BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 016490
         (388 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1OQ4|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ4|B Chain B, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ4|C Chain C, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ4|D Chain D, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ4|E Chain E, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ4|F Chain F, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Azide.
 pdb|1OQ7|A Chain A, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ7|B Chain B, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ7|C Chain C, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ7|D Chain D, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ7|E Chain E, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ7|F Chain F, The Crystal Structure Of The Iron Free (apo-)form Of
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (castor Bean).
 pdb|1OQ9|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
           Carrier Protein Desaturase From Ricinus Communis (Castor
           Bean) And Acetate.
 pdb|1OQB|A Chain A, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|1OQB|B Chain B, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|1OQB|C Chain C, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|1OQB|D Chain D, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|1OQB|E Chain E, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|1OQB|F Chain F, The Crystal Structure Of The One-iron Form Of The Di-iron
           Center In Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (castor Bean).
 pdb|2XZ0|A Chain A, The Structure Of The 2:1 (Partially Occupied) Complex
           Between Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
 pdb|2XZ0|B Chain B, The Structure Of The 2:1 (Partially Occupied) Complex
           Between Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
 pdb|2XZ0|C Chain C, The Structure Of The 2:1 (Partially Occupied) Complex
           Between Stearoyl Acyl Carrier Protein Desaturase From
           Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
 pdb|2XZ1|A Chain A, The Structure Of The 2:2 (Fully Occupied) Complex Between
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (Castor Bean) And Acyl Carrier Protein.
 pdb|2XZ1|B Chain B, The Structure Of The 2:2 (Fully Occupied) Complex Between
           Stearoyl Acyl Carrier Protein Desaturase From Ricinus
           Communis (Castor Bean) And Acyl Carrier Protein
          Length = 363

 Score =  537 bits (1383), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 292/340 (85%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 28  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 86

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 87  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 146

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFISHGNT
Sbjct: 147 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNT 206

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 207 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 266

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 267 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 326

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 327 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 363


>pdb|1AFR|A Chain A, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
 pdb|1AFR|B Chain B, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
 pdb|1AFR|C Chain C, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
 pdb|1AFR|D Chain D, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
 pdb|1AFR|E Chain E, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
 pdb|1AFR|F Chain F, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
          Length = 345

 Score =  536 bits (1381), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 251/340 (73%), Positives = 292/340 (85%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 10  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 68

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 69  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 128

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERATFISHGNT
Sbjct: 129 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERATFISHGNT 188

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 189 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 248

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 249 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 308

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 309 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 345


>pdb|2J2F|A Chain A, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
 pdb|2J2F|B Chain B, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
 pdb|2J2F|C Chain C, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
 pdb|2J2F|D Chain D, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
 pdb|2J2F|E Chain E, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
 pdb|2J2F|F Chain F, The T199d Mutant Of Stearoyl Acyl Carrier Protein
           Desaturase From Ricinus Communis (Castor Bean)
          Length = 363

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 250/340 (73%), Positives = 291/340 (85%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WAE N+L+HLKPV+K WQP DFLP+  AS+GF EQV+ELRER
Sbjct: 28  VTHSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDP-ASDGFDEQVRELRER 86

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTYQTMLN+LDGVRDETGAS TSWA W RAWTAEENRH
Sbjct: 87  AKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENRH 146

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM+QIE++IQYLI SGMD + EN+PY GF+Y SFQERA FISHGNT
Sbjct: 147 GDLLNKYLYLSGRVDMRQIEKTIQYLIGSGMDPRTENSPYLGFIYTSFQERADFISHGNT 206

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           AR  KEHGD+KLAQICGTIA+DEKRHETAYTKIVEKLFEIDPD T+LA A MM+K+  MP
Sbjct: 207 ARQAKEHGDIKLAQICGTIAADEKRHETAYTKIVEKLFEIDPDGTVLAFADMMRKKISMP 266

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG+DD  FDHFSAV QRLGVYT +DYADILEFL+ RW V+KL GL++EG+KAQD+
Sbjct: 267 AHLMYDGRDDNLFDHFSAVAQRLGVYTAKDYADILEFLVGRWKVDKLTGLSAEGQKAQDY 326

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC LP RIRR LE +A      K    +PFSW+F +++++
Sbjct: 327 VCRLPPRIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 363


