGKRLPAPRQGNILSAAF------QDGWFWYI 223 (512)
T ss_dssp EEEEEEEEEECCCTTCSSGGGT----CCEE--ECST-TCEEEEEEEEESCCCCSTTCTTSEEEEEE------TTEEEEEE
T ss_pred EEEEcCEEEECCCcchHHHHHc----CCCc--cCch-hcceEEEEEecCCccCCCCCcCceEEEEe------CCceEEEE
Confidence 3899999999999999998864 6652 1111 11333444443221111 1233333321 13677888
Q ss_pred EcCCCEEEEEEEEecCCCCC-CCChHHHHHHHH-cCCCcccccCCCeeeee-cceeecc-CCCc-CCCccccCCEEEEcc
Q 016489 95 HMNDRQIALGLVVALNYHNP-FLNPYEEFQKFK-HHPAIKPLLEGGTVVQY-GARTLNE-GGLQ-SIPYPVFPGGAIIGC 169 (388)
Q Consensus 95 ~~~~~~vsVGlv~~l~~~~~-~~~~~~~~~~~k-~~P~i~~~l~~~~~~~y-ga~~ip~-gg~~-~~p~~~~~g~lLvGD 169 (388)
|+.+++++||++...+.... ..++.+.++.+. .+|.+.+++...+.+.. ....++. ..+. ..++...+|++||||
T Consensus 224 Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGD 303 (512)
T 3e1t_A 224 PLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGD 303 (512)
T ss_dssp ECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGG
T ss_pred EeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEec
Confidence 99888999999987653322 235777777764 67888887777655421 1111211 1111 235778999999999
Q ss_pred CccccCCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhh
Q 016489 170 AAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSW 217 (388)
Q Consensus 170 AAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~ 217 (388)
||++++|++++|++.||.++.++|+++.+++.+ ...|+.|++.+++.|
T Consensus 304 AAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~ 355 (512)
T 3e1t_A 304 AACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREY 355 (512)
T ss_dssp GTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988865 245899999988864
No 7
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.58 E-value=4.4e-14 Score=140.61 Aligned_cols=207 Identities=14% Similarity=0.065 Sum_probs=128.4
Q ss_pred CeeeeeeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEE-EEEEEEecCCCCCCCCcEEEEcCCCCCC
Q 016489 7 GSKKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGKHNPGEILHTLGWPLDQ 85 (388)
Q Consensus 7 G~~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~l-gvke~~~~~~~~~~~g~v~~~~G~p~~~ 85 (388)
+.+...+++|.+++|++||+|||.+|.+.+++ ++... .+..... .+.....++...........+++
T Consensus 156 ~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 223 (407)
T 3rp8_A 156 DGVTVWFTDGSSASGDLLIAADGSHSALRPWV---LGFTP----QRRYAGYVNWNGLVEIDEALAPGDQWTTFVG----- 223 (407)
T ss_dssp TEEEEEETTSCEEEESEEEECCCTTCSSHHHH---HSSCC----CCEEEEEEEEEEEEECCTTTCCTTEEEEEEE-----
T ss_pred CcEEEEEcCCCEEeeCEEEECCCcChHHHHHh---cCCCC----CCcccCcEEEEEEEecccccCCCCceEEEEC-----
Confidence 34444567888999999999999999998875 35531 1212111 22333344433222233333333
Q ss_pred CCcceeEEEEcCCCEEEEEEEEecCCCCCCCCh----HHHHHHHHc-CCCcccccCCCe---eeeecceeeccCCCcCCC
Q 016489 86 KTYGGSFLYHMNDRQIALGLVVALNYHNPFLNP----YEEFQKFKH-HPAIKPLLEGGT---VVQYGARTLNEGGLQSIP 157 (388)
Q Consensus 86 ~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~----~~~~~~~k~-~P~i~~~l~~~~---~~~yga~~ip~gg~~~~p 157 (388)
..|+.|+||..++.+.+.+.+..+... ..++ .++.+.+.. +|.+.++++... .... ...+... .+
T Consensus 224 -~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~ 296 (407)
T 3rp8_A 224 -EGKQVSLMPVSAGRFYFFFDVPLPAGL-AEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRI--EIHDIEP---FS 296 (407)
T ss_dssp -TTEEEEEEEETTTEEEEEEEEECCTTC-SCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEE--EEEECCC---CS
T ss_pred -CCcEEEEEEcCCCeEEEEEEeCCCcCC-CCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEE--eeEecCC---CC
Confidence 236678999999888888877643211 1122 222233332 233333332211 1111 1222211 25
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhHHHHHHHHhhhHHHh
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAFE 233 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~~ 233 (388)
+.+.++++||||||++++|++++|+..||.++..+|+++.++-.....|+.|++..+.. ..+-+..++.+..+++
T Consensus 297 ~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~~ 371 (407)
T 3rp8_A 297 RLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDR-VRDLVLKARKRCDITH 371 (407)
T ss_dssp CCEETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred ceecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhh
Confidence 77899999999999999999999999999999999999976431145689999988875 3666667777777664
No 8
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.52 E-value=1.3e-13 Score=144.96 Aligned_cols=196 Identities=17% Similarity=0.153 Sum_probs=128.6
Q ss_pred Ceeeee-ee-cC--eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCC--CCCCCcEEEEcC
Q 016489 7 GSKKEN-FQ-RG--VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG--KHNPGEILHTLG 80 (388)
Q Consensus 7 G~~~~~-~~-~g--~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~--~~~~g~v~~~~G 80 (388)
|..+.+ ++ +| .+++|++||+|+|.+|.+.+++ ++.. .......+++...+..... ....+.....+.
T Consensus 159 g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~l----g~~~---~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~ 231 (591)
T 3i3l_A 159 PDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKL----GVRQ---YDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITF 231 (591)
T ss_dssp TTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHH----TCEE---EEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEE
T ss_pred CCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHc----CCCC---CCccccceEEEEEEecCccccCCCCCceEEEEc
Confidence 444444 33 55 5899999999999999988864 7652 1111112233322332111 111233333221
Q ss_pred CCCCCCCcceeEEEEcCCCEEEEEEEEecCCCC--CCCChHHHHHHHH-cCCCcccccCCCeeeeecceeeccCCCcCCC
Q 016489 81 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHN--PFLNPYEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIP 157 (388)
Q Consensus 81 ~p~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~~--~~~~~~~~~~~~k-~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p 157 (388)
..|+.|++|..++.++|+++...+... ...++.++++.+. .+|.+.+.+.+++.+.. .+.++...+. .+
T Consensus 232 ------~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~-~~ 303 (591)
T 3i3l_A 232 ------EDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDE-VRIVQDWSYD-TE 303 (591)
T ss_dssp ------TTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSC-CEEEEEEEEE-ES
T ss_pred ------CCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccC-ceEecccccc-hh
Confidence 246778889888899999988764221 1134566666664 55766677776665432 2334333232 35
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhh
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSW 217 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~ 217 (388)
+...+|++||||||++++|++++|++.||.+|.++|+++.+++.. ...++.|++.++..|
T Consensus 304 ~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~ 367 (591)
T 3i3l_A 304 VFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAY 367 (591)
T ss_dssp CSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred hcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 778999999999999999999999999999999999999988865 235788998888764
No 9
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.39 E-value=6.3e-12 Score=124.12 Aligned_cols=200 Identities=12% Similarity=0.064 Sum_probs=114.7
Q ss_pred ecCe--EEEecEEEecccCCCccchhHHHhcCCCcccCC-CCceEEEEEEEEE-ecCCCCCCCCcEEEEcCCCCCCCCcc
Q 016489 14 QRGV--ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHA-QHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQKTYG 89 (388)
Q Consensus 14 ~~g~--~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~-~~~~~~lgvke~~-~~~~~~~~~g~v~~~~G~p~~~~~~G 89 (388)
++|. +++|++||+|||.+|.+.+++ +... .. ....+..+...+. ..+++ .+.. .+..+ ..|
T Consensus 143 ~~g~~~~~~a~~vV~AdG~~S~vr~~l----~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~------~~g 207 (394)
T 1k0i_A 143 RDGERLRLDCDYIAGCDGFHGISRQSI----PAER--LKVFERVYPFGWLGLLADTPPV--SHEL-IYANH------PRG 207 (394)
T ss_dssp ETTEEEEEECSEEEECCCTTCSTGGGS----CGGG--CEEEEEEEEEEEEEEEESSCCS--CSSC-EEECC------TTC
T ss_pred cCCcEEEEEeCEEEECCCCCcHHHHhc----Cccc--cccccccccceeEEEecCCCCC--ccce-EEEEc------CCc
Confidence 6776 799999999999999998754 4431 10 0112222222221 11211 1221 22111 124
Q ss_pred eeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHHcC-CC-cccccCCCeeeeecceeeccCCCcCCCccccCCEEEE
Q 016489 90 GSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHH-PA-IKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 167 (388)
Q Consensus 90 ggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~-P~-i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLv 167 (388)
+.|+++..++..++.+.+.........++.+.++.+.+. +. +...+..+..... ...|...+. .++...++++||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~grv~Lv 284 (394)
T 1k0i_A 208 FALCSQRSATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSFV-VEPMQHGRLFLA 284 (394)
T ss_dssp CEEEEEEETTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEEE-EECSEETTEEEC
T ss_pred eEEEEecCCCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhhh-ccccccCCEEEE
Confidence 456666666678877765432111123445555555422 11 1112222222221 222322222 235678999999
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc--CchHHHHHHHHHHhhhHHHHHHHHhhhHHH
Q 016489 168 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTLQKSWVWQELQRARNYRPAF 232 (388)
Q Consensus 168 GDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~--~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~ 232 (388)
||||..++|+.++|++.||.++..+|+.+.+++.. ...|+.|++..+.. +.+-.+.++.+..++
T Consensus 285 GDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~-~~~~~~~s~~~~~~~ 350 (394)
T 1k0i_A 285 GDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRR-IWKAERFSWWMTSVL 350 (394)
T ss_dssp GGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred echhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999887743 46789999888764 344444444444433
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.36 E-value=3.5e-12 Score=126.35 Aligned_cols=204 Identities=11% Similarity=0.007 Sum_probs=121.5
Q ss_pred eeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCC--CCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcc
Q 016489 12 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHA--QHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYG 89 (388)
Q Consensus 12 ~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~--~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~G 89 (388)
.+++|.+++|++||+|||.+|.+.++ +|... ... .......++...+..+ . +... ++++ |. .|
T Consensus 146 ~~~~g~~~~ad~vV~AdG~~s~vr~~----lg~~~-~~~~p~~~~~~~~~~~~~~~~--~--~~~~-~~~~-~~----~~ 210 (399)
T 2x3n_A 146 RLNDGRVLRPRVVVGADGIASYVRRR----LLDID-VERRPYPSPMLVGTFALAPCV--A--ERNR-LYVD-SQ----GG 210 (399)
T ss_dssp EETTSCEEEEEEEEECCCTTCHHHHH----TSCCC-CCCCCCSSCEEEEEEECCHHH--H--HCEE-EEEC-TT----SC
T ss_pred EECCCCEEECCEEEECCCCChHHHHH----hCCCc-cccCCCCCCceEEEEEEecCC--C--CCcc-EEEc-CC----Cc
Confidence 35677789999999999999998775 46652 111 1112002333222221 0 1112 3332 10 36
Q ss_pred eeEEEEcCCCEEEEEEEEecCC-CC--CCCChHHHHHHHHcC-CCcc-cccCCCeeeeecceeeccCCCcCCCccccCCE
Q 016489 90 GSFLYHMNDRQIALGLVVALNY-HN--PFLNPYEEFQKFKHH-PAIK-PLLEGGTVVQYGARTLNEGGLQSIPYPVFPGG 164 (388)
Q Consensus 90 ggwiy~~~~~~vsVGlv~~l~~-~~--~~~~~~~~~~~~k~~-P~i~-~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~ 164 (388)
+.|+||.+++.+.+.+....+. .. ...++.++.+.++.. |.+. ..++.... + .....|.......++...+++
T Consensus 211 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~rv 288 (399)
T 2x3n_A 211 LAYFYPIGFDRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTG-T-SRFKGIPIGYLNLDRYWADNV 288 (399)
T ss_dssp EEEEEEETTTEEEEEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHHHHTCCC-S-TTCEECCCCCEECSCSEETTE
T ss_pred EEEEEEcCCCEEEEEEEeCccccccccccCCHHHHHHHHhhcCCcchhhHHhcCCc-c-ceEEechhhcccccccccCcE
Confidence 6788898776665554332211 00 013345555566533 3331 22221110 0 011223322122456788999
Q ss_pred EEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhhhHHHHHHHHhhhHHHh
Q 016489 165 AIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 233 (388)
Q Consensus 165 lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~~ 233 (388)
+||||||++++|++++|++.||.++..+|+.+.++++. ...|+.|++..+.. ..+-++.++.+..+|.
T Consensus 289 ~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~~ 360 (399)
T 2x3n_A 289 AMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPV-NQAIVSYGHALATSLE 360 (399)
T ss_dssp EECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHTT
T ss_pred EEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccH-HHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999988752 35689999988875 3555666777766654
No 11
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.31 E-value=5.7e-12 Score=124.18 Aligned_cols=185 Identities=12% Similarity=0.096 Sum_probs=105.6
Q ss_pred eeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEE-EEEEEEEecCC---CCCCCCcEEE---EcCCCCC
Q 016489 12 NFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-LGIKEVWEIDE---GKHNPGEILH---TLGWPLD 84 (388)
Q Consensus 12 ~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~-lgvke~~~~~~---~~~~~g~v~~---~~G~p~~ 84 (388)
.+++|.+++|++||+|||.+|.+.+++ +... .+.... ..+......+. ....++...+ +++
T Consensus 140 ~~~~g~~~~ad~vV~AdG~~s~vr~~l----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 207 (379)
T 3alj_A 140 TLQTGEVLEADLIVGADGVGSKVRDSI----GFKQ----DRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP---- 207 (379)
T ss_dssp EETTSCEEECSEEEECCCTTCHHHHHH----CCCE----EEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSS----
T ss_pred EECCCCEEEcCEEEECCCccHHHHHHh----cCCC----CcCcCCcEEEEEEechhhccCCcCCcccccccceEEC----
Confidence 356777899999999999999998765 5431 111111 12222222210 1111232333 232
Q ss_pred CCCcceeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHH-cCCCcccccCCC---eeeeecceeeccCCCcCCCccc
Q 016489 85 QKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK-HHPAIKPLLEGG---TVVQYGARTLNEGGLQSIPYPV 160 (388)
Q Consensus 85 ~~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k-~~P~i~~~l~~~---~~~~yga~~ip~gg~~~~p~~~ 160 (388)
..|+.|+||.+++.+++++....+...+ ....+.|..+. ..|.+.++++.. +...+.... ...+++..
T Consensus 208 --~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~ 279 (379)
T 3alj_A 208 --RVQRILYSPCNENELYLGLMAPAADPRG-SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYE-----TTKLDSWT 279 (379)
T ss_dssp --SCCEEEEEECSSSEEEEEEEECTTCTTT-TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEE-----EEEESCSE
T ss_pred --CCCEEEEEECCCCcEEEEEEecCCCCCH-HHHHHHHhcCCchhccHHHHHhhCCccceEEecccc-----cCCCCCcc
Confidence 2366789999988888877664321111 11122233321 122122333211 111111100 01134667
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 216 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s 216 (388)
.++++||||||++++|++|+|++.||.++..+|+.+.+.-.....|+.|++..+..
T Consensus 280 ~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~l~~Y~~~r~~~ 335 (379)
T 3alj_A 280 RGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEGSSVEDALVAWETRIRPI 335 (379)
T ss_dssp ETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999998754210134688898877664
No 12
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.29 E-value=3.2e-11 Score=123.73 Aligned_cols=183 Identities=14% Similarity=0.095 Sum_probs=108.7
Q ss_pred CCCeeeee-eecCeEEEecEEEecccCCCccchhHHHhcCCCccc--CCCCceEEEEEEEEEecCCC-CCCCCcEEEEcC
Q 016489 5 KDGSKKEN-FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEG-KHNPGEILHTLG 80 (388)
Q Consensus 5 ~dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~--~~~~~~~~lgvke~~~~~~~-~~~~g~v~~~~G 80 (388)
.+|.++.+ +.+|.+++|++||+|||.+|.+.+++ +|+.... ...+...++++.. ..+.. ...+. ......
T Consensus 202 ~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~---~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~ 275 (511)
T 2weu_A 202 ERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQT---LGGRFQSFSDVLPNNRAVALRV--PRENDEDMRPY-TTATAM 275 (511)
T ss_dssp TTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCC---TCCCEEECTTTCCCCEEEEEEE--ECSSGGGCCSS-EEEEEE
T ss_pred CCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHH---hCCCCccccccCcccceEEEEe--ccCCCCCCCcc-eeceec
Confidence 34554444 45566899999999999999986543 4554100 1122334454431 22211 02222 222211
Q ss_pred CCCCCCCcceeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHHc----CCCcccccCCCeeeeecceeeccC-CCcC
Q 016489 81 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKH----HPAIKPLLEGGTVVQYGARTLNEG-GLQS 155 (388)
Q Consensus 81 ~p~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~----~P~i~~~l~~~~~~~yga~~ip~g-g~~~ 155 (388)
..|+.|++|..+ .+++|++...+ ..++.+..+.++. .|. +.....+ +.. ++
T Consensus 276 ------~~g~~~~~P~~~-~~~~g~~~~~~----~~~~~~~~~~l~~~~~~~~~----~~~~~~~-------~~~~~~-- 331 (511)
T 2weu_A 276 ------SAGWMWTIPLFK-RDGNGYVYSDE----FISPEEAERELRSTVAPGRD----DLEANHI-------QMRIGR-- 331 (511)
T ss_dssp ------TTEEEEEEECSS-EEEEEEEECTT----TSCHHHHHHHHHHHHCTTCT----TSCCEEE-------ECCCEE--
T ss_pred ------CCCcEEEEECCC-ceEEEEEECCC----CCCHHHHHHHHHHHhCcccc----cccceeE-------Eeeccc--
Confidence 236678888876 78888876432 2344444444432 221 2222322 221 12
Q ss_pred CCccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhh
Q 016489 156 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 217 (388)
Q Consensus 156 ~p~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s~ 217 (388)
.++...+|++||||||++++|+.++|++.||.+|..+|+.+...-.....|+.|++.++..+
T Consensus 332 ~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~~~~~~~l~~Y~~~~~~~~ 393 (511)
T 2weu_A 332 NERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGERWDPVLISAYNERMAHMV 393 (511)
T ss_dssp ESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999888876531001356889998887653
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.28 E-value=2e-10 Score=120.16 Aligned_cols=199 Identities=12% Similarity=-0.003 Sum_probs=113.6
Q ss_pred ecC-eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeE
Q 016489 14 QRG-VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSF 92 (388)
Q Consensus 14 ~~g-~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggw 92 (388)
.+| .+++|++||+|||.+|.+.+++ |+.. +.......++ ...+..+... .. +.+. ....|..|
T Consensus 188 ~~G~~~~~a~~vV~ADG~~S~vR~~l----Gi~~-~~~~~~~~~~--~~~v~~~~~~----~~---~~~~--~~~~G~~~ 251 (570)
T 3fmw_A 188 PSGPYPVRARYGVGCDGGRSTVRRLA----ADRF-PGTEATVRAL--IGYVTTPERE----VP---RRWE--RTPDGILV 251 (570)
T ss_dssp TTEEEEEEESEEEECSCSSCHHHHHT----TCCC-CCCCCCEEEE--EEECCCCSCS----SC---CCCC--CCCSSCEE
T ss_pred CCCcEEEEeCEEEEcCCCCchHHHHc----CCCC-ccceeeeEEE--EEEEEecCCC----cc---eEEE--ecCCEEEE
Confidence 355 5899999999999999887754 7652 1222222222 1112222111 11 1111 11235556
Q ss_pred E-EEcCCCEE-EEEEEEecCCC---CCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEE
Q 016489 93 L-YHMNDRQI-ALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAII 167 (388)
Q Consensus 93 i-y~~~~~~v-sVGlv~~l~~~---~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLv 167 (388)
+ ||..++.. +|.+....... ....++.++.+.+... +...+...+...+- ...+... ...++...++++||
T Consensus 252 ~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~-~~~~~~~-~~a~~~~~grv~Lv 327 (570)
T 3fmw_A 252 LAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARV--RGTPLTLTEPVSWL-SRFGDAS-RQAKRYRSGRVLLA 327 (570)
T ss_dssp ECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSS--SSCCCCCCSCCEEE-EEECCCC-EECSCSEETTEEEC
T ss_pred EEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHH--hhcccccceeeeee-EEeeccc-ccccccccCCEEEE
Confidence 6 78888777 78776653211 1234566666666532 11112211222110 1112211 12457788999999
Q ss_pred ccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHHhhhHHHHHHHHhhhHHHh
Q 016489 168 GCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 233 (388)
Q Consensus 168 GDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~~ 233 (388)
||||..++|+.++|++.||.++..+|+.+.++++. ...|+.|+++.+.. ..+-+...+.+..+|.
T Consensus 328 GDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 328 GDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPV-AERVLLNTRAQLALMR 395 (570)
T ss_dssp GGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHSC
T ss_pred EecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999888865 35689999887763 2333444444444443
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.26 E-value=1.6e-10 Score=115.19 Aligned_cols=181 Identities=15% Similarity=0.132 Sum_probs=107.1
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEE-E-EEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeEEE
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYA-L-GIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLY 94 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~-l-gvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy 94 (388)
.+++|++||+|||.+|.+.+++ +.. .. ...|. . .++.+...++ ..++.....+|.. ..+..|+|
T Consensus 154 ~~~~ad~vV~AdG~~S~vR~~l----~~~---~~-~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~ 219 (410)
T 3c96_A 154 QALGADVLVGADGIHSAVRAHL----HPD---QR-PLSHGGITMWRGVTEFDR--FLDGKTMIVANDE----HWSRLVAY 219 (410)
T ss_dssp EEEEESEEEECCCTTCHHHHHH----CTT---CC-CCEEEEEEEEEEEEEESC--CTTSSEEEEEECT----TCCEEEEE
T ss_pred eEEecCEEEECCCccchhHHHh----cCC---CC-CCCcCCeeEEEeeccccc--ccCCCeEEEecCC----CCcEEEEE
Confidence 5899999999999999998865 322 11 11221 1 1122222221 2234444444431 13567889
Q ss_pred EcCC-----CEEEEEEEEecCC---------C--CCCCChHHHHHHHHcCC----CcccccCCCee-eeecceeeccCCC
Q 016489 95 HMND-----RQIALGLVVALNY---------H--NPFLNPYEEFQKFKHHP----AIKPLLEGGTV-VQYGARTLNEGGL 153 (388)
Q Consensus 95 ~~~~-----~~vsVGlv~~l~~---------~--~~~~~~~~~~~~~k~~P----~i~~~l~~~~~-~~yga~~ip~gg~ 153 (388)
|..+ +...+.+++.... . ....+..++++.+.... .+.++++.... ..+. +. . .
T Consensus 220 p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~-~--~ 294 (410)
T 3c96_A 220 PISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQYP--MV-D--R 294 (410)
T ss_dssp ECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEEEE--EE-E--C
T ss_pred ecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccceee--cc-c--C
Confidence 8752 4455555443210 0 11134456666665321 23344443332 2221 11 1 1
Q ss_pred cCCCccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Q 016489 154 QSIPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKS 216 (388)
Q Consensus 154 ~~~p~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s 216 (388)
..+++...++++||||||..++|+.|+|+..||.++..+|+.+.+.-.....|+.|++..+..
T Consensus 295 ~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~L~~Ye~~r~~~ 357 (410)
T 3c96_A 295 DPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPT 357 (410)
T ss_dssp CCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHH
T ss_pred CCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 124566789999999999999999999999999999999999876311145689999888764
No 15
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.23 E-value=8.8e-11 Score=122.06 Aligned_cols=189 Identities=12% Similarity=0.049 Sum_probs=105.7
Q ss_pred CCeeeee-eecCeEEEecEEEecccCCCccchhHHHhcCCCccc--CCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCC
Q 016489 6 DGSKKEN-FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 82 (388)
Q Consensus 6 dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~--~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p 82 (388)
+|.++.+ +++|.+++|++||+|+|.+|.+.++. +|..... ...+...++.+......+.....+. ......
T Consensus 225 ~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 298 (550)
T 2e4g_A 225 NGNIESVRTATGRVFDADLFVDCSGFRGLLINKA---MEEPFLDMSDHLLNDSAVATQVPHDDDANGVEPF-TSAIAM-- 298 (550)
T ss_dssp TSCEEEEEETTSCEEECSEEEECCGGGCCCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSS-EEEEEC--
T ss_pred CCCEEEEEECCCCEEECCEEEECCCCchhhHHHH---hCCCcccccccccccceEEEeecccCCcccCCCc-eeeeec--
Confidence 4554544 45677899999999999999985432 3543100 0112223444321111110001122 222211
Q ss_pred CCCCCcceeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccC
Q 016489 83 LDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFP 162 (388)
Q Consensus 83 ~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~ 162 (388)
..|+.|++|..+ ...+|++...++ .++.+..+.+...-...+.+...+.+.+. .++ .++...+
T Consensus 299 ----~~g~~~~ipl~~-~~~~g~v~~~~~----~~~~~~~~~l~~~~~~~p~l~~~~~i~~~------~~~--~~~~~~~ 361 (550)
T 2e4g_A 299 ----KSGWTWKIPMLG-RFGTGYVYSSRF----ATEDEAVREFCEMWHLDPETQPLNRIRFR------VGR--NRRAWVG 361 (550)
T ss_dssp ----SSEEEEEEECSS-EEEEEEEECTTT----SCHHHHHHHHHHHTTCCTTTSCCEEEECC------CEE--ESCSEET
T ss_pred ----CCceEEEccCCC-ccceEEEEecCC----CChHHHHHHHHHhhCcCcccCCCceEEec------CCC--ccccccC
Confidence 236667888866 678888764322 23333333333110000112222332211 111 3467789
Q ss_pred CEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhh
Q 016489 163 GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 217 (388)
Q Consensus 163 g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s~ 217 (388)
+++||||||++++|+.++||+.||.++..+|+.+...-.....|+.|++.++..+
T Consensus 362 rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~~~~~~~l~~Y~~~~~~~~ 416 (550)
T 2e4g_A 362 NCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDKSLNPVLTARFNREIETMF 416 (550)
T ss_dssp TEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEehhhcccCccchhhHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998888765421111356889999887753
No 16
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.22 E-value=9.3e-10 Score=113.18 Aligned_cols=186 Identities=9% Similarity=-0.060 Sum_probs=110.6
Q ss_pred eeeeeecCe---EEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCC
Q 016489 9 KKENFQRGV---ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQ 85 (388)
Q Consensus 9 ~~~~~~~g~---~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~ 85 (388)
+.-.++++. +++|++||+|||.+|.+.+++ |+.. ......... +...+.++. .+.....+++
T Consensus 139 v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l----g~~~-~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~----- 203 (500)
T 2qa1_A 139 VTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA----GFDF-PGTAATMEM--YLADIKGVE---LQPRMIGETL----- 203 (500)
T ss_dssp EEEEEEETTEEEEEEESEEEECCCTTCHHHHHT----TCCC-CEECCCCEE--EEEEEESCC---CCCEEEEEEE-----
T ss_pred EEEEEEcCCCCEEEEeCEEEECCCcchHHHHHc----CCCc-CCCccceEE--EEEEEEeCC---CCCceEEEEC-----
Confidence 333355553 799999999999999988764 6652 111222222 222223321 1232221221
Q ss_pred CCcceeEEEEcCCCEEEEEEEEecCCC---CCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccC
Q 016489 86 KTYGGSFLYHMNDRQIALGLVVALNYH---NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFP 162 (388)
Q Consensus 86 ~~~Gggwiy~~~~~~vsVGlv~~l~~~---~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~ 162 (388)
..|..|++|.+++..++++....... ....++.++.+.++... ...+.-.+....+ ..+.. -...++...+
T Consensus 204 -~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~--~~~~~-~~~a~~~~~g 277 (500)
T 2qa1_A 204 -PGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHEVADAWKRLT--GDDIAHAEPVWVS--AFGNA-TRQVTEYRRG 277 (500)
T ss_dssp -TTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHHHHHHHHHHH--SCCCTTSEEEEEE--EEECC-EEECSCSEET
T ss_pred -CCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHhc--CCCCCccceeEEE--EeccC-cEEccccccC
Confidence 13667889998888888876422111 12245666555554210 0111111221110 11111 1113466788
Q ss_pred CEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHH
Q 016489 163 GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQK 215 (388)
Q Consensus 163 g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~ 215 (388)
+++|+||||..+.|+.++|++.||.++...|+.+.+.+++ ...|+.|+++.+.
T Consensus 278 rv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~ 333 (500)
T 2qa1_A 278 RVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHA 333 (500)
T ss_dssp TEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred CEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888765 3568999988665
No 17
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.22 E-value=7.3e-10 Score=114.38 Aligned_cols=190 Identities=14% Similarity=0.001 Sum_probs=110.5
Q ss_pred eeeeeecC---eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCC
Q 016489 9 KKENFQRG---VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQ 85 (388)
Q Consensus 9 ~~~~~~~g---~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~ 85 (388)
+...++++ .+++|++||+|||.+|.+.+++ |+... ........+.+.-...++..........+++-.|
T Consensus 157 v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l----gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 228 (535)
T 3ihg_A 157 VTARLAGPDGEYDLRAGYLVGADGNRSLVRESL----GIGRY-GHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHP--- 228 (535)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT----TCCEE-EEEEEEEEEEEEEECCGGGTSCTTCCEEEEEECS---
T ss_pred EEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc----CCCcC-CCCccceEEEEEEeccChhhccCCceEEEEEECC---
Confidence 33345555 7899999999999999888864 77621 1111112222210001111110111222332112
Q ss_pred CCcceeEEEEcCC-CEEEEEEEEecCCCC--CCCChHHHHHHHHc---CCCcccccCCCeeeeecceeeccCCCcCCCcc
Q 016489 86 KTYGGSFLYHMND-RQIALGLVVALNYHN--PFLNPYEEFQKFKH---HPAIKPLLEGGTVVQYGARTLNEGGLQSIPYP 159 (388)
Q Consensus 86 ~~~Gggwiy~~~~-~~vsVGlv~~l~~~~--~~~~~~~~~~~~k~---~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~ 159 (388)
.+.+|+++..+ +..++.+....+... +..++.+..+.++. .+... -+...... .+.. ....++.
T Consensus 229 --~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~-----~~~~~~~~--~~~~-~~~a~~~ 298 (535)
T 3ihg_A 229 --EFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVK-----PELVDIQG--WEMA-ARIAERW 298 (535)
T ss_dssp --SCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCC-----CEEEEEEE--EEEE-EEEESCS
T ss_pred --CceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCc-----eeEEEeeE--eeee-EEEECcc
Confidence 35578889864 566666655443211 22455544444432 22111 12221111 1110 0113467
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHHh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKS 216 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~s 216 (388)
..++++|+||||..++|+.++|++.||.++..+|+.+...+++ ...|+.|+++.+..
T Consensus 299 ~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~ 358 (535)
T 3ihg_A 299 REGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVA 358 (535)
T ss_dssp EETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHH
T ss_pred ccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHH
Confidence 7899999999999999999999999999999999999988865 46699999888763
No 18
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.21 E-value=1.1e-09 Score=112.51 Aligned_cols=183 Identities=8% Similarity=-0.047 Sum_probs=109.6
Q ss_pred eeecCe---EEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCc
Q 016489 12 NFQRGV---ELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTY 88 (388)
Q Consensus 12 ~~~~g~---~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~ 88 (388)
.++++. +++|++||+|||++|.+.+++ |+.. .........+ ...+.++. .+.....+++ ..
T Consensus 143 ~~~~~~g~~~~~a~~vVgADG~~S~VR~~l----g~~~-~~~~~~~~~~--~~~v~~~~---~~~~~~~~~~------~~ 206 (499)
T 2qa2_A 143 EVEGPDGPRSLTTRYVVGCDGGRSTVRKAA----GFDF-PGTSASREMF--LADIRGCE---ITPRPIGETV------PL 206 (499)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCHHHHHT----TCCC-CEECCCCCEE--EEEEESCC---CCCEEEEEEE------TT
T ss_pred EEEcCCCcEEEEeCEEEEccCcccHHHHHc----CCCC-CCCCCccEEE--EEEEEECC---CCcceEEEEC------CC
Confidence 355553 799999999999999988754 6652 1111111111 11223321 1222211221 13
Q ss_pred ceeEEEEcCCCEEEEEEEEecCC-C--CCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEE
Q 016489 89 GGSFLYHMNDRQIALGLVVALNY-H--NPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGA 165 (388)
Q Consensus 89 Gggwiy~~~~~~vsVGlv~~l~~-~--~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~l 165 (388)
|..|++|.+++..++++...... . ....++.++.+.++... ...+.-.+....+ ..+.. ....++...++++
T Consensus 207 g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~--~~~~~-~~~a~~~~~grv~ 281 (499)
T 2qa2_A 207 GMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQEVAAAWQRLT--GQDISHGEPVWVS--AFGDP-ARQVSAYRRGRVL 281 (499)
T ss_dssp EEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHHHHHHHHHHH--SCCCTTCEEEEEE--EECCC-EEECSCSEETTEE
T ss_pred eEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHHHHHHHHHHh--CCCCCccceeEEE--EEeCC-cEEcccccCCCEE
Confidence 66788999888888887643211 1 12245565555554210 0111111211110 11111 1123466788999
Q ss_pred EEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHH
Q 016489 166 IIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQK 215 (388)
Q Consensus 166 LvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~ 215 (388)
|+||||..+.|+.++|++.||..+...|+.+.+.+++ ...|+.|+++.+.
T Consensus 282 L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~ 334 (499)
T 2qa2_A 282 LAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHP 334 (499)
T ss_dssp ECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHH
T ss_pred EEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888765 4568999988765
No 19
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.20 E-value=3.9e-11 Score=123.93 Aligned_cols=190 Identities=14% Similarity=0.064 Sum_probs=105.2
Q ss_pred CCeeeee-eecCeEEEecEEEecccCCCcc-chhHHHhcCCCcccCC---CCceEEEEEEEEEecCCCCCCCCcEEEEcC
Q 016489 6 DGSKKEN-FQRGVELRGRITLLAEGCRGSL-SEKLIKNFKLREKSHA---QHQTYALGIKEVWEIDEGKHNPGEILHTLG 80 (388)
Q Consensus 6 dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~l-ar~l~~~~gl~~~~~~---~~~~~~lgvke~~~~~~~~~~~g~v~~~~G 80 (388)
+|..+.+ +++|.+++|++||+|||.+|.+ .+. +|+.. ... .+...++.+...+..+.....+. ......
T Consensus 206 ~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 279 (526)
T 2pyx_A 206 HGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEH----LQVPF-LSQKSVLFNDRALAIQVPYSDANSPIASC-THSTAQ 279 (526)
T ss_dssp TSCEEEEEESSSCEEECSEEEECSGGGCCCCCCC----TCCCE-EECHHHHCCCEEEEEEEECSSTTCCCCSS-EEEEEE
T ss_pred CCcEEEEEECCCCEEEcCEEEECCCcchHHHHHH----hCCCc-ccccccccCccEEEEEeeccCCCCCCCCc-eeEEec
Confidence 4554444 4566789999999999999998 443 36541 000 11223444432221111112222 222211
Q ss_pred CCCCCCCcceeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccc
Q 016489 81 WPLDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV 160 (388)
Q Consensus 81 ~p~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~ 160 (388)
..|+.|++|..+ ...+|++...++... .+..+.|.++... ..+.++..+. +.++.... ..++..
T Consensus 280 ------~~g~~~~~pl~~-~~~~~~v~~~~~~~~-~~~~~~l~~~l~~--~~~~l~~~~~-----~~~~~~~~-~~~~~~ 343 (526)
T 2pyx_A 280 ------PNGWIWDIGLPT-RKGVGYVYSSSHTND-IDAQKTLFNYLGV--DGAAADKLEP-----RQLAINPG-YRAKCW 343 (526)
T ss_dssp ------TTEEEEEEECSS-EEEEEEEECTTTCCH-HHHHHHHHHHHTC--CHHHHHHCCC-----EEEECCCE-EESCSE
T ss_pred ------CCCeEEEeeCCC-ceEEEEEecCCCCCh-HHHHHHHHHHHHh--cCcccccCCc-----eEEecccC-cccccc
Confidence 236667788866 677787654432210 1122333333211 0112211111 11221111 134667
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc-CchHHHHHHHHHHhh
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE-DSNMEIYWDTLQKSW 217 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~-~~~l~~Y~~~~~~s~ 217 (388)
.++++||||||++++|+.++|++.||.++..+|+.+.+.... ...++.|++.++..|
T Consensus 344 ~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~~~~~~~l~~Y~~~~~~~~ 401 (526)
T 2pyx_A 344 QNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNRMVMDTISARVNERYQQHW 401 (526)
T ss_dssp ETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999888766421111 346889998887754
No 20
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.19 E-value=5.7e-11 Score=122.94 Aligned_cols=185 Identities=11% Similarity=-0.010 Sum_probs=104.2
Q ss_pred CCeeeee-eecCeEEEecEEEecccCCCccchhHHHhcCCCccc--CCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCC
Q 016489 6 DGSKKEN-FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKS--HAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWP 82 (388)
Q Consensus 6 dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~--~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p 82 (388)
+|..+.+ +.+|.+++|++||+|+|.+|.+.+++ +|..... ...+...++.+......+.....+...... .
T Consensus 195 ~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 268 (538)
T 2aqj_A 195 RGYISNLLTKEGRTLEADLFIDCSGMRGLLINQA---LKEPFIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIA-M-- 268 (538)
T ss_dssp TSCEEEEEETTSCEECCSEEEECCGGGCCCCCCC---TCCCEEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEE-C--
T ss_pred CCcEEEEEECCCcEEEeCEEEECCCCchhhHHHH---hCCCccccccccccceEEEEecccCCcccCCCCceeeee-c--
Confidence 4544444 45566899999999999999985542 3553100 011222344332111100000122222211 1
Q ss_pred CCCCCcceeEEEEcCCCEEEEEEEEecCCCCCCCChHHHHHHHH---cCCCcccccCCCeeeeecceeeccCCCcCCCcc
Q 016489 83 LDQKTYGGSFLYHMNDRQIALGLVVALNYHNPFLNPYEEFQKFK---HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYP 159 (388)
Q Consensus 83 ~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~~~~~~~~k---~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~ 159 (388)
..|+.|++|..+ ..++|++...++ .++.+..+.++ ..+ ++ ..... ++.... ..++.
T Consensus 269 ----~~g~~~~~p~~~-~~~~g~v~~~~~----~~~~~~~~~l~~~~~~~---~~-~~~~~-------~~~~~~-~~~~~ 327 (538)
T 2aqj_A 269 ----NSGWTWKIPMLG-RFGSGYVFSSHF----TSRDQATADFLKLWGLS---DN-QPLNQ-------IKFRVG-RNKRA 327 (538)
T ss_dssp ----SSEEEEEEEETT-EEEEEEEECTTT----SCHHHHHHHHHHHHTCC---TT-CCCEE-------EECCCE-EESCS
T ss_pred ----CCceEEEecCCC-ceEEEEEEcCCC----CChHHHHHHHHHHhcCC---CC-CCceE-------Eeeccc-ccccc
Confidence 246678888876 678888764322 23333333332 111 11 12222 222111 13467
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSW 217 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s~ 217 (388)
..++++||||||++++|+.++|++.||.++..+|+++...-.....|+.|++.++..|
T Consensus 328 ~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~~~~~~~l~~Y~~~~~~~~ 385 (538)
T 2aqj_A 328 WVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDTSFDPRLSDAFNAEIVHMF 385 (538)
T ss_dssp EETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBTTCCHHHHHHHHHHHHHHH
T ss_pred ccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999888777654311001346899999887754
No 21
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.18 E-value=1.1e-09 Score=116.57 Aligned_cols=197 Identities=11% Similarity=0.047 Sum_probs=115.2
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeEEEEc
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHM 96 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy~~ 96 (388)
.+++||+||+|||++|.+.+++ |+.. ......+..++-.+.................+ ..|..|++|.
T Consensus 215 ~~i~A~~VVGADG~~S~VR~~l----g~~~--~g~~~~~~~~v~d~~~~~~~p~~~~~~~~~~~------~~g~~~~~P~ 282 (665)
T 1pn0_A 215 ETVHCKYVIGCDGGHSWVRRTL----GFEM--IGEQTDYIWGVLDAVPASNFPDIRSRCAIHSA------ESGSIMIIPR 282 (665)
T ss_dssp EEEEEEEEEECCCTTCHHHHHH----TCCC--EEEEEEEEEEEEEEEEECCCTTTTSEEEEECS------SSCEEEEEEC
T ss_pred EEEEeCEEEeccCCCCHHHHhc----CCCC--CCCCccEEEEEEEEEECCCCCCcceEEEEEeC------CCceEEEEEc
Confidence 5799999999999999998865 6652 11111122233322111100000111111111 2366788999
Q ss_pred CCCEEEEEEEEecCC------CCCCCChHHHHHHHHc--CCCcccccCCCeeee-ecceeeccCCCcCCCccc-cCCEEE
Q 016489 97 NDRQIALGLVVALNY------HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQ-YGARTLNEGGLQSIPYPV-FPGGAI 166 (388)
Q Consensus 97 ~~~~vsVGlv~~l~~------~~~~~~~~~~~~~~k~--~P~i~~~l~~~~~~~-yga~~ip~gg~~~~p~~~-~~g~lL 166 (388)
+++.+++.+...... .....++.++++.++. .|..-++ +.+. +.. .+.+ ....++.. .++++|
T Consensus 283 ~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~-~r~a~~~~~~gRV~L 355 (665)
T 1pn0_A 283 ENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDV----QQLDWFTA--YHIG-QRVTEKFSKDERVFI 355 (665)
T ss_dssp STTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCEE----EEEEEEEE--EEEE-EEECSCSEETTTEEE
T ss_pred CCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccCce----eeEEEEEe--eecc-ceehhhcccCCCEEE
Confidence 888888887665432 1123466666665542 2321111 1111 111 1111 11134555 699999
Q ss_pred EccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHHhhhHHHHHHHHhhhHHHh
Q 016489 167 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQELQRARNYRPAFE 233 (388)
Q Consensus 167 vGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~~ 233 (388)
+||||-.+.|+.|+|++.||..+...|..+...+++ ...|+.|++..+.. ..+=+...+.+..+|.
T Consensus 356 ~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~-a~~~i~~s~~~~~l~~ 424 (665)
T 1pn0_A 356 AGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPF-AQALIDFDHQFSRLFS 424 (665)
T ss_dssp CGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred EECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998888765 45799999887763 2333444555555554
No 22
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.15 E-value=1.1e-09 Score=107.51 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=51.4
Q ss_pred CccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHH
Q 016489 157 PYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE----DSNMEIYWDTLQK 215 (388)
Q Consensus 157 p~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~----~~~l~~Y~~~~~~ 215 (388)
++...++++||||||..++|+.|+|+..||..+...|+.+.+++.+ ...|+.|++..+.
T Consensus 306 ~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~~ 368 (412)
T 4hb9_A 306 LPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMRA 368 (412)
T ss_dssp CCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred ccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999888765 3458899877665
No 23
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.12 E-value=7e-10 Score=109.98 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=105.1
Q ss_pred eeeeeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEE-EEEEEEecCCCC---------CCCCcEEEE
Q 016489 9 KKENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYAL-GIKEVWEIDEGK---------HNPGEILHT 78 (388)
Q Consensus 9 ~~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~l-gvke~~~~~~~~---------~~~g~v~~~ 78 (388)
+.-.+++|.+++|++||+|||.+|.+.+++ +.. .+..... ++... ++... ...+. .+.
T Consensus 159 v~v~~~~g~~~~ad~vV~AdG~~S~vR~~l----~~~-----~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~g~-~~~ 226 (398)
T 2xdo_A 159 WTLTFENKPSETADLVILANGGMSKVRKFV----TDT-----EVEETGTFNIQAD--IHQPEINCPGFFQLCNGNR-LMA 226 (398)
T ss_dssp EEEEETTSCCEEESEEEECSCTTCSCCTTT----CCC-----CCEEEEEEEEEEE--ESSHHHHSHHHHHHHTTSE-EEE
T ss_pred EEEEECCCcEEecCEEEECCCcchhHHhhc----cCC-----CceEcceEEEEEE--eCchhccCchhHhhcCCce-EEE
Confidence 333466787899999999999999998854 322 1211122 12211 22100 01222 222
Q ss_pred cCCCCCCCCcceeEEEEcCCCEEEEEEEEecCCC--C----CCCChHHHHHHHHc-----CCCcccccCCC-eeeeecce
Q 016489 79 LGWPLDQKTYGGSFLYHMNDRQIALGLVVALNYH--N----PFLNPYEEFQKFKH-----HPAIKPLLEGG-TVVQYGAR 146 (388)
Q Consensus 79 ~G~p~~~~~~Gggwiy~~~~~~vsVGlv~~l~~~--~----~~~~~~~~~~~~k~-----~P~i~~~l~~~-~~~~yga~ 146 (388)
++ | ..+.++++..++.+++++....... . +..++.+..+.+.. +|.+.++++.. ....+...
T Consensus 227 ~~-~-----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (398)
T 2xdo_A 227 SH-Q-----GNLLFANPNNNGALHFGISFKTPDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATR 300 (398)
T ss_dssp EE-T-----TEEEEEEEEETTEEEEEEEEECCTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEE
T ss_pred ec-C-----CCeEEEEeCCCCcEEEEEEEecCcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeE
Confidence 22 1 1234556777788888887654211 1 11344444443321 23344444321 22222222
Q ss_pred eeccCCCcCCCccc-cC--CEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc--CchHHHHHHHHHHh
Q 016489 147 TLNEGGLQSIPYPV-FP--GGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE--DSNMEIYWDTLQKS 216 (388)
Q Consensus 147 ~ip~gg~~~~p~~~-~~--g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~--~~~l~~Y~~~~~~s 216 (388)
.+|.. ++.. .+ +++||||||..++|+.|+|+..||.++..+|+.+.++-.. ...|+.|++..+..
T Consensus 301 ~~~~~-----~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~ 370 (398)
T 2xdo_A 301 IFPLE-----KPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGKFNSIEEAVKNYEQQMFIY 370 (398)
T ss_dssp ECCCC-----SCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHH
T ss_pred eccCC-----CCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHH
Confidence 23321 1222 35 8999999999999999999999999999999998764111 24688898877653
No 24
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.05 E-value=9e-09 Score=108.89 Aligned_cols=196 Identities=12% Similarity=0.115 Sum_probs=108.2
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEE-ecCCCCCCCCcEEEEcCCCCCCCCcceeEEEE
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVW-EIDEGKHNPGEILHTLGWPLDQKTYGGSFLYH 95 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~-~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy~ 95 (388)
.+++||+||+|||.+|.+.+++ |+..........+ ++-.+. ..+-........++. + .|+.|++|
T Consensus 196 ~~i~a~~vVgADG~~S~vR~~l----g~~~~g~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~---~-----~g~~~~~P 261 (639)
T 2dkh_A 196 ETVQARYVVGCDGARSNVRRAI----GRQLVGDSANQAW--GVMDVLAVTDFPDVRYKVAIQS---E-----QGNVLIIP 261 (639)
T ss_dssp EEEEEEEEEECCCTTCHHHHHT----TCCCEECSCSCCE--EEEEEEEEECCTTTTSEEEEEE---T-----TEEEEEEE
T ss_pred EEEEeCEEEECCCcchHHHHHh----CCCCCCCCccceE--EEEEEEEccCCCccceeEEEEc---C-----CceEEEEE
Confidence 5799999999999999987764 6652111111223 322221 111011111111222 1 36678899
Q ss_pred cCCC-EEEEEEEEec--CC---CCCCCChHHHHHHHHc--CCCcccccCCCeeeee-cceee---ccCCCcCCC------
Q 016489 96 MNDR-QIALGLVVAL--NY---HNPFLNPYEEFQKFKH--HPAIKPLLEGGTVVQY-GARTL---NEGGLQSIP------ 157 (388)
Q Consensus 96 ~~~~-~vsVGlv~~l--~~---~~~~~~~~~~~~~~k~--~P~i~~~l~~~~~~~y-ga~~i---p~gg~~~~p------ 157 (388)
..++ .+++.+.... +. .....++.++.+.++. .|..-+ + +.+.+ ....+ ..-.|...|
T Consensus 262 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 337 (639)
T 2dkh_A 262 REGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLE-V---KNVPWWSVYEIGQRICAKYDDVVDAVATP 337 (639)
T ss_dssp CTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEE-E---EEEEEEEEECCCCEECSCSBSCCCSSCCT
T ss_pred cCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCc-c---eeeeEEEecccccchhhhhhccccccccc
Confidence 8777 7777765432 11 1122456665555532 221111 1 11111 10000 001122111
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHHhhhHHH-HHHHHhhhHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKSWVWQE-LQRARNYRPAF 232 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~s~~~~e-l~~~r~~~~~~ 232 (388)
....++++|+||||..+.|+.++|++.||..+...|+.+...+++ ...|+.|++..+.. .++ +...+.+..+|
T Consensus 338 ~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~~~--a~~~~~~s~~~~~~~ 414 (639)
T 2dkh_A 338 DSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQVV--AQQLIDFDREWAKMF 414 (639)
T ss_dssp TSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHHHH--HHHHHHHHHHSCC--
T ss_pred cCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH--HHHHHHHHHHHHHHh
Confidence 112799999999999999999999999999999999999888765 45789999887763 443 33344444444
No 25
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.02 E-value=2.8e-09 Score=105.09 Aligned_cols=76 Identities=16% Similarity=-0.090 Sum_probs=59.6
Q ss_pred CCccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhHHHHHHHHhhhHHH
Q 016489 156 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQKSWVWQELQRARNYRPAF 232 (388)
Q Consensus 156 ~p~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~s~~~~el~~~r~~~~~~ 232 (388)
+++.+.++++||||||..++|+.|+|+..||.++..+|+++.++-.....|+.|++..+.. ..+-+..++.+...|
T Consensus 256 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~~~~~~aL~~Y~~~r~~~-~~~~~~~s~~~~~~~ 331 (381)
T 3c4a_A 256 HDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTEDGVPAALKRFEERALPL-VQLFRGHADNSRVWF 331 (381)
T ss_dssp CSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 3466789999999999999999999999999999999999876411145689999888765 355555555555444
No 26
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.01 E-value=3.2e-09 Score=105.14 Aligned_cols=60 Identities=15% Similarity=-0.035 Sum_probs=49.1
Q ss_pred CCccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Q 016489 156 IPYPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTLQK 215 (388)
Q Consensus 156 ~p~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~~~ 215 (388)
.++.+.++++||||||..+.|+.|+|+..||.++..+|+.+...-.....|+.|++..+.
T Consensus 293 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~L~~Ye~~R~~ 352 (397)
T 2vou_A 293 VDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKNHDLRGSLQSWETRQLQ 352 (397)
T ss_dssp CSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred CCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999998886421113568889886655
No 27
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.92 E-value=4.1e-08 Score=101.93 Aligned_cols=175 Identities=11% Similarity=0.005 Sum_probs=101.4
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCC----CCCCCcEEEEcCCCCCCCCcceeE
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEG----KHNPGEILHTLGWPLDQKTYGGSF 92 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~----~~~~g~v~~~~G~p~~~~~~Gggw 92 (388)
.+++|++||+|||.+|.+.+++ |+.. .........+. -.+..++- ...++. .+++..| . .+.++
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~l----g~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~p--~--~~~~~ 248 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKAL----GIDA-PPRHRTQVFRN--ILFRAPELRSLLGERAAL-FFFLMLS--S--SLRFP 248 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHH----TCCC-CBSSCCEEEEE--EEEECTTHHHHHGGGCCS-EEEEEEE--T--TEEEE
T ss_pred EEEEeCEEEECCCCCcHHHHHc----CCCC-CCCcccceEEE--EEEECCchHHhcCCCCce-EEEEECC--C--CcEEE
Confidence 4799999999999999988865 6652 12222222221 12333210 001222 2322111 0 03467
Q ss_pred EEEcCC-CEEEEEEEEecCCCCCCCCh---HHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCCEEEEc
Q 016489 93 LYHMND-RQIALGLVVALNYHNPFLNP---YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGGAIIG 168 (388)
Q Consensus 93 iy~~~~-~~vsVGlv~~l~~~~~~~~~---~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~lLvG 168 (388)
+++..+ +...+.+ ..+.. + .++ .+.++++...+ +. .+.+......+.. ...++...++++|+|
T Consensus 249 ~~p~~~~~~~~~~~--~~~~~-~-~~~~~~~~~l~~~~~~~-~~-----~~~~~~~~~~~~~---~~a~~~~~grv~L~G 315 (549)
T 2r0c_A 249 LRALDGRGLYRLTV--GVDDA-S-KSTMDSFELVRRAVAFD-TE-----IEVLSDSEWHLTH---RVADSFSAGRVFLTG 315 (549)
T ss_dssp EEESSSSSEEEEEE--ECSTT-C-CSCCCHHHHHHHHBCSC-CC-----CEEEEEEEEEECC---EECSCSEETTEEECG
T ss_pred EEEECCCcEEEEEe--cCCCC-C-CCHHHHHHHHHHHhCCC-Cc-----eeEEEEecchhHh---hhHHhhcCCcEEEEc
Confidence 888754 3455444 22211 1 233 33344332211 11 1222211111111 123466789999999
Q ss_pred cCccccCCCCccchHHHHHHHHHHHHHHHHhhcc---CchHHHHHHHHHHh
Q 016489 169 CAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE---DSNMEIYWDTLQKS 216 (388)
Q Consensus 169 DAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~---~~~l~~Y~~~~~~s 216 (388)
|||..+.|+.++|++.||..+...|+.+...+++ ...|+.|++..+..