>pdb|2UW1|A Chain A, Ivy Desaturase Structure
          Length = 338

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 226/340 (66%), Positives = 276/340 (81%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WA +NVLIHLK V+KSWQP D+LP+   S+GF EQV+ELRER
Sbjct: 3   VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDP-VSDGFEEQVRELRER 61

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTY +MLN  DG++DETGA  ++WA W RAWTAEENRH
Sbjct: 62  AKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRH 121

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM++IE++IQYLI SGMD K EN+PY GF+Y SFQERATFISH NT
Sbjct: 122 GDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANT 181

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           A+L + +GD KLA ICG+IASDEKRH TAYTKIVEKL EIDPD T++A A MM+K+  MP
Sbjct: 182 AKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMP 241

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG D+  F HF+AV QRLGVY+  DY DILEFL+ +W VE+L GL+ EGRKAQ++
Sbjct: 242 AHLMYDGSDELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEY 301

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC L  +IRR LE +A      K    +PFSW+F +++++
Sbjct: 302 VCELGPKIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 338


>pdb|2UW1|B Chain B, Ivy Desaturase Structure
          Length = 338

 Score =  479 bits (1232), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/340 (65%), Positives = 274/340 (80%), Gaps = 4/340 (1%)

Query: 49  VTHSMAPEKVEIFKSLETWAEHNVLIHLKPVDKSWQPTDFLPESEASEGFFEQVKELRER 108
           VTHSM P+K+EIFKSL+ WA +NVLIHLK V+KSWQP D+LP+   S+GF EQV+ELRER
Sbjct: 3   VTHSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDP-VSDGFEEQVRELRER 61

Query: 109 CKQLPAEYFVVLVGEMITEEALPTYQTMLNSLDGVRDETGASLTSWATWIRAWTAEENRH 168
            K++P +YFVVLVG+MITEEALPTY +MLN  DG++DETGA  ++WA W RAWTAEENRH
Sbjct: 62  AKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENRH 121

Query: 169 GDLLNKYLYLSGRVDMKQIERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNT 228
           GDLLNKYLYLSGRVDM++IE++IQYLI SGMD K EN+PY GF+Y SFQERATFISH NT
Sbjct: 122 GDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHANT 181

Query: 229 ARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDDTILALAGMMKKRFRMP 288
           A+L +  GD  LA ICG+IASDEKRH TAYTKIVEKL EIDPD T++A A MM+K+  MP
Sbjct: 182 AKLAQHWGDKNLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKITMP 241

Query: 289 GHLMYDGQDDKTFDHFSAVTQRLGVYTGQDYADILEFLIKRWGVEKLVGLTSEGRKAQDF 348
            HLMYDG D+  F HF+AV QR+GVY+  DY DILEFL+ +W VE+L GL+ EGRKAQ++
Sbjct: 242 AHLMYDGSDELLFKHFTAVAQRVGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEY 301

Query: 349 VCGLPSRIRRILENKALVDMAEKAGSAVPFSWVFGQEIRI 388
           VC L  +IRR LE +A      K    +PFSW+F +++++
Sbjct: 302 VCELGPKIRR-LEERA--QGRAKEAPTMPFSWIFDRQVKL 338


>pdb|1ZA0|A Chain A, X-Ray Structure Of Putative Acyl-Acp Desaturase Desa2 From
           Mycobacterium Tuberculosis H37rv
          Length = 275

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 154 WATWIRAWTAEENRHGDLLNKYLYLSGRVD-MKQIERSIQYLIRSGMDHKFENNPYNGFV 212
           W  W+  WTAEE+ H   L +YL ++  VD +   +  +Q++++     K+        V
Sbjct: 96  WGRWLGRWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKY--TQVETLV 153

Query: 213 YASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKLFEIDPDD 272
           Y +F ER   +   N A  ++E     LA +   IA DE RHE  +  +V    +   D+
Sbjct: 154 YMAFYERCGAVFCRNLAAQIEE---PILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDE 210