T Consensus 316 DAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~ 366 (549)
T 2r0c_A 316 DAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPV 366 (549)
T ss_dssp GGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHH
T ss_pred cccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888765 46799999888763
No 28
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=98.89 E-value=2.9e-10 Score=87.19 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=53.4
Q ss_pred CCeEecCCCCCcccCCCCCCCccccccCCceEEEecCCCC-ceeE--EEecCCCccCCcccccCCCCCeeEECcCCCCC
Q 016489 307 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKN-QLKL--QINAQNCLHCKACDIKDPKQNIKWTVPEGGGG 382 (388)
Q Consensus 307 ~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~-~~~~--~i~~~~C~~Cg~C~~~cp~~~I~w~~p~gg~G 382 (388)
+|+.+ |.+.|+.| +.|+.+||.+++++.+.++. ...+ .++.+.|+.||.|..+||++||+|+...++.-
T Consensus 1 ~~~~~-~~~~C~~C------g~C~~~CP~~a~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~ 72 (80)
T 1jb0_C 1 AHTVK-IYDTCIGC------TQCVRACPTDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAET 72 (80)
T ss_dssp CCEEE-EETTCCCC------CHHHHHCTTCCCEEEECSSSTTSEEEECTTGGGCCCCCHHHHHCCSSSCSEEEECCSCC
T ss_pred CCCcc-cCCcCcCh------hHHHHHCCcccccccccccccccccccCCCCCcCcCcCChhhhCCCCccEeeeecchHH
Confidence 36666 67889987 78999999999988653211 1122 35678999999999999999999998877654
No 29
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=98.84 E-value=1.2e-09 Score=88.92 Aligned_cols=56 Identities=20% Similarity=0.281 Sum_probs=47.4
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEEC
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~ 376 (388)
.|.+.|+.|. .+.|+.+||.+++.+.++ .+.||.+.|++||.|..+||++||++..
T Consensus 3 ~~~~~C~~C~----~~~C~~~CP~~ai~~~~~-----~~~i~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 3 VVTDNCIKCK----YTDCVEVCPVDCFYEGPN-----FLVIHPDECIDCALCEPECPAQAIFSED 58 (106)
T ss_dssp EECGGGTTTC----CCHHHHHCTTCCEEECSS-----CEEECTTTCCCCCTTGGGCTTCCEEEGG
T ss_pred ECccccCCcc----CcHHHHHcCccceEcCCC-----cEEECcccCCChhhhHHhCCChhhhccc
Confidence 3678899872 128999999999988654 6889999999999999999999999763
No 30
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=98.81 E-value=2e-09 Score=83.53 Aligned_cols=54 Identities=17% Similarity=0.132 Sum_probs=47.8
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEE
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg------~C~~~cp~~~I~w~ 375 (388)
+.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|+ .|..+||++||++.
T Consensus 2 ~~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (82)
T 3eun_A 2 LMITDECINC------DVCEPECPNGAISQGDE-----TYVIEPSLCTECVGHYETSQCVEVCPVDAIIKD 61 (82)
T ss_dssp EEECTTCCCC------CTTGGGCTTCCEEECSS-----SEEECGGGCCTTTTTCSSCHHHHHCTTCCEEEC
T ss_pred eEeCCCCcCc------cchHHHCChhheEcCCC-----ceEEchhhcCCCCCCCCccHHHHhCCccceEEc
Confidence 3467899987 79999999999998654 6899999999999 99999999999986
No 31
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=98.80 E-value=1.1e-09 Score=88.34 Aligned_cols=64 Identities=22% Similarity=0.375 Sum_probs=50.9
Q ss_pred CCeEecCCCCCcccCCCCCCCccccccCCceEEEecCCC----CceeEEEecCCCccCCcccccCCCCCeeEECc
Q 016489 307 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEK----NQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 377 (388)
Q Consensus 307 ~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~----~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p 377 (388)
.++.+ |.+.|+.| +.|+.+||.+++++.+..+ ....+.++.+.|+.||.|..+||++||+|..|
T Consensus 36 ~~~~i-d~~~C~~C------g~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 36 TIVGV-DFDLCIAD------GSCINACPVNVFQWYDTPGHPASEKKADPVNEQACIFCMACVNVCPVAAIDVKPP 103 (103)
T ss_dssp SSEEE-ETTTCCCC------CHHHHHCTTCCCEEEECTTCSSCSEEEECTTGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred ceEEE-ehhhCCCh------hhHHHHcCccCeecccccCccccccceeecCcccccChhhHHHhccccceEecCC
Confidence 35555 78999987 7999999999998865321 11235678899999999999999999998765
No 32
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=98.80 E-value=6.6e-09 Score=74.56 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=44.7
Q ss_pred CeEecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEE--EecCCCccCCcccccCCCCCeeEE
Q 016489 308 HLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQ--INAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 308 Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~--i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
|+.+ |.+.|++| +.|+++|| .++++.++ ++ +.. ++.+.|..|+.|..+||++||+|+
T Consensus 1 ~i~i-~~~~C~~C------~~C~~~Cp-~~~~~~~~-~~--~~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (59)
T 1dwl_A 1 TIVI-DHEECIGC------ESCVELCP-EVFAMIDG-EE--KAMVTAPDSTAECAQDAIDACPVEAISKE 59 (59)
T ss_dssp CEEE-SSCCCSSC------CGGGGTST-TTEEEEEC-SS--CEEESCTTCCCGGGGTGGGGSTTCCEEEC
T ss_pred CeEE-ChhhCcCh------hHHHHHCC-HHheecCC-CC--cEEEecChhhhhHHHHHHHhCCHhhEEcC
Confidence 3445 77899987 78999999 58887322 13 333 589999999999999999999874
No 33
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=98.78 E-value=3.4e-09 Score=75.55 Aligned_cols=50 Identities=22% Similarity=0.335 Sum_probs=43.7
Q ss_pred CCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeE
Q 016489 314 PKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 314 ~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w 374 (388)
.+.|++| +.|+.+||.+++++.++ .+.+|.+.|++||.|..+||++||++
T Consensus 5 ~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 5 NEACISC------GACEPECPVNAISSGDD-----RYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp CTTCCCC------CTTGGGCTTCCEECCSS-----SCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred cccCcCh------hhHHHHCCccccCcCCC-----EEEeccccCcChhChHHHccccceec
Confidence 5678886 78999999999987643 46799999999999999999999976
No 34
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=98.77 E-value=3.3e-09 Score=81.08 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=47.3
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.|++.|++|. ++.|+.+||.+++++.++ .+.+|.+.|++||.|..+||++||++.
T Consensus 3 i~~~~C~~c~----C~~C~~~Cp~~ai~~~~~-----~~~~~~~~C~~Cg~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 3 VITEPCIGTK----DASCVEVCPVDCIHEGED-----QYYIDPDVCIDCGACEAVCPVSAIYHE 57 (77)
T ss_dssp ECCSTTTTCC----CCSSTTTCTTCCEEECSS-----SEEECTTTCCSCCSHHHHSGGGSSEET
T ss_pred EeCccCCCCC----cchhHHhcccccEEeCCC-----cEEECcccCcCccCCHhhcCccceEec
Confidence 4678898842 379999999999988643 588999999999999999999999875
No 35
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=98.76 E-value=3.5e-09 Score=85.88 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=47.2
Q ss_pred CCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
|.+.|+.|. ++.|+.+||.+++.+.++ .+.+|.+.|+.||.|..+||++||++.
T Consensus 4 ~~~~C~~C~----c~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~Cg~C~~~CP~~Ai~~~ 57 (105)
T 2v2k_A 4 IAEPCVDVK----DKACIEECPVDCIYEGAR-----MLYIHPDECVDCGACEPVCPVEAIYYE 57 (105)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----CEEECTTTCCCCCCSGGGCTTCCEEEG
T ss_pred ecccCCCCC----cChhhhhcCccccCcCCC-----cEEEeCCcCcchhhHHHhCCccCEEec
Confidence 567898764 489999999999988654 588999999999999999999999876
No 36
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=98.73 E-value=5e-09 Score=81.05 Aligned_cols=55 Identities=16% Similarity=0.175 Sum_probs=47.8
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEEC
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWTV 376 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg------~C~~~cp~~~I~w~~ 376 (388)
+.+.+.|++| +.|+.+||.+++.+.++ .+.+|.+.|+.|+ .|..+||++||++..
T Consensus 2 ~~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 2 LKITDDCINC------DVCEPECPNGAISQGEE-----IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp BCCCTTCCCC------CTTGGGCTTCCEEECSS-----SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred ceeCCCCCCh------hhHHHHCChhccCCCCC-----eEEEEchhCccCCCcCCCCHhHhhCCcccEEccC
Confidence 3567889987 78999999999998654 5889999999999 999999999998753
No 37
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=98.72 E-value=3.3e-09 Score=81.38 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=46.5
Q ss_pred CCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
|.+.|++|. ++.|+++||.+++.+.++ .+.+|.+.|++||.|..+||++||++.
T Consensus 4 ~~~~C~~c~----C~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 57 (78)
T 1h98_A 4 ICEPCIGVK----DQSCVEVCPVECIYDGGD-----QFYIHPEECIDCGACVPACPVNAIYPE 57 (78)
T ss_dssp ECGGGTTTC----CCHHHHHCTTCCEEECSS-----SEEECTTTCCCCCTHHHHCTTCCEEEG
T ss_pred EchhCCCCC----cChhhhhcCccceEcCCC-----EEEECcccCCcHhHHHHhCCccceEec
Confidence 567898843 379999999999988653 588999999999999999999999865
No 38
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=98.68 E-value=5.4e-09 Score=80.50 Aligned_cols=53 Identities=15% Similarity=0.177 Sum_probs=46.6
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC------cccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg------~C~~~cp~~~I~w~ 375 (388)
.|.+.|++| +.|+.+||.+++++.++ .+.+|.+.|+.|+ .|..+||++||++.
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 3 YINDDCTAC------DACVEECPNEAITPGDP-----IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp CCCSCCCCC------CTTTTTCTTCCEECCSS-----SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred EeCCCCcCh------hhHHHHcChhccCcCCC-----eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 467889987 68999999999987654 5788999999999 99999999999875
No 39
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.67 E-value=6.6e-09 Score=91.80 Aligned_cols=61 Identities=16% Similarity=0.238 Sum_probs=48.7
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.|.+.|+.|..- -...|+.+||.+++.+.++ +.+.+.+|.+.|+.||.|+.+||++||++.
T Consensus 4 id~~~C~gC~~c-~~~~C~~~CP~~ai~~~~~--~~~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~ 64 (166)
T 3gyx_B 4 VDPSKCDGCKGG-EKTACMYICPNDLMILDPE--EMKAFNQEPEACWECYSCIKICPQGAITAR 64 (166)
T ss_dssp ECTTTCCCCCSS-SCCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCSSCCEEEC
T ss_pred EcchhcCCCCCC-CcchhHHhCCccccEEecC--CceeEecCcccCcccChHhHhCCccceEEe
Confidence 488999997200 0128999999999998765 334567899999999999999999999865
No 40
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=98.67 E-value=7.3e-09 Score=89.98 Aligned_cols=56 Identities=14% Similarity=0.262 Sum_probs=48.1
Q ss_pred cCCCCCcccCCCCCCC-----ccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAG-----PESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~-----~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.|.+.|++| + .|+++||.++++++++ +.+.+.+|.+.|++||.|+.+||++||++.
T Consensus 5 vd~~~C~~C------~~~~~~~C~~~CP~~ai~~~~~--~~~~~~id~~~C~~Cg~Cv~~CP~~AI~~~ 65 (150)
T 1jnr_B 5 VNPEKCDGC------KALERTACEYICPNDLMTLDKE--KMKAYNREPDMCWECYSCVKMCPQGAIDVR 65 (150)
T ss_dssp ECTTTCCSC------CSSSSCHHHHHCTTSCEEEETT--TTEEEESCGGGCCCCCHHHHHCTTCCEEEC
T ss_pred ECcccCCCC------CCcccccchhhcCccCeEEecC--CceeeeeCcccCcCHhHHHHhCCccceEec
Confidence 478899987 6 8999999999998764 223478999999999999999999999875
No 41
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=98.54 E-value=1.6e-08 Score=78.92 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=46.2
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC------cccccCCC-CCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK------ACDIKDPK-QNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg------~C~~~cp~-~~I~w~ 375 (388)
.+.+.|++| +.|+.+||.+++.+.++ .+.+|.+.|+.|| .|..+||+ +||++.
T Consensus 3 ~~~~~C~~C------~~C~~~CP~~ai~~~~~-----~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 3 LITKKCINC------DMCEPECPNEAISMGDH-----IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp EECTTCCCC------CTTTTTCTTCCEECCSS-----SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred EeCCcCcCh------hHHHHHCchhccCcCCC-----ceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 356889987 68999999999987654 5789999999999 99999999 999874
No 42
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=98.52 E-value=3.2e-08 Score=87.58 Aligned_cols=57 Identities=21% Similarity=0.268 Sum_probs=46.7
Q ss_pred CCCCCcccCCCCCCCccccccCCceEEEecCCC-----------CceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEK-----------NQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~-----------~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
|.+.|+.| +.|+.+||.+++.+..++. ....+.++.+.|+.||.|..+||++||.+.
T Consensus 49 d~~~Ci~C------~~C~~~CP~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 116 (182)
T 3i9v_9 49 GLEKCIGC------SLCAAACPAYAIYVEPAENDPENPVSAGERYAKVYEINMLRCIFCGLCEEACPTGAIVLG 116 (182)
T ss_dssp SCBSCCCC------CHHHHHCTTCCEEEEEECCCSSSCSSSSSCEEEEEEEETTTCCCCCHHHHHCSSSCEEEC
T ss_pred CCccCccc------ccchhhCCcccEEeecccccccccccccccccceeecCCCcCcChhChhhhCCccceEec
Confidence 56789987 6899999999998764311 012568899999999999999999999876
No 43
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.45 E-value=4.3e-06 Score=83.85 Aligned_cols=180 Identities=12% Similarity=0.058 Sum_probs=97.4
Q ss_pred EecEEEecccCCCccchhHHHhcCCCcc--cCCCCce-EEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcceeEEEEc
Q 016489 20 RGRITLLAEGCRGSLSEKLIKNFKLREK--SHAQHQT-YALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYGGSFLYHM 96 (388)
Q Consensus 20 ~Ak~vI~AdG~~s~lar~l~~~~gl~~~--~~~~~~~-~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~Gggwiy~~ 96 (388)
++++||+|+|.+|.+.. ++.... ....++. ..++.. ..+..... .+.....+ | ..|..|++|.
T Consensus 155 ~ad~VV~AdG~~S~~~~-----~~~~~~~~~~~~p~r~~~~~~~--~g~~~~~~-~~~~~~~~--~----~~G~~~~~p~ 220 (430)
T 3ihm_A 155 QYDLLVVCTGKYALGKV-----FEKQSENSPFEKPQRALCVGLF--KGIKEAPI-RAVTMSFS--P----GHGELIEIPT 220 (430)
T ss_dssp TSSEEEECCCCTTGGGG-----SCBCGGGCCCSSCSSEEEEEEE--ESBCCCSS-CCEEEEEE--T----TTEEEEEEEE
T ss_pred cCCEEEECCCCcchHHh-----ccCCCCCCcccCCCeeEEEEEE--ccCCCCCc-Ceeeeeec--C----CCcceEEecc
Confidence 68999999999987642 232210 0112222 222222 12222211 22223332 1 1355577774
Q ss_pred --CCCEEEEEEEEecCC------CCCC--CChHHH----HHHHH-cCCCcccccCCCeeeeec-ceeeccCCC-----cC
Q 016489 97 --NDRQIALGLVVALNY------HNPF--LNPYEE----FQKFK-HHPAIKPLLEGGTVVQYG-ARTLNEGGL-----QS 155 (388)
Q Consensus 97 --~~~~vsVGlv~~l~~------~~~~--~~~~~~----~~~~k-~~P~i~~~l~~~~~~~yg-a~~ip~gg~-----~~ 155 (388)
.++.+++.++....- .... .++.+. .+.|. .+|.+.+++...+..... ...+..+.+ ..
T Consensus 221 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 300 (430)
T 3ihm_A 221 LSFNGMSTALVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDG 300 (430)
T ss_dssp EETTEEEEEEEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCS
T ss_pred cCCCcceEEEEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeeccccc
Confidence 345677766654321 1110 245433 33333 356666666654411100 000001111 11
Q ss_pred CCccccCCEEE-EccCccccCCCCccchHHHHHHHHHHHHHHHHhhccCchHHHHHHHH
Q 016489 156 IPYPVFPGGAI-IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHEDSNMEIYWDTL 213 (388)
Q Consensus 156 ~p~~~~~g~lL-vGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~~~~l~~Y~~~~ 213 (388)
+++...++++| +||||..++|+.++|+..||.++..+|+.+.+.-.-...|..|+..-
T Consensus 301 ~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~~~~~~~~~~~~~r 359 (430)
T 3ihm_A 301 HATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHSVYDLRFSEHLERR 359 (430)
T ss_dssp EEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCSCCSHHHHHHHHHH
T ss_pred ccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 23556677877 99999999999999999999999999999987532256688886443
No 44
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=98.45 E-value=2.3e-08 Score=73.33 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=43.6
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEe--cCCCccCCcccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~--~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.|.+.|++| +.|+.+|| +++++.++. + +...++ .+.|.+|+.|..+||++||++.
T Consensus 6 id~~~C~~C------g~C~~~CP-~~~~~~~~~-~-~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 6 VDQDECIAC------ESCVEIAP-GAFAMDPEI-E-KAYVKDVEGASQEEVEEAMDTCPVQCIHWE 62 (64)
T ss_dssp ECSTTCCSC------CHHHHHCT-TTEEECSSS-S-SEEECCGGGSCHHHHHHHHHHSSSCCEECC
T ss_pred EccccCCCc------hHHHHhCC-ccEeEcCCC-C-EEEEecCCCcchhHHHHHHHhCCHhhEeee
Confidence 478899997 78999999 898876431 2 123344 7899999999999999999864
No 45
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=98.41 E-value=2.7e-08 Score=71.53 Aligned_cols=56 Identities=18% Similarity=0.217 Sum_probs=42.2
Q ss_pred eEecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEE-ecCCCccCCcccccCCCCCeeEE
Q 016489 309 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 309 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i-~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
+.+ |.+.|++| +.|+++||. ++.+.++ +. ...+ +.+.|..|+.|..+||++||++.
T Consensus 3 ~~i-~~~~C~~C------~~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 3 VRV-DADACIGC------GVCENLCPD-VFQLGDD--GK-AKVLQPETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp SEE-CTTTCCSC------CSSTTTCTT-TBCCCSS--SC-CCBSCSSCCSTTHHHHHHHCTTCCEECC
T ss_pred EEE-chhhCCCC------hHHHHhCcH-HHeECCC--CC-EeecCchhhHHHHHHHHHhCCHhHEEEe
Confidence 444 78899987 789999997 6665432 31 2233 37899999999999999999864
No 46
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=98.36 E-value=6e-08 Score=69.53 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=42.7
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEe--cCCCccCCcccccCCCCCeeE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN--AQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~--~~~C~~Cg~C~~~cp~~~I~w 374 (388)
.| +.|++| +.|+++||. ++.+.++ + +.+.++ .+.|..|+.|..+||++||++
T Consensus 4 id-~~C~~C------~~C~~~CP~-~~~~~~~--~-~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~ 57 (58)
T 1f2g_A 4 VN-DDCMAC------EACVEICPD-VFEMNEE--G-DKAVVINPDSDLDCVEEAIDSCPAEAIVR 57 (58)
T ss_dssp CT-TTCCCC------CHHHHHCTT-TEEECSS--S-SSEEESCTTCCSTHHHHHHHTCSSCCCBC
T ss_pred EC-CcCccc------hHHHHhCCc-cEEECCC--C-cEEEeCCCccchHHHHHHHhhCChhhEEe
Confidence 36 889987 789999998 7776543 2 246778 899999999999999999975
No 47
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=98.31 E-value=2.3e-07 Score=83.96 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=50.8
Q ss_pred CCCeE-ecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 016489 306 PAHLR-LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 377 (388)
Q Consensus 306 ~~Hl~-v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p 377 (388)
.+++. ..+++.|..|. ..+|+.+||.+++...++ + .+.+|.+.|+.|+.|..+||++||++...
T Consensus 46 ~~~~~~~~~~~~C~~C~----~p~C~~~CP~gAi~~~~~--g--~~~id~~~CigC~~C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 46 YPNLVVEFRPEQCLHCE----NPPCVPVCPTGASYQTKD--G--LVLVDPKKCIACGACIAACPYDARYLHPA 110 (195)
T ss_dssp TTSCEEEEEEEECCCCS----SCTTTTTCSSSCEEECTT--S--CEEECTTTCCCCCHHHHHCTTCCCEECTT
T ss_pred CCceeEEECcccCcCcc----CcHHHHhcCCCceecccc--c--ceeecCCCCCCcChhHhhCCCCCeEECCC
Confidence 34443 23578898874 237999999999988643 4 68999999999999999999999998643
No 48
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=98.31 E-value=1.2e-07 Score=95.67 Aligned_cols=56 Identities=20% Similarity=0.262 Sum_probs=46.4
Q ss_pred eEecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEE-ecCCCccCCcccccCCCCCeeE
Q 016489 309 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQI-NAQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 309 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i-~~~~C~~Cg~C~~~cp~~~I~w 374 (388)
..+.|.+.|+.| +.|+++||.+++...++ . ...+ +.+.|+.||.|+.+||++||.+
T Consensus 27 ~i~~d~~kCi~C------g~C~~~CP~~ai~~~~~--~--~~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 27 FVQIDEAKCIGC------DTCSQYCPTAAIFGEMG--E--PHSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp SEEECTTTCCCC------CHHHHHCTTCCCBCCTT--S--CCBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred eEEECcccCCCc------cHHHHhcCcCceecccc--c--ceeecChhhCCchhhHHHhhCcCCccc
Confidence 445688999997 79999999999876433 1 2445 8999999999999999999987
No 49
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=98.28 E-value=1.7e-07 Score=72.18 Aligned_cols=55 Identities=16% Similarity=0.090 Sum_probs=44.2
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEe-----------cCCCccCCcccccCCCCCeeEECc
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN-----------AQNCLHCKACDIKDPKQNIKWTVP 377 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~-----------~~~C~~Cg~C~~~cp~~~I~w~~p 377 (388)
.|.+.|++| +.|+.+|| +++++.++ + +..+. .+.|..|+.|..+||++||++.-.
T Consensus 6 vd~~~CigC------g~C~~~CP-~~~~~~~~--g--~~~~~~~~~~~~~~~~~~~c~~C~~C~~~CP~~AI~~~~~ 71 (81)
T 1iqz_A 6 VDKETCIAC------GACGAAAP-DIYDYDED--G--IAYVTLDDNQGIVEVPDILIDDMMDAFEGCPTDSIKVADE 71 (81)
T ss_dssp ECTTTCCCC------SHHHHHCT-TTEEECTT--S--CEEETTTTTSSCSCCCGGGHHHHHHHHHHCTTCCEEEESS
T ss_pred EecccCccc------ChhhHhCc-hheeeCCC--C--eEEEeccCccccCCCCHHHHHHHHHHHHhCCHhHEEEecC
Confidence 488999997 79999999 78887543 3 23332 568999999999999999998754
No 50
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=98.16 E-value=5.4e-07 Score=88.58 Aligned_cols=59 Identities=12% Similarity=0.163 Sum_probs=48.8
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 377 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p 377 (388)
.+++.|..|. ..+|+.+||.+++...+. ++ .+.+|.+.|+.|+.|+.+||++||++...
T Consensus 146 ~~~~~C~~C~----~~~Cv~~CP~gAi~~~~~-~g--~v~id~~kCigCg~Cv~aCP~~Ai~~~~~ 204 (352)
T 2ivf_B 146 YLARMCNHCT----NPACLAACPTGAIYKRED-NG--IVLVDQERCKGHRHCVEACPYKAIYFNPV 204 (352)
T ss_dssp EEEECCCCCS----SCHHHHHCTTCCEEECTT-TC--CEEECTTTCCCCCHHHHHCTTCCEEEETT
T ss_pred ECCCCCcCcC----CccccccCCCCceeecCC-CC--eEEechhhcCCchHHHhhcCccceecccc
Confidence 4678999983 238999999999987642 24 68899999999999999999999998743
No 51
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=98.14 E-value=2.4e-07 Score=92.37 Aligned_cols=57 Identities=21% Similarity=0.377 Sum_probs=45.2
Q ss_pred CCCCCc-ccCCCCCCCccccccCCceEEEecCC-CCc--eeEEEecCCCccCCcccccCCCCCee
Q 016489 313 DPKIPE-LVNLPEYAGPESRYCPARVYEYVPDE-KNQ--LKLQINAQNCLHCKACDIKDPKQNIK 373 (388)
Q Consensus 313 d~~~c~-~~~~~~~~~~c~~~CPa~~y~~~~~~-~~~--~~~~i~~~~C~~Cg~C~~~cp~~~I~ 373 (388)
|.+.|. .|+ ++.|+.+||.+|+++.+.+ +|+ +.+.||.++|+.||.|+.+||++||+
T Consensus 214 d~e~~~~~Ce----~~~cv~~CPt~AI~~~~~~~~g~~~~~v~id~~~Ci~Cg~C~~~CP~~Ai~ 274 (386)
T 3or1_B 214 DHENLAELCE----IPLAVAACPTAAVKPITAEVNGQKVKSVAINNDRCMYCGNCYTMCPALPLS 274 (386)
T ss_dssp CTTTHHHHCC----HHHHHHHCTTCCEEEEEEEETTEEEEEEEECTTTCCCCCHHHHHCTTCCCC
T ss_pred chhhhccccc----chhhhhhCchhhccccccccCCccccccccCCCcCCccccHHHhCcHhhCc
Confidence 556664 354 3789999999999986421 242 47999999999999999999999984
No 52
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=98.11 E-value=1.3e-06 Score=83.03 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=46.8
Q ss_pred CCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECcC
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVPE 378 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p~ 378 (388)
.+..|..|. ..+|+.+||+ ++...++ + .+.+|.++|+.|+.|..+||++||++....
T Consensus 64 ~~~~C~~C~----~p~C~~~CP~-Ai~~~~~--g--~v~id~~~CigC~~C~~~CP~~Ai~~~~~~ 120 (274)
T 1ti6_B 64 RPTPCMHCE----NAPCVAKGNG-AVYQRED--G--IVLIDPEKAKGKKELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp EEECCCCCT----TCHHHHHTTT-SEEECTT--S--CEEECTTTTTTCGGGGGGCSSCCCEEETTT
T ss_pred cCCcCCCCC----ChHHHhhChH-HhhhccC--C--cEEechhhccchHHHHhhCccCCeEEEccc
Confidence 467888885 2469999999 8876532 4 689999999999999999999999987543
No 53
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=98.11 E-value=1.2e-06 Score=84.13 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=47.4
Q ss_pred CCCCCcccCCCCCCCccccccCC-ceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEEC
Q 016489 313 DPKIPELVNLPEYAGPESRYCPA-RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa-~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~ 376 (388)
+++.|..|. ..+|+.+||. +++...++ + .+.+|.+.|+.||.|..+||+++|++..
T Consensus 96 ~~~~C~~C~----~~~C~~~CP~~gAi~~~~~--g--~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 96 RKDGCMHCE----DPGCLKACPSAGAIIQYAN--G--IVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp EEESCCCBS----SCHHHHHCCSTTSEEEETT--S--CEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred CcccCCCcC----ChhhhhhCCccCccccccc--c--ceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 567898874 2389999999 99987543 4 7999999999999999999999999864
No 54
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=98.09 E-value=9.1e-07 Score=90.67 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=49.1
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEECc
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWTVP 377 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~~p 377 (388)
.+++.|..|. ..+|+.+||.+++.+..+ ++ .+.+|.++|+.||.|..+||++||++...
T Consensus 179 ~~~~~C~~C~----~~~Cv~aCP~gAI~~~~~-~g--~v~id~~kCigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 179 YLPRLCEHCL----NPACVATCPSGAIYKREE-DG--IVLIDQDKCRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp EEEECCCCCS----SCHHHHTCTTCCEEEETT-TC--CEEECTTTCCCCCCHHHHCTTCCEEEETT
T ss_pred ecCccCcCCC----CchhhhhCCcCcEEeecC-CC--eEEECHHHCCCchHHHhhCCccceecccC
Confidence 3678999884 237999999999988642 23 68999999999999999999999998743
No 55
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=98.05 E-value=5.5e-07 Score=89.13 Aligned_cols=54 Identities=11% Similarity=0.310 Sum_probs=44.3
Q ss_pred CCCCC-cccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCee
Q 016489 313 DPKIP-ELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIK 373 (388)
Q Consensus 313 d~~~c-~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~ 373 (388)
|.+.| ..|+ ++.|+.+||.+|+++.++ ++ .+.||.++|+.||.|+.+||++||+
T Consensus 203 d~~~c~~~Ce----~~~Cv~~CP~~AI~~~~~-~~--~~~id~~~C~~Cg~C~~~CP~~Ai~ 257 (366)
T 3mm5_B 203 NDEAIRKTCE----IPSTVAACPTGALKPDMK-NK--TIKVDVEKCMYCGNCYTMCPGMPLF 257 (366)
T ss_dssp CHHHHHHHCC----HHHHHHTCTTCCEEEETT-TT--EEEECGGGCCCCCHHHHHCTTCCCC
T ss_pred cchhcccccc----ccchhccCCccceEecCC-CC--eEEEehhhCCCcchHHHhCCHhhcc
Confidence 54455 4554 378999999999999753 23 8999999999999999999999985
No 56
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=98.02 E-value=5.6e-07 Score=65.76 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=41.5
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEe---cC--CCccCCcccccCCCCCeeEE
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQIN---AQ--NCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~---~~--~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.|.+.|++| +.|+.+||. +++++++ +. ...++ .+ .|..|+.|..+||++||+++
T Consensus 6 id~~~C~~C------~~C~~~Cp~-~~~~~~~--~~-~~~~~~~~~~~~~c~~c~~C~~~CP~~Ai~~~ 64 (66)
T 1sj1_A 6 VDQDTCIGD------AICASLCPD-VFEMNDE--GK-AQPKVEVIEDEELYNCAKEAMEACPVSAITIE 64 (66)
T ss_dssp ECTTTCCCC------CHHHHHCTT-TEEECTT--SC-EEESCSCBCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred ECcccCcCc------hHHHHhCCc-eEEECCC--Cc-eeecccCCCcHHHHHHHHHHHhhCCHhhEEEe
Confidence 478999987 789999995 8887543 31 23444 23 47889999999999999875
No 57
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=97.95 E-value=2.2e-06 Score=90.20 Aligned_cols=63 Identities=21% Similarity=0.358 Sum_probs=50.3
Q ss_pred CCeEecCCCCCc--ccCCCCCCCccccccCC-----ceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeE-ECc
Q 016489 307 AHLRLRDPKIPE--LVNLPEYAGPESRYCPA-----RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW-TVP 377 (388)
Q Consensus 307 ~Hl~v~d~~~c~--~~~~~~~~~~c~~~CPa-----~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w-~~p 377 (388)
-+|-|.|.|.|. +|+ .-|.++||. .|+++.++ ++ +..|..+-|++||.|+.+||++||+- +.|
T Consensus 6 ~~~~~~~~~~c~~~~~~-----~~c~~~cp~~~~~~~~~~~~~~-~~--~~~i~~~~c~~~~~~~~~cp~~~i~i~nl~ 76 (608)
T 3j16_B 6 SRIAIVSADKCKPKKCR-----QECKRSCPVVKTGKLCIEVTPT-SK--IAFISEILCIGCGICVKKCPFDAIQIINLP 76 (608)
T ss_dssp EEEEEECSSSCCHHHHC-----SHHHHHCHHHHHTCCSEEEETT-TT--EEEECTTTCCCCCHHHHHCSSCCEEEEEES
T ss_pred ceEEEEeccccCccccc-----cchhhcCCCccCCceEEEEcCC-CC--ceEEehhhccccccccccCCccceEEecCC
Confidence 356677888885 464 579999996 38888654 23 79999999999999999999999984 355
No 58
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=97.91 E-value=5e-06 Score=93.78 Aligned_cols=59 Identities=22% Similarity=0.368 Sum_probs=47.6
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEe---cCC------------------CC-ceeEEEecCCCccCCcccccCC
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYV---PDE------------------KN-QLKLQINAQNCLHCKACDIKDP 368 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~---~~~------------------~~-~~~~~i~~~~C~~Cg~C~~~cp 368 (388)
+.|.+.|+.| +.|+++||.+++... +++ ++ ...+.++.+.|+.||.|+.+||
T Consensus 682 ~~d~~kCi~C------g~Cv~vCP~~AI~~~~~~~~e~~~ap~g~~~~~~~~k~~~g~~~~~~v~~~~C~gCG~Cv~vCP 755 (1231)
T 2c42_A 682 QWVPENCIQC------NQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICP 755 (1231)
T ss_dssp EECTTTCCCC------CHHHHHCSSCCEEEEEECGGGGTTCCTTCCCEECCSGGGTTCEEEEEECTTTCCCCCHHHHHCS
T ss_pred EEeCccCCch------hhHHHhCCcccccccccchHHHhhCcccccccccccccccccccceeechhhCCChhHHHhhCC
Confidence 5689999997 689999999999864 110 01 1257899999999999999999
Q ss_pred C--CCeeEE
Q 016489 369 K--QNIKWT 375 (388)
Q Consensus 369 ~--~~I~w~ 375 (388)
+ +||+..
T Consensus 756 ~~~~AI~~~ 764 (1231)
T 2c42_A 756 PKEKALVMQ 764 (1231)
T ss_dssp SSSCSEEEE
T ss_pred CCccCeEEe
Confidence 9 999875
No 59
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=97.77 E-value=5.2e-06 Score=83.29 Aligned_cols=41 Identities=24% Similarity=0.540 Sum_probs=37.0
Q ss_pred CccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCe
Q 016489 327 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNI 372 (388)
Q Consensus 327 ~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I 372 (388)
+.|+.+||.+|++++.. ++.||.++|++||.|+.+||+.++
T Consensus 261 ~~cv~~CPt~Ai~~~~~-----~~~id~~~Ci~Cg~Ci~~CP~~~~ 301 (418)
T 3mm5_A 261 NEVVKLCPTGAIKWDGK-----ELTIDNRECVRCMHCINKMPKALK 301 (418)
T ss_dssp HHTGGGCTTCCEEECSS-----CEEECTTTCCCCCHHHHHCTTTEE
T ss_pred ccccccCCccccccCCc-----eeEEChhhcCccChhHHhCcHhhc
Confidence 67999999999999643 899999999999999999999764
No 60
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.77 E-value=2e-06 Score=89.90 Aligned_cols=57 Identities=21% Similarity=0.304 Sum_probs=46.4
Q ss_pred ecCCCCCcccCCCCCCCccccccCC----ceEEEecCCCCce-------eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPA----RVYEYVPDEKNQL-------KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa----~~y~~~~~~~~~~-------~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
..|.+.|+.| +.|+++||. +++.+.++ +.. ...++.+.|+.||.|+.+||++||++.
T Consensus 141 ~~d~~kCi~C------g~Cv~~CP~~~~~~ai~~~~~--g~~~~i~~~~~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 141 TVDRTKCLLC------GRCVNACGKNTETYAMKFLNK--NGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp EEEGGGCCCC------CHHHHHHHHHHSCCCSEEEEE--TTEEEEESGGGCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred eeCcccCcCC------CCccchhCchhcCCceeeccC--CccceecccccceechhhCCcchhHHHhhccCCcccc
Confidence 4488999997 789999997 89887653 211 245788999999999999999999875
No 61
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.75 E-value=7.9e-06 Score=90.89 Aligned_cols=57 Identities=16% Similarity=0.285 Sum_probs=47.6
Q ss_pred ecCCCCCcccCCCCCCCccccccCC---ceEEEecCCCCceeEEEecCCCccCCcccccCCC-CCeeEECc
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPA---RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPK-QNIKWTVP 377 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa---~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~-~~I~w~~p 377 (388)
..|.+.|+.| +.|+.+||. +++++.++. ....++ +.|+.||.|..+||+ +||++..-
T Consensus 947 ~id~~~C~~C------g~C~~~CP~~~~~ai~~~~~~---~~~~~~-~~C~~Cg~C~~~CP~~~Ai~~~~~ 1007 (1025)
T 1gte_A 947 VIDEEMCINC------GKCYMTCNDSGYQAIQFDPET---HLPTVT-DTCTGCTLCLSVCPIIDCIRMVSR 1007 (1025)
T ss_dssp EECTTTCCCC------CHHHHHHHHHSCSCEEECTTT---CCEEEC-TTCCCCCHHHHHCSSTTTEEEEEC
T ss_pred EEEcccCccc------CHHHHhcCccccCCEEEeCCC---ceEEeC-ccCCChhHHHhhCCCCCCEEEecC
Confidence 4588999997 799999997 898886541 257778 999999999999999 99998743
No 62
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=97.70 E-value=1.2e-05 Score=76.42 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=45.6
Q ss_pred eEecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccC----------C---cccccCCCCCeeEE
Q 016489 309 LRLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC----------K---ACDIKDPKQNIKWT 375 (388)
Q Consensus 309 l~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~C----------g---~C~~~cp~~~I~w~ 375 (388)
+.+.|.+.|+.| +.|+.+||.+++++.+. .+ +.++|..| | .|+.+||++||+|.
T Consensus 91 ~v~id~~~CigC------~~C~~~CP~~Ai~~~~~-~~------~~~kC~~C~~r~~~~~~~G~~P~Cv~~CP~~Ai~~~ 157 (274)
T 1ti6_B 91 IVLIDPEKAKGK------KELLDTCPYGVMYWNEE-EN------VAQKCTMCAHLLDDESWAPKMPRCAHNCGSFVYEFL 157 (274)
T ss_dssp CEEECTTTTTTC------GGGGGGCSSCCCEEETT-TT------EEECCCTTHHHHTCTTCTTCSCHHHHHCSSCCEEEE
T ss_pred cEEechhhccch------HHHHhhCccCCeEEEcc-cC------ccccCCCchhhhhhhccCCCCcchhhhCCcCceEEc
Confidence 345688999987 78999999999998764 12 46899999 9 99999999999985
No 63
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.63 E-value=8.7e-06 Score=74.53 Aligned_cols=57 Identities=7% Similarity=-0.136 Sum_probs=47.1
Q ss_pred CCCCCcccCCCCCCCccccccC---CceEEEecCCCCceeEEEecCCCc--cCCcccccCCCCCeeEEC
Q 016489 313 DPKIPELVNLPEYAGPESRYCP---ARVYEYVPDEKNQLKLQINAQNCL--HCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CP---a~~y~~~~~~~~~~~~~i~~~~C~--~Cg~C~~~cp~~~I~w~~ 376 (388)
++..|..|. ..+|+.+|| .+++...+. ++ .+.||.+.|+ .|+.|..+||++||++..
T Consensus 68 ~~~~C~~C~----~p~C~~~CP~~~~gAi~~~~~-~g--~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~ 129 (214)
T 1h0h_B 68 FPDQCRHCI----APPCKATADMEDESAIIHDDA-TG--CVLFTPKTKDLEDYESVISACPYDVPRKVA 129 (214)
T ss_dssp EEECCCCCS----SCHHHHHHTTTCTTSEEECTT-TC--CEEECGGGGGCSCHHHHHHHCTTCCCEECT
T ss_pred cCCcCcCcC----CchhhccCCccccccEEecCC-CC--eEEEeHHHCccccccHHHHhcCCCCeEecC
Confidence 457888884 236999999 999987642 24 6899999999 999999999999998864
No 64
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=97.53 E-value=2.8e-05 Score=78.27 Aligned_cols=40 Identities=25% Similarity=0.547 Sum_probs=36.1
Q ss_pred CccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCC
Q 016489 327 GPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQN 371 (388)
Q Consensus 327 ~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~ 371 (388)
+.|+..||.+|++++.+ ++.||.++|+.||.|+.+||+.+
T Consensus 278 ~~vv~~CPt~ai~~~~~-----~l~Id~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 278 AEVVGLCPTGCMTYESG-----TLSIDNKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp HHTTTTCTTCCEEEETT-----EEEECGGGCCCCSHHHHHCTTTE
T ss_pred hhhhccCcHHheeecCC-----EEEEccccCCchhhhHhhCcHhh
Confidence 46899999999999754 89999999999999999999855
No 65
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=97.47 E-value=4.1e-05 Score=75.14 Aligned_cols=53 Identities=19% Similarity=0.348 Sum_probs=44.4
Q ss_pred EecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 016489 310 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 375 (388)
Q Consensus 310 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg---------~C~~~cp~~~I~w~ 375 (388)
.+.|.+.|+.| +.|+.+||.+++.+... .+ +.+.|+.|+ .|+.+||++||.+.
T Consensus 177 v~id~~kCigC------g~Cv~aCP~~Ai~~~~~-~~------~~~kC~~C~~r~~~g~~paCv~~CP~~Ai~~g 238 (352)
T 2ivf_B 177 VLVDQERCKGH------RHCVEACPYKAIYFNPV-SQ------TSEKCILCYPRIEKGIANACNRQCPGRVRAFG 238 (352)
T ss_dssp EEECTTTCCCC------CHHHHHCTTCCEEEETT-TT------EEEECCTTHHHHTTTBCCHHHHTCTTCCEEEE
T ss_pred EEechhhcCCc------hHHHhhcCccceecccc-cc------cccccCCCcchhhcCCCChHHHhcCccceecc
Confidence 34588999987 78999999999998764 12 458899996 99999999999984
No 66
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=97.41 E-value=2.9e-05 Score=69.98 Aligned_cols=52 Identities=25% Similarity=0.344 Sum_probs=44.1
Q ss_pred EecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 016489 310 RLRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 375 (388)
Q Consensus 310 ~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg---------~C~~~cp~~~I~w~ 375 (388)
.+.|.+.|+.| +.|+.+||.+++++.++ . . .+.|..|+ .|+.+||++||++.
T Consensus 83 ~~id~~~CigC------~~C~~~CP~~Ai~~~~~--~--~----~~kC~~C~~~~~~g~~p~Cv~~CP~~Ai~~g 143 (195)
T 2vpz_B 83 VLVDPKKCIAC------GACIAACPYDARYLHPA--G--Y----VSKCTFCAHRLEKGKVPACVETCPTYCRTFG 143 (195)
T ss_dssp EEECTTTCCCC------CHHHHHCTTCCCEECTT--S--S----EECCCTTHHHHHTTCCCHHHHSCTTCCEEEE
T ss_pred eeecCCCCCCc------ChhHhhCCCCCeEECCC--C--C----CccCcCcchHHhCCCCchhHhhCCcccEEEe
Confidence 34588999987 78999999999998765 1 2 57899999 79999999999985
No 67
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=97.38 E-value=3.7e-05 Score=83.15 Aligned_cols=56 Identities=11% Similarity=-0.028 Sum_probs=43.1
Q ss_pred ecCCCCCcccCCCCCCCcccccc----CCceEEEecCCCCceeEEEecC----CCccCCcccccCCCCCeeEE
Q 016489 311 LRDPKIPELVNLPEYAGPESRYC----PARVYEYVPDEKNQLKLQINAQ----NCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~C----Pa~~y~~~~~~~~~~~~~i~~~----~C~~Cg~C~~~cp~~~I~w~ 375 (388)
+.|.+.|+.| +.|+++| |.+++.+... +. ...|+.. .|..||.|+.+||++||+-.
T Consensus 175 ~~d~~~CI~C------~~Cv~~C~~~~~~~~i~~~~~--g~-~~~i~~~~~~~~C~~CG~Cv~vCP~gAl~~~ 238 (783)
T 3i9v_3 175 ILDRERCIHC------KRCVRYFEEVPGDEVLDFIER--GV-HTFIGTMDFGLPSGFSGNITDICPVGALLDL 238 (783)
T ss_dssp EECTTTCCCC------CHHHHHHHHTTCCCCCEECSC--TT-SCCEECSSTTCCSTTTTTHHHHCSSSSEEEG
T ss_pred EEchhhCCCc------cHHHHHhhhhcCCceeeeecC--CC-ccEEccCCCCCCCccchhHHhhcccCceecc
Confidence 3489999997 7999999 7788887653 21 2234433 79999999999999999754
No 68
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=97.29 E-value=8.9e-05 Score=75.99 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=44.4
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg---------~C~~~cp~~~I~w~ 375 (388)
+.|.+.|+.| +.|+.+||.+++++..+. + ..+.|+.|+ .|+.+||++||.+.
T Consensus 211 ~id~~kCigC------g~Cv~~CP~~AI~~~~~~-~------~~~kC~~Cg~ri~~G~~P~Cv~~CP~~Ai~~g 271 (512)
T 1q16_B 211 LIDQDKCRGW------RMCITGCPYKKIYFNWKS-G------KSEKCIFCYPRIEAGQPTVCSETCVGRIRYLG 271 (512)
T ss_dssp EECTTTCCCC------CCHHHHCTTCCEEEETTT-T------EEEECCTTHHHHTTTCCCHHHHTCTTCCEEEE
T ss_pred EECHHHCCCc------hHHHhhCCccceecccCC-C------CcccCcCCCchhhcCCCCceEeeCchhhhhcc
Confidence 4588999997 789999999999987641 2 368899999 99999999999875
No 69
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=97.27 E-value=3.4e-05 Score=70.58 Aligned_cols=52 Identities=25% Similarity=0.409 Sum_probs=43.5
Q ss_pred ecCCCCCc--ccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccC------C---cccccCCCCCeeEE
Q 016489 311 LRDPKIPE--LVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHC------K---ACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~--~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~C------g---~C~~~cp~~~I~w~ 375 (388)
+.|.+.|+ .| +.|+.+||.+++++.++ .+ +.+.|..| | .|+.+||++||++.
T Consensus 102 ~id~~~C~~~~C------~~C~~~CP~~Ai~~~~~-~~------~~~kC~~C~~~~~~G~~p~Cv~~CP~~Ai~~~ 164 (214)
T 1h0h_B 102 LFTPKTKDLEDY------ESVISACPYDVPRKVAE-SN------QMAKCDMCIDRITNGLRPACVTSCPTGAMNFG 164 (214)
T ss_dssp EECGGGGGCSCH------HHHHHHCTTCCCEECTT-SS------CEECCCTTHHHHTTTCCCHHHHHCSSSCEEEE
T ss_pred EEeHHHCccccc------cHHHHhcCCCCeEecCC-Cc------ccCcCCCCcchhhcCCChhHHHhcCcccEEEc
Confidence 45788999 87 78999999999998754 11 46889999 6 99999999999975
No 70
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=97.16 E-value=7.8e-05 Score=71.45 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=43.1
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEecCCCCceeEEEecCCCccCC---------cccccCCCCCeeEE
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCK---------ACDIKDPKQNIKWT 375 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg---------~C~~~cp~~~I~w~ 375 (388)
+.|.+.|+.| +.|+.+||.+++++.+. ++ ....|..|+ .|+..||++||.+.
T Consensus 127 ~id~~~CigC------g~C~~~CP~~ai~~~~~-~~------~~~kC~~C~~r~~~g~~p~Cv~~CP~~Ai~~~ 187 (294)
T 1kqf_B 127 DFQSENCIGC------GYCIAGCPFNIPRLNKE-DN------RVYKCTLCVDRVSVGQEPACVKTCPTGAIHFG 187 (294)
T ss_dssp EECGGGCCCC------CHHHHHCTTCCCEEETT-TT------EEECCCTTHHHHTTTCCCHHHHHCTTSCEEEE
T ss_pred EeCcccCCCc------chhhhcCCCCCcEecCC-CC------CeeeCCCccchhhcCccHHHHHhCCcCcEEEe
Confidence 4578999987 78999999999998764 22 235899998 99999999999875
No 71
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.11 E-value=0.00032 Score=61.96 Aligned_cols=37 Identities=22% Similarity=-0.043 Sum_probs=33.4
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+|++|+|||+ .+.||+.||.||+.||++|.++|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999984 4789999999999999999999976
No 72
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.03 E-value=0.002 Score=62.29 Aligned_cols=153 Identities=14% Similarity=0.059 Sum_probs=81.1
Q ss_pred eeeecCeEEEecEEEecccCCCc-cchhHHHhcCCCcccCCCCc-eEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCc
Q 016489 11 ENFQRGVELRGRITLLAEGCRGS-LSEKLIKNFKLREKSHAQHQ-TYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTY 88 (388)
Q Consensus 11 ~~~~~g~~i~Ak~vI~AdG~~s~-lar~l~~~~gl~~~~~~~~~-~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~ 88 (388)
.+.+.+.+++|+.||+|+|..+. |.+ .+++.. ...+. .+.+. .+.+.... ...+ + .
T Consensus 198 ~v~~~~g~~~a~~vV~A~G~~s~~l~~----~~~~~~--~~~~~~g~~~~----~~~~~~~~--~~~~-~---------~ 255 (382)
T 1ryi_A 198 FIKTPSGDVWANHVVVASGVWSGMFFK----QLGLNN--AFLPVKGECLS----VWNDDIPL--TKTL-Y---------H 255 (382)
T ss_dssp EEEETTEEEEEEEEEECCGGGTHHHHH----HTTCCC--CCEEEEEEEEE----EECCSSCC--CSEE-E---------E
T ss_pred EEEcCCceEEcCEEEECCChhHHHHHH----hcCCCC--ceeccceEEEE----ECCCCCCc--cceE-E---------c
Confidence 34444558999999999999875 444 456541 11111 11111 12221111 1111 1 1
Q ss_pred ceeEEEEcCCCEEEEEEEEecCCCCCCCCh---HHHHHHHH-cCCCcccccCCCeeeeecceeeccCCCcCCCccccCCE
Q 016489 89 GGSFLYHMNDRQIALGLVVALNYHNPFLNP---YEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPGG 164 (388)
Q Consensus 89 Gggwiy~~~~~~vsVGlv~~l~~~~~~~~~---~~~~~~~k-~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g~ 164 (388)
.+.|++|..++.+.||.....+..+...+. ..+++.++ ..|.+ .+.+.+..-+. +. ....++.
T Consensus 256 ~~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~~~~~~~w~g------~~---~~t~d~~ 322 (382)
T 1ryi_A 256 DHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAI----QNMKVDRFWAG------LR---PGTKDGK 322 (382)
T ss_dssp TTEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGG----GGSEEEEEEEE------EE---EECSSSC
T ss_pred CCEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCc----CCCceeeEEEE------ec---ccCCCCC
Confidence 247999988888988875332211122222 23344443 23433 22233221111 11 1234666
Q ss_pred EEEccCc---cc--cCCCCccchHHHHHHHHHHHHHHHH
Q 016489 165 AIIGCAA---GF--LNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 165 lLvGDAA---G~--vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
.++|++. ++ ..++.+.|+..|..+|+++|+.|..
T Consensus 323 p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 323 PYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp CEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred cEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 7788764 33 4678899999999999999998753
No 73
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=97.02 E-value=0.00024 Score=74.71 Aligned_cols=62 Identities=19% Similarity=0.204 Sum_probs=46.0
Q ss_pred CCeEecCCCCCcccCCCCCC-CccccccCC-----ceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeE
Q 016489 307 AHLRLRDPKIPELVNLPEYA-GPESRYCPA-----RVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 307 ~Hl~v~d~~~c~~~~~~~~~-~~c~~~CPa-----~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w 374 (388)
-+|-|.|.+.|.-..+ . .-|.++||. .|+++.++ ++ +..|..+.|+.||.|..+||+.+|+-
T Consensus 19 ~~~~~~~~~~c~p~~c---~~~~c~~~cp~~~~~~~~~~~~~~-~~--~~~i~e~~c~gc~~~~~~~p~~~i~i 86 (607)
T 3bk7_A 19 MRIAVIDYDKCNPDKC---GHFLCERVCPVNRMGGEAIIIDEE-NY--KPIIQEASCTGCGICVHKCPFNAISI 86 (607)
T ss_dssp EEEEECCGGGCCTTTS---SSCHHHHHCHHHHTTCCSEEEETT-TT--EEEECTTTCCCCCHHHHHCSSCCCEE
T ss_pred ceEEEeeccccCCCCC---ChhhHhhhCCCCcCCceEEEEcCC-CC--cceeeecccCccccccCCCCcceEEE
Confidence 3455666666653221 1 369999995 47888765 23 79999999999999999999998875
No 74
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=96.98 E-value=0.0002 Score=67.60 Aligned_cols=45 Identities=20% Similarity=0.332 Sum_probs=37.6
Q ss_pred CCccccccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 326 AGPESRYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 326 ~~~c~~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
|+.|+..||.+++.++++ ..+.+|..+|+.|+.|..+|| +||+..
T Consensus 176 C~~C~~~CP~g~I~id~~----~~v~~d~~~C~~C~~C~~vCp-~aI~~~ 220 (265)
T 2pa8_D 176 CEKAVNVCPEGVFELKDG----KLSVKNELSCTLCEECLRYCN-GSIRIS 220 (265)
T ss_dssp CTTHHHHCTTCCEEEETT----EEEESCGGGCCCCCHHHHHHT-TSEEEE
T ss_pred HHHHHHhCcccCeEecCC----eeEEeccccCCCchHHHHhCC-CceEEE
Confidence 478999999999999764 135678899999999999999 898643
No 75
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.70 E-value=0.05 Score=51.19 Aligned_cols=36 Identities=22% Similarity=-0.067 Sum_probs=32.0
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+|+.|+|||+. +.||+.|+.||..+|+.|.+.++.
T Consensus 294 ~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 294 DLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 489999999995 459999999999999999988764
No 76
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.0012 Score=63.06 Aligned_cols=42 Identities=19% Similarity=0.048 Sum_probs=36.0
Q ss_pred ccCCEEEEccCccccCCCCccch--HHHHHHHHHHHHHHHHhhc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGT--HTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi--~~Am~SG~lAAeai~~al~ 201 (388)
.-||++++||||++++++...|. .-+|.||+.|||+|.+.|.
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 46899999999999999888882 3367899999999999875
No 77
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=96.26 E-value=0.0025 Score=48.58 Aligned_cols=25 Identities=20% Similarity=0.602 Sum_probs=22.6
Q ss_pred EEecCCCccCCcccccCCCCCeeEE
Q 016489 351 QINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.++.++|++||.|..+||+++|++.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQG 26 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEEC
T ss_pred eEeCCCCcCccchHHHCChhheEcC
Confidence 4788999999999999999999873
No 78
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=96.25 E-value=0.0031 Score=44.16 Aligned_cols=26 Identities=19% Similarity=0.549 Sum_probs=22.7
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.+|.++|++||.|..+|| .+|.+.
T Consensus 1 ~i~i~~~~C~~C~~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 1 TIVIDHEECIGCESCVELCP-EVFAMI 26 (59)
T ss_dssp CEEESSCCCSSCCGGGGTST-TTEEEE
T ss_pred CeEEChhhCcChhHHHHHCC-HHheec
Confidence 36889999999999999999 588773
No 79
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=96.17 E-value=0.0019 Score=51.23 Aligned_cols=28 Identities=14% Similarity=0.329 Sum_probs=26.0
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEEC
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~~ 376 (388)
.+.+|.++|++||.|..+||.++|++..
T Consensus 37 ~~~id~~~C~~Cg~C~~~CP~~ai~~~~ 64 (103)
T 1xer_A 37 IVGVDFDLCIADGSCINACPVNVFQWYD 64 (103)
T ss_dssp SEEEETTTCCCCCHHHHHCTTCCCEEEE
T ss_pred eEEEehhhCCChhhHHHHcCccCeeccc
Confidence 6899999999999999999999998864
No 80
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.03 E-value=0.0017 Score=46.73 Aligned_cols=26 Identities=19% Similarity=0.604 Sum_probs=23.4
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.+|.++|++||.|..+|| ++|++.