Query: 273 T 273
           T
Sbjct: 211 T 211


>pdb|2JD6|0 Chain 0, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|1 Chain 1, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|2 Chain 2, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|3 Chain 3, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|4 Chain 4, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|5 Chain 5, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|6 Chain 6, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|7 Chain 7, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|8 Chain 8, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|9 Chain 9, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|A Chain A, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|B Chain B, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|C Chain C, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|D Chain D, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|E Chain E, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|F Chain F, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|G Chain G, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|H Chain H, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|I Chain I, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|J Chain J, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|K Chain K, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|L Chain L, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|M Chain M, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|N Chain N, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|O Chain O, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|P Chain P, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|Q Chain Q, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|R Chain R, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|S Chain S, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|T Chain T, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|U Chain U, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|V Chain V, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|W Chain W, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|X Chain X, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|Y Chain Y, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD6|Z Chain Z, Crystal Structure Of The As Isolated Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|0 Chain 0, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|1 Chain 1, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|2 Chain 2, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|3 Chain 3, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|4 Chain 4, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|5 Chain 5, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|6 Chain 6, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|7 Chain 7, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|8 Chain 8, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|9 Chain 9, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|A Chain A, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|B Chain B, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|C Chain C, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|D Chain D, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|E Chain E, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|F Chain F, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|G Chain G, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|H Chain H, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|I Chain I, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|J Chain J, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|K Chain K, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|L Chain L, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|M Chain M, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|N Chain N, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|O Chain O, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|P Chain P, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|Q Chain Q, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|R Chain R, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|S Chain S, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|T Chain T, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|U Chain U, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|V Chain V, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|W Chain W, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|X Chain X, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|Y Chain Y, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD7|Z Chain Z, Crystal Structure Of The Fe-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|0 Chain 0, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|1 Chain 1, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|2 Chain 2, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|3 Chain 3, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|4 Chain 4, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|5 Chain 5, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|6 Chain 6, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|7 Chain 7, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|8 Chain 8, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|9 Chain 9, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|A Chain A, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|B Chain B, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|C Chain C, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|D Chain D, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|E Chain E, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|F Chain F, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|G Chain G, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|H Chain H, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|I Chain I, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|J Chain J, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|K Chain K, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|L Chain L, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|M Chain M, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|N Chain N, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|O Chain O, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|P Chain P, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|Q Chain Q, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|R Chain R, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|S Chain S, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|T Chain T, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|U Chain U, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|V Chain V, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|W Chain W, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|X Chain X, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|Y Chain Y, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
 pdb|2JD8|Z Chain Z, Crystal Structure Of The Zn-Soaked Ferritin From The
           Hyperthermophilic Archaeal Anaerobe Pyrococcus Furiosus
          Length = 174

 Score = 34.3 bits (77), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 13/149 (8%)

Query: 151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYN 209
           L  +A W++A   EE  H      Y+Y  +GRV++ +I +            K   +P  
Sbjct: 36  LEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKP----------PKEWESPLK 85

Query: 210 GFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL-FEI 268
            F  A   E+    S    A L +E  D           +++   E +  KI++KL F  
Sbjct: 86  AFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLKFAK 145

Query: 269 DPDDTILALAGMMKKRF-RMPGHLMYDGQ 296
           D    +  L   +  R  ++PG LM  G+
Sbjct: 146 DSPQILFMLDKELSARAPKLPGLLMQGGE 174


>pdb|3N05|A Chain A, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
           Streptomyces Avermitilis
 pdb|3N05|B Chain B, Crystal Structure Of Nh3-Dependent Nad+ Synthetase From
           Streptomyces Avermitilis
          Length = 590

 Score = 33.9 bits (76), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 213 YASFQERATFISHGNTARLVKEHG-DMKLAQICGTIASDEKRHETAYT-------KIVEK 264
           Y  F E   F+  G+T  +V+ HG D+ LA IC  +  D  R   A +        +   
Sbjct: 133 YGVFDEFRYFVP-GDTMPIVRLHGVDIALA-ICEDLWQDGGRVPAARSAGAGLLLSVNAS 190

Query: 265 LFEIDPDDTILALAGMMKKRFRMPGH-----LMYDGQDDKTFDHFSAVTQRLG 312
            +E D DDT L L   ++KR +  G       M  GQD+  FD  S V  R G
Sbjct: 191 PYERDKDDTRLEL---VRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDG 240