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEEC
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEc
Confidence 57899999999999999999 898764
No 81
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=95.98 E-value=0.0028 Score=47.49 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=24.8
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEEC
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~~ 376 (388)
.+.++.++|++||.|..+||+++|++..
T Consensus 2 ~~~~~~~~C~~Cg~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 2 HTVKIYDTCIGCTQCVRACPTDVLEMVP 29 (80)
T ss_dssp CEEEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred CCcccCCcCcChhHHHHHCCcccccccc
Confidence 4678899999999999999999998764
No 82
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=95.95 E-value=0.0034 Score=48.09 Aligned_cols=25 Identities=20% Similarity=0.660 Sum_probs=22.2
Q ss_pred EEecCCCccCCcccccCCCCCeeEE
Q 016489 351 QINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.++.++|++||.|..+||++||.+.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMG 26 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECC
T ss_pred EEeCCcCcChhHHHHHCchhccCcC
Confidence 3678999999999999999999864
No 83
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=95.84 E-value=0.0031 Score=47.79 Aligned_cols=26 Identities=19% Similarity=0.613 Sum_probs=23.5
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.||.++|++||.|..+|| +++++.
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 68999999999999999999 787764
No 84
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=95.82 E-value=0.0035 Score=47.60 Aligned_cols=24 Identities=21% Similarity=0.603 Sum_probs=21.8
Q ss_pred EecCCCccCCcccccCCCCCeeEE
Q 016489 352 INAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 352 i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.+.|++||.|..+||++||.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEEC
T ss_pred eeCCCCCChhhHHHHCChhccCCC
Confidence 577999999999999999999874
No 85
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=95.79 E-value=0.0038 Score=44.76 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=23.4
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.+|.++|++||.|..+||. +|++.
T Consensus 3 ~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 3 KVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred EEEECcccCcCchHHHHhCCc-eEEEC
Confidence 688999999999999999995 88774
No 86
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=95.75 E-value=0.0032 Score=47.58 Aligned_cols=24 Identities=25% Similarity=0.484 Sum_probs=21.6
Q ss_pred EecCCCccCCcccccCCCCCeeEE
Q 016489 352 INAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 352 i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
++.++|++||.|..+||++||.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECC
T ss_pred EeCCCCcChhhHHHHcChhccCcC
Confidence 567899999999999999999864
No 87
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=95.70 E-value=0.0058 Score=42.53 Aligned_cols=25 Identities=28% Similarity=0.615 Sum_probs=21.7
Q ss_pred EEEecCCCccCCcccccCCCCCeeEE
Q 016489 350 LQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 350 ~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
+.| .++|++||.|..+||.++|++.
T Consensus 2 ~~i-~~~C~~C~~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCGACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCCTTGGGCTTCCEECC
T ss_pred eEe-cccCcChhhHHHHCCccccCcC
Confidence 455 7899999999999999998754
No 88
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.33 E-value=0.12 Score=49.93 Aligned_cols=160 Identities=12% Similarity=0.044 Sum_probs=80.8
Q ss_pred CeeeeeeecCeEEEecEEEecccCCC-ccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCC
Q 016489 7 GSKKENFQRGVELRGRITLLAEGCRG-SLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQ 85 (388)
Q Consensus 7 G~~~~~~~~g~~i~Ak~vI~AdG~~s-~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~ 85 (388)
+++..+.+.+.+++|+.||+|+|..+ .|.+ .+|+.. ...+..-.+-+.+ ..+ ... .. ++..
T Consensus 205 ~~~~~v~~~~g~~~a~~vV~a~G~~s~~l~~----~~g~~~--~~~~~~~~~~~~~--~~~-~~~-~~-~~~~------- 266 (405)
T 2gag_B 205 EKVTGVKTTRGTIHAGKVALAGAGHSSVLAE----MAGFEL--PIQSHPLQALVSE--LFE-PVH-PT-VVMS------- 266 (405)
T ss_dssp SBEEEEEETTCCEEEEEEEECCGGGHHHHHH----HHTCCC--CEEEEEEEEEEEE--EBC-SCC-CS-EEEE-------
T ss_pred CEEEEEEeCCceEECCEEEECCchhHHHHHH----HcCCCC--CccccceeEEEec--CCc-ccc-Cc-eEEe-------
Confidence 44455544444899999999999987 3443 356651 1111100010111 111 111 11 2211
Q ss_pred CCcceeEEEEcCCCEEEEEEEEec-CCCCCCCCh---HHHHHHHH-cCCCcccccCCCeeeeecceeeccCCCcCCCccc
Q 016489 86 KTYGGSFLYHMNDRQIALGLVVAL-NYHNPFLNP---YEEFQKFK-HHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPV 160 (388)
Q Consensus 86 ~~~Gggwiy~~~~~~vsVGlv~~l-~~~~~~~~~---~~~~~~~k-~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~ 160 (388)
..++.|+.|..++.+.||..... +-.....++ .++++.+. ..|.+ .+.+.+..-+ |+. ...
T Consensus 267 -~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~~~~~~~w~------g~~---~~t 332 (405)
T 2gag_B 267 -NHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIF----ARAHVLRTWG------GIV---DTT 332 (405)
T ss_dssp -TTTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGG----GGCEECEEEE------EEE---EEE
T ss_pred -CCCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCcc----ccCCcceEEe------ecc---ccC
Confidence 11345777877788989876542 111111221 22333333 23433 2333322111 111 223
Q ss_pred cCCEEEEccCc--ccc--CCCCccchHHHHHHHHHHHHHHHH
Q 016489 161 FPGGAIIGCAA--GFL--NVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 161 ~~g~lLvGDAA--G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
.++..+||++. +++ ..+.+.|+..|...|.++|+.|..
T Consensus 333 ~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 333 MDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp TTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred CCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 56777888864 433 335678999999999999998864
No 89
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=95.12 E-value=0.0064 Score=42.64 Aligned_cols=25 Identities=24% Similarity=0.693 Sum_probs=21.5
Q ss_pred eEEEecCCCccCCcccccCCCCCeeE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w 374 (388)
++.+|.++|++||.|..+||. +|.+
T Consensus 2 ~~~i~~~~C~~C~~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 2 KVRVDADACIGCGVCENLCPD-VFQL 26 (60)
T ss_dssp CSEECTTTCCSCCSSTTTCTT-TBCC
T ss_pred EEEEchhhCCCChHHHHhCcH-HHeE
Confidence 467899999999999999996 7654
No 90
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=95.00 E-value=0.013 Score=43.72 Aligned_cols=25 Identities=16% Similarity=0.210 Sum_probs=22.4
Q ss_pred EEecCCCcc--CCcccccCCCCCeeEE
Q 016489 351 QINAQNCLH--CKACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~--Cg~C~~~cp~~~I~w~ 375 (388)
.++.++|++ ||.|..+||+++|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcchhHHhcccccEEeC
Confidence 467899999 9999999999999874
No 91
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=94.87 E-value=0.0019 Score=59.46 Aligned_cols=55 Identities=20% Similarity=0.169 Sum_probs=36.5
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEE----e-----------cCC-C-C-ceeEE-----EecCCCccCCcccccC
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEY----V-----------PDE-K-N-QLKLQ-----INAQNCLHCKACDIKD 367 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~----~-----------~~~-~-~-~~~~~-----i~~~~C~~Cg~C~~~c 367 (388)
+.+.+.|+.| +.|+.+||...... . .+. + . ..++. .+...|+.||.|..+|
T Consensus 143 ~~~~~~Ci~C------g~C~~~CP~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vC 216 (238)
T 2wdq_B 143 LDGLYECILC------ACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVC 216 (238)
T ss_dssp TTTTTTCCCC------CTTGGGCHHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHC
T ss_pred Hhcccccccc------CCchhhCcCCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccCCCCcCcccchhhhhc
Confidence 3467899997 79999999875311 0 010 0 0 00110 2568999999999999
Q ss_pred CCCC
Q 016489 368 PKQN 371 (388)
Q Consensus 368 p~~~ 371 (388)
|.++
T Consensus 217 P~gi 220 (238)
T 2wdq_B 217 PKGL 220 (238)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 9886
No 92
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=94.84 E-value=0.0043 Score=43.52 Aligned_cols=23 Identities=26% Similarity=0.736 Sum_probs=20.2
Q ss_pred EEEecCCCccCCcccccCCCCCeeE
Q 016489 350 LQINAQNCLHCKACDIKDPKQNIKW 374 (388)
Q Consensus 350 ~~i~~~~C~~Cg~C~~~cp~~~I~w 374 (388)
+.+| ++|++||.|..+||+ +|.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTT-TEEE
T ss_pred cEEC-CcCccchHHHHhCCc-cEEE
Confidence 5678 999999999999998 7765
No 93
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=94.35 E-value=0.012 Score=44.05 Aligned_cols=25 Identities=16% Similarity=0.235 Sum_probs=22.6
Q ss_pred EEecCCCcc--CCcccccCCCCCeeEE
Q 016489 351 QINAQNCLH--CKACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~--Cg~C~~~cp~~~I~w~ 375 (388)
.|+.++|++ ||.|..+||.++|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcC
Confidence 478899999 9999999999999874
No 94
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=94.24 E-value=0.013 Score=46.71 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=22.5
Q ss_pred EEecCCCccCC--cccccCCCCCeeEE
Q 016489 351 QINAQNCLHCK--ACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~Cg--~C~~~cp~~~I~w~ 375 (388)
.++.++|++|| .|..+||+++|++.
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred eECccccCCccCcHHHHHcCccceEcC
Confidence 47889999999 99999999999874
No 95
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=94.11 E-value=0.014 Score=50.84 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=21.1
Q ss_pred ecCCCccCCcccccCCCCCeeEEC
Q 016489 353 NAQNCLHCKACDIKDPKQNIKWTV 376 (388)
Q Consensus 353 ~~~~C~~Cg~C~~~cp~~~I~w~~ 376 (388)
|.++|++|+.|..+||+++|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~ 72 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEP 72 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEE
T ss_pred CCccCcccccchhhCCcccEEeec
Confidence 467999999999999999998653
No 96
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=93.82 E-value=0.0031 Score=58.24 Aligned_cols=54 Identities=15% Similarity=0.111 Sum_probs=35.8
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEE---Ee------------cC-CCC-ceeE-E----EecCCCccCCcccccCCC
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYE---YV------------PD-EKN-QLKL-Q----INAQNCLHCKACDIKDPK 369 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~---~~------------~~-~~~-~~~~-~----i~~~~C~~Cg~C~~~cp~ 369 (388)
.|.+.|+.| +.|+++||..++. +. +. +.+ ..++ . .+...|+.||.|..+||+
T Consensus 143 ~~~~~Ci~C------g~C~~~CP~~~~~~~~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 216 (243)
T 1kf6_B 143 HQFSGCINC------GLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 216 (243)
T ss_dssp GGGGCCCCC------CHHHHHCHHHHHCTTSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhcccc------CccccccCCCcccCCCCCHHHHHHHHHHhhCccccchHHHHHHHhccCCcccCcccCCcchhCCC
Confidence 567889987 7999999987642 00 10 000 0011 1 245789999999999998
Q ss_pred CC
Q 016489 370 QN 371 (388)
Q Consensus 370 ~~ 371 (388)
+.
T Consensus 217 gi 218 (243)
T 1kf6_B 217 HV 218 (243)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 97
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=93.58 E-value=0.021 Score=45.32 Aligned_cols=25 Identities=28% Similarity=0.343 Sum_probs=22.4
Q ss_pred EEecCCCccC--CcccccCCCCCeeEE
Q 016489 351 QINAQNCLHC--KACDIKDPKQNIKWT 375 (388)
Q Consensus 351 ~i~~~~C~~C--g~C~~~cp~~~I~w~ 375 (388)
.|+.++|++| |.|..+||+++|.+.
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~ 28 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEG 28 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEecccCCCCCcChhhhhcCccccCcC
Confidence 5788999988 999999999999864
No 98
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=93.33 E-value=0.02 Score=64.70 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=31.6
Q ss_pred cccCCceEEEecCCCCceeEEEecCCCccCCcccccCCCCCeeEE
Q 016489 331 RYCPARVYEYVPDEKNQLKLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 331 ~~CPa~~y~~~~~~~~~~~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
-.||.+...+....-......+|.++|++||.|..+||+++|+..
T Consensus 662 G~~p~G~~~~~k~~i~~~~p~~d~~kCi~Cg~Cv~vCP~~AI~~~ 706 (1231)
T 2c42_A 662 GRFPLGTSQFEKRGVAINVPQWVPENCIQCNQCAFVCPHSAILPV 706 (1231)
T ss_dssp CCBCTTGGGGTCCCCCSEEEEECTTTCCCCCHHHHHCSSCCEEEE
T ss_pred CcccCCcccccccCCCccceEEeCccCCchhhHHHhCCccccccc
Confidence 467776532211100112578999999999999999999999874
No 99
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.26 E-value=1 Score=43.02 Aligned_cols=37 Identities=19% Similarity=0.064 Sum_probs=26.3
Q ss_pred CCEEEEccCc---ccc--CCCCccchHHHHHHHHHHHHHHHH
Q 016489 162 PGGAIIGCAA---GFL--NVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 162 ~g~lLvGDAA---G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
|+.-+||... +++ ..+.+.|+..|..+|+++|+.|..
T Consensus 313 d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 313 DSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp TSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 4555666654 222 346788999999999999998865
No 100
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=92.73 E-value=0.014 Score=54.34 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=34.9
Q ss_pred cCCCCCcccCCCCCCCccccccCCceEE----E-----------ecCC-C-C-cee--EE---EecCCCccCCcccccCC
Q 016489 312 RDPKIPELVNLPEYAGPESRYCPARVYE----Y-----------VPDE-K-N-QLK--LQ---INAQNCLHCKACDIKDP 368 (388)
Q Consensus 312 ~d~~~c~~~~~~~~~~~c~~~CPa~~y~----~-----------~~~~-~-~-~~~--~~---i~~~~C~~Cg~C~~~cp 368 (388)
.+.+.|+.| +.|+.+||..... + ..+. + . ..+ .. ....+|+.||.|..+||
T Consensus 153 ~~~~~Ci~C------G~C~~~CP~~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~~~~~C~~Cg~C~~~CP 226 (252)
T 2h88_B 153 DGLYECILC------ACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCP 226 (252)
T ss_dssp TTTTTCCCC------CTTGGGCHHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCT
T ss_pred HhHHhchhh------CcchhhCCCCccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhcccCCCcCccccchhhhcC
Confidence 456789997 7999999987521 1 0110 0 0 001 11 13479999999999999
Q ss_pred CCC
Q 016489 369 KQN 371 (388)
Q Consensus 369 ~~~ 371 (388)
.+.
T Consensus 227 ~~i 229 (252)
T 2h88_B 227 KGL 229 (252)
T ss_dssp TCC
T ss_pred CCC
Confidence 874
No 101
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=92.54 E-value=0.034 Score=55.68 Aligned_cols=27 Identities=26% Similarity=0.520 Sum_probs=24.9
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.+.+|.++|++||.|..+||.+||...
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~ 53 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGE 53 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCC
T ss_pred eEEECcccCCCccHHHHhcCcCceecc
Confidence 689999999999999999999999754
No 102
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=91.96 E-value=0.0079 Score=65.07 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=36.3
Q ss_pred CCCCCcccCCCCCCCccccccCCceEEEec---CCCCc-eeEEEecCCCccCCcccccCCCCCee
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYEYVP---DEKNQ-LKLQINAQNCLHCKACDIKDPKQNIK 373 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~---~~~~~-~~~~i~~~~C~~Cg~C~~~cp~~~I~ 373 (388)
+.+.|+.| +.|+.+||..+..... ...|. ..+..+...|+.||.|..+||++++.
T Consensus 413 ~~~~Ci~C------G~C~~~CP~~~~~~~il~~~~~G~~~~~~~~~~~Ci~Cg~C~~vCP~ga~~ 471 (807)
T 3cf4_A 413 MVAKCADC------GACLLACPEEIDIPEAMGFAKKGDFSYFEEIHDTCIGCRRCEQVCKKEIPI 471 (807)
T ss_dssp HHHHCCCC------CHHHHHCTTCCCHHHHHHHHHTTCTHHHHHHHHHCCCCCHHHHHCTTCCCH
T ss_pred hHHhCCCC------CchhhhCCCCCchHHHHHHHHcCChhhhhhchhhccchhhHHHhCCCCCCh
Confidence 45678886 7999999997621000 00010 01334568899999999999998853
No 103
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.92 E-value=0.5 Score=44.85 Aligned_cols=159 Identities=15% Similarity=0.007 Sum_probs=74.9
Q ss_pred eeeeecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCc-EEEEcCCCCCCCCc
Q 016489 10 KENFQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGE-ILHTLGWPLDQKTY 88 (388)
Q Consensus 10 ~~~~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~-v~~~~G~p~~~~~~ 88 (388)
+.+.+.+.+++|+.||.|+|..| ..|.+.+|+.. ....+.. +.-+ .+..++....... .+... .
T Consensus 187 ~~V~t~~g~i~a~~VV~A~G~~s---~~l~~~~g~~~-~~~~p~r-g~~~--~~~~~~~~~~~~~p~~~~~--------~ 251 (381)
T 3nyc_A 187 WEVRCDAGSYRAAVLVNAAGAWC---DAIAGLAGVRP-LGLQPKR-RSAF--IFAPPPGIDCHDWPMLVSL--------D 251 (381)
T ss_dssp EEEECSSEEEEESEEEECCGGGH---HHHHHHHTCCC-CCCEEEE-EEEE--EECCCTTCCCTTCCEEEET--------T
T ss_pred EEEEeCCCEEEcCEEEECCChhH---HHHHHHhCCCC-CceeeeE-EEEE--EECCCcCCCcCccceEEeC--------C
Confidence 44555556999999999999986 33444456641 0111111 1111 1222221111111 11111 1
Q ss_pred ceeEEEEcCCCEEEEEEEEecC--CCCCCCCh---HHHHHHHHcCCCcccccCCCeeeeecceeeccCCCcCCCccccCC
Q 016489 89 GGSFLYHMNDRQIALGLVVALN--YHNPFLNP---YEEFQKFKHHPAIKPLLEGGTVVQYGARTLNEGGLQSIPYPVFPG 163 (388)
Q Consensus 89 Gggwiy~~~~~~vsVGlv~~l~--~~~~~~~~---~~~~~~~k~~P~i~~~l~~~~~~~yga~~ip~gg~~~~p~~~~~g 163 (388)
++.|+.|.. +.+-||-..... -.+...+. .+.++.+...|. +.+.+.+..-+... ....|+
T Consensus 252 ~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~w~G~r---------~~t~D~ 317 (381)
T 3nyc_A 252 ESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATT----LTIRRPEHTWAGLR---------SFVADG 317 (381)
T ss_dssp SSCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHHHBS----CCCCCCSEEEEEEE---------EECTTS
T ss_pred CCEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHhcCC----CcccceeeeeEEcc---------ccCCCC
Confidence 234677776 677776432211 01111221 234444443332 22223222111111 223455
Q ss_pred EEEEccCcc---cc--CCCCccchHHHHHHHHHHHHHHH
Q 016489 164 GAIIGCAAG---FL--NVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 164 ~lLvGDAAG---~v--dp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
.-+||...+ ++ .-+.+.|+..|..+|++.|+.|.
T Consensus 318 ~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 318 DLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIR 356 (381)
T ss_dssp CCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHHT
T ss_pred CceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHHh
Confidence 566676542 22 23567899999999999998774
No 104
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=90.11 E-value=0.026 Score=51.90 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=34.7
Q ss_pred CCCCCcccCCCCCCCccccccCCceEE--E-e-----------cC---CCCc-ee---E--EEecCCCccCCcccccCCC
Q 016489 313 DPKIPELVNLPEYAGPESRYCPARVYE--Y-V-----------PD---EKNQ-LK---L--QINAQNCLHCKACDIKDPK 369 (388)
Q Consensus 313 d~~~c~~~~~~~~~~~c~~~CPa~~y~--~-~-----------~~---~~~~-~~---~--~i~~~~C~~Cg~C~~~cp~ 369 (388)
+.+.|+.| +.|+.+||..++. + . .+ +... .+ + .....+|+.||.|..+||.
T Consensus 147 ~~~~Ci~C------g~C~~~CP~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~C~~Cg~C~~vCP~ 220 (241)
T 2bs2_B 147 ELDRCIEC------GCCIAACGTKIMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPK 220 (241)
T ss_dssp HHHTCCCC------CHHHHTCHHHHHCTTCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTTTGGGCCCCCHHHHHCTT
T ss_pred hhhhhhcc------CcCcccCCCCccCCCCCCHHHHHHHHHHhhCccccccHHHHHHHHhcccCcccCcccChhhHhcCC
Confidence 45789987 7999999998642 1 0 00 0000 00 0 2345789999999999997
Q ss_pred CC
Q 016489 370 QN 371 (388)
Q Consensus 370 ~~ 371 (388)
+.
T Consensus 221 ~i 222 (241)
T 2bs2_B 221 NL 222 (241)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 105
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=88.87 E-value=3.8 Score=39.65 Aligned_cols=34 Identities=12% Similarity=-0.005 Sum_probs=26.7
Q ss_pred CCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 162 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+++.++|.+....-+-+ |+-|+.||..||+.|..
T Consensus 391 g~~~fAGe~t~~~~~g~---~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 391 GRIHFVGSDVSLEFPGY---IEGALETAECAVNAILH 424 (431)
T ss_dssp TTEEECSGGGCSSSTTS---HHHHHHHHHHHHHHHHH
T ss_pred CcEEEEehhhhccCCeE---ehHHHHHHHHHHHHHHh
Confidence 48999997666544444 66799999999998875
No 106
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=87.97 E-value=0.1 Score=49.40 Aligned_cols=17 Identities=29% Similarity=0.499 Sum_probs=15.0
Q ss_pred cCCCccCCcccccCCCC
Q 016489 354 AQNCLHCKACDIKDPKQ 370 (388)
Q Consensus 354 ~~~C~~Cg~C~~~cp~~ 370 (388)
-..|..||.|..+||.+
T Consensus 236 l~~C~~Cg~C~~vCP~g 252 (282)
T 3vr8_B 236 AFKCHTIMNCTKTCPKH 252 (282)
T ss_pred cccChhhCCccccCcCC
Confidence 46899999999999965
No 107
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.88 E-value=1.4 Score=46.29 Aligned_cols=23 Identities=13% Similarity=-0.044 Sum_probs=18.3
Q ss_pred CCCCccchHHHHHHHHHHHHHHH
Q 016489 175 NVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 175 dp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
..+.+.|+..|..+|++.|+.|.
T Consensus 621 ~G~g~~Gl~~Ap~~ae~lA~~i~ 643 (676)
T 3ps9_A 621 AALGSRGLCSAPLCAEILAAQMS 643 (676)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHHT
T ss_pred ecccccHHHHHHHHHHHHHHHHc
Confidence 34677899999998888888774
No 108
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=86.06 E-value=5.3 Score=37.82 Aligned_cols=38 Identities=11% Similarity=0.025 Sum_probs=26.0
Q ss_pred cCCEEEEccCc---ccc--CCCCccchHHHHHHHHHHHHHHHH
Q 016489 161 FPGGAIIGCAA---GFL--NVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 161 ~~g~lLvGDAA---G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
.|+.-+||... +++ .-+.+.|+..|..+|+++|+.|..
T Consensus 321 ~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~ 363 (389)
T 2gf3_A 321 LDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALT 363 (389)
T ss_dssp TTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHHH
T ss_pred CCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHcC
Confidence 34555666642 222 235678999999999999998764
No 109
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=85.44 E-value=2 Score=45.14 Aligned_cols=23 Identities=17% Similarity=0.043 Sum_probs=17.9
Q ss_pred CCCCccchHHHHHHHHHHHHHHH
Q 016489 175 NVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 175 dp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
..+.+.|+..|..+|++.|+.|.
T Consensus 625 ~G~g~~Gl~~ap~~ae~lA~~i~ 647 (689)
T 3pvc_A 625 GGLGSRGLCSAPLVAEILAAQMF 647 (689)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHHT
T ss_pred hcccccHHHHHHHHHHHHHHHHc
Confidence 34667899999988888887763
No 110
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=83.79 E-value=0.19 Score=52.16 Aligned_cols=27 Identities=26% Similarity=0.529 Sum_probs=24.7
Q ss_pred eEEEecCCCccCCcccccCCC----CCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPK----QNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~----~~I~w~ 375 (388)
.+.+|.++|++||.|+.+||. ++|...
T Consensus 139 ~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~ 169 (574)
T 3c8y_A 139 SLTVDRTKCLLCGRCVNACGKNTETYAMKFL 169 (574)
T ss_dssp SEEEEGGGCCCCCHHHHHHHHHHSCCCSEEE
T ss_pred cceeCcccCcCCCCccchhCchhcCCceeec
Confidence 799999999999999999998 898764
No 111
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.84 E-value=0.26 Score=54.60 Aligned_cols=29 Identities=21% Similarity=0.529 Sum_probs=25.4
Q ss_pred eeEEEecCCCccCCcccccCCC---CCeeEEC
Q 016489 348 LKLQINAQNCLHCKACDIKDPK---QNIKWTV 376 (388)
Q Consensus 348 ~~~~i~~~~C~~Cg~C~~~cp~---~~I~w~~ 376 (388)
..+.+|.++|+.||.|..+||. ++|++..
T Consensus 944 ~~~~id~~~C~~Cg~C~~~CP~~~~~ai~~~~ 975 (1025)
T 1gte_A 944 VVAVIDEEMCINCGKCYMTCNDSGYQAIQFDP 975 (1025)
T ss_dssp EEEEECTTTCCCCCHHHHHHHHHSCSCEEECT
T ss_pred ceEEEEcccCcccCHHHHhcCccccCCEEEeC
Confidence 3688999999999999999995 9998753
No 112
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=82.45 E-value=14 Score=37.80 Aligned_cols=167 Identities=12% Similarity=0.094 Sum_probs=76.4
Q ss_pred eEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEEEEEecCCCCCCCCcEEEEcCCCCCCCCcc-eeEEEE
Q 016489 17 VELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIKEVWEIDEGKHNPGEILHTLGWPLDQKTYG-GSFLYH 95 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvke~~~~~~~~~~~g~v~~~~G~p~~~~~~G-ggwiy~ 95 (388)
.+++||.||.|+|+.+ .++.+.+|... ..+-...-|. ++-++.........+.+ ..+ . .| .-|+.|
T Consensus 217 ~~i~A~~VV~AaG~~s---~~l~~~~g~~~---~~~v~p~kG~--~lvl~~~~~~~~~~~~~-~~~-~---dgr~v~~iP 283 (561)
T 3da1_A 217 HTIYAKKVVNAAGPWV---DTLREKDRSKH---GKYLKLSKGV--HLVVDQSRFPLRQAVYF-DTE-S---DGRMIFAIP 283 (561)
T ss_dssp EEEEEEEEEECCGGGH---HHHHHTTTCCC---SSEEEEEEEE--EEEEEGGGSCCSSEEEE-CCS-S---SCCCEEEEE
T ss_pred EEEECCEEEECCCcch---HHHHHhcCCCC---CceEEeccEE--EEEECCccCCCceEEEe-ccC-C---CCcEEEEEe
Confidence 5799999999999975 33433455541 1111111221 22233222112222222 111 1 12 247778
Q ss_pred cCCCEEEEEEEEec---CCCCCCCChHH---HHHHHH-cCCCcccccCCCeeee--ecceeeccCCCcCCCccccCCEEE
Q 016489 96 MNDRQIALGLVVAL---NYHNPFLNPYE---EFQKFK-HHPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPVFPGGAI 166 (388)
Q Consensus 96 ~~~~~vsVGlv~~l---~~~~~~~~~~~---~~~~~k-~~P~i~~~l~~~~~~~--yga~~ip~gg~~~~p~~~~~g~lL 166 (388)
. ++.+-||..... +..++..++.+ +++... -.|.+. +.....+. .|.|.+...+-..-.+++.+.+++
T Consensus 284 ~-~g~~~iGtT~~~~~~~~~~~~~t~~~i~~ll~~~~~~~P~l~--~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~ 360 (561)
T 3da1_A 284 R-EGKTYIGTTDTFYDKDIASPRMTVEDRDYILAAANYMFPSLR--LTADDVESSWAGLRPLIHEEGKKASEISRKDEIF 360 (561)
T ss_dssp E-TTEEEECCCCEEECSCTTCCCCCHHHHHHHHHHHHHHCTTCC--CCTTTEEEEEEEEEEEEEC-----------CCEE
T ss_pred c-CCCEEEcCCCCccCCCcCCCCCCHHHHHHHHHHHHHhCCCCC--CChhhEEEEeEEeccccCCCCCCccccccceEEE
Confidence 8 567888863321 11233344332 333332 224322 11233332 244544322111122456677777
Q ss_pred EccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 167 IGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 167 vGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
.+ ..|+++.+-|+ +..+..-|..+.+.+.+.+.
T Consensus 361 ~~-~~gli~i~Ggk-~Tt~r~mAe~~~d~~~~~~~ 393 (561)
T 3da1_A 361 FS-DSGLISIAGGK-LTGYRKMAERTVDAVAQGLN 393 (561)
T ss_dssp EC-SSCCEEECCCC-STTHHHHHHHHHHHHHHHHT
T ss_pred ec-CCCeEEEeCCh-hhhHHHHHHHHHHHHHHhcC
Confidence 65 47899888777 66666666666666666654
No 113
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=81.71 E-value=15 Score=35.00 Aligned_cols=21 Identities=19% Similarity=-0.017 Sum_probs=17.0
Q ss_pred eeecCeEEEecEEEecccCCC
Q 016489 12 NFQRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 12 ~~~~g~~i~Ak~vI~AdG~~s 32 (388)
+.+++.+++|+.||+|+|..+
T Consensus 188 v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 188 VTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp EEESSCEEEEEEEEECCGGGH
T ss_pred EEECCCEEEcCEEEEcCCcCh
Confidence 445556899999999999873
No 114
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=81.55 E-value=11 Score=37.55 Aligned_cols=107 Identities=15% Similarity=-0.057 Sum_probs=52.5
Q ss_pred eeEEEEcCCCEEEEEEEEec---CCCCCCCChH---HHHHHHH-cCCCcccccCCCeeee--ecceeeccCCCcCCCccc
Q 016489 90 GSFLYHMNDRQIALGLVVAL---NYHNPFLNPY---EEFQKFK-HHPAIKPLLEGGTVVQ--YGARTLNEGGLQSIPYPV 160 (388)
Q Consensus 90 ggwiy~~~~~~vsVGlv~~l---~~~~~~~~~~---~~~~~~k-~~P~i~~~l~~~~~~~--yga~~ip~gg~~~~p~~~ 160 (388)
+.|+.|..++.+-||..-.. +..++..++. .+++... ..| ..+...+.+. .|.+.+...+.....++.
T Consensus 255 ~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p---~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~ 331 (501)
T 2qcu_A 255 IVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFK---KQLSRDDIVWTYSGVRPLCDDESDSPQAIT 331 (501)
T ss_dssp EEEEEEETTTEEEEECCCEECCSCGGGCCCCHHHHHHHHHHHHHHBS---SCCCGGGCCEEEEEEECCBCCCCSSGGGSC
T ss_pred EEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHHHHHHHHHHHHHhcC---CCCCcccEEEEEEEEeeecCCCCCccccCc
Confidence 45788887778888863211 1112223332 2233333 224 0122223222 244444433221122445
Q ss_pred cCCEEE--EccC-ccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 161 FPGGAI--IGCA-AGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 161 ~~g~lL--vGDA-AG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.+.++. .++. .|++. ++|.|+..+-.-|..+++.+.+.+
T Consensus 332 ~~~~i~~~~~~~~~gl~~-i~Gg~~t~~~~~Ae~~~~~~~~~~ 373 (501)
T 2qcu_A 332 RDYTLDIHDENGKAPLLS-VFGGKLTTYRKLAEHALEKLTPYY 373 (501)
T ss_dssp CCCEEEEEEETTEEEEEE-EECCCGGGHHHHHHHHHHHHGGGS
T ss_pred CceEEEecccCCCCCeEE-EeCccccchHHHHHHHHHHHHHhh
Confidence 566666 5654 55554 456677777777777777776654
No 115
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=81.53 E-value=29 Score=32.02 Aligned_cols=30 Identities=20% Similarity=0.336 Sum_probs=22.5
Q ss_pred eecC--eEEEecEEEecccCCCccchhHHHhc-CCC
Q 016489 13 FQRG--VELRGRITLLAEGCRGSLSEKLIKNF-KLR 45 (388)
Q Consensus 13 ~~~g--~~i~Ak~vI~AdG~~s~lar~l~~~~-gl~ 45 (388)
..+| .+++|+.||.|+|..| .+|.+.+ |++
T Consensus 188 ~~~g~~~~~~a~~VV~A~G~~s---~~l~~~~~g~~ 220 (369)
T 3dme_A 188 FGGAEPMTLSCRVLINAAGLHA---PGLARRIEGIP 220 (369)
T ss_dssp ECTTSCEEEEEEEEEECCGGGH---HHHHHTEETSC
T ss_pred ECCCceeEEEeCEEEECCCcch---HHHHHHhcCCC
Confidence 4445 4899999999999985 4555567 775
No 116
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=80.63 E-value=1.5 Score=39.77 Aligned_cols=39 Identities=18% Similarity=0.046 Sum_probs=33.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...||+..+||+++. .+-++.|+..|+.||..|.+.+..
T Consensus 255 t~~~~vya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 255 TTARGIFACGDVARP-----AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp CSSTTEEECSGGGCT-----TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEeecCCc-----hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 345899999999997 356899999999999999887754
No 117
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=79.15 E-value=2 Score=39.83 Aligned_cols=40 Identities=25% Similarity=0.169 Sum_probs=33.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+|+.++||+++. ..+.+..|+.+|..||..|.+.|++
T Consensus 297 t~~~~vya~GD~~~~----~~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 297 TSVPGFFAAGDVQDS----KYRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp CSSTTEEECGGGGCS----SCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeccCCC----CccceeeehhhhHHHHHHHHHHHhc
Confidence 456999999999983 2356789999999999999988754
No 118
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.78 E-value=2.2 Score=39.08 Aligned_cols=42 Identities=21% Similarity=0.268 Sum_probs=34.7
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+|+.++||+++.- ...+-++.|+..|..||+.|.+.+.+
T Consensus 277 t~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 277 TSVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp CSSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHH
Confidence 3579999999999863 33567899999999999999887754
No 119
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=77.43 E-value=0.68 Score=49.79 Aligned_cols=27 Identities=19% Similarity=0.515 Sum_probs=23.1
Q ss_pred eEEEecCCCccCCcccccC----CCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKD----PKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~c----p~~~I~w~ 375 (388)
.+.+|.++|++||.|+.+| |..+|...
T Consensus 173 ~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~~~ 203 (783)
T 3i9v_3 173 FVILDRERCIHCKRCVRYFEEVPGDEVLDFI 203 (783)
T ss_dssp TEEECTTTCCCCCHHHHHHHHTTCCCCCEEC
T ss_pred cEEEchhhCCCccHHHHHhhhhcCCceeeee
Confidence 5888999999999999999 77777543
No 120
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=77.13 E-value=0.47 Score=46.80 Aligned_cols=27 Identities=15% Similarity=0.038 Sum_probs=23.3
Q ss_pred eEEEecCCCc---cCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCL---HCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~---~Cg~C~~~cp~~~I~w~ 375 (388)
...||.+.|. +|+.|+.+||++||+|.
T Consensus 210 ~p~id~e~~~~~Ce~~~cv~~CPt~AI~~~ 239 (386)
T 3or1_B 210 PPMIDHENLAELCEIPLAVAACPTAAVKPI 239 (386)
T ss_dssp CCCCCTTTHHHHCCHHHHHHHCTTCCEEEE
T ss_pred cceechhhhcccccchhhhhhCchhhcccc
Confidence 5778988875 56999999999999996
No 121
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=76.62 E-value=2.7 Score=38.87 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=30.5
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
..-||+..+||.++. | .+=++.|+..|++||+.|.+.|+
T Consensus 268 Ts~pgIyA~GDv~~~--~--~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 268 TSVPGIFAAGDVRDK--G--LRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp CSSTTEEECSTTBSC--S--CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeecCCC--c--chHHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999863 1 13378999999999999987664
No 122
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=76.47 E-value=1.5 Score=43.53 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=27.4
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
-+|+.|+||.. .| |.||.-|+.||++||++|.+-|.+
T Consensus 457 i~gLyl~G~~t---~p--G~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 457 ITNLYLVGAGT---HP--GAGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp CTTEEECCCH-----------HHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCEEEECCCC---CC--cccHHHHHHHHHHHHHHHHHHhcC
Confidence 37999999864 33 679999999999999999988765
No 123
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=75.90 E-value=2.3 Score=41.22 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=22.5
Q ss_pred CeEEEecEEEecccCCCccchhHHHh
Q 016489 16 GVELRGRITLLAEGCRGSLSEKLIKN 41 (388)
Q Consensus 16 g~~i~Ak~vI~AdG~~s~lar~l~~~ 41 (388)
..+|+|++||+|+|..|.+.+.+.++
T Consensus 235 ~~~i~Ak~VV~ATG~~s~v~~~~~~~ 260 (344)
T 3jsk_A 235 PNTINAPVIISTTGHDGPFGAFSVKR 260 (344)
T ss_dssp CEEEECSEEEECCCSSSSSSCHHHHH
T ss_pred ceEEEcCEEEECCCCCchhhHHHHHH
Confidence 35899999999999999998877665
No 124
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=74.35 E-value=3.4 Score=37.89 Aligned_cols=40 Identities=23% Similarity=0.059 Sum_probs=31.0
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
+..-||+..+||+++. |. +=+..|+.+|.+||..|.+.|+
T Consensus 273 ~Ts~pgIyA~GDv~~~--~~--~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDR--VY--RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp BCSSTTEEECSTTTCS--SC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEeccCC--cc--hHHHHHHHHHHHHHHHHHHHHh
Confidence 4456999999999874 21 1267899999999999988764
No 125
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=72.83 E-value=0.5 Score=46.18 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=23.8
Q ss_pred eEEEecCCC-ccC--CcccccCCCCCeeEEC
Q 016489 349 KLQINAQNC-LHC--KACDIKDPKQNIKWTV 376 (388)
Q Consensus 349 ~~~i~~~~C-~~C--g~C~~~cp~~~I~w~~ 376 (388)
.+.||.+.| ..| +.|+.+||++||+|..
T Consensus 199 ~p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~~ 229 (366)
T 3mm5_B 199 PPIPNDEAIRKTCEIPSTVAACPTGALKPDM 229 (366)
T ss_dssp CCCCCHHHHHHHCCHHHHHHTCTTCCEEEET
T ss_pred ceEEcchhccccccccchhccCCccceEecC
Confidence 577888888 456 9999999999999973
No 126
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=71.36 E-value=0.84 Score=45.50 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=22.6
Q ss_pred eEEEecCCCcc-------CCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLH-------CKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~-------Cg~C~~~cp~~~I~w~ 375 (388)
.+.||.+.|.. |+.|+.+||++||+|.
T Consensus 242 ~~~iD~e~~~~~~~gc~i~~~cv~~CPt~Ai~~~ 275 (418)
T 3mm5_A 242 DIKVDQEAVKEYASWMDIENEVVKLCPTGAIKWD 275 (418)
T ss_dssp CCEECHHHHHHHHTTSCHHHHTGGGCTTCCEEEC
T ss_pred cccccHHHHhhhccccccCccccccCCccccccC
Confidence 57888877654 4889999999999996
No 127
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=71.29 E-value=0.33 Score=44.41 Aligned_cols=21 Identities=19% Similarity=0.564 Sum_probs=18.3
Q ss_pred EecCCCccCCcccccCCCCCe
Q 016489 352 INAQNCLHCKACDIKDPKQNI 372 (388)
Q Consensus 352 i~~~~C~~Cg~C~~~cp~~~I 372 (388)
.+.++|++||.|..+||..++
T Consensus 143 ~~~~~Ci~Cg~C~~~CP~~~~ 163 (243)
T 1kf6_B 143 HQFSGCINCGLCYAACPQFGL 163 (243)
T ss_dssp GGGGCCCCCCHHHHHCHHHHH
T ss_pred hhhhhccccCccccccCCCcc
Confidence 467899999999999998765
No 128
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=71.08 E-value=4.6 Score=33.96 Aligned_cols=41 Identities=17% Similarity=0.084 Sum_probs=33.2
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+...|++..+||+++...| -++.|+..|+.||..+...+++
T Consensus 132 ~t~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp BCSSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 3467999999999997654 4678999999999999876643
No 129
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=71.01 E-value=4.2 Score=37.37 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=33.5
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+++..+||+++.- ..-+..|+.+|+.||..|.+.|.+
T Consensus 276 t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 276 TSIPGVFAAGDVMDHI----YRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp CSSTTEEECGGGGCSS----SCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEcccccCCc----chhhhhhhccHHHHHHHHHHHHHh
Confidence 4568999999999863 245889999999999999988865
No 130
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=70.54 E-value=1.1 Score=41.32 Aligned_cols=19 Identities=21% Similarity=0.581 Sum_probs=16.8
Q ss_pred ecCCCccCCcccccCCCCC
Q 016489 353 NAQNCLHCKACDIKDPKQN 371 (388)
Q Consensus 353 ~~~~C~~Cg~C~~~cp~~~ 371 (388)
+...|++||.|..+||..+
T Consensus 154 ~~~~Ci~CG~C~~~CP~~~ 172 (252)
T 2h88_B 154 GLYECILCACCSTSCPSYW 172 (252)
T ss_dssp TTTTCCCCCTTGGGCHHHH
T ss_pred hHHhchhhCcchhhCCCCc
Confidence 5679999999999999765
No 131
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=70.41 E-value=0.28 Score=44.81 Aligned_cols=20 Identities=15% Similarity=0.492 Sum_probs=17.8
Q ss_pred ecCCCccCCcccccCCCCCe
Q 016489 353 NAQNCLHCKACDIKDPKQNI 372 (388)
Q Consensus 353 ~~~~C~~Cg~C~~~cp~~~I 372 (388)
+.+.|++||.|..+||+.++
T Consensus 147 ~~~~Ci~Cg~C~~~CP~~~~ 166 (241)
T 2bs2_B 147 ELDRCIECGCCIAACGTKIM 166 (241)
T ss_dssp HHHTCCCCCHHHHTCHHHHH
T ss_pred hhhhhhccCcCcccCCCCcc
Confidence 56899999999999998875
No 132
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=70.12 E-value=3.9 Score=37.28 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=32.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
...+|+..+||+++.- .+-+..|+..|+.||..|.+.++
T Consensus 274 t~~~~v~a~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 312 (315)
T 3r9u_A 274 TSVAGLFAAGDLRKDA----PKQVICAAGDGAVAALSAMAYIE 312 (315)
T ss_dssp CSSTTEEECGGGBTTC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCc----hhhhhhHHhhHHHHHHHHHHHHH
Confidence 3568999999998641 35788999999999999988764
No 133
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=69.58 E-value=1.2 Score=40.53 Aligned_cols=21 Identities=19% Similarity=0.423 Sum_probs=18.0
Q ss_pred EecCCCccCCcccccCCCCCe
Q 016489 352 INAQNCLHCKACDIKDPKQNI 372 (388)
Q Consensus 352 i~~~~C~~Cg~C~~~cp~~~I 372 (388)
.+.++|++||.|..+||..++
T Consensus 144 ~~~~~Ci~Cg~C~~~CP~~~~ 164 (238)
T 2wdq_B 144 DGLYECILCACCSTSCPSFWW 164 (238)
T ss_dssp TTTTTCCCCCTTGGGCHHHHH
T ss_pred hccccccccCCchhhCcCCcc
Confidence 467899999999999997664
No 134
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=69.29 E-value=5.2 Score=36.90 Aligned_cols=40 Identities=18% Similarity=0.063 Sum_probs=32.8
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+++..+||+++. | ..-++.|+..|+.||..|.+.|.+
T Consensus 278 t~~~~vya~GD~~~~--~--~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 278 TSVPGVYAAGDVTSG--N--FAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CSSTTEEECSTTBTT--C--CCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEeecccCc--c--hhhHHHHHHHHHHHHHHHHHHhhc
Confidence 357899999999985 2 246889999999999999887753
No 135
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=67.98 E-value=1.6 Score=37.63 Aligned_cols=27 Identities=15% Similarity=0.131 Sum_probs=22.6
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEecC
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVPD 343 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~~ 343 (388)
..|.+.|..| +.|+.+||.+++++...
T Consensus 40 ~~d~~~C~~C------g~Cv~~CP~~Ai~~~~~ 66 (166)
T 3gyx_B 40 NQEPEACWEC------YSCIKICPQGAITARPY 66 (166)
T ss_dssp ESCGGGCCCC------CHHHHHCSSCCEEECCC
T ss_pred ecCcccCccc------ChHhHhCCccceEEecc
Confidence 4577889887 78999999999998653
No 136
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=67.58 E-value=1.6 Score=36.84 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=22.0
Q ss_pred ecCCCCCcccCCCCCCCccccccCCceEEEec
Q 016489 311 LRDPKIPELVNLPEYAGPESRYCPARVYEYVP 342 (388)
Q Consensus 311 v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~ 342 (388)
+.|.+.|..| +.|+.+||.+++++..
T Consensus 41 ~id~~~C~~C------g~Cv~~CP~~AI~~~~ 66 (150)
T 1jnr_B 41 NREPDMCWEC------YSCVKMCPQGAIDVRG 66 (150)
T ss_dssp ESCGGGCCCC------CHHHHHCTTCCEEECC
T ss_pred eeCcccCcCH------hHHHHhCCccceEecC
Confidence 4577889886 7999999999999864
No 137
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=67.47 E-value=5.2 Score=36.77 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=34.0
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+|+..+||++.+-. ..+-++.|+..|..||+.|.+.+..
T Consensus 275 t~~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 275 TNIEGFFAAGDICTYEG--KVNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp CSSTTEEECGGGEECTT--CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred eecCCEEEccceecCCC--CcceEeeehhhHHHHHHHHHHhhCh
Confidence 35689999999996522 2456789999999999999998865
No 138
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=65.85 E-value=6.5 Score=35.93 Aligned_cols=39 Identities=23% Similarity=0.070 Sum_probs=31.8
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
...+++..+||+++.- .+-++.|+..|+.||..|.+.|+
T Consensus 271 t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 271 TNVQGLFAAGDIRIFA----PKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp CSSTTEEECSTTBTTC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEcccccCcc----hHHHHHHHHhHHHHHHHHHHHHh
Confidence 3578999999999862 24578999999999999987664
No 139
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=64.21 E-value=5.8 Score=38.54 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=28.8
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.+|+.++||+- .+.||.-|+.||+.||+.|.+.|
T Consensus 435 ~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 435 YPGVYMTGASF------EGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 47999999953 36689999999999999998765
No 140
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=63.65 E-value=6.1 Score=36.53 Aligned_cols=39 Identities=26% Similarity=0.183 Sum_probs=32.5
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+++..+||+++.- ..-+..|+..|+.||..|.+.|.+
T Consensus 286 ~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 286 SVPGVFAAGDVQDKK----YRQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp SSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeeccCCC----chhHHHHHHhHHHHHHHHHHHHHh
Confidence 568999999999853 345789999999999999887754
No 141
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=63.49 E-value=16 Score=35.57 Aligned_cols=37 Identities=11% Similarity=0.199 Sum_probs=24.2
Q ss_pred CCeeeeeeecCeEE--EecEEEecccCCCccchhHHHhcCCC
Q 016489 6 DGSKKENFQRGVEL--RGRITLLAEGCRGSLSEKLIKNFKLR 45 (388)
Q Consensus 6 dG~~~~~~~~g~~i--~Ak~vI~AdG~~s~lar~l~~~~gl~ 45 (388)
++++..+.+.+.++ +|+.||.|+|..+. +|.+.+|+.
T Consensus 226 ~~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~---~l~~~~g~~ 264 (448)
T 3axb_A 226 EARASAAVLSDGTRVEVGEKLVVAAGVWSN---RLLNPLGID 264 (448)
T ss_dssp CEEEEEEEETTSCEEEEEEEEEECCGGGHH---HHHGGGTCC
T ss_pred CCceEEEEeCCCEEeecCCEEEECCCcCHH---HHHHHcCCC
Confidence 34444454444478 99999999999754 344445654
No 142
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=63.10 E-value=4 Score=34.34 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=22.0
Q ss_pred eecCeEEEecEEEecccCCCccchhHHHhcCCC
Q 016489 13 FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLR 45 (388)
Q Consensus 13 ~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~ 45 (388)
+++| +++++.||.|+|.++.+.+. +|+.
T Consensus 92 ~~~g-~i~ad~vI~A~G~~~~~~~~----~g~~ 119 (180)
T 2ywl_A 92 TEEG-VEKAERLLLCTHKDPTLPSL----LGLT 119 (180)
T ss_dssp CSSC-EEEEEEEEECCTTCCHHHHH----HTCC
T ss_pred ECCC-EEEECEEEECCCCCCCcccc----CCCC
Confidence 4556 89999999999999866554 4765
No 143
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=63.01 E-value=6.8 Score=40.20 Aligned_cols=36 Identities=28% Similarity=0.215 Sum_probs=32.3
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.-+|+..+||.||. ..||-.|..+|..|||+|++.+
T Consensus 507 ~~~gly~~GegaG~-----a~gi~~Aa~~G~~~a~~i~~~~ 542 (549)
T 3nlc_A 507 NLKGFYPAGEGAGY-----AGGILSAGIDGIKVAEAVARDI 542 (549)
T ss_dssp TCBTEEECHHHHTS-----CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCCh-----hhHHHHHHHHHHHHHHHHHHHh
Confidence 56899999999997 6999999999999999998765
No 144
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=62.79 E-value=6.1 Score=39.03 Aligned_cols=38 Identities=13% Similarity=-0.072 Sum_probs=32.3
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+|+.++|++... .+.|++-|+.||+.||+.|.+.+..
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 4799999998763 5789999999999999999887653
No 145
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=62.58 E-value=7.4 Score=35.55 Aligned_cols=40 Identities=20% Similarity=0.091 Sum_probs=32.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+++..+||+++.-. +-++.|+..|+.||..|.+.|.+
T Consensus 267 t~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 267 TNVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp CSSTTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHHHHH
Confidence 34689999999998632 35789999999999999887643
No 146
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=62.50 E-value=6.1 Score=35.10 Aligned_cols=35 Identities=17% Similarity=0.047 Sum_probs=27.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
..||+.++||+| ... =...|+.+|+.||+.|.+.|
T Consensus 197 ~~p~iya~G~~a--~~g----~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCV--REG----DYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGT--SCC----CHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeecc--cCc----cHHHHHHHHHHHHHHHHhhc
Confidence 689999999999 332 22257899999999998765
No 147
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=62.27 E-value=2.1 Score=40.34 Aligned_cols=18 Identities=22% Similarity=0.602 Sum_probs=15.5
Q ss_pred cCCCccCCcccccCCCCC
Q 016489 354 AQNCLHCKACDIKDPKQN 371 (388)
Q Consensus 354 ~~~C~~Cg~C~~~cp~~~ 371 (388)
...|++||.|..+||.-.
T Consensus 179 ~~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 179 LYECILCACCSASCPSYW 196 (282)
T ss_pred hhhCcccCcCcccCCcee
Confidence 467999999999999765
No 148
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=61.92 E-value=1.8 Score=43.34 Aligned_cols=27 Identities=7% Similarity=0.091 Sum_probs=22.2
Q ss_pred eEEEecCCCccC-----------------------CcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHC-----------------------KACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~C-----------------------g~C~~~cp~~~I~w~ 375 (388)
.++||.+.|..| +.|+..||++||+|.
T Consensus 243 ~i~id~~~v~~~~~~e~~~~~~a~~g~~~~~~di~~~vv~~CPt~ai~~~ 292 (437)
T 3or1_A 243 DIKIDQEAVKAYVGGEFKPNAGAHAGRDWGKFDIEAEVVGLCPTGCMTYE 292 (437)
T ss_dssp CCEECHHHHHHHHHTSSCGGGGTTTTSCCCSCCHHHHTTTTCTTCCEEEE
T ss_pred CCccCHHHHHHHhhcCCCCcccccccCcCcccccchhhhccCcHHheeec
Confidence 588898877544 479999999999996
No 149
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=61.79 E-value=7.6 Score=35.86 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=32.4
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..|++..+||+++.- ..-++.|+..|+.||+.|...+.+
T Consensus 275 ~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 275 NIPMLFAAGDVSDYI----YRQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp SSTTEEECSTTTCSS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcc----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999862 245889999999999999887754
No 150
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=61.57 E-value=4 Score=41.97 Aligned_cols=51 Identities=18% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCeeeee-eecCeEEEecEEEecccCCCccchhHHHhcCCCcccCCCCceEEEEEE
Q 016489 6 DGSKKEN-FQRGVELRGRITLLAEGCRGSLSEKLIKNFKLREKSHAQHQTYALGIK 60 (388)
Q Consensus 6 dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~lar~l~~~~gl~~~~~~~~~~~~lgvk 60 (388)
+|++..+ +.+|.+++|+.||+|+|.++.-.-.+++..|+. .....+.+|++
T Consensus 250 ~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~----~~~~~~~vgVr 301 (549)
T 3nlc_A 250 DGQITGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVY----MEAKPFSVGFR 301 (549)
T ss_dssp SSBEEEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCC----CEECCEEEEEE
T ss_pred CCEEEEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCC----cccceEEEEEE
Confidence 3445544 456778999999999999985332344556765 23345677776
No 151
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=60.85 E-value=7.5 Score=38.48 Aligned_cols=36 Identities=28% Similarity=0.266 Sum_probs=30.9
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+|+.++|++.. +-|++-|+.||+.||+.|.+.+..
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 379999999864 458999999999999999987754
No 152
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=59.77 E-value=5.6 Score=36.61 Aligned_cols=40 Identities=18% Similarity=-0.068 Sum_probs=30.8
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
+..-||+..+||+++. |+ .=+..|+.+|+.||.+|.+.|.