>pdb|2X17|0 Chain 0, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|1 Chain 1, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|2 Chain 2, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|3 Chain 3, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|4 Chain 4, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|5 Chain 5, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|6 Chain 6, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|7 Chain 7, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|8 Chain 8, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|9 Chain 9, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|G Chain G, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|H Chain H, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|I Chain I, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|J Chain J, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|K Chain K, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|L Chain L, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|M Chain M, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|N Chain N, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|O Chain O, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|P Chain P, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|Q Chain Q, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|R Chain R, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|Y Chain Y, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
 pdb|2X17|Z Chain Z, The X-Ray Structure Of Ferritin From Pyrococcus Furiosus
           Loaded With Ag(I)
          Length = 173

 Score = 33.5 bits (75), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 13/148 (8%)

Query: 151 LTSWATWIRAWTAEENRHGDLLNKYLY-LSGRVDMKQIERSIQYLIRSGMDHKFENNPYN 209
           L  +A W++A   EE  H      Y+Y  +GRV++ +I +            K   +P  
Sbjct: 36  LEGFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKP----------PKEWESPLK 85

Query: 210 GFVYASFQERATFISHGNTARLVKEHGDMKLAQICGTIASDEKRHETAYTKIVEKL-FEI 268
            F  A   E+    S    A L +E  D           +++   E +  KI++KL F  
Sbjct: 86  AFEAAYEHEKFISKSIYELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKILDKLKFAK 145

Query: 269 DPDDTILALAGMMKKRF-RMPGHLMYDG 295
           D    +  L   +  R  ++PG LM  G
Sbjct: 146 DSPQILFMLDKELSARAPKLPGLLMQGG 173


>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
           Hb8
 pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
           Hb8
 pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
           Hb8
 pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
           Hb8
          Length = 515

 Score = 30.0 bits (66), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 29/141 (20%)

Query: 99  FEQVKELRERCKQLPAEYFVVLVGEMITEEA---LPTYQTMLNSLDGVRDETG------- 148
           +E ++E+R R K+ PA +F+   GE +  E+    P+     N + GV    G       
Sbjct: 12  WETIEEVRRRLKERPALHFI--AGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRA 69

Query: 149 --ASLTSWATWIRAWTAEENRH----GDLLNKY---LYLSGRVDMKQIERSIQYLIRSGM 199
             A+  ++  W R    E  R+     +L+ K+   L +   +D  Q+ R    ++R+ +
Sbjct: 70  AKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLR----IVRAQV 125

Query: 200 DHKFENNPYNGFVYASFQERA 220
               EN  +    YA + E A
Sbjct: 126 ARAAENFAF----YAEYAEHA 142


>pdb|1YCD|A Chain A, Crystal Structure Of Yeast Fsh1/yhr049w, A Member Of The
           Serine Hydrolase Family
 pdb|1YCD|B Chain B, Crystal Structure Of Yeast Fsh1/yhr049w, A Member Of The
           Serine Hydrolase Family
          Length = 243

 Score = 28.9 bits (63), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 188 ERSIQYLIRSGMDHKFENNPYNGFVYASFQERATFISHGNTARLVKEHGDMKLA-QICGT 246
           E  I   ++S +DH   N PY+G V  S     + I     + LV +H   K++  I G 
Sbjct: 83  ELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGY 142

Query: 247 IASDEKRHETAYTKIVEKL---FEIDPD 271
             ++         +I EK    F + PD
Sbjct: 143 SFTEPDPEHPGELRITEKFRDSFAVKPD 170


>pdb|3NWO|A Chain A, Crystal Structure Of Proline Iminopeptidase Mycobacterium
           Smegmatis
          Length = 330

 Score = 28.5 bits (62), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 14/84 (16%)

Query: 22  YRRSIIRTKSSPPALMCSTLGAETKDVVTHSM-APEKVEIFKSLETWA--------EHNV 72
           YRR + R   +P     S    E +  V H+M  P +  +  +L  W+           V
Sbjct: 207 YRRHVCRVVPTPQDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTAPV 266

Query: 73  LI----HLKPVDKSWQP-TDFLPE 91
           L+    H +   K+WQP  D +P+
Sbjct: 267 LVIAGEHDEATPKTWQPFVDHIPD 290


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.135    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,869,239
Number of Sequences: 62578
Number of extensions: 502261
Number of successful extensions: 1224
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1204
Number of HSP's gapped (non-prelim): 18
length of query: 388
length of database: 14,973,337
effective HSP length: 101
effective length of query: 287
effective length of database: 8,652,959
effective search space: 2483399233
effective search space used: 2483399233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)