T Consensus 261 ~Ts~p~IyA~GDv~~~--~~--~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 261 RTSEKNIYLAGETTTQ--GP--SSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp BCSSTTEEECSHHHHT--SC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCC--cc--hHHHHHHHHHHHHHHHHHHHHh
Confidence 3456899999999863 21 2367899999999999988763
No 153
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=59.38 E-value=5.8 Score=39.89 Aligned_cols=45 Identities=11% Similarity=-0.224 Sum_probs=34.0
Q ss_pred ccccCC-EEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 158 YPVFPG-GAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 158 ~~~~~g-~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+...++ ++|+||||=-.-|+.++|+..+|.++.-+|..+...+++
T Consensus 389 ~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~g 434 (497)
T 2bry_A 389 KHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEG 434 (497)
T ss_dssp ETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhCC
Confidence 445566 999999992122239999999999999888888776654
No 154
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=59.22 E-value=5.1 Score=34.75 Aligned_cols=37 Identities=14% Similarity=-0.098 Sum_probs=30.0
Q ss_pred CCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 162 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+++.++|++... .+ .=|+-|+.||..||+.|.+.+..
T Consensus 118 grl~FAGe~ts~-~~---g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 118 GPVYFAGEHVSL-KH---AWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp TTEEECSGGGTT-ST---TSHHHHHHHHHHHHHHHHTCCC-
T ss_pred CcEEEEEHHHcC-Cc---cCHHHHHHHHHHHHHHHHHHhcc
Confidence 689999999884 33 33777999999999999987754
No 155
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=57.58 E-value=10 Score=35.29 Aligned_cols=40 Identities=28% Similarity=0.144 Sum_probs=32.2
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...+++..+||+++.- ..-...|+..|+.||..|.+.|..
T Consensus 278 t~~~~iya~GD~~~~~----~~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRT----YRQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp CSSTTEEECGGGTCCS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCcc----HHHHHHHHHhHHHHHHHHHHHhhc
Confidence 3578999999999852 245788999999999999877753
No 156
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=55.01 E-value=12 Score=34.40 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=32.8
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+++..+||+++.-+. ..=++.|+..|..||+.|...+..
T Consensus 278 ~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 278 SIPGVYACGDIVTYPGK--LPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp SSTTEEECSTTEECTTC--CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEeccccccCcc--hhhhhhhHHHHHHHHHHHHHHhhh
Confidence 46899999999986432 245788999999999999887754
No 157
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=53.96 E-value=7.3 Score=38.23 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=27.6
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
.+|+.++||+. .+.||.-|+.||+.||+.|.+.+.
T Consensus 440 ~~~l~~aG~~~------~g~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 440 LPGLHLIGNAY------KGVGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHCC---
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 37999999983 256899999999999999976653
No 158
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.76 E-value=14 Score=35.87 Aligned_cols=43 Identities=9% Similarity=-0.009 Sum_probs=34.7
Q ss_pred ccCCEEEEccCccccCC----C---CccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNV----P---KIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp----~---~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+++..+||++++.++ + ..+=.+.|+..|..||+.|.+.+.+
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999999998753 1 1244689999999999999988863
No 159
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=52.70 E-value=11 Score=36.50 Aligned_cols=37 Identities=8% Similarity=-0.121 Sum_probs=30.0
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
-+|+.++||+....-| .+|+-|+.||+.||+.|.+.+
T Consensus 415 ~~~l~~aG~~~~~~~~---g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY---QHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp BTTEEECCGGGCSTTT---TSHHHHHHHHHHHHHHHHHHC
T ss_pred cCceEEeecccccccc---cchHHHHHHHHHHHHHHHHHh
Confidence 3799999998754323 379999999999999998765
No 160
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=52.66 E-value=11 Score=36.93 Aligned_cols=36 Identities=19% Similarity=0.069 Sum_probs=29.1
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+|+.++||+- .+.||.-|+.||+.||+.|.+.+..
T Consensus 432 ~~~l~~aG~~~------~g~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 432 YPGIYLAGLAY------DGVGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp STTEEECSTTT------SCSSHHHHHHHHHHHHHHHHHTC--
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 37999999953 3568999999999999999987754
No 161
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=52.20 E-value=13 Score=35.53 Aligned_cols=42 Identities=19% Similarity=0.029 Sum_probs=26.5
Q ss_pred ccCCEEEEccCccccCCCCccc--hHHHHHHHHHHHHHHHHhhc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKG--THTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~G--i~~Am~SG~lAAeai~~al~ 201 (388)
..||+++.|-++.-++-..--| +.--+.||+.|||.|++.|.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 4677778887775543211111 11246899999999988663
No 162
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=52.10 E-value=15 Score=35.94 Aligned_cols=43 Identities=14% Similarity=-0.112 Sum_probs=34.9
Q ss_pred ccCCEEEEccCccccCCC-------CccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVP-------KIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~-------~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+++..+||++++-++- ..+=.+.|+..|..||+.|.+.|.+
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g 345 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEG 345 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 579999999999987531 2344678999999999999988864
No 163
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=52.03 E-value=9.6 Score=36.96 Aligned_cols=39 Identities=15% Similarity=0.033 Sum_probs=32.1
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...+++..+||+++..+|.+++ =+..|+..|+.||+.+.
T Consensus 263 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 306 (408)
T 2gqw_A 263 TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV 306 (408)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhc
Confidence 3568999999999998776553 46799999999998875
No 164
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=51.05 E-value=11 Score=37.04 Aligned_cols=40 Identities=18% Similarity=-0.105 Sum_probs=32.6
Q ss_pred ccccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
+...|++..+||.|+.-++.++. --+.|+..|++||+.+.
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 34679999999999998876543 36889999999999875
No 165
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=50.78 E-value=8 Score=36.15 Aligned_cols=34 Identities=18% Similarity=-0.102 Sum_probs=28.7
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGV 199 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~a 199 (388)
..+++.|+||+-. +-||.-|+.||+.||+.|.+.
T Consensus 308 ~~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 308 HKPFLACGGDGFT------QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp TTTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTTC
T ss_pred CCccEEEEccccC------CCCccHHHHHHHHHHHHHHhh
Confidence 3589999999864 459999999999999998764
No 166
>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1
Probab=50.27 E-value=5 Score=40.55 Aligned_cols=27 Identities=22% Similarity=0.306 Sum_probs=22.0
Q ss_pred CCCcccCCCCCCCccccccCCceEEEe
Q 016489 315 KIPELVNLPEYAGPESRYCPARVYEYV 341 (388)
Q Consensus 315 ~~c~~~~~~~~~~~c~~~CPa~~y~~~ 341 (388)
+.|..|.--.+.+.|+..||.+.|.+.
T Consensus 216 ~~C~aC~~~~~~g~Cv~~CP~~~y~~~ 242 (478)
T 1igr_A 216 TACVACRHYYYAGVCVPACPPNTYRFE 242 (478)
T ss_dssp TSEEEESSEECSSSEESSCCTTCEEET
T ss_pred cceeeeeeeccCCcCcccCCCceeEec
Confidence 348887666778999999999999874
No 167
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=50.08 E-value=14 Score=36.21 Aligned_cols=39 Identities=15% Similarity=-0.057 Sum_probs=32.5
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||++.+-++.++. =.+.|+..|+.||+.+.
T Consensus 270 t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 270 TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 4568999999999988877653 46899999999998875
No 168
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=49.55 E-value=17 Score=34.05 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=33.4
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..+++..+||+++.-+. ..-+..|+..|..||+.|...+..
T Consensus 289 ~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 289 SVDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp SSTTEEECSTTEECTTC--CCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEecCccCCCCc--cceeehhHHHHHHHHHHHHhhcCC
Confidence 56899999999986432 245788999999999999988865
No 169
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=49.22 E-value=16 Score=36.01 Aligned_cols=39 Identities=15% Similarity=-0.010 Sum_probs=31.2
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+++.++||+...-.+ .-|+-|+.||+.||+.|.+.+..
T Consensus 449 ~~~l~fAGe~t~~~~~---g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 449 HGGVVFANSDWALGWR---SFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp BTTEEECCGGGCSSST---TSHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEechhhhcCCc---eEEEhHHHHHHHHHHHHHHHhcc
Confidence 4689999998653223 44888999999999999988865
No 170
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=49.15 E-value=11 Score=36.42 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=32.0
Q ss_pred ccccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~~ 198 (388)
+...|++..+||++++-++. +. =++.|+..|+.||+.+..
T Consensus 264 ~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 264 ATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp BCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred eECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHcC
Confidence 34679999999999987775 22 268999999999998753
No 171
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=48.80 E-value=15 Score=36.53 Aligned_cols=38 Identities=13% Similarity=-0.027 Sum_probs=31.3
Q ss_pred CCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 162 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+|+.++||+...-.| .+|+-|+.||+.||+.|.+.+..
T Consensus 419 ~~L~fAG~~t~~~~~---g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 419 DRIYFAGTETATHWS---GYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp TTEEECSGGGCSSST---TSHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEeehhhcCcCc---EEhHHHHHHHHHHHHHHHHHHhc
Confidence 799999998754322 37999999999999999988853
No 172
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=48.78 E-value=13 Score=37.54 Aligned_cols=40 Identities=23% Similarity=0.197 Sum_probs=33.3
Q ss_pred cccCCEEEEccCccccCCCCccc-----hHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKG-----THTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~G-----i~~Am~SG~lAAeai~~ 198 (388)
...|++..+||++.+-++.++.- .+.|+..|+.||+.+..
T Consensus 293 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 293 TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 35699999999998887766543 78999999999998863
No 173
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=48.77 E-value=13 Score=36.51 Aligned_cols=38 Identities=18% Similarity=-0.016 Sum_probs=31.9
Q ss_pred CCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 162 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+++.++|++... -...+|+-|+.||+.||+.|.+.+..
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 699999998753 23568999999999999999988754
No 174
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=48.64 E-value=9.4 Score=37.45 Aligned_cols=39 Identities=15% Similarity=-0.027 Sum_probs=32.4
Q ss_pred cccCCEEEEccCccccCCCCc-----cchHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||+++..++.++ .-.+.|+..|+.||+.+.
T Consensus 272 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 272 SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 356899999999999877665 357899999999998774
No 175
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=48.28 E-value=12 Score=36.85 Aligned_cols=24 Identities=8% Similarity=0.003 Sum_probs=18.5
Q ss_pred eeeeecCeEEEecEEEecccCCCc
Q 016489 10 KENFQRGVELRGRITLLAEGCRGS 33 (388)
Q Consensus 10 ~~~~~~g~~i~Ak~vI~AdG~~s~ 33 (388)
..+.+.+.+++|+.||+|+|..|.
T Consensus 165 ~~V~~~~g~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 165 FRVTTSAGTVDAASLVVASGGKSI 188 (417)
T ss_dssp EEEEETTEEEEESEEEECCCCSSC
T ss_pred EEEEECCcEEEeeEEEECCCCccC
Confidence 334444459999999999999983
No 176
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=48.22 E-value=16 Score=35.04 Aligned_cols=39 Identities=21% Similarity=0.072 Sum_probs=32.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
..||+.++||++++-.| +=.+.|+..|..||+.|...+.
T Consensus 298 ~~~~vfa~GD~~~~~~~---~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVP---KLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp SCTTEEECGGGBTTCCS---CCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeehhccCCCC---cHHHHHHHHHHHHHHHHHHHhc
Confidence 57999999999997333 4467899999999999998884
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=48.06 E-value=8.1 Score=37.30 Aligned_cols=39 Identities=21% Similarity=0.008 Sum_probs=32.2
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||++.+-+|.++. =++.|+..|+.||+.+.
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 3579999999999998877643 36899999999998774
No 178
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=47.84 E-value=13 Score=35.79 Aligned_cols=38 Identities=18% Similarity=0.040 Sum_probs=30.4
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||++.+-++.. +-.+.|+..|+.||+.+.
T Consensus 255 t~~~~IyA~GD~a~~~~~~~-~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 255 TSIKDIYACGDVAEFYGKNP-GLINIANKQGEVAGLNAC 292 (385)
T ss_dssp CSSTTEEECGGGEEETTBCC-CCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeeEecCCCcc-cHHHHHHHHHHHHHHHhc
Confidence 46799999999999876543 346889999999998774
No 179
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=47.17 E-value=16 Score=36.50 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=30.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
..+++..+||+++. ..+..|+..|++||+.|...+
T Consensus 342 s~~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 342 IKDGIYVAGSAVSI------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EETTEEECSTTTCC------CCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCc------cCHHHHHHHHHHHHHHHHHHc
Confidence 67899999999985 368899999999999998766
No 180
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=47.10 E-value=13 Score=34.33 Aligned_cols=40 Identities=10% Similarity=-0.020 Sum_probs=29.8
Q ss_pred cccCCEEEEc--cCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIG--CAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvG--DAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...|++..+| |+++. ..+-+..|+..|+.||+.|.+.|++
T Consensus 312 t~~~~vya~Gd~d~~~~----~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 312 LAVPSVWLLGYGDWNGM----ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SSCTTEEECSSCGGGST----TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCeEEecccccccc----chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 3568999999 66662 1234556999999999999988754
No 181
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=46.98 E-value=22 Score=33.11 Aligned_cols=42 Identities=12% Similarity=-0.175 Sum_probs=31.4
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..|++..+||++..-++.. ..++.|...|..+|+.+...+..
T Consensus 299 ~~~~v~a~GD~~~~~~~~~-~~~~~~~~~a~~~a~~l~~~~~~ 340 (369)
T 3d1c_A 299 RYPNIFMIGATVENDNAKL-CYIYKFRARFAVLAHLLTQREGL 340 (369)
T ss_dssp SSTTEEECSTTCCCSSCCC-CSHHHHGGGHHHHHHHHHHHTTC
T ss_pred CCCCeEEeccccccCCeeE-EEEehhhHHHHHHHHHHhcccCC
Confidence 4689999999999876654 36777777788888877665543
No 182
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=46.45 E-value=17 Score=35.54 Aligned_cols=32 Identities=19% Similarity=0.126 Sum_probs=27.7
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
.+++.++||. +.+.||.-|+.||+.||+.|.+
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 4689999987 3577999999999999999875
No 183
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=45.74 E-value=8.5 Score=37.19 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=21.6
Q ss_pred eeeecCeEEEecEEEecccCCC-ccchhHHHhcCCC
Q 016489 11 ENFQRGVELRGRITLLAEGCRG-SLSEKLIKNFKLR 45 (388)
Q Consensus 11 ~~~~~g~~i~Ak~vI~AdG~~s-~lar~l~~~~gl~ 45 (388)
.+.+.+.+++|+.||+|+|+.| .|.++ .+|+.
T Consensus 215 ~v~~~~g~i~a~~VV~A~G~~s~~l~~~---~~g~~ 247 (405)
T 3c4n_A 215 IVVHETRQIRAGVIIVAAGAAGPALVEQ---GLGLH 247 (405)
T ss_dssp --CBCCEEEEEEEEEECCGGGHHHHHHH---HHCCC
T ss_pred EEEECCcEEECCEEEECCCccHHHHHHH---hcCCC
Confidence 4444555899999999999987 45441 34665
No 184
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=45.68 E-value=22 Score=33.91 Aligned_cols=42 Identities=26% Similarity=0.231 Sum_probs=32.7
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...||+..+||++.... ..+=-+.|+..|..||+.|.+.+++
T Consensus 284 t~~p~VfAiGDva~~~~--~pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAP--MPKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp SSSTTEEECGGGBCCTT--SCBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEecccccCCC--CCchHHHHHHHHHHHHHHHHHHhcC
Confidence 34699999999886542 1233478999999999999988864
No 185
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=45.55 E-value=13 Score=36.30 Aligned_cols=39 Identities=15% Similarity=-0.015 Sum_probs=32.0
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||+++..+|.++. =+..|+..|+.||+.+.
T Consensus 274 ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 274 TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 3568999999999988776542 46889999999998875
No 186
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=45.24 E-value=9.7 Score=37.44 Aligned_cols=41 Identities=12% Similarity=-0.010 Sum_probs=30.2
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.-||+.++|..++.--++-|-.+..|+.||++||+.+.+..
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 46889999998883234555566779999999998886544
No 187
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=45.08 E-value=14 Score=34.13 Aligned_cols=23 Identities=17% Similarity=0.249 Sum_probs=19.3
Q ss_pred eEEEecCCCccCCcccccCCCCCeeEE
Q 016489 349 KLQINAQNCLHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i~~~~C~~Cg~C~~~cp~~~I~w~ 375 (388)
.+.+| .+||.|...||.++|...
T Consensus 169 ~I~i~----~~C~~C~~~CP~g~I~id 191 (265)
T 2pa8_D 169 KVEIL----ANCEKAVNVCPEGVFELK 191 (265)
T ss_dssp EEEEC----SCCTTHHHHCTTCCEEEE
T ss_pred chhhh----hhHHHHHHhCcccCeEec
Confidence 46666 889999999999998764
No 188
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=45.05 E-value=16 Score=36.18 Aligned_cols=38 Identities=26% Similarity=0.034 Sum_probs=31.7
Q ss_pred ccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
..+++..+||++...++.+++ =.+.|+..|+.||+.+.
T Consensus 309 s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 309 NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 468999999999987766543 37899999999999875
No 189
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=44.79 E-value=14 Score=35.64 Aligned_cols=39 Identities=18% Similarity=-0.011 Sum_probs=32.3
Q ss_pred cccCCEEEEccCccccCCCC-c-----cchHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPK-I-----KGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~-~-----~Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||++++.++++ + +-++.|+..|+.||+.+.
T Consensus 275 t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 275 TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 35799999999999988765 3 237899999999999875
No 190
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=44.74 E-value=16 Score=36.32 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=31.8
Q ss_pred ccCCEEEEccCccccCCCCc-----cchHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 197 (388)
..|++..+||+++..++.++ .=.+.|+..|+.||+.+.
T Consensus 317 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 317 SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 56899999999998876655 347899999999999885
No 191
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=43.81 E-value=18 Score=36.83 Aligned_cols=40 Identities=20% Similarity=0.076 Sum_probs=33.3
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||++.+-++.++. -.+.|+..|++||+.+..
T Consensus 308 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 308 TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 3568999999999888776653 568899999999998875
No 192
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=43.73 E-value=20 Score=36.00 Aligned_cols=39 Identities=21% Similarity=0.108 Sum_probs=32.1
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
..||+..+||+++.- .+-+..|+..|..||..|.+.|.+
T Consensus 479 s~p~VfA~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVP----YKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp SSTTEEECSTTBCCS----SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCC----cceeeehHHhHHHHHHHHHHHHHh
Confidence 468999999999852 246889999999999999887643
No 193
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=42.42 E-value=10 Score=39.45 Aligned_cols=30 Identities=10% Similarity=0.154 Sum_probs=24.6
Q ss_pred CCeEecCCCCCcccCCCCCCCccccccCCceEEEec
Q 016489 307 AHLRLRDPKIPELVNLPEYAGPESRYCPARVYEYVP 342 (388)
Q Consensus 307 ~Hl~v~d~~~c~~~~~~~~~~~c~~~CPa~~y~~~~ 342 (388)
...-++..+.|++| |.|++-||-+++++..
T Consensus 45 ~~~~~i~~~~c~~~------~~~~~~cp~~~i~i~n 74 (608)
T 3j16_B 45 SKIAFISEILCIGC------GICVKKCPFDAIQIIN 74 (608)
T ss_dssp TTEEEECTTTCCCC------CHHHHHCSSCCEEEEE
T ss_pred CCceEEehhhcccc------ccccccCCccceEEec
Confidence 44445678999997 8999999999999854
No 194
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=42.40 E-value=3.8 Score=44.19 Aligned_cols=19 Identities=26% Similarity=0.639 Sum_probs=17.0
Q ss_pred ecCCCccCCcccccCCCCC
Q 016489 353 NAQNCLHCKACDIKDPKQN 371 (388)
Q Consensus 353 ~~~~C~~Cg~C~~~cp~~~ 371 (388)
+.+.|++||.|..+||..+
T Consensus 413 ~~~~Ci~CG~C~~~CP~~~ 431 (807)
T 3cf4_A 413 MVAKCADCGACLLACPEEI 431 (807)
T ss_dssp HHHHCCCCCHHHHHCTTCC
T ss_pred hHHhCCCCCchhhhCCCCC
Confidence 5678999999999999876
No 195
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=42.30 E-value=7.6 Score=38.17 Aligned_cols=39 Identities=21% Similarity=0.266 Sum_probs=31.4
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...|++..+||+++.-++.+++ -.+.|+..|+.||+.+.
T Consensus 269 t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 269 TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 3579999999999987765543 67889999999987653
No 196
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=41.97 E-value=15 Score=35.43 Aligned_cols=30 Identities=17% Similarity=-0.039 Sum_probs=25.4
Q ss_pred CCEEEEccCccccCCCCccch--HHHHHHHHHHHHHH
Q 016489 162 PGGAIIGCAAGFLNVPKIKGT--HTAMKSGMLAAEAG 196 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi--~~Am~SG~lAAeai 196 (388)
+|+.|+||... | ..|+ .-|+.||+.||++|
T Consensus 372 ~gl~laGd~~~---~--~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYR---P--PGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCC---C--TTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCccc---C--CCceeeehHHHHHHHHHHHh
Confidence 99999999985 2 2355 88999999999998
No 197
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=41.22 E-value=21 Score=35.34 Aligned_cols=38 Identities=18% Similarity=-0.023 Sum_probs=30.9
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
...+++..+||++.. | .=+..|+..|+.||+.|...|.
T Consensus 407 Ts~~~VfA~GD~~~g--~---~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRG--A---SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CSSTTEEECGGGGSS--C---CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCC--c---hHHHHHHHHHHHHHHHHHHHhh
Confidence 356899999999864 2 3478999999999999987764
No 198
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=41.19 E-value=5.9 Score=40.76 Aligned_cols=27 Identities=7% Similarity=-0.024 Sum_probs=23.2
Q ss_pred eEEE-ecCCC------ccCCcccccCCCCCeeEE
Q 016489 349 KLQI-NAQNC------LHCKACDIKDPKQNIKWT 375 (388)
Q Consensus 349 ~~~i-~~~~C------~~Cg~C~~~cp~~~I~w~ 375 (388)
.++| |.+.| ..||.|...||.++|+|.
T Consensus 503 hl~~~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~ 536 (584)
T 2gmh_A 503 HLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFV 536 (584)
T ss_dssp SEEESSTTHHHHTHHHHHCCTHHHHCTTCCEEEE
T ss_pred eEEEcCcccchhhchhhhcchhhhcCChhhEEEe
Confidence 5655 67789 899999999999999984
No 199
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=40.96 E-value=23 Score=34.89 Aligned_cols=38 Identities=16% Similarity=-0.084 Sum_probs=31.5
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+++.++|++...- ..+|+-||.||+.||+.|.+.+..
T Consensus 449 ~~~l~fAGe~t~~~----~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 449 QGRIYFAGEYTAQA----HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp BTTEEECSGGGSSS----SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEcccccC----CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 47999999998531 247999999999999999988754
No 200
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=40.73 E-value=15 Score=32.49 Aligned_cols=29 Identities=21% Similarity=0.079 Sum_probs=21.0
Q ss_pred CCeeeee-eecCeEEEecEEEecccCCCcc
Q 016489 6 DGSKKEN-FQRGVELRGRITLLAEGCRGSL 34 (388)
Q Consensus 6 dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~l 34 (388)
++++..+ +.+|.+++|++||+|+|..+..
T Consensus 98 ~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 98 GNRVVGVRTWEGPPARGEKVVLAVGSFLGA 127 (232)
T ss_dssp TTEEEEEEETTSCCEECSEEEECCTTCSSC
T ss_pred CCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 3444344 3466689999999999997653
No 201
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=40.72 E-value=18 Score=36.08 Aligned_cols=39 Identities=15% Similarity=-0.121 Sum_probs=31.6
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+++.++|++...--+-+ |+-|+.||..||+.|.+++..
T Consensus 471 ~~rl~FAGe~ts~~~~g~---v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGC---AYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp SSSEEECSTTSCSTTBTS---HHHHHHHHHHHHHHHHHHHHG
T ss_pred CCcEEEeccccccCCCcc---chhHHHHHHHHHHHHHHHhhh
Confidence 478999999987654544 667999999999999987754
No 202
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Probab=40.05 E-value=6.1 Score=40.00 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.8
Q ss_pred CcccCCCCCCCccccccCCceEEE
Q 016489 317 PELVNLPEYAGPESRYCPARVYEY 340 (388)
Q Consensus 317 c~~~~~~~~~~~c~~~CPa~~y~~ 340 (388)
|..|..-.+.+.|+..||.+-|..
T Consensus 225 ClsC~~~~~~g~Cv~~CP~g~y~~ 248 (486)
T 2hr7_A 225 CVACRNFYLDGRCVETCPPPYYHF 248 (486)
T ss_dssp BSSBSSEEETTEEESSCCTTCEEE
T ss_pred cccCccccCCCccccccCCCeEec
Confidence 888877678899999999999875
No 203
>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A
Probab=39.58 E-value=13 Score=38.79 Aligned_cols=55 Identities=20% Similarity=0.320 Sum_probs=34.2
Q ss_pred CCCCcccCCCCCCCccccccCCceE------EEecCCCCceeEEEecCCCc-cC---------CcccccCCCCC
Q 016489 314 PKIPELVNLPEYAGPESRYCPARVY------EYVPDEKNQLKLQINAQNCL-HC---------KACDIKDPKQN 371 (388)
Q Consensus 314 ~~~c~~~~~~~~~~~c~~~CPa~~y------~~~~~~~~~~~~~i~~~~C~-~C---------g~C~~~cp~~~ 371 (388)
+.-|..|.--.+.+.|+..||.+-| ++....++ +..+ ..+|+ .| |.|+..||.+-
T Consensus 228 ~~~C~aC~~~~~~g~Cv~~CP~~~~y~~~t~~~~~n~~~--~y~~-~~~Cv~~Cp~~~~~~~~~~Cv~~CP~g~ 298 (608)
T 1n8y_C 228 HSDCLACLHFNHSGICELHCPALVTYNTDTFESMHNPEG--RYTF-GASCVTTCPYNYLSTEVGSCTLVCPPNN 298 (608)
T ss_dssp TTSBSSBSSEEETTEEESSCCCSEEC-----CCEECTTC--CEEE-TTEEESSCCTTCEECTTSBEESSCCTTE
T ss_pred CCccccCcccccCCchhccCCCcccccCcceeeecCCcc--cccc-chhhhhcCCcccEeccCCeEeccCCCCC
Confidence 3457777655678999999999963 12211112 3333 46676 45 67888888664
No 204
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=39.30 E-value=26 Score=31.91 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=29.6
Q ss_pred cCCEEEEccCccccC--CCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLN--VPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vd--p~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.|++..+||++..+. |.-+-=...|+.||..||+.|.+.|+.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 378888999876542 211222446889999999999988865
No 205
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=39.15 E-value=24 Score=34.30 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=32.8
Q ss_pred cccCCEEEEccCccccCCCC-------ccchHHHHHHHHHHHHHHHHhhcc
Q 016489 159 PVFPGGAIIGCAAGFLNVPK-------IKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~-------~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
...|++..+||+|.+-++-. -+==+.|+..|..||+.|.+.+++
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g 334 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 34589999999998754211 111258999999999999988864
No 206
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=38.63 E-value=25 Score=34.52 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=29.7
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHh
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGV 199 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~a 199 (388)
...|++..+||+++. ..-.+.|+..|+.||+.|...
T Consensus 298 t~~~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 298 TNIPNVFATGDANGL-----APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CSSTTEEECGGGTCS-----CCSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCC-----CccHhHHHHHHHHHHHHHhCC
Confidence 356999999999987 244688999999999998753
No 207
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=38.34 E-value=18 Score=35.64 Aligned_cols=39 Identities=15% Similarity=-0.078 Sum_probs=31.8
Q ss_pred cccCCEEEEccCccccCCCCcc-----chHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIK-----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 197 (388)
...+++..+||++.+-++.+++ =.+.|+..|+.||+.+.
T Consensus 284 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 284 TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 3569999999999887776654 35789999999999875
No 208
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=37.97 E-value=3.3 Score=44.92 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=21.0
Q ss_pred CcccCCCCCCCccccccCCceEEE
Q 016489 317 PELVNLPEYAGPESRYCPARVYEY 340 (388)
Q Consensus 317 c~~~~~~~~~~~c~~~CPa~~y~~ 340 (388)
|..|..-.+.+.|+..||.+-|.+
T Consensus 225 C~~C~~~~~~~~Cv~~Cp~~~y~~ 248 (897)
T 2dtg_E 225 CVACRNFYLDGRCVETCPPPYYHF 248 (897)
T ss_dssp EECCSSCBBTTBCCSSCCSSCCCC
T ss_pred eeECccCccCCcchhhcCCceeEe
Confidence 888877788999999999998865
No 209
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=37.90 E-value=15 Score=35.92 Aligned_cols=38 Identities=21% Similarity=0.023 Sum_probs=30.9
Q ss_pred ccCCEEEEccCccccCCCCc-----cchHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKI-----KGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 197 (388)
..+++..+||+++..++.++ +-.+.|+..|+.||+.+.
T Consensus 272 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 272 SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 46899999999998766544 357899999999998764
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=37.36 E-value=18 Score=36.10 Aligned_cols=37 Identities=27% Similarity=0.165 Sum_probs=29.9
Q ss_pred cCCEEEEccCccccCCCCcc----chHHHHHHHHHHHHHHH
Q 016489 161 FPGGAIIGCAAGFLNVPKIK----GTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~----Gi~~Am~SG~lAAeai~ 197 (388)
.+++..+||++++.++.++. =...|+..|++||+.+.
T Consensus 310 ~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 310 RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 48999999999998876543 23489999999998875
No 211
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=35.82 E-value=19 Score=34.88 Aligned_cols=21 Identities=10% Similarity=0.041 Sum_probs=17.4
Q ss_pred eeecCeEEEecEEEecccCCC
Q 016489 12 NFQRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 12 ~~~~g~~i~Ak~vI~AdG~~s 32 (388)
+..++.+++|+.||+|+|..|
T Consensus 148 v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 148 LQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EEETTEEEEESEEEECCCCSS
T ss_pred EEECCCEEECCEEEECCCCcc
Confidence 444455899999999999998
No 212
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=35.71 E-value=28 Score=34.05 Aligned_cols=27 Identities=26% Similarity=0.379 Sum_probs=20.3
Q ss_pred CCeeeeee-ecCeEEEecEEEecccCCC
Q 016489 6 DGSKKENF-QRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 6 dG~~~~~~-~~g~~i~Ak~vI~AdG~~s 32 (388)
+|.+..+. .+|.+++|+.||+|+|..|
T Consensus 164 ~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 164 NGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 45544443 4565699999999999999
No 213
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=32.38 E-value=52 Score=30.65 Aligned_cols=25 Identities=8% Similarity=-0.159 Sum_probs=20.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHhh
Q 016489 176 VPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 176 p~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
-+.+.|+..|..+|+++|+.|...+
T Consensus 334 G~~g~G~~~a~~~g~~~a~li~~~l 358 (363)
T 1c0p_A 334 GFSSAGYQQSWGAAEDVAQLVDEAF 358 (363)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchheeccHHHHHHHHHHHHH
Confidence 3568899999999999999887644
No 214
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=31.95 E-value=21 Score=34.38 Aligned_cols=28 Identities=21% Similarity=0.297 Sum_probs=21.2
Q ss_pred CCeeeeeee-cCeEEEecEEEecccCCCc
Q 016489 6 DGSKKENFQ-RGVELRGRITLLAEGCRGS 33 (388)
Q Consensus 6 dG~~~~~~~-~g~~i~Ak~vI~AdG~~s~ 33 (388)
+|.++++.+ +|.+++|+.||+|+|+.|.
T Consensus 194 ~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 194 NNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp TTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred CCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 456665544 5558999999999999863
No 215
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=31.61 E-value=43 Score=33.85 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=24.6
Q ss_pred Ceeeeee-e--cCe--EEEecEEEecccCCCccchhHHHhc
Q 016489 7 GSKKENF-Q--RGV--ELRGRITLLAEGCRGSLSEKLIKNF 42 (388)
Q Consensus 7 G~~~~~~-~--~g~--~i~Ak~vI~AdG~~s~lar~l~~~~ 42 (388)
|++.++. . +|. +|+||.||+|+|..|... ++++++
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~-~~~~~~ 321 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNK-EMIAYY 321 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCH-HHHHHH
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCH-HHHHHh
Confidence 6766553 2 564 699999999999999873 343433
No 216
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=30.03 E-value=33 Score=34.41 Aligned_cols=38 Identities=16% Similarity=-0.172 Sum_probs=31.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
..|++..+||+|..-.|.+++ .|+..|..+|+.|....
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~~ 400 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKMA 400 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHHh
Confidence 468999999999987777654 79999999999886643
No 217
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=29.97 E-value=37 Score=37.13 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=30.8
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
..+++..+||+++. .++..|+..|+.||..|...+.
T Consensus 409 s~p~IyAaGD~a~~------~~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 409 AVANQHLAGAMTGR------LDTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CCTTEEECGGGGTC------CSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCc------hhHHHHHHHHHHHHHHHHHHcC
Confidence 56899999999986 2577999999999999987664
No 218
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=29.67 E-value=43 Score=32.76 Aligned_cols=36 Identities=25% Similarity=0.171 Sum_probs=28.2
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. . ..-.+.|+..|+.||+.+..
T Consensus 304 t~~~~IyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 304 TSIPDVYAIGDVVDK-G---PMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CSSTTEEECGGGBSS-S---CSCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeccCCC-C---CccHhHHHHHHHHHHHHHcC
Confidence 356899999999984 1 23467899999999998853
No 219
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=29.65 E-value=14 Score=36.96 Aligned_cols=20 Identities=10% Similarity=-0.026 Sum_probs=17.7
Q ss_pred eEEEecEEEecccCCCccch
Q 016489 17 VELRGRITLLAEGCRGSLSE 36 (388)
Q Consensus 17 ~~i~Ak~vI~AdG~~s~lar 36 (388)
.+++|++||+|+|.+|.+.+
T Consensus 215 ~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 215 ASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp HTCCBSEEEECCCTTCCCTT
T ss_pred EEEEcCEEEECCCCCccccc
Confidence 47999999999999998854
No 220
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=29.45 E-value=33 Score=35.59 Aligned_cols=38 Identities=18% Similarity=-0.018 Sum_probs=31.0
Q ss_pred CCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 162 PGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 162 ~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
+++.++|++...-.+ .-++-|+.||..||+.|.+.+.+
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHccC
Confidence 689999999875433 45888999999999999887643
No 221
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=29.29 E-value=36 Score=34.45 Aligned_cols=42 Identities=21% Similarity=0.095 Sum_probs=34.3
Q ss_pred cccCCEEEEccCc--cc--cCCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 159 PVFPGGAIIGCAA--GF--LNVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 159 ~~~~g~lLvGDAA--G~--vdp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
..-||+..+|+++ |+ -|.+-+..+.-|+..|++||+.+.+.+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 4569999999998 33 367777888899999999999987654
No 222
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=29.24 E-value=44 Score=32.94 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=29.0
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+...+++..+||+++. ..-.+.|+..|+.||+.|..
T Consensus 315 ~t~~~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 315 TTNVSHIWAVGDVTGH-----IQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp BCSSTTEEECGGGGTS-----CCCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEEecCCC-----CcCHHHHHHHHHHHHHHHcC
Confidence 3457999999999983 24467899999999998874
No 223
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=28.26 E-value=47 Score=32.47 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=28.3
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. ..=.+.|+..|+.||+.|..
T Consensus 296 t~~~~iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 296 TSTPGIYALGDVTDR-----VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CSSTTEEECSGGGSS-----CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEEecCCC-----CCChHHHHHHHHHHHHHHcC
Confidence 456999999999983 23357899999999998864
No 224
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=28.18 E-value=39 Score=34.19 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=31.7
Q ss_pred ccCCEEEEccCccccC---CCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLN---VPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vd---p~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.-||+..+|+++|-+. =+.+-.+..||..|++||+.+.+..
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 4589999999987542 2456667889999999999887644
No 225
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=28.00 E-value=49 Score=32.78 Aligned_cols=35 Identities=20% Similarity=0.084 Sum_probs=29.0
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.. .-.+.|+..|+.||+.+..
T Consensus 303 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL-----TLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CSSTTEEECGGGGTSS-----CSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 4568999999999852 2367999999999999876
No 226
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Probab=27.95 E-value=32 Score=35.76 Aligned_cols=25 Identities=8% Similarity=-0.024 Sum_probs=18.4
Q ss_pred CCCCcccCCCCCCCccccccCCceE
Q 016489 314 PKIPELVNLPEYAGPESRYCPARVY 338 (388)
Q Consensus 314 ~~~c~~~~~~~~~~~c~~~CPa~~y 338 (388)
+.-|..|..-.+.+.|+..||.+-|
T Consensus 221 ~~~C~aC~~~~~~g~Cv~~CP~~~~ 245 (624)
T 1yy9_A 221 ESDCLVCRKFRDEATCKDTCPPLML 245 (624)
T ss_dssp TTCBSSBSSEESSSCEESSCCCSEE
T ss_pred cCcccccccCccCCcccccCCCccc
Confidence 3457777655677899999999843
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=27.95 E-value=48 Score=32.34 Aligned_cols=35 Identities=31% Similarity=0.287 Sum_probs=28.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.. .-.+.|+..|+.||+.+..
T Consensus 299 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 299 TNVGHIYAIGDVNGLL-----QLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp CSSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeECcCCCc-----cCHHHHHHHHHHHHHHhcC
Confidence 3568999999999852 2357899999999998863
No 228
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=27.69 E-value=47 Score=31.47 Aligned_cols=38 Identities=16% Similarity=0.058 Sum_probs=28.4
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
...+++..+||++.+-++. ..=.+.|+..|+.||+.+.
T Consensus 258 t~~~~IyA~GD~a~~~~~~-~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGII-AGTAKAAMEQARVLADILK 295 (367)
T ss_dssp CSSTTEEECGGGEEBTTBC-CCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeEeeeecCCCC-ccHHHHHHHHHHHHHHHhc
Confidence 3578999999999864432 1246789999999988774
No 229
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=27.04 E-value=23 Score=32.51 Aligned_cols=20 Identities=15% Similarity=0.142 Sum_probs=17.0
Q ss_pred cCeEEEecEEEecccCCCcc
Q 016489 15 RGVELRGRITLLAEGCRGSL 34 (388)
Q Consensus 15 ~g~~i~Ak~vI~AdG~~s~l 34 (388)
+|.+++++.||+|+|.++..
T Consensus 107 ~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 107 DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp SSEEEEEEEEEECCCEEECC
T ss_pred CCcEEEcCEEEECCCCCcCC
Confidence 67789999999999987543
No 230
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=27.02 E-value=43 Score=35.07 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=0.0
Q ss_pred CCCeeeee-eecCeEEEecEEEecccCCCc
Q 016489 5 KDGSKKEN-FQRGVELRGRITLLAEGCRGS 33 (388)
Q Consensus 5 ~dG~~~~~-~~~g~~i~Ak~vI~AdG~~s~ 33 (388)
++|++.++ +.+|.+++|+.||+|+|..+.
T Consensus 153 e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 153 ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred cCCEEEEEEECCCCEEECCEEEEcCCCCcc
No 231
>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A
Probab=26.54 E-value=21 Score=36.61 Aligned_cols=26 Identities=15% Similarity=-0.125 Sum_probs=20.5
Q ss_pred CCCCcccCCCCCCCccccccCCceEE
Q 016489 314 PKIPELVNLPEYAGPESRYCPARVYE 339 (388)
Q Consensus 314 ~~~c~~~~~~~~~~~c~~~CPa~~y~ 339 (388)
++.|..|..-.+.+.|+..||.+.|.
T Consensus 223 ~~~C~~C~~~~~~~~Cv~~Cp~~~~~ 248 (551)
T 3i2t_A 223 QKDCIACKNFFDEGVCKEECPPMRKY 248 (551)
T ss_dssp STTEEEESSEEETTEEESSCCCSEEE
T ss_pred ccccccchhhccCCeeeccCCchhcc
Confidence 36688887667788999999998764
No 232
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=26.30 E-value=51 Score=32.46 Aligned_cols=35 Identities=26% Similarity=0.139 Sum_probs=28.4
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. | .-.+.|+..|+.||+.|..
T Consensus 328 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 328 TSIAGVYAIGDVVRG--P---MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CSSTTEEECGGGSSS--C---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCC--c---cchhHHHHHHHHHHHHHcC
Confidence 356899999999964 2 4578999999999998753
No 233
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=26.14 E-value=52 Score=35.10 Aligned_cols=36 Identities=17% Similarity=-0.081 Sum_probs=29.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
..+++.++|++....-|- -|+-|+.||..||+.|++
T Consensus 740 ~~grL~FAGE~Ts~~~~g---tveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 740 IQGTVFFAGEATNRHFPQ---TVTGAYLSGVREASKIAA 775 (776)
T ss_dssp BTTTEEECSGGGCSSSCS---SHHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEehhhcCCCCc---CHHHHHHHHHHHHHHHHh
Confidence 457899999998765443 488899999999999875
No 234
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=26.10 E-value=57 Score=31.81 Aligned_cols=34 Identities=24% Similarity=0.082 Sum_probs=27.5
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
..|++..+||+++.. .=.+.|+..|+.||+.+..
T Consensus 308 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 308 NVSGVYAIGDVIPGP-----MLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSTTEEECSTTSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 468999999999842 2357899999999998863
No 235
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=25.85 E-value=24 Score=32.96 Aligned_cols=22 Identities=23% Similarity=0.071 Sum_probs=18.8
Q ss_pred CCccchHHHHHHHHHHHHHHHH
Q 016489 177 PKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 177 ~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+.+.|+..|..+|++.|+.|..
T Consensus 335 ~~g~G~~~ap~~g~~la~~i~~ 356 (372)
T 2uzz_A 335 LSGHGFKFASVLGEIAADFAQD 356 (372)
T ss_dssp CCSCCGGGHHHHHHHHHHHHTT
T ss_pred CCccchhccHHHHHHHHHHHhC
Confidence 5688999999999999988754
No 236
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=25.70 E-value=37 Score=34.36 Aligned_cols=40 Identities=25% Similarity=0.160 Sum_probs=31.3
Q ss_pred ccCCEEEEccCcccc---CCCCccchHHHHHHHHHHHHHHHHh
Q 016489 160 VFPGGAIIGCAAGFL---NVPKIKGTHTAMKSGMLAAEAGFGV 199 (388)
Q Consensus 160 ~~~g~lLvGDAAG~v---dp~~~~Gi~~Am~SG~lAAeai~~a 199 (388)
.-||+..+|+++|-+ |=+.+-.+..||.+|++||+.+.+.
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 358999999998754 2245666788999999999988654
No 237
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=25.10 E-value=58 Score=32.23 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=28.9
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||+++. ..=.+.|+..|+.||+.+..
T Consensus 316 t~~~~IyA~GD~~~~-----~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 316 TNVDNIYAIGDVTDR-----VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CSSTTEEECGGGGCS-----CCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccCCC-----ccCHHHHHHHHHHHHHHhcC
Confidence 457899999999974 23578999999999998874
No 238
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=24.64 E-value=62 Score=31.65 Aligned_cols=35 Identities=23% Similarity=0.114 Sum_probs=28.2
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.. .=.+.|+..|+.||+.+..
T Consensus 315 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 315 SKFPHIKVVGDVTFGP-----MLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 3468999999999852 2357999999999998864
No 239
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=24.02 E-value=63 Score=31.77 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=27.9
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. | .=.+.|+..|+.||+.+..
T Consensus 312 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGK--V---ELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CSSTTEEECGGGTTS--S---CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEecCCC--c---ccHHHHHHHHHHHHHHhcC
Confidence 456899999999874 2 2467899999999998763
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=23.77 E-value=26 Score=32.16 Aligned_cols=21 Identities=24% Similarity=0.297 Sum_probs=16.3
Q ss_pred eeecCeEEEecEEEecccCCC
Q 016489 12 NFQRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 12 ~~~~g~~i~Ak~vI~AdG~~s 32 (388)
+.+.+.+++++.||+|+|..+
T Consensus 112 v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 112 VARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp EETTSCEEEEEEEEECCCSGG
T ss_pred EEeCCCEEEeCEEEECCCCCC
Confidence 433444899999999999865
No 241
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=23.73 E-value=66 Score=31.41 Aligned_cols=35 Identities=29% Similarity=0.248 Sum_probs=28.2
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||+++.. .=.+.|+..|+.||+.|..
T Consensus 308 t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGA-----MLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 3568999999999632 2478999999999998864
No 242
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=23.71 E-value=62 Score=31.81 Aligned_cols=35 Identities=31% Similarity=0.276 Sum_probs=28.3
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. | .=.+.|+..|+.||+.+..
T Consensus 314 t~~~~IyA~GD~~~~--~---~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 314 TNVPHIYAIGDIVGQ--P---MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CSSTTEEECGGGTCS--S---CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEcccCC--C---ccHHHHHHHHHHHHHHHcC
Confidence 356899999999984 2 2367899999999998864
No 243
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=23.68 E-value=63 Score=31.46 Aligned_cols=35 Identities=26% Similarity=0.226 Sum_probs=28.2
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||+++. | .-.+.|+..|+.||+.+..
T Consensus 293 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 293 TNIEGIYAVGDNTGA--V---ELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CSSTTEEECSGGGTS--C---CCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCC--C---ccHHHHHHHHHHHHHHHcC
Confidence 456899999999874 2 3467899999999998864
No 244
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=23.53 E-value=50 Score=34.44 Aligned_cols=44 Identities=20% Similarity=0.007 Sum_probs=34.6
Q ss_pred ccccCCEEEEccCcc-cc---CCCCccchHHHHHHHHHHHHHHHHhhc
Q 016489 158 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFGVLH 201 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al~ 201 (388)
+..-||+..+|++|+ -+ |.+-+..+.-|+..|++||+.|.+.+.
T Consensus 382 ~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 382 EAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp BCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 346799999999863 23 566677788899999999999877663
No 245
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=23.40 E-value=65 Score=31.93 Aligned_cols=35 Identities=26% Similarity=0.243 Sum_probs=28.4
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||+++.. .=.+.|+..|+.||+.+..
T Consensus 320 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 320 TNVPNIYAIGDITDRL-----MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CSSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhcC
Confidence 3568999999999741 3467899999999998864
No 246
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=23.40 E-value=56 Score=33.57 Aligned_cols=43 Identities=19% Similarity=0.029 Sum_probs=33.6
Q ss_pred ccccCCEEEEccCcc-cc---CCCCccchHHHHHHHHHHHHHHHHhh
Q 016489 158 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
+..-||+..+|++|+ -+ |-+.+..+.-|+..|++||+.+.+.+
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 446799999999984 33 44555667889999999999987765
No 247
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=23.14 E-value=33 Score=35.75 Aligned_cols=36 Identities=31% Similarity=0.042 Sum_probs=29.7
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
.+++.++||+++. .-+..|+..|..||..|...+..
T Consensus 641 ~~~VyaiGD~~~~------~~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 641 IASVRGIGDAWAP------GTIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp CSEEEECGGGTSC------BCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEeCCCch------hhHHHHHHHHHHHHHHHHhhccC
Confidence 4899999999972 35667999999999999877654
No 248
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.08 E-value=47 Score=30.15 Aligned_cols=26 Identities=19% Similarity=0.121 Sum_probs=19.8
Q ss_pred CeeeeeeecCeEEEecEEEecccCCC
Q 016489 7 GSKKENFQRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 7 G~~~~~~~~g~~i~Ak~vI~AdG~~s 32 (388)
+...-...+|.++++|.||+|+|++.
T Consensus 92 ~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 92 GLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp SCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred CcEEEEECCCCEEEeCEEEEccCCcc
Confidence 33344466788999999999999853
No 249
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=22.87 E-value=65 Score=31.49 Aligned_cols=35 Identities=40% Similarity=0.454 Sum_probs=27.8
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++. | .=.+.|+..|+.||+.+..
T Consensus 299 t~~~~Iya~GD~~~~--~---~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 299 TSVPGVYAIGDAARP--P---LLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CSSTTEEECGGGTCS--S---CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCC--c---ccHHHHHHHHHHHHHHhcC
Confidence 346899999999985 2 2367899999999998853
No 250
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=22.85 E-value=71 Score=31.16 Aligned_cols=35 Identities=20% Similarity=-0.013 Sum_probs=28.5
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.- .-.+.|+..|+.||+.+..
T Consensus 299 t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 299 TSNPNIYAAGDCTDQP-----QFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CSSTTEEECSTTBSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 4578999999999852 2478999999999998753
No 251
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.71 E-value=68 Score=31.17 Aligned_cols=33 Identities=30% Similarity=0.094 Sum_probs=26.6
Q ss_pred ccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHH
Q 016489 160 VFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
..|++..+||+++.. .=.+.|+..|+.||+.+.
T Consensus 299 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 299 SVPNIFAIGDIVPGP-----ALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 468999999999842 235789999999998875
No 252
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=22.50 E-value=68 Score=31.33 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=28.1
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.. .-.+.|+..|+.||+.+..
T Consensus 310 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 310 TKIPNIYAIGDVVAGP-----MLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeecCCCC-----ccHHHHHHHHHHHHHHhcC
Confidence 3568999999999842 2357899999999998864
No 253
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=22.30 E-value=52 Score=34.33 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=29.6
Q ss_pred cCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHHhhcc
Q 016489 161 FPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFGVLHE 202 (388)
Q Consensus 161 ~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 202 (388)
-+|++++|.-.|. .|.--|..+|.+|+-.+...+.+
T Consensus 389 ~~gLf~AGqinGt------~GyeEAaaqGl~AG~nAa~~~~~ 424 (637)
T 2zxi_A 389 IRGLFHAGNFNGT------TGYEEAAGQGIVAGINAALRAFG 424 (637)
T ss_dssp SBTEEECGGGGTB------CSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeecCCc------chHHHHHHHHHHHHHHHHHHhcC
Confidence 5899999998884 68889999999999877665543
No 254
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=21.94 E-value=63 Score=32.40 Aligned_cols=20 Identities=25% Similarity=0.410 Sum_probs=17.0
Q ss_pred eecCeEEEecEEEecccCCC
Q 016489 13 FQRGVELRGRITLLAEGCRG 32 (388)
Q Consensus 13 ~~~g~~i~Ak~vI~AdG~~s 32 (388)
+++|.+++|++||+|+|..|
T Consensus 135 ~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 135 TNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp ETTCCEEEEEEEEECCCSCC
T ss_pred ECCCCEEEeCEEEECcCCCC
Confidence 45677899999999999865
No 255
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=21.89 E-value=73 Score=31.16 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=27.8
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...+++..+||+++. | .=.+.|+..|+.||+.+..
T Consensus 292 t~~~~Iya~GD~~~~--~---~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 292 TNVPGVYALGDITGR--D---QLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp CSSTTEEECGGGGTS--C---CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeecCCC--c---ccHHHHHHHHHHHHHHHcC
Confidence 356899999999874 2 3467899999999998763
No 256
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=21.86 E-value=82 Score=30.89 Aligned_cols=36 Identities=22% Similarity=0.130 Sum_probs=27.9
Q ss_pred ccccCCEEEEccCc-cccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAA-GFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAA-G~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+...+++..+||++ |. | .-.+.|+..|+.||+.|..
T Consensus 315 ~t~~~~IyA~GD~~~~~--~---~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 315 ATNVANIYAVGDIIYGK--P---ELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp BCSSTTEEECSTTBTTS--C---CCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEEcccCCC--C---ccHHHHHHHHHHHHHHHcC
Confidence 34569999999998 32 2 3468899999999998863
No 257
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=21.66 E-value=49 Score=33.57 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=31.7
Q ss_pred ccCCEEEEccCccccC---CCCccchHHHHHHHHHHHHHHHHhh
Q 016489 160 VFPGGAIIGCAAGFLN---VPKIKGTHTAMKSGMLAAEAGFGVL 200 (388)
Q Consensus 160 ~~~g~lLvGDAAG~vd---p~~~~Gi~~Am~SG~lAAeai~~al 200 (388)
.-||+..+|.++|-+. =+.+..+..||..|++||+.+.+..
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 3589999999987542 2456668889999999999987643
No 258
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=21.58 E-value=75 Score=31.05 Aligned_cols=36 Identities=22% Similarity=0.098 Sum_probs=28.5
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+...+|+..+||+++.. .=.+.|+..|+.||+.|..
T Consensus 320 ~t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 320 NTNVKGIYAVGDVCGKA-----LLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp BCSSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEEecCCCC-----ccHhHHHHHHHHHHHHHcC
Confidence 34579999999999642 3478899999999998764
No 259
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=20.65 E-value=83 Score=30.91 Aligned_cols=37 Identities=35% Similarity=0.238 Sum_probs=28.0
Q ss_pred ccccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+...|++..+||++.-- | .=.+.|+..|+.||+.|..
T Consensus 315 ~t~~~~IyA~GD~~~~~-~---~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 315 ATSVPHIYAIGDVAEGR-P---ELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp BCSSTTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEeEEecCCC-C---cchhHHHHHHHHHHHHHcC
Confidence 34568999999998411 1 3467899999999998864
No 260
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=20.41 E-value=76 Score=31.64 Aligned_cols=34 Identities=26% Similarity=0.166 Sum_probs=27.6
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGF 197 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 197 (388)
...+++..+||+++.. .=.+.|+..|+.||+.+.
T Consensus 343 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 343 TSVPNVYAVGDLIGGP-----MEMFKARKSGCYAARNVM 376 (523)
T ss_dssp CSSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeecCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 3578999999999852 236789999999998875
No 261
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=20.37 E-value=26 Score=31.77 Aligned_cols=21 Identities=14% Similarity=0.295 Sum_probs=17.2
Q ss_pred eecCeEEEecEEEecccCCCc
Q 016489 13 FQRGVELRGRITLLAEGCRGS 33 (388)
Q Consensus 13 ~~~g~~i~Ak~vI~AdG~~s~ 33 (388)
+++|.+++++.||+|+|.++.
T Consensus 95 ~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 95 AEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp ETTSCEEEEEEEEECCCEEEC
T ss_pred EcCCCEEECCEEEECCCCCCC
Confidence 456778999999999997653
No 262
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=20.22 E-value=77 Score=31.25 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=28.3
Q ss_pred cccCCEEEEccCccccCCCCccchHHHHHHHHHHHHHHHH
Q 016489 159 PVFPGGAIIGCAAGFLNVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 159 ~~~~g~lLvGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
...|++..+||+++.. .=.+.|+..|+.||+.+..
T Consensus 307 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLL-----PLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp CSSTTEEECSGGGTSC-----SCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 3568999999999852 2357899999999998864
No 263
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=20.13 E-value=29 Score=34.39 Aligned_cols=41 Identities=12% Similarity=-0.116 Sum_probs=32.5
Q ss_pred ccccCCEEEEccCcc-cc---CCCCccchHHHHHHHHHHHHHHHH
Q 016489 158 YPVFPGGAIIGCAAG-FL---NVPKIKGTHTAMKSGMLAAEAGFG 198 (388)
Q Consensus 158 ~~~~~g~lLvGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~ 198 (388)
+..-||+..+||+++ -+ |++.+..+.-|+..|+.||+.+.+
T Consensus 326 ~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 326 ESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred ccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 446799999999998 44 467777788888889999887754
Done